AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1199710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199710 MtrunA17_Chr8g0369161 90.909 407 2 2 1 382 1 397 0.0 736
Msa1199710 MtrunA17_Chr5g0410531 66.829 410 88 7 1 382 1 390 0.0 512
Msa1199710 MtrunA17_Chr7g0275321 36.335 322 163 11 40 359 67 348 5.94e-42 152
Msa1199710 MtrunA17_Chr8g0373571 38.757 338 139 13 28 359 52 327 5.69e-40 144
Msa1199710 MtrunA17_Chr8g0347741 30.597 402 199 16 1 370 1 354 2.57e-29 117
Msa1199710 MtrunA17_Chr1g0155551 42.105 76 41 1 287 362 26 98 4.40e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199710 AT2G35530.1 58.603 401 113 9 1 368 1 381 4.45e-142 410
Msa1199710 AT1G32150.1 52.798 411 125 10 1 375 1 378 7.87e-118 347
Msa1199710 AT4G36730.1 36.826 334 116 12 31 362 52 292 4.89e-40 144
Msa1199710 AT4G36730.2 36.826 334 114 12 31 362 52 290 1.26e-39 143
Msa1199710 AT2G46270.1 32.931 331 146 12 38 359 63 326 5.06e-31 122
Msa1199710 AT2G46270.3 32.931 331 146 12 38 359 63 326 5.06e-31 122
Msa1199710 AT2G46270.2 60.563 71 28 0 289 359 233 303 2.38e-20 91.7
Msa1199710 AT2G46270.4 60.563 71 28 0 289 359 233 303 2.38e-20 91.7
Msa1199710 AT4G01120.1 46.392 97 49 2 263 359 223 316 8.26e-18 84.3
Msa1199710 AT1G75390.1 40.217 92 51 2 271 362 22 109 5.56e-11 61.2
Msa1199710 AT3G30530.1 46.377 69 37 0 294 362 81 149 9.26e-11 60.8

Find 183 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATAAATTAAAAGAATTT+AGG 0.111572 8_1:+51933870 None:intergenic
AACAATAACTTGTTGCTATT+TGG 0.113323 8_1:+51927733 None:intergenic
TATATGGATTGTCGTGCTTC+TGG 0.172226 8_1:-51927481 Msa1199710:three_prime_UTR
TTTGGGAGAGATGAGGAATT+AGG 0.197424 8_1:+51933919 None:intergenic
TAAATATAGGAATGGATTAT+TGG 0.202244 8_1:-51928671 Msa1199710:CDS
TAGGAAGAGGAATGAAAATT+TGG 0.220363 8_1:+51933901 None:intergenic
CAAAAGATCAAAAGGAAGTT+TGG 0.253367 8_1:-51930720 Msa1199710:CDS
TAATAAATTAAAAGAATTTA+GGG 0.267264 8_1:+51933871 None:intergenic
AAATATAGGAATGGATTATT+GGG 0.271774 8_1:-51928670 Msa1199710:CDS
GATTGGTCATATGTAATATT+AGG 0.278488 8_1:-51927675 Msa1199710:three_prime_UTR
CAGGGCTCTCAATTGAAATT+CGG 0.286966 8_1:-51928964 Msa1199710:CDS
AAAGGCGGAAGCAGTCTAAT+AGG 0.287126 8_1:-51928426 Msa1199710:CDS
CCTGAGCAATGTCCATTATA+TGG 0.291222 8_1:-51927497 Msa1199710:three_prime_UTR
TTGGGAGAGATGAGGAATTA+GGG 0.301520 8_1:+51933920 None:intergenic
AAGAATTTAGGGTATGTAAT+AGG 0.306567 8_1:+51933882 None:intergenic
ACCTGATAGTTAGCCCATTC+GGG 0.308959 8_1:+51932673 None:intergenic
CACCCACATGCTGATCATTC+TGG 0.309794 8_1:+51927851 None:intergenic
TTCTGGGCAAATAATTCTTC+AGG 0.315345 8_1:-51927464 Msa1199710:three_prime_UTR
GGCATGGCATAAGGACTAAA+AGG 0.316452 8_1:+51930963 None:intergenic
GGTTTGGGTTTGTTGGTGAT+TGG 0.324158 8_1:+51933941 None:intergenic
GGTCCTCTCACAACAGTTCC+TGG 0.329718 8_1:-51928708 Msa1199710:CDS
CAAATTGTAATCACCAAGTA+TGG 0.337284 8_1:+51927238 None:intergenic
AACCTGATAGTTAGCCCATT+CGG 0.339192 8_1:+51932672 None:intergenic
GAATTAGGGTTTGGGTTTGT+TGG 0.346780 8_1:+51933934 None:intergenic
GGCTGTGCAGGGTGTTCATT+AGG 0.348545 8_1:-51927800 Msa1199710:three_prime_UTR
TACCAAGGAACGAGGATCTT+GGG 0.357041 8_1:-51927879 Msa1199710:CDS
TTCAAACTACAATTAGCTAA+TGG 0.360592 8_1:+51927292 None:intergenic
GTCGTACCTATGTCCGTTGC+TGG 0.362082 8_1:-51928729 Msa1199710:CDS
AGGAAGAGGAATGAAAATTT+GGG 0.367479 8_1:+51933902 None:intergenic
ACAGATGACCCGGCTCAAAA+TGG 0.372671 8_1:-51928816 Msa1199710:intron
AGAGATGAGGAATTAGGGTT+TGG 0.374414 8_1:+51933925 None:intergenic
GTACCTTCTACTGCAGTTGC+TGG 0.379295 8_1:-51928606 Msa1199710:CDS
ACACCAGGGGCATCTGCTAA+TGG 0.392485 8_1:-51930653 Msa1199710:CDS
GGCAGTTCAGTACCTCAAAA+TGG 0.396437 8_1:-51928795 Msa1199710:CDS
ATATGGATTGTCGTGCTTCT+GGG 0.397310 8_1:-51927480 Msa1199710:three_prime_UTR
TGGTTAGACAGAGGCTGTGC+AGG 0.398212 8_1:-51927812 Msa1199710:three_prime_UTR
TTCAAATTCAACTCCATACT+TGG 0.399435 8_1:-51927251 None:intergenic
AATTTGAACTATAATCCGTT+TGG 0.400092 8_1:+51927266 None:intergenic
AAAAGATCAAAAGGAAGTTT+GGG 0.400644 8_1:-51930719 Msa1199710:CDS
TAGGTACGACAGACATAGTT+TGG 0.407072 8_1:+51928742 None:intergenic
GTAGCAGCTGGAGGCGTCTT+AGG 0.407423 8_1:+51932829 None:intergenic
GGTACCTTTCCGTGCATTGC+AGG 0.416480 8_1:+51928624 None:intergenic
CCATCAGCTTCACTGCTGCC+TGG 0.418689 8_1:+51930776 None:intergenic
TCTGCTGCATCAAATGTTAG+TGG 0.423393 8_1:-51927550 Msa1199710:three_prime_UTR
AAGCACGACAATCCATATAA+TGG 0.433298 8_1:+51927485 None:intergenic
CCCACTACTAACTTAAATAT+AGG 0.436455 8_1:-51928684 Msa1199710:CDS
CCTCCAGCAACTGCAGTAGA+AGG 0.438361 8_1:+51928603 None:intergenic
AGGGCTCTCAATTGAAATTC+GGG 0.440159 8_1:-51928963 Msa1199710:CDS
GAGATGAGGAATTAGGGTTT+GGG 0.441970 8_1:+51933926 None:intergenic
CTTTCCGTGCATTGCAGGAA+TGG 0.449485 8_1:+51928629 None:intergenic
ATACCAAGGAACGAGGATCT+TGG 0.451531 8_1:-51927880 Msa1199710:CDS
TCCCCAAGATCCTCGTTCCT+TGG 0.452226 8_1:+51927877 None:intergenic
GAAGCATCCACCATACCATT+TGG 0.458336 8_1:+51930936 None:intergenic
AGGATGTGGTGGGGTGCCAT+AGG 0.459399 8_1:+51931159 None:intergenic
ATGGTGTTCATTCACAACTT+TGG 0.464556 8_1:-51928557 Msa1199710:CDS
TGGGGATACATTGCGACATA+AGG 0.466717 8_1:+51931139 None:intergenic
TTACAAATGACGGATCATAT+AGG 0.467203 8_1:+51927642 None:intergenic
TTACCAATCAAAAGATCAAA+AGG 0.467549 8_1:-51930728 Msa1199710:CDS
CTCTCCGTGCTGAACTGAGC+CGG 0.468290 8_1:-51928229 Msa1199710:CDS
AAGGCGGAAGCAGTCTAATA+GGG 0.468971 8_1:-51928425 Msa1199710:CDS
TCTCGTATTCACTCTTGATC+CGG 0.469532 8_1:+51928210 None:intergenic
TGTCACAGAACTTACATTCT+GGG 0.470894 8_1:+51930281 None:intergenic
AACATTTGATGCAGCAGATA+AGG 0.471934 8_1:+51927555 None:intergenic
ATTGAAATTCGGGGAGAGGC+AGG 0.472798 8_1:-51928953 Msa1199710:CDS
CCTATATTTAAGTTAGTAGT+GGG 0.472827 8_1:+51928684 None:intergenic
TCATTCACAACTTTGGCTAC+AGG 0.473534 8_1:-51928550 Msa1199710:intron
GCTCATGATTTCGTACAGAT+AGG 0.474666 8_1:+51932888 None:intergenic
TAGATCCAGGTTGCGAAAGC+AGG 0.478690 8_1:-51928392 Msa1199710:intron
GCCCATTCGGGGTTAACTGC+CGG 0.479117 8_1:+51932685 None:intergenic
TATGCCATGCCTTCTCCAAA+TGG 0.479292 8_1:-51930951 Msa1199710:CDS
TATTACCTGCTTTCGCAACC+TGG 0.480316 8_1:+51928387 None:intergenic
GAGCAGTCTTCAACGACAAC+CGG 0.480478 8_1:-51932712 Msa1199710:CDS
TGGTTAACTATTAGGATGAA+AGG 0.486053 8_1:-51928462 Msa1199710:intron
CTAATGGAATTCATTCCAAA+AGG 0.489473 8_1:-51930637 Msa1199710:intron
TGATAAAACGTTAAAAGAAA+AGG 0.490283 8_1:-51932854 Msa1199710:CDS
TTTGGAGAAGGCATGGCATA+AGG 0.491615 8_1:+51930954 None:intergenic
TACTGCAGTTGCTGGAGGAA+TGG 0.496681 8_1:-51928598 Msa1199710:CDS
GGGAATCTGCACGTAGATCC+AGG 0.502140 8_1:-51928405 Msa1199710:CDS
GCCTCCAGCTGCTACGTCAC+AGG 0.506976 8_1:-51932821 Msa1199710:intron
CCATATAATGGACATTGCTC+AGG 0.509894 8_1:+51927497 None:intergenic
GGTTAACTATTAGGATGAAA+GGG 0.512619 8_1:-51928461 Msa1199710:intron
TTAGGGTATGTAATAGGAAG+AGG 0.513091 8_1:+51933888 None:intergenic
GTTTGGTTAACAACTGTATG+AGG 0.514834 8_1:+51928759 None:intergenic
TGGTTCTACAGGAGAGACTC+GGG 0.517448 8_1:-51927906 Msa1199710:intron
TGCTCATCCATCCATGCCTC+CGG 0.518685 8_1:-51931104 Msa1199710:CDS
GGATGTGGTGGGGTGCCATA+GGG 0.518948 8_1:+51931160 None:intergenic
GGGGTTAACTGCCGGAGTAC+CGG 0.520435 8_1:+51932693 None:intergenic
CTCAATTGAAATTCGGGGAG+AGG 0.522210 8_1:-51928957 Msa1199710:CDS
CTCCGGCAGTTAACCCCGAA+TGG 0.525253 8_1:-51932687 Msa1199710:CDS
GCTGGAGGAATGGTTAATGC+TGG 0.526040 8_1:-51928588 Msa1199710:CDS
CAGCATATGATGCCTCCCTA+TGG 0.528530 8_1:-51931175 Msa1199710:CDS
AAGTATACCGGAGGCATGGA+TGG 0.528640 8_1:+51931097 None:intergenic
TCCTATATTTAAGTTAGTAG+TGG 0.530842 8_1:+51928683 None:intergenic
AGATTTCAAAATCACCTTGA+GGG 0.533419 8_1:+51928166 None:intergenic
CGAGGAATGAATGAGTTGTC+CGG 0.533967 8_1:+51933974 None:intergenic
TCTGGGCAAATAATTCTTCA+GGG 0.534405 8_1:-51927463 Msa1199710:three_prime_UTR
TTGTAGTTTGAAACTCCAAA+CGG 0.538703 8_1:-51927281 Msa1199710:three_prime_UTR
GCAAGATAAATTACAAATGA+CGG 0.538967 8_1:+51927632 None:intergenic
TTCAACGACAACCGGTACTC+CGG 0.540490 8_1:-51932704 Msa1199710:CDS
AAGACCTGTGACGTAGCAGC+TGG 0.543721 8_1:+51932817 None:intergenic
AAAATTATATCAAAGTCGAT+TGG 0.544121 8_1:-51927692 Msa1199710:three_prime_UTR
GACATGCAGGGGAATACTCC+AGG 0.547866 8_1:-51930794 Msa1199710:intron
TGTGGTGGGGTGCCATAGGG+AGG 0.551298 8_1:+51931163 None:intergenic
GTACACTTGGCAGTGCTACT+CGG 0.551358 8_1:+51934004 None:intergenic
AGAGGACCAGCAACGGACAT+AGG 0.552788 8_1:+51928723 None:intergenic
TGTTGGTGATTGGTGAGTCA+CGG 0.553827 8_1:+51933951 None:intergenic
GCAAGTGAAGGCACTAGTGA+AGG 0.553916 8_1:-51930318 Msa1199710:CDS
TACCGTTGGGGAATCGTCAA+AGG 0.559545 8_1:+51933787 None:intergenic
TCCGGCAGTTAACCCCGAAT+GGG 0.560162 8_1:-51932686 Msa1199710:CDS
TTGCTGTATTACAGATGACC+CGG 0.563684 8_1:-51928826 Msa1199710:intron
TTAGAATGTGTGCGATATGT+AGG 0.568845 8_1:-51927366 Msa1199710:three_prime_UTR
AATGATCAGCATGTGGGTGA+AGG 0.569522 8_1:-51927847 Msa1199710:CDS
CTGCATCAAATGTTAGTGGT+TGG 0.570159 8_1:-51927546 Msa1199710:three_prime_UTR
ACCAAGGAACGAGGATCTTG+GGG 0.570685 8_1:-51927878 Msa1199710:CDS
TACTAACTTAAATATAGGAA+TGG 0.572861 8_1:-51928679 Msa1199710:CDS
TCCACCATTCCTGCAATGCA+CGG 0.574091 8_1:-51928633 Msa1199710:CDS
TATGGTCTACGAAAGTATAC+CGG 0.574945 8_1:+51931085 None:intergenic
CCTGAAAAGCAACATCAAGA+AGG 0.575372 8_1:+51927768 None:intergenic
TGGTAAACCTCATGAGGTGA+AGG 0.575725 8_1:-51930756 Msa1199710:CDS
TTCTGAGAATGCTTCCCTCA+AGG 0.576301 8_1:-51928180 Msa1199710:intron
TCCGTGCATTGCAGGAATGG+TGG 0.577552 8_1:+51928632 None:intergenic
AGGAACGAGGATCTTGGGGA+GGG 0.579743 8_1:-51927874 Msa1199710:CDS
GTCCGGCGTCGATGTACACT+TGG 0.580386 8_1:+51933991 None:intergenic
AATATAGGAATGGATTATTG+GGG 0.584542 8_1:-51928669 Msa1199710:CDS
CACCTTTGACGATTCCCCAA+CGG 0.584619 8_1:-51933789 Msa1199710:intron
TTGGTTCTACAGGAGAGACT+CGG 0.589648 8_1:-51927907 Msa1199710:intron
AATGAGCTTGGTAAAACACC+AGG 0.590812 8_1:-51930668 Msa1199710:CDS
CATGCCTTCTCCAAATGGTA+TGG 0.591308 8_1:-51930946 Msa1199710:CDS
GCTCAGTTCAGCACGGAGAG+AGG 0.592194 8_1:+51928232 None:intergenic
ACGAAAGTATACCGGAGGCA+TGG 0.593534 8_1:+51931093 None:intergenic
ATTGCGACATAAGGATGTGG+TGG 0.595851 8_1:+51931148 None:intergenic
TCACACTCTACCTACAATCC+AGG 0.598954 8_1:+51927591 None:intergenic
GCAGGAATGGTGGATGAAGT+TGG 0.599117 8_1:+51928642 None:intergenic
CTGGAGGAATGGTTAATGCT+GGG 0.601036 8_1:-51928587 Msa1199710:CDS
ATGAAAATTTGGGAGAGATG+AGG 0.602109 8_1:+51933912 None:intergenic
TACATTGCGACATAAGGATG+TGG 0.605542 8_1:+51931145 None:intergenic
CCTTCTACTGCAGTTGCTGG+AGG 0.607589 8_1:-51928603 Msa1199710:CDS
AAGTTTGGGTAGTTCAAACA+TGG 0.608623 8_1:-51930705 Msa1199710:CDS
TTTAAGTTAGTAGTGGGACC+AGG 0.608854 8_1:+51928690 None:intergenic
GATGAGCATATATGCCACCA+TGG 0.610974 8_1:+51931119 None:intergenic
GGGCCAGAATGATCAGCATG+TGG 0.612197 8_1:-51927854 Msa1199710:CDS
CATACCATTTGGAGAAGGCA+TGG 0.613312 8_1:+51930947 None:intergenic
ATTCCATTAGCAGATGCCCC+TGG 0.621104 8_1:+51930650 None:intergenic
CATTCCTGCAATGCACGGAA+AGG 0.621782 8_1:-51928628 Msa1199710:CDS
TGTTGTGAGAGGACCAGCAA+CGG 0.626942 8_1:+51928716 None:intergenic
ATGAGCATATATGCCACCAT+GGG 0.627162 8_1:+51931120 None:intergenic
GGTTAGACAGAGGCTGTGCA+GGG 0.627815 8_1:-51927811 Msa1199710:three_prime_UTR
GCCTTCTCCAAATGGTATGG+TGG 0.630900 8_1:-51930943 Msa1199710:CDS
CCAGGCAGCAGTGAAGCTGA+TGG 0.631933 8_1:-51930776 Msa1199710:CDS
GTTAATGCTGGGCCACGAGA+TGG 0.632506 8_1:-51928576 Msa1199710:CDS
GAATCGTCAAAGGTGAAGCA+TGG 0.632687 8_1:+51933797 None:intergenic
TGAACTAGCTCAGCGTGCTG+AGG 0.634295 8_1:-51928273 Msa1199710:CDS
AGAGACTCGGGGAGATACCA+AGG 0.637623 8_1:-51927894 Msa1199710:CDS
ACCTGTGACGTAGCAGCTGG+AGG 0.642344 8_1:+51932820 None:intergenic
TTGCGACATAAGGATGTGGT+GGG 0.644911 8_1:+51931149 None:intergenic
TGCCAAGTGTACATCGACGC+CGG 0.645680 8_1:-51933993 Msa1199710:five_prime_UTR
TCCACCATACCATTTGGAGA+AGG 0.648739 8_1:+51930942 None:intergenic
GGCCAGAATGATCAGCATGT+GGG 0.651767 8_1:-51927853 Msa1199710:CDS
TGTAGGTAGAGTGTGAACAC+TGG 0.652258 8_1:-51927584 Msa1199710:three_prime_UTR
TATGTCGCAATGTATCCCCA+TGG 0.658011 8_1:-51931136 Msa1199710:CDS
AAAGGGAGCTTAAACGACAA+AGG 0.658178 8_1:-51928444 Msa1199710:CDS
GGACCAGGAACTGTTGTGAG+AGG 0.660532 8_1:+51928705 None:intergenic
ATGAGATGAAATTACCGTTG+GGG 0.660551 8_1:+51933775 None:intergenic
GGTGAAGGCACTCAATAGAG+TGG 0.662278 8_1:-51927832 Msa1199710:exon
CCTGATAGTTAGCCCATTCG+GGG 0.666618 8_1:+51932674 None:intergenic
AAGGAACGAGGATCTTGGGG+AGG 0.668920 8_1:-51927875 Msa1199710:CDS
CGGGGAGATACCAAGGAACG+AGG 0.670652 8_1:-51927887 Msa1199710:CDS
ATGAGCTTGGTAAAACACCA+GGG 0.672813 8_1:-51930667 Msa1199710:CDS
GGGCTCTCAATTGAAATTCG+GGG 0.673030 8_1:-51928962 Msa1199710:CDS
GTTGGTTGAACTAAGAAATG+CGG 0.673819 8_1:-51927528 Msa1199710:three_prime_UTR
AGCTGATGGTAAACCTCATG+AGG 0.683457 8_1:-51930762 Msa1199710:CDS
TGTGAATGAACACCATCTCG+TGG 0.684340 8_1:+51928564 None:intergenic
GTCGCAATGTATCCCCATGG+TGG 0.685770 8_1:-51931133 Msa1199710:CDS
GTGATTGGTGAGTCACGGCG+AGG 0.691828 8_1:+51933956 None:intergenic
TGATCCGGCTCAGTTCAGCA+CGG 0.693436 8_1:+51928225 None:intergenic
TCAATAGAGTGGTTAGACAG+AGG 0.698282 8_1:-51927821 Msa1199710:exon
GGGAGCTTAAACGACAAAGG+CGG 0.710557 8_1:-51928441 Msa1199710:CDS
AGTGGTGAGAGTGCAAGTGA+AGG 0.711216 8_1:-51930330 Msa1199710:CDS
GGTCTACGAAAGTATACCGG+AGG 0.723972 8_1:+51931088 None:intergenic
GGTTCTACAGGAGAGACTCG+GGG 0.726395 8_1:-51927905 Msa1199710:intron
TGAGCTTGGTAAAACACCAG+GGG 0.727883 8_1:-51930666 Msa1199710:CDS
TGAGCATATATGCCACCATG+GGG 0.728314 8_1:+51931121 None:intergenic
TGCGACATAAGGATGTGGTG+GGG 0.734427 8_1:+51931150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTAATATTATTATATA+TGG - chr8_1:51929862-51929881 Msa1199710:intron 0.0%
!! AAACAGAAAATAAAAAATAA+TGG + chr8_1:51927613-51927632 None:intergenic 10.0%
!!! ATATTTAACATTTTTCAATT+AGG + chr8_1:51928026-51928045 None:intergenic 10.0%
!!! TTATATTTGATAGTTATAAT+AGG + chr8_1:51928908-51928927 None:intergenic 10.0%
!!! GTATTTTTTTATTAATGATT+TGG + chr8_1:51929224-51929243 None:intergenic 10.0%
!!! ATCTTAAATTTTTAATTGAA+AGG - chr8_1:51929477-51929496 Msa1199710:intron 10.0%
!!! TCTTAAATTTTTAATTGAAA+GGG - chr8_1:51929478-51929497 Msa1199710:intron 10.0%
!!! TTGATATATCTTATTTTTAA+TGG - chr8_1:51929894-51929913 Msa1199710:intron 10.0%
!!! TGATATATCTTATTTTTAAT+GGG - chr8_1:51929895-51929914 Msa1199710:intron 10.0%
!!! AAGTAAGTTTTTTTTTTTAA+TGG + chr8_1:51931826-51931845 None:intergenic 10.0%
!! TAAAAAAAAAAACTTACTTA+AGG - chr8_1:51931827-51931846 Msa1199710:intron 10.0%
!!! AGGAAAAAATAATTAATTTT+AGG + chr8_1:51932243-51932262 None:intergenic 10.0%
!!! AAATTAAAAGAATTGGATTT+TGG - chr8_1:51927774-51927793 Msa1199710:three_prime_UTR 15.0%
!!! AATTAAAAGAATTGGATTTT+GGG - chr8_1:51927775-51927794 Msa1199710:three_prime_UTR 15.0%
!!! ATTTTGGGTTATTTTTTTAT+GGG - chr8_1:51927790-51927809 Msa1199710:three_prime_UTR 15.0%
!!! TTGTTTAAAAATAGTTTTTG+TGG - chr8_1:51928045-51928064 Msa1199710:intron 15.0%
!! TATCAAATATAAAACCTAAT+GGG - chr8_1:51928916-51928935 Msa1199710:intron 15.0%
!! TATCATTGTTAAATTGAAAT+TGG - chr8_1:51929013-51929032 Msa1199710:intron 15.0%
!!! ATTAATGATTTGGAAAATTA+TGG + chr8_1:51929214-51929233 None:intergenic 15.0%
!! AGAAAATATAGTTTAACTAT+GGG + chr8_1:51929674-51929693 None:intergenic 15.0%
!! AAGAAAATATAGTTTAACTA+TGG + chr8_1:51929675-51929694 None:intergenic 15.0%
!! GTTAGAAGTAATAAAAATAA+AGG + chr8_1:51929772-51929791 None:intergenic 15.0%
!!! ATCAGATATTTTTTTAGTAT+TGG + chr8_1:51930043-51930062 None:intergenic 15.0%
!! ACATTTCTATGAATTTATTT+AGG - chr8_1:51930287-51930306 Msa1199710:intron 15.0%
!! CATTTCTATGAATTTATTTA+GGG - chr8_1:51930288-51930307 Msa1199710:intron 15.0%
!! TCAAAAAAAATTAACATGTT+AGG + chr8_1:51931219-51931238 None:intergenic 15.0%
!!! TTTTGTTTGAAAGATAAATT+AGG + chr8_1:51931430-51931449 None:intergenic 15.0%
!! TCATTATAATTAAAATCATC+AGG - chr8_1:51932063-51932082 Msa1199710:intron 15.0%
!! CATTATAATTAAAATCATCA+GGG - chr8_1:51932064-51932083 Msa1199710:intron 15.0%
!!! TTTGAAATTAATGTTTTTGT+TGG - chr8_1:51932964-51932983 Msa1199710:intron 15.0%
!! ATCTGAAAATATTAATACAA+AGG - chr8_1:51933322-51933341 Msa1199710:intron 15.0%
!! CAATGTGAATAATTGAAATT+GGG + chr8_1:51927557-51927576 None:intergenic 20.0%
!! GGAAATCAAATTAAAAGAAT+TGG - chr8_1:51927767-51927786 Msa1199710:three_prime_UTR 20.0%
!!! GATTTTGGGTTATTTTTTTA+TGG - chr8_1:51927789-51927808 Msa1199710:three_prime_UTR 20.0%
!!! ATTTTTTTATGGGTTAATTG+TGG - chr8_1:51927800-51927819 Msa1199710:three_prime_UTR 20.0%
!!! TTTTTTTATGGGTTAATTGT+GGG - chr8_1:51927801-51927820 Msa1199710:three_prime_UTR 20.0%
!!! AAAATTGACCTTTATTTTAC+TGG - chr8_1:51927914-51927933 Msa1199710:intron 20.0%
!! GTATTGTTTGGTTAAATTAA+CGG + chr8_1:51928097-51928116 None:intergenic 20.0%
!! TGGATTAAATTTGTATTGTT+TGG + chr8_1:51928109-51928128 None:intergenic 20.0%
!!! TGGTTTAGTGTATAAATTTT+TGG - chr8_1:51928364-51928383 Msa1199710:intron 20.0%
!!! TTAGTGTATAAATTTTTGGA+AGG - chr8_1:51928368-51928387 Msa1199710:intron 20.0%
!! TGATAAAACGTTAAAAGAAA+AGG - chr8_1:51928427-51928446 Msa1199710:CDS 20.0%
!! ATAATAGGAAAAACTATTGA+TGG + chr8_1:51928893-51928912 None:intergenic 20.0%
!! CTATCAAATATAAAACCTAA+TGG - chr8_1:51928915-51928934 Msa1199710:intron 20.0%
!! AAAAAAAAGTGAAAAAGAAG+AGG + chr8_1:51929637-51929656 None:intergenic 20.0%
!! AGTTTAATGTTGTAATTTAG+AGG - chr8_1:51929927-51929946 Msa1199710:intron 20.0%
!!! TTTTATATCAGAATAGTAGT+AGG + chr8_1:51930920-51930939 None:intergenic 20.0%
!! AAATACACATCAACATAAAA+GGG + chr8_1:51931512-51931531 None:intergenic 20.0%
!! AAAATACACATCAACATAAA+AGG + chr8_1:51931513-51931532 None:intergenic 20.0%
!!! TTTTATGTTGATGTGTATTT+TGG - chr8_1:51931512-51931531 Msa1199710:intron 20.0%
!! TTTGCTTGATATACTAATTA+AGG - chr8_1:51931924-51931943 Msa1199710:intron 20.0%
!! TCTATCATATCTTACTATAA+AGG - chr8_1:51932172-51932191 Msa1199710:intron 20.0%
!! TACTAACTTAAATATAGGAA+TGG - chr8_1:51932602-51932621 Msa1199710:intron 20.0%
!!! TAAATATAGGAATGGATTAT+TGG - chr8_1:51932610-51932629 Msa1199710:intron 20.0%
!!! AAATATAGGAATGGATTATT+GGG - chr8_1:51932611-51932630 Msa1199710:intron 20.0%
!! AATCTATACAGACATAATTT+AGG + chr8_1:51933213-51933232 None:intergenic 20.0%
!! ATGCAATTTGAAAGTTATAA+TGG + chr8_1:51933295-51933314 None:intergenic 20.0%
!! TATCTGATACAAAGATATAT+TGG - chr8_1:51933355-51933374 Msa1199710:intron 20.0%
!! AAAATTATATCAAAGTCGAT+TGG - chr8_1:51933589-51933608 Msa1199710:intron 20.0%
!!! CTTTTTACTTTATGAGATTT+TGG - chr8_1:51933870-51933889 Msa1199710:five_prime_UTR 20.0%
!! AAGAATTTAGGGTATGTAAT+AGG + chr8_1:51927402-51927421 None:intergenic 25.0%
! GCAATGTGAATAATTGAAAT+TGG + chr8_1:51927558-51927577 None:intergenic 25.0%
!!! TTTTTTATGGGTTAATTGTG+GGG - chr8_1:51927802-51927821 Msa1199710:three_prime_UTR 25.0%
!!! TTTTTCAATTAGGATACCTA+GGG + chr8_1:51928016-51928035 None:intergenic 25.0%
!!! ATTTTTCAATTAGGATACCT+AGG + chr8_1:51928017-51928036 None:intergenic 25.0%
! TTGTGGCATTTCATATTTAT+CGG - chr8_1:51928062-51928081 Msa1199710:intron 25.0%
! AATTGATTGTAGTGACATTT+AGG + chr8_1:51928175-51928194 None:intergenic 25.0%
! ATAACATTCTCCATTGAAAT+TGG + chr8_1:51928300-51928319 None:intergenic 25.0%
! ATAACATATCTTACATCACA+AGG + chr8_1:51928334-51928353 None:intergenic 25.0%
! TGTGATGTAAGATATGTTAT+TGG - chr8_1:51928334-51928353 Msa1199710:intron 25.0%
!!! GTTTTAATTAATGTCAAGCT+TGG - chr8_1:51928662-51928681 Msa1199710:CDS 25.0%
! TAAATATGTCTATTGACCTT+TGG + chr8_1:51928967-51928986 None:intergenic 25.0%
! CAGAAAACAATTAAACATAG+TGG + chr8_1:51929707-51929726 None:intergenic 25.0%
! ACAATAACCTCAAAAAAGTA+TGG + chr8_1:51930217-51930236 None:intergenic 25.0%
! AAGTGCAAAAAAAAAAGTGA+AGG + chr8_1:51930386-51930405 None:intergenic 25.0%
! TTACCAATCAAAAGATCAAA+AGG - chr8_1:51930553-51930572 Msa1199710:intron 25.0%
! AAAAGATCAAAAGGAAGTTT+GGG - chr8_1:51930562-51930581 Msa1199710:intron 25.0%
! ACAAGAAAAAATAATGAGCT+TGG - chr8_1:51930601-51930620 Msa1199710:intron 25.0%
! ACTTTCATTCAATTAGAAGA+GGG + chr8_1:51930710-51930729 None:intergenic 25.0%
! TACTTTCATTCAATTAGAAG+AGG + chr8_1:51930711-51930730 None:intergenic 25.0%
! TCTACAAACCATTAATTTAC+AGG + chr8_1:51930757-51930776 None:intergenic 25.0%
! TATAAAACTTGAATTTGCAG+TGG - chr8_1:51930933-51930952 Msa1199710:intron 25.0%
! TAAAACAACAAAAGAACCAA+TGG - chr8_1:51931153-51931172 Msa1199710:CDS 25.0%
! AGAATTGGAAAAGAAAATGT+AGG - chr8_1:51931260-51931279 Msa1199710:intron 25.0%
! GAATTGGAAAAGAAAATGTA+GGG - chr8_1:51931261-51931280 Msa1199710:intron 25.0%
!! TATCATTTTATAGTCTGTTG+AGG - chr8_1:51931299-51931318 Msa1199710:intron 25.0%
!!! CAAAAATCAAGTGTTTTAGT+TGG - chr8_1:51931445-51931464 Msa1199710:intron 25.0%
! TTCCAACAATAACTTATCTA+AGG - chr8_1:51931682-51931701 Msa1199710:intron 25.0%
! CATTCTTAAGATTCTATACA+GGG + chr8_1:51932127-51932146 None:intergenic 25.0%
! ACATTCTTAAGATTCTATAC+AGG + chr8_1:51932128-51932147 None:intergenic 25.0%
! ATCATATCTTACTATAAAGG+CGG - chr8_1:51932175-51932194 Msa1199710:intron 25.0%
!! AATTAATTTTAGGCATCACT+TGG + chr8_1:51932233-51932252 None:intergenic 25.0%
! TGCATGGTATTTATTTCAAT+TGG - chr8_1:51932288-51932307 Msa1199710:intron 25.0%
!!! TTATTTCAATTGGTTTTTGC+AGG - chr8_1:51932298-51932317 Msa1199710:intron 25.0%
!!! TATTTCAATTGGTTTTTGCA+GGG - chr8_1:51932299-51932318 Msa1199710:intron 25.0%
!! CCTATATTTAAGTTAGTAGT+GGG + chr8_1:51932600-51932619 None:intergenic 25.0%
!! TCCTATATTTAAGTTAGTAG+TGG + chr8_1:51932601-51932620 None:intergenic 25.0%
!!! AATATAGGAATGGATTATTG+GGG - chr8_1:51932612-51932631 Msa1199710:intron 25.0%
!!! GAAATTAATGTTTTTGTTGG+TGG - chr8_1:51932967-51932986 Msa1199710:intron 25.0%
!!! TTTGAAATCTTGATGTGTTT+TGG - chr8_1:51933128-51933147 Msa1199710:intron 25.0%
!!! AACAATAACTTGTTGCTATT+TGG + chr8_1:51933551-51933570 None:intergenic 25.0%
!! TAGCAACAAGTTATTGTTTT+TGG - chr8_1:51933553-51933572 Msa1199710:intron 25.0%
!!! AGCAACAAGTTATTGTTTTT+GGG - chr8_1:51933554-51933573 Msa1199710:intron 25.0%
!! GATTGGTCATATGTAATATT+AGG - chr8_1:51933606-51933625 Msa1199710:intron 25.0%
! GCAAGATAAATTACAAATGA+CGG + chr8_1:51933652-51933671 None:intergenic 25.0%
! TTCAAACTACAATTAGCTAA+TGG + chr8_1:51933992-51934011 None:intergenic 25.0%
! AATTTGAACTATAATCCGTT+TGG + chr8_1:51934018-51934037 None:intergenic 25.0%
AGGAAGAGGAATGAAAATTT+GGG + chr8_1:51927382-51927401 None:intergenic 30.0%
TAGGAAGAGGAATGAAAATT+TGG + chr8_1:51927383-51927402 None:intergenic 30.0%
TATGAGATGAAATTACCGTT+GGG + chr8_1:51927510-51927529 None:intergenic 30.0%
CAATTTGGCATAGTAATCAT+TGG + chr8_1:51927725-51927744 None:intergenic 30.0%
TTTCCTCAAAATCAGCAATT+TGG + chr8_1:51927740-51927759 None:intergenic 30.0%
!! TGATTTTGAGGAAATATCGT+AGG - chr8_1:51927746-51927765 Msa1199710:three_prime_UTR 30.0%
AGGAATACATTAGCTGTTTA+AGG - chr8_1:51927831-51927850 Msa1199710:exon 30.0%
! TAGCTGTTTAAGGATTTGTT+TGG - chr8_1:51927841-51927860 Msa1199710:CDS 30.0%
! TTTACTCTCAATTTTACCCT+AGG - chr8_1:51927997-51928016 Msa1199710:intron 30.0%
TATGAGTCTTTAGATGATAG+TGG + chr8_1:51928129-51928148 None:intergenic 30.0%
AAAAACTGTGTGCAAAATCA+TGG - chr8_1:51928260-51928279 Msa1199710:CDS 30.0%
AAAACTGTGTGCAAAATCAT+GGG - chr8_1:51928261-51928280 Msa1199710:CDS 30.0%
CGTTTATTTGCCAATTTCAA+TGG - chr8_1:51928287-51928306 Msa1199710:CDS 30.0%
! AGAAGGCAACAAAATGTTTT+TGG + chr8_1:51928545-51928564 None:intergenic 30.0%
ATTGCCACGTACATAATTAT+TGG - chr8_1:51928793-51928812 Msa1199710:CDS 30.0%
TTGACCAATAATTATGTACG+TGG + chr8_1:51928800-51928819 None:intergenic 30.0%
TCTCAGTTTCTGAATTCTTA+AGG - chr8_1:51928820-51928839 Msa1199710:intron 30.0%
CTCAGTTTCTGAATTCTTAA+GGG - chr8_1:51928821-51928840 Msa1199710:intron 30.0%
TTCTGAATTCTTAAGGGATT+TGG - chr8_1:51928827-51928846 Msa1199710:intron 30.0%
! GGAAAAACTATTGATGGTAA+CGG + chr8_1:51928887-51928906 None:intergenic 30.0%
CTTAAATGCTCAAACACAAA+TGG + chr8_1:51929050-51929069 None:intergenic 30.0%
CATTACATAAACAGAGTTCT+GGG + chr8_1:51929529-51929548 None:intergenic 30.0%
AGTGAAAAAGAAGAGGAATT+GGG + chr8_1:51929630-51929649 None:intergenic 30.0%
AAGTGAAAAAGAAGAGGAAT+TGG + chr8_1:51929631-51929650 None:intergenic 30.0%
! TTGTTTTCTGAGTCCTTTTT+TGG - chr8_1:51929717-51929736 Msa1199710:intron 30.0%
! TGTTTTCTGAGTCCTTTTTT+GGG - chr8_1:51929718-51929737 Msa1199710:intron 30.0%
AAACAAATATGCCCCAAAAA+AGG + chr8_1:51929733-51929752 None:intergenic 30.0%
TAAGCATTTCATCAATAGGA+AGG + chr8_1:51930082-51930101 None:intergenic 30.0%
CATGTAAGCATTTCATCAAT+AGG + chr8_1:51930086-51930105 None:intergenic 30.0%
AAAAAGAACAAAGGCAAAAG+AGG + chr8_1:51930409-51930428 None:intergenic 30.0%
! CTTCCTTTTGATCTTTTGAT+TGG + chr8_1:51930559-51930578 None:intergenic 30.0%
CAAAAGATCAAAAGGAAGTT+TGG - chr8_1:51930561-51930580 Msa1199710:intron 30.0%
CTAATGGAATTCATTCCAAA+AGG - chr8_1:51930644-51930663 Msa1199710:CDS 30.0%
! ATACATTGCATCTTACCTTT+TGG + chr8_1:51930662-51930681 None:intergenic 30.0%
CCATTAATTTACAGGAATTC+AGG + chr8_1:51930749-51930768 None:intergenic 30.0%
CCTGAATTCCTGTAAATTAA+TGG - chr8_1:51930746-51930765 Msa1199710:CDS 30.0%
CAATAGAAAACAAGGATGAA+AGG + chr8_1:51931080-51931099 None:intergenic 30.0%
TAAGCATGCAATAGAAAACA+AGG + chr8_1:51931088-51931107 None:intergenic 30.0%
AATATCTTCTGAGCAATATG+AGG - chr8_1:51931116-51931135 Msa1199710:CDS 30.0%
TAGGATCAATGTTAATAACG+AGG + chr8_1:51931411-51931430 None:intergenic 30.0%
!!! TGATGTGTATTTTGGAATCT+AGG - chr8_1:51931520-51931539 Msa1199710:intron 30.0%
CACTGTAGCTATGTTTATTT+AGG - chr8_1:51931554-51931573 Msa1199710:intron 30.0%
TAAATATACACCCAACACAT+TGG - chr8_1:51931587-51931606 Msa1199710:intron 30.0%
GTCCTTAGATAAGTTATTGT+TGG + chr8_1:51931687-51931706 None:intergenic 30.0%
AATAACTTATCTAAGGACCA+GGG - chr8_1:51931689-51931708 Msa1199710:intron 30.0%
!!! AGATGTTTTAACCAAGTCTT+TGG + chr8_1:51931858-51931877 None:intergenic 30.0%
TATTAACTTTGTCAGACCAA+TGG + chr8_1:51931973-51931992 None:intergenic 30.0%
! ATGCATACATGTTCATTTTG+TGG - chr8_1:51932036-51932055 Msa1199710:intron 30.0%
! GAACATACTGTATTTTGCAT+GGG + chr8_1:51932096-51932115 None:intergenic 30.0%
! TGAACATACTGTATTTTGCA+TGG + chr8_1:51932097-51932116 None:intergenic 30.0%
CCCACTACTAACTTAAATAT+AGG - chr8_1:51932597-51932616 Msa1199710:intron 30.0%
!!! GTCTTTTCTGGTTAACTATT+AGG - chr8_1:51932811-51932830 Msa1199710:intron 30.0%
TGGTTAACTATTAGGATGAA+AGG - chr8_1:51932819-51932838 Msa1199710:intron 30.0%
GGTTAACTATTAGGATGAAA+GGG - chr8_1:51932820-51932839 Msa1199710:intron 30.0%
AGATTTCAAAATCACCTTGA+GGG + chr8_1:51933118-51933137 None:intergenic 30.0%
AAGATTTCAAAATCACCTTG+AGG + chr8_1:51933119-51933138 None:intergenic 30.0%
CTATACAGACATAATTTAGG+TGG + chr8_1:51933210-51933229 None:intergenic 30.0%
!! CAAAGATATATTGGTTCTAC+AGG - chr8_1:51933364-51933383 Msa1199710:intron 30.0%
!! TTACAAATGACGGATCATAT+AGG + chr8_1:51933642-51933661 None:intergenic 30.0%
! ATTTTGGACTTCTTAAAGCT+TGG - chr8_1:51933886-51933905 Msa1199710:five_prime_UTR 30.0%
! TTGTAGTTTGAAACTCCAAA+CGG - chr8_1:51934000-51934019 Msa1199710:five_prime_UTR 30.0%
ATGAAAATTTGGGAGAGATG+AGG + chr8_1:51927372-51927391 None:intergenic 35.0%
TTAGGGTATGTAATAGGAAG+AGG + chr8_1:51927396-51927415 None:intergenic 35.0%
ATGAGATGAAATTACCGTTG+GGG + chr8_1:51927509-51927528 None:intergenic 35.0%
GTATGAGATGAAATTACCGT+TGG + chr8_1:51927511-51927530 None:intergenic 35.0%
!! GTTGTCAGCTCAATTTTGAT+AGG - chr8_1:51927667-51927686 Msa1199710:three_prime_UTR 35.0%
!!! ATGCCAAATTGCTGATTTTG+AGG - chr8_1:51927734-51927753 Msa1199710:three_prime_UTR 35.0%
! TAAGGATTTGTTTGGCAAGA+TGG - chr8_1:51927849-51927868 Msa1199710:CDS 35.0%
GATATGTTATTGGTGCAGAA+TGG - chr8_1:51928344-51928363 Msa1199710:intron 35.0%
! AACATTTTGTTGCCTTCTAC+AGG - chr8_1:51928547-51928566 Msa1199710:intron 35.0%
TTTACACAGCTGAAGGAATA+TGG + chr8_1:51928944-51928963 None:intergenic 35.0%
! GCAATTTTCACAATCATGGA+AGG + chr8_1:51929394-51929413 None:intergenic 35.0%
! TGCTGCAATTTTCACAATCA+TGG + chr8_1:51929398-51929417 None:intergenic 35.0%
GTATTTCCAGAAATCTGACT+CGG - chr8_1:51929441-51929460 Msa1199710:intron 35.0%
AAAATTCCGAGTCAGATTTC+TGG + chr8_1:51929450-51929469 None:intergenic 35.0%
CCATTACATAAACAGAGTTC+TGG + chr8_1:51929530-51929549 None:intergenic 35.0%
CCAGAACTCTGTTTATGTAA+TGG - chr8_1:51929527-51929546 Msa1199710:intron 35.0%
AGTCAACAAACAGTACAATC+TGG - chr8_1:51929581-51929600 Msa1199710:intron 35.0%
GTCAACAAACAGTACAATCT+GGG - chr8_1:51929582-51929601 Msa1199710:intron 35.0%
! TACAATCTGGGTTTTCTAAC+TGG - chr8_1:51929594-51929613 Msa1199710:intron 35.0%
! ACAATCTGGGTTTTCTAACT+GGG - chr8_1:51929595-51929614 Msa1199710:intron 35.0%
!! GTTTTCTGAGTCCTTTTTTG+GGG - chr8_1:51929719-51929738 Msa1199710:intron 35.0%
AAGCTATACACAAGTAGGTT+TGG + chr8_1:51930014-51930033 None:intergenic 35.0%
TTCATCAATAGGAAGGATGA+AGG + chr8_1:51930075-51930094 None:intergenic 35.0%
! TATGGTCTACGAAAGTATAC+CGG + chr8_1:51930199-51930218 None:intergenic 35.0%
!!! TCGTAGACCATACTTTTTTG+AGG - chr8_1:51930207-51930226 Msa1199710:intron 35.0%
GGAGAGAAGAAAAAGAACAA+AGG + chr8_1:51930418-51930437 None:intergenic 35.0%
! TCAGTTACTTTCTGCATACT+TGG + chr8_1:51930461-51930480 None:intergenic 35.0%
! AATTTTTCCTTCACCTCATG+AGG + chr8_1:51930535-51930554 None:intergenic 35.0%
AAGTTTGGGTAGTTCAAACA+TGG - chr8_1:51930576-51930595 Msa1199710:intron 35.0%
AATTTACAGGAATTCAGGCA+AGG + chr8_1:51930744-51930763 None:intergenic 35.0%
TAAATTTCCTGCACTAGACA+AGG + chr8_1:51930829-51930848 None:intergenic 35.0%
GTCTAGTGCAGGAAATTTAT+CGG - chr8_1:51930830-51930849 Msa1199710:intron 35.0%
TGTCACAGAACTTACATTCT+GGG + chr8_1:51931003-51931022 None:intergenic 35.0%
GATAACATGTCAACATCCAT+TGG + chr8_1:51931172-51931191 None:intergenic 35.0%
! ATACATGCATCTAGAAGTGT+AGG - chr8_1:51931381-51931400 Msa1199710:intron 35.0%
TACATGTGCTAACGGTATAT+GGG + chr8_1:51931486-51931505 None:intergenic 35.0%
TTACATGTGCTAACGGTATA+TGG + chr8_1:51931487-51931506 None:intergenic 35.0%
!! AAGGGTATTACATGTGCTAA+CGG + chr8_1:51931494-51931513 None:intergenic 35.0%
ATAAACATAGCTACAGTGTG+TGG + chr8_1:51931552-51931571 None:intergenic 35.0%
CAATAACTTATCTAAGGACC+AGG - chr8_1:51931688-51931707 Msa1199710:intron 35.0%
!! AGCTTAATTGGTTTGAGCTA+AGG - chr8_1:51931722-51931741 Msa1199710:intron 35.0%
!! GCTTAATTGGTTTGAGCTAA+GGG - chr8_1:51931723-51931742 Msa1199710:intron 35.0%
!!! TGTTAGTTTTTTCTCCTTGC+CGG + chr8_1:51931779-51931798 None:intergenic 35.0%
!! GTTTTAACCAAGTCTTTGGA+AGG + chr8_1:51931854-51931873 None:intergenic 35.0%
ACATCTTCCAATTGATCCTT+TGG - chr8_1:51931872-51931891 Msa1199710:intron 35.0%
TGTTAGTCCAAAGGATCAAT+TGG + chr8_1:51931882-51931901 None:intergenic 35.0%
!! GTAAAGCTTTGTTAGTCCAA+AGG + chr8_1:51931891-51931910 None:intergenic 35.0%
TCTTAAGATTCTATACAGGG+TGG + chr8_1:51932124-51932143 None:intergenic 35.0%
ATAGACAGTGAAAAATCAGC+AGG + chr8_1:51932263-51932282 None:intergenic 35.0%
! GTATTAAGTGCACCATTTTG+AGG + chr8_1:51932501-51932520 None:intergenic 35.0%
GTTTGGTTAACAACTGTATG+AGG + chr8_1:51932525-51932544 None:intergenic 35.0%
ATGGTGTTCATTCACAACTT+TGG - chr8_1:51932724-51932743 Msa1199710:intron 35.0%
TACAGGTTAACTTTGTCAAC+AGG - chr8_1:51932748-51932767 Msa1199710:intron 35.0%
!!! TCTTGATGTGTTTTGGTATC+TGG - chr8_1:51933135-51933154 Msa1199710:intron 35.0%
TTCAACCAAGATTCAGATAG+AGG - chr8_1:51933247-51933266 Msa1199710:intron 35.0%
TTCTTCCTCTATCTGAATCT+TGG + chr8_1:51933255-51933274 None:intergenic 35.0%
AACATTTGATGCAGCAGATA+AGG + chr8_1:51933729-51933748 None:intergenic 35.0%
GTTGGTTGAACTAAGAAATG+CGG - chr8_1:51933753-51933772 Msa1199710:intron 35.0%
AAGCACGACAATCCATATAA+TGG + chr8_1:51933799-51933818 None:intergenic 35.0%
TTCTGGGCAAATAATTCTTC+AGG - chr8_1:51933817-51933836 Msa1199710:five_prime_UTR 35.0%
TCTGGGCAAATAATTCTTCA+GGG - chr8_1:51933818-51933837 Msa1199710:five_prime_UTR 35.0%
TTAGAATGTGTGCGATATGT+AGG - chr8_1:51933915-51933934 Msa1199710:five_prime_UTR 35.0%
! GAATTAGGGTTTGGGTTTGT+TGG + chr8_1:51927350-51927369 None:intergenic 40.0%
GAGATGAGGAATTAGGGTTT+GGG + chr8_1:51927358-51927377 None:intergenic 40.0%
AGAGATGAGGAATTAGGGTT+TGG + chr8_1:51927359-51927378 None:intergenic 40.0%
TTGGGAGAGATGAGGAATTA+GGG + chr8_1:51927364-51927383 None:intergenic 40.0%
TTTGGGAGAGATGAGGAATT+AGG + chr8_1:51927365-51927384 None:intergenic 40.0%
! TATGGGTTAATTGTGGGGAA+AGG - chr8_1:51927807-51927826 Msa1199710:three_prime_UTR 40.0%
GCTGCAAGCCAGTAAAATAA+AGG + chr8_1:51927925-51927944 None:intergenic 40.0%
TACATCACAAGGCAGCTAAA+AGG + chr8_1:51928323-51928342 None:intergenic 40.0%
GCTCATGATTTCGTACAGAT+AGG + chr8_1:51928396-51928415 None:intergenic 40.0%
AACCTGATAGTTAGCCCATT+CGG + chr8_1:51928612-51928631 None:intergenic 40.0%
! TGGGCTAACTATCAGGTTTT+TGG - chr8_1:51928614-51928633 Msa1199710:CDS 40.0%
TTATGTACGTGGCAATTACC+TGG + chr8_1:51928789-51928808 None:intergenic 40.0%
GAAGGAATATGGATCCCATT+AGG + chr8_1:51928933-51928952 None:intergenic 40.0%
ATGCTCAAACACAAATGGAC+AGG + chr8_1:51929045-51929064 None:intergenic 40.0%
!! AGCATTTAAGTTGCATGACG+TGG - chr8_1:51929060-51929079 Msa1199710:intron 40.0%
!! GCATTTAAGTTGCATGACGT+GGG - chr8_1:51929061-51929080 Msa1199710:intron 40.0%
AGGAGGAGATTCAAAGATCT+CGG + chr8_1:51929335-51929354 None:intergenic 40.0%
AATTGAAAGGGATCTGTGTC+AGG - chr8_1:51929490-51929509 Msa1199710:intron 40.0%
AGAGGAAGCAGTAAACAGTT+CGG + chr8_1:51929559-51929578 None:intergenic 40.0%
!! GTACTGTTTGTTGACTTGAG+AGG + chr8_1:51929577-51929596 None:intergenic 40.0%
GTAGCAAGCTATACACAAGT+AGG + chr8_1:51930019-51930038 None:intergenic 40.0%
TACATTGCGACATAAGGATG+TGG + chr8_1:51930139-51930158 None:intergenic 40.0%
ATGAGCATATATGCCACCAT+GGG + chr8_1:51930164-51930183 None:intergenic 40.0%
! CTTTTTCTTCTCTCCTACTC+TGG - chr8_1:51930423-51930442 Msa1199710:intron 40.0%
GATGATGAAAAGTCCAGAGT+AGG + chr8_1:51930439-51930458 None:intergenic 40.0%
! TAACTGATGCATTGACATGC+AGG - chr8_1:51930474-51930493 Msa1199710:intron 40.0%
! AACTGATGCATTGACATGCA+GGG - chr8_1:51930475-51930494 Msa1199710:intron 40.0%
AATGAGCTTGGTAAAACACC+AGG - chr8_1:51930613-51930632 Msa1199710:intron 40.0%
ATGAGCTTGGTAAAACACCA+GGG - chr8_1:51930614-51930633 Msa1199710:intron 40.0%
AGTGCAGGAAATTTATCGGT+AGG - chr8_1:51930834-51930853 Msa1199710:intron 40.0%
GTGCAGGAAATTTATCGGTA+GGG - chr8_1:51930835-51930854 Msa1199710:intron 40.0%
GTGTCACAGAACTTACATTC+TGG + chr8_1:51931004-51931023 None:intergenic 40.0%
! GTTCTGTGACACTTGTTAGT+TGG - chr8_1:51931012-51931031 Msa1199710:intron 40.0%
!! ATGAAAGGTTGTGTCACTTC+TGG + chr8_1:51931065-51931084 None:intergenic 40.0%
GATGTTGACATGTTATCGCA+GGG - chr8_1:51931175-51931194 Msa1199710:CDS 40.0%
TCCAACACTTCCAATGTGTT+GGG + chr8_1:51931600-51931619 None:intergenic 40.0%
TGAGCTAAGGGTTAAGTAGT+TGG - chr8_1:51931735-51931754 Msa1199710:intron 40.0%
!!! GTTAGTTTTTTCTCCTTGCC+GGG + chr8_1:51931778-51931797 None:intergenic 40.0%
TTAAGGACCTTCCAAAGACT+TGG - chr8_1:51931844-51931863 Msa1199710:intron 40.0%
! ATTGATTGCCAGAGTACCAT+TGG - chr8_1:51931954-51931973 Msa1199710:intron 40.0%
TCACTGTCTATATGCATGCA+TGG - chr8_1:51932272-51932291 Msa1199710:intron 40.0%
CAGGGCTCTCAATTGAAATT+CGG - chr8_1:51932317-51932336 Msa1199710:intron 40.0%
AGGGCTCTCAATTGAAATTC+GGG - chr8_1:51932318-51932337 Msa1199710:intron 40.0%
TTGCTGTATTACAGATGACC+CGG - chr8_1:51932455-51932474 Msa1199710:intron 40.0%
TAGGTACGACAGACATAGTT+TGG + chr8_1:51932542-51932561 None:intergenic 40.0%
! TTTAAGTTAGTAGTGGGACC+AGG + chr8_1:51932594-51932613 None:intergenic 40.0%
TCATTCACAACTTTGGCTAC+AGG - chr8_1:51932731-51932750 Msa1199710:intron 40.0%
! GCTAAATCTCTCGTCTTTTC+TGG - chr8_1:51932799-51932818 Msa1199710:intron 40.0%
AAAGGGAGCTTAAACGACAA+AGG - chr8_1:51932837-51932856 Msa1199710:CDS 40.0%
ATCCAGTCAGAAGTAGGAAA+AGG + chr8_1:51932928-51932947 None:intergenic 40.0%
! TTTTCCTACTTCTGACTGGA+TGG - chr8_1:51932927-51932946 Msa1199710:intron 40.0%
!!! TGTTTTTGTTGGTGGTTCTC+AGG - chr8_1:51932975-51932994 Msa1199710:intron 40.0%
TCTCGTATTCACTCTTGATC+CGG + chr8_1:51933074-51933093 None:intergenic 40.0%
ATTTAGGTGGCACATGGTAT+GGG + chr8_1:51933197-51933216 None:intergenic 40.0%
AATTTAGGTGGCACATGGTA+TGG + chr8_1:51933198-51933217 None:intergenic 40.0%
GACATAATTTAGGTGGCACA+TGG + chr8_1:51933203-51933222 None:intergenic 40.0%
CAGATAGAGGAAGAATCTAG+TGG - chr8_1:51933260-51933279 Msa1199710:intron 40.0%
!! GAAGAATCTAGTGGACTATG+TGG - chr8_1:51933269-51933288 Msa1199710:intron 40.0%
TCAATAGAGTGGTTAGACAG+AGG - chr8_1:51933460-51933479 Msa1199710:intron 40.0%
CCTGAAAAGCAACATCAAGA+AGG + chr8_1:51933516-51933535 None:intergenic 40.0%
!!! CCTTCTTGATGTTGCTTTTC+AGG - chr8_1:51933513-51933532 Msa1199710:intron 40.0%
! TTTTGACGACAAAAACGACC+TGG - chr8_1:51933672-51933691 Msa1199710:intron 40.0%
ACAAAAACGACCTGGATTGT+AGG - chr8_1:51933680-51933699 Msa1199710:intron 40.0%
TCTGCTGCATCAAATGTTAG+TGG - chr8_1:51933731-51933750 Msa1199710:intron 40.0%
CTGCATCAAATGTTAGTGGT+TGG - chr8_1:51933735-51933754 Msa1199710:intron 40.0%
!! CCATATAATGGACATTGCTC+AGG + chr8_1:51933787-51933806 None:intergenic 40.0%
CCTGAGCAATGTCCATTATA+TGG - chr8_1:51933784-51933803 Msa1199710:intron 40.0%
! TATATGGATTGTCGTGCTTC+TGG - chr8_1:51933800-51933819 Msa1199710:five_prime_UTR 40.0%
! ATATGGATTGTCGTGCTTCT+GGG - chr8_1:51933801-51933820 Msa1199710:five_prime_UTR 40.0%
CGAGGAATGAATGAGTTGTC+CGG + chr8_1:51927310-51927329 None:intergenic 45.0%
!! TGTTGGTGATTGGTGAGTCA+CGG + chr8_1:51927333-51927352 None:intergenic 45.0%
!! GGTTTGGGTTTGTTGGTGAT+TGG + chr8_1:51927343-51927362 None:intergenic 45.0%
GAATCGTCAAAGGTGAAGCA+TGG + chr8_1:51927487-51927506 None:intergenic 45.0%
GGTTAATTGTGGGGAAAGGA+AGG - chr8_1:51927811-51927830 Msa1199710:three_prime_UTR 45.0%
ACTGTGTGCAAAATCATGGG+TGG - chr8_1:51928264-51928283 Msa1199710:CDS 45.0%
TTGAAGACTGCTCCTGTAGA+AGG + chr8_1:51928562-51928581 None:intergenic 45.0%
ACCTGATAGTTAGCCCATTC+GGG + chr8_1:51928611-51928630 None:intergenic 45.0%
CCTGTAGAATGAAAGACTCG+TGG + chr8_1:51928696-51928715 None:intergenic 45.0%
CCACGAGTCTTTCATTCTAC+AGG - chr8_1:51928693-51928712 Msa1199710:CDS 45.0%
TATCCTTCTATACCTCCACC+TGG - chr8_1:51928718-51928737 Msa1199710:CDS 45.0%
! AATCCAGGTGGAGGTATAGA+AGG + chr8_1:51928724-51928743 None:intergenic 45.0%
TATACCTCCACCTGGATTCA+TGG - chr8_1:51928726-51928745 Msa1199710:CDS 45.0%
! CCTTTGGTTTACACAGCTGA+AGG + chr8_1:51928951-51928970 None:intergenic 45.0%
CCTTCAGCTGTGTAAACCAA+AGG - chr8_1:51928948-51928967 Msa1199710:CDS 45.0%
TAGATCAAGTACGCAGCTAC+AGG - chr8_1:51929250-51929269 Msa1199710:intron 45.0%
GTACGCAGCTACAGGAAAAA+AGG - chr8_1:51929258-51929277 Msa1199710:intron 45.0%
GGAGGAGATTCAAAGATCTC+GGG + chr8_1:51929334-51929353 None:intergenic 45.0%
TCTTTGAATCTCCTCCTGTG+TGG - chr8_1:51929338-51929357 Msa1199710:intron 45.0%
! AAGGGATCTGTGTCAGGTTT+TGG - chr8_1:51929496-51929515 Msa1199710:intron 45.0%
! GTTTTCTAACTGGGCCAAGT+AGG - chr8_1:51929604-51929623 Msa1199710:intron 45.0%
TTGCGACATAAGGATGTGGT+GGG + chr8_1:51930135-51930154 None:intergenic 45.0%
ATTGCGACATAAGGATGTGG+TGG + chr8_1:51930136-51930155 None:intergenic 45.0%
TGGGGATACATTGCGACATA+AGG + chr8_1:51930145-51930164 None:intergenic 45.0%
TATGTCGCAATGTATCCCCA+TGG - chr8_1:51930145-51930164 Msa1199710:intron 45.0%
TGAGCATATATGCCACCATG+GGG + chr8_1:51930163-51930182 None:intergenic 45.0%
GATGAGCATATATGCCACCA+TGG + chr8_1:51930165-51930184 None:intergenic 45.0%
GGCATGGCATAAGGACTAAA+AGG + chr8_1:51930321-51930340 None:intergenic 45.0%
! TTTGGAGAAGGCATGGCATA+AGG + chr8_1:51930330-51930349 None:intergenic 45.0%
TATGCCATGCCTTCTCCAAA+TGG - chr8_1:51930330-51930349 Msa1199710:CDS 45.0%
CATACCATTTGGAGAAGGCA+TGG + chr8_1:51930337-51930356 None:intergenic 45.0%
CATGCCTTCTCCAAATGGTA+TGG - chr8_1:51930335-51930354 Msa1199710:intron 45.0%
TCCACCATACCATTTGGAGA+AGG + chr8_1:51930342-51930361 None:intergenic 45.0%
! GAAGCATCCACCATACCATT+TGG + chr8_1:51930348-51930367 None:intergenic 45.0%
! ACTGATGCATTGACATGCAG+GGG - chr8_1:51930476-51930495 Msa1199710:intron 45.0%
AGCTGATGGTAAACCTCATG+AGG - chr8_1:51930519-51930538 Msa1199710:intron 45.0%
TGGTAAACCTCATGAGGTGA+AGG - chr8_1:51930525-51930544 Msa1199710:intron 45.0%
TGAGCTTGGTAAAACACCAG+GGG - chr8_1:51930615-51930634 Msa1199710:intron 45.0%
GGAATTCAGGCAAGGATTAC+TGG + chr8_1:51930736-51930755 None:intergenic 45.0%
TTCATTGCCTTGTCTAGTGC+AGG - chr8_1:51930819-51930838 Msa1199710:intron 45.0%
CTTGTTAGTTGGCTACTGCA+TGG - chr8_1:51931023-51931042 Msa1199710:intron 45.0%
!! AGGTTGTGTCACTTCTGGTT+TGG + chr8_1:51931060-51931079 None:intergenic 45.0%
GGATGTTGACATGTTATCGC+AGG - chr8_1:51931174-51931193 Msa1199710:CDS 45.0%
! ACCCAACACATTGGAAGTGT+TGG - chr8_1:51931596-51931615 Msa1199710:intron 45.0%
CTCCAACACTTCCAATGTGT+TGG + chr8_1:51931601-51931620 None:intergenic 45.0%
!! CAACACATTGGAAGTGTTGG+AGG - chr8_1:51931599-51931618 Msa1199710:intron 45.0%
ACCAAAATGCCGCAACTAGA+CGG - chr8_1:51931636-51931655 Msa1199710:intron 45.0%
AACTTATCTAAGGACCAGGG+AGG - chr8_1:51931692-51931711 Msa1199710:intron 45.0%
ACTTATCTAAGGACCAGGGA+GGG - chr8_1:51931693-51931712 Msa1199710:intron 45.0%
GCTAAGGGTTAAGTAGTTGG+AGG - chr8_1:51931738-51931757 Msa1199710:intron 45.0%
GTTAAGTAGTTGGAGGTCCA+GGG - chr8_1:51931745-51931764 Msa1199710:intron 45.0%
TTGTCAGACCAATGGTACTC+TGG + chr8_1:51931965-51931984 None:intergenic 45.0%
GGGCTCTCAATTGAAATTCG+GGG - chr8_1:51932319-51932338 Msa1199710:intron 45.0%
CTCAATTGAAATTCGGGGAG+AGG - chr8_1:51932324-51932343 Msa1199710:intron 45.0%
! GAGAGGCAGGATTCTTTTGA+AGG - chr8_1:51932341-51932360 Msa1199710:intron 45.0%
!!! ACTGAACTGCCATTTTGAGC+CGG + chr8_1:51932477-51932496 None:intergenic 45.0%
GGCAGTTCAGTACCTCAAAA+TGG - chr8_1:51932486-51932505 Msa1199710:intron 45.0%
CTGGAGGAATGGTTAATGCT+GGG - chr8_1:51932694-51932713 Msa1199710:CDS 45.0%
TGTGAATGAACACCATCTCG+TGG + chr8_1:51932720-51932739 None:intergenic 45.0%
AAAGGCGGAAGCAGTCTAAT+AGG - chr8_1:51932855-51932874 Msa1199710:CDS 45.0%
AAGGCGGAAGCAGTCTAATA+GGG - chr8_1:51932856-51932875 Msa1199710:CDS 45.0%
TATTACCTGCTTTCGCAACC+TGG + chr8_1:51932897-51932916 None:intergenic 45.0%
! AGCCTTTTCCTACTTCTGAC+TGG - chr8_1:51932923-51932942 Msa1199710:intron 45.0%
ATGACCATCCAGTCAGAAGT+AGG + chr8_1:51932934-51932953 None:intergenic 45.0%
! TTCTGAGAATGCTTCCCTCA+AGG - chr8_1:51933101-51933120 Msa1199710:intron 45.0%
!! TTGGTTCTACAGGAGAGACT+CGG - chr8_1:51933374-51933393 Msa1199710:intron 45.0%
ATACCAAGGAACGAGGATCT+TGG - chr8_1:51933401-51933420 Msa1199710:intron 45.0%
TACCAAGGAACGAGGATCTT+GGG - chr8_1:51933402-51933421 Msa1199710:intron 45.0%
AATGATCAGCATGTGGGTGA+AGG - chr8_1:51933434-51933453 Msa1199710:intron 45.0%
TCACACTCTACCTACAATCC+AGG + chr8_1:51933693-51933712 None:intergenic 45.0%
TGTAGGTAGAGTGTGAACAC+TGG - chr8_1:51933697-51933716 Msa1199710:intron 45.0%
!! TAATAAATTAAAAGAATTTA+GGG + chr8_1:51927413-51927432 None:intergenic 5.0%
!! TTAATAAATTAAAAGAATTT+AGG + chr8_1:51927414-51927433 None:intergenic 5.0%
! GTACACTTGGCAGTGCTACT+CGG + chr8_1:51927280-51927299 None:intergenic 50.0%
CACCTTTGACGATTCCCCAA+CGG - chr8_1:51927492-51927511 Msa1199710:three_prime_UTR 50.0%
TACCGTTGGGGAATCGTCAA+AGG + chr8_1:51927497-51927516 None:intergenic 50.0%
TGCTACGTCACAGGTCTTTG+TGG - chr8_1:51928469-51928488 Msa1199710:intron 50.0%
GCTACGTCACAGGTCTTTGT+GGG - chr8_1:51928470-51928489 Msa1199710:intron 50.0%
GAGCAGTCTTCAACGACAAC+CGG - chr8_1:51928569-51928588 Msa1199710:CDS 50.0%
TTCAACGACAACCGGTACTC+CGG - chr8_1:51928577-51928596 Msa1199710:CDS 50.0%
CCTGATAGTTAGCCCATTCG+GGG + chr8_1:51928610-51928629 None:intergenic 50.0%
CTTGATGCCATGAATCCAGG+TGG + chr8_1:51928736-51928755 None:intergenic 50.0%
GGACTTGATGCCATGAATCC+AGG + chr8_1:51928739-51928758 None:intergenic 50.0%
! CACATATATGGGTGGGCTTG+GGG + chr8_1:51928760-51928779 None:intergenic 50.0%
! CCACATATATGGGTGGGCTT+GGG + chr8_1:51928761-51928780 None:intergenic 50.0%
CCAAGCCCACCCATATATGT+GGG - chr8_1:51928759-51928778 Msa1199710:CDS 50.0%
CAAGCCCACCCATATATGTG+GGG - chr8_1:51928760-51928779 Msa1199710:CDS 50.0%
GACACCCCACATATATGGGT+GGG + chr8_1:51928767-51928786 None:intergenic 50.0%
CCTGGACACCCCACATATAT+GGG + chr8_1:51928771-51928790 None:intergenic 50.0%
ACCTGGACACCCCACATATA+TGG + chr8_1:51928772-51928791 None:intergenic 50.0%
AGTTGCATGACGTGGGTATG+AGG - chr8_1:51929068-51929087 Msa1199710:intron 50.0%
!! GGATCTGTGTCAGGTTTTGG+AGG - chr8_1:51929499-51929518 Msa1199710:intron 50.0%
GAAGAGGAATTGGGCCTACT+TGG + chr8_1:51929621-51929640 None:intergenic 50.0%
CAGCATATGATGCCTCCCTA+TGG - chr8_1:51930106-51930125 Msa1199710:intron 50.0%
TGCGACATAAGGATGTGGTG+GGG + chr8_1:51930134-51930153 None:intergenic 50.0%
! AAGTATACCGGAGGCATGGA+TGG + chr8_1:51930187-51930206 None:intergenic 50.0%
! ACGAAAGTATACCGGAGGCA+TGG + chr8_1:51930191-51930210 None:intergenic 50.0%
! GGTCTACGAAAGTATACCGG+AGG + chr8_1:51930196-51930215 None:intergenic 50.0%
GCCTTCTCCAAATGGTATGG+TGG - chr8_1:51930338-51930357 Msa1199710:intron 50.0%
ATTCCATTAGCAGATGCCCC+TGG + chr8_1:51930634-51930653 None:intergenic 50.0%
! AGTGGTGAGAGTGCAAGTGA+AGG - chr8_1:51930951-51930970 Msa1199710:CDS 50.0%
!! GCAAGTGAAGGCACTAGTGA+AGG - chr8_1:51930963-51930982 Msa1199710:CDS 50.0%
! AGTGTTGGAGGCTGCAATGA+AGG - chr8_1:51931611-51931630 Msa1199710:intron 50.0%
CCAAAATGCCGCAACTAGAC+GGG - chr8_1:51931637-51931656 Msa1199710:intron 50.0%
GGAGGGTTGGGTAGCTTAAT+TGG - chr8_1:51931710-51931729 Msa1199710:intron 50.0%
GGTTAAGTAGTTGGAGGTCC+AGG - chr8_1:51931744-51931763 Msa1199710:intron 50.0%
ATTGAAATTCGGGGAGAGGC+AGG - chr8_1:51932328-51932347 Msa1199710:intron 50.0%
ACAGATGACCCGGCTCAAAA+TGG - chr8_1:51932465-51932484 Msa1199710:intron 50.0%
!!! CTGAACTGCCATTTTGAGCC+GGG + chr8_1:51932476-51932495 None:intergenic 50.0%
TGTTGTGAGAGGACCAGCAA+CGG + chr8_1:51932568-51932587 None:intergenic 50.0%
!! GCAGGAATGGTGGATGAAGT+TGG + chr8_1:51932642-51932661 None:intergenic 50.0%
TCCACCATTCCTGCAATGCA+CGG - chr8_1:51932648-51932667 Msa1199710:intron 50.0%
CTTTCCGTGCATTGCAGGAA+TGG + chr8_1:51932655-51932674 None:intergenic 50.0%
CATTCCTGCAATGCACGGAA+AGG - chr8_1:51932653-51932672 Msa1199710:intron 50.0%
GTACCTTCTACTGCAGTTGC+TGG - chr8_1:51932675-51932694 Msa1199710:CDS 50.0%
TACTGCAGTTGCTGGAGGAA+TGG - chr8_1:51932683-51932702 Msa1199710:CDS 50.0%
GCTGGAGGAATGGTTAATGC+TGG - chr8_1:51932693-51932712 Msa1199710:CDS 50.0%
GGGAGCTTAAACGACAAAGG+CGG - chr8_1:51932840-51932859 Msa1199710:CDS 50.0%
TAGATCCAGGTTGCGAAAGC+AGG - chr8_1:51932889-51932908 Msa1199710:exon 50.0%
! TGGTTCTACAGGAGAGACTC+GGG - chr8_1:51933375-51933394 Msa1199710:intron 50.0%
ACCAAGGAACGAGGATCTTG+GGG - chr8_1:51933403-51933422 Msa1199710:intron 50.0%
GGCCAGAATGATCAGCATGT+GGG - chr8_1:51933428-51933447 Msa1199710:intron 50.0%
CACCCACATGCTGATCATTC+TGG + chr8_1:51933433-51933452 None:intergenic 50.0%
!! GGTGAAGGCACTCAATAGAG+TGG - chr8_1:51933449-51933468 Msa1199710:intron 50.0%
TGCCAAGTGTACATCGACGC+CGG - chr8_1:51927288-51927307 Msa1199710:three_prime_UTR 55.0%
AAGACCTGTGACGTAGCAGC+TGG + chr8_1:51928467-51928486 None:intergenic 55.0%
TCCGGCAGTTAACCCCGAAT+GGG - chr8_1:51928595-51928614 Msa1199710:CDS 55.0%
!! CCCCGAATGGGCTAACTATC+AGG - chr8_1:51928607-51928626 Msa1199710:CDS 55.0%
GATGCCATGAATCCAGGTGG+AGG + chr8_1:51928733-51928752 None:intergenic 55.0%
CCCAAGCCCACCCATATATG+TGG - chr8_1:51928758-51928777 Msa1199710:CDS 55.0%
! CCCACATATATGGGTGGGCT+TGG + chr8_1:51928762-51928781 None:intergenic 55.0%
GGACACCCCACATATATGGG+TGG + chr8_1:51928768-51928787 None:intergenic 55.0%
! CCCATATATGTGGGGTGTCC+AGG - chr8_1:51928768-51928787 Msa1199710:CDS 55.0%
CGGGATAGTGCGATGTTACG+AGG + chr8_1:51929315-51929334 None:intergenic 55.0%
TCCTGTGTGGCGATGCACAT+GGG - chr8_1:51929351-51929370 Msa1199710:intron 55.0%
TGTGGCGATGCACATGGGAT+TGG - chr8_1:51929356-51929375 Msa1199710:intron 55.0%
GTGGCGATGCACATGGGATT+GGG - chr8_1:51929357-51929376 Msa1199710:intron 55.0%
GATGCACATGGGATTGGGAG+TGG - chr8_1:51929362-51929381 Msa1199710:intron 55.0%
ACATGGGATTGGGAGTGGCA+GGG - chr8_1:51929367-51929386 Msa1199710:intron 55.0%
GTCGCAATGTATCCCCATGG+TGG - chr8_1:51930148-51930167 Msa1199710:intron 55.0%
TGCTCATCCATCCATGCCTC+CGG - chr8_1:51930177-51930196 Msa1199710:intron 55.0%
GACATGCAGGGGAATACTCC+AGG - chr8_1:51930487-51930506 Msa1199710:intron 55.0%
!! ACACCAGGGGCATCTGCTAA+TGG - chr8_1:51930628-51930647 Msa1199710:intron 55.0%
! CCCGTCTAGTTGCGGCATTT+TGG + chr8_1:51931640-51931659 None:intergenic 55.0%
AGACGGGCAGACTGCAATGA+AGG - chr8_1:51931653-51931672 Msa1199710:intron 55.0%
ATCTAAGGACCAGGGAGGGT+TGG - chr8_1:51931697-51931716 Msa1199710:intron 55.0%
TCTAAGGACCAGGGAGGGTT+GGG - chr8_1:51931698-51931717 Msa1199710:intron 55.0%
TTAAGCTACCCAACCCTCCC+TGG + chr8_1:51931709-51931728 None:intergenic 55.0%
GTCGTACCTATGTCCGTTGC+TGG - chr8_1:51932552-51932571 Msa1199710:intron 55.0%
AGAGGACCAGCAACGGACAT+AGG + chr8_1:51932561-51932580 None:intergenic 55.0%
GGTCCTCTCACAACAGTTCC+TGG - chr8_1:51932573-51932592 Msa1199710:intron 55.0%
GGACCAGGAACTGTTGTGAG+AGG + chr8_1:51932579-51932598 None:intergenic 55.0%
TCCGTGCATTGCAGGAATGG+TGG + chr8_1:51932652-51932671 None:intergenic 55.0%
GGTACCTTTCCGTGCATTGC+AGG + chr8_1:51932660-51932679 None:intergenic 55.0%
CCTCCAGCAACTGCAGTAGA+AGG + chr8_1:51932681-51932700 None:intergenic 55.0%
CCTTCTACTGCAGTTGCTGG+AGG - chr8_1:51932678-51932697 Msa1199710:CDS 55.0%
GTTAATGCTGGGCCACGAGA+TGG - chr8_1:51932705-51932724 Msa1199710:CDS 55.0%
GGGAATCTGCACGTAGATCC+AGG - chr8_1:51932876-51932895 Msa1199710:exon 55.0%
TGAACTAGCTCAGCGTGCTG+AGG - chr8_1:51933008-51933027 Msa1199710:intron 55.0%
TGATCCGGCTCAGTTCAGCA+CGG + chr8_1:51933059-51933078 None:intergenic 55.0%
GGTTCTACAGGAGAGACTCG+GGG - chr8_1:51933376-51933395 Msa1199710:intron 55.0%
AGAGACTCGGGGAGATACCA+AGG - chr8_1:51933387-51933406 Msa1199710:intron 55.0%
TCCCCAAGATCCTCGTTCCT+TGG + chr8_1:51933407-51933426 None:intergenic 55.0%
AAGGAACGAGGATCTTGGGG+AGG - chr8_1:51933406-51933425 Msa1199710:intron 55.0%
AGGAACGAGGATCTTGGGGA+GGG - chr8_1:51933407-51933426 Msa1199710:intron 55.0%
GGGCCAGAATGATCAGCATG+TGG - chr8_1:51933427-51933446 Msa1199710:intron 55.0%
TGGTTAGACAGAGGCTGTGC+AGG - chr8_1:51933469-51933488 Msa1199710:intron 55.0%
GGTTAGACAGAGGCTGTGCA+GGG - chr8_1:51933470-51933489 Msa1199710:intron 55.0%
! GGCTGTGCAGGGTGTTCATT+AGG - chr8_1:51933481-51933500 Msa1199710:intron 55.0%
!! GTCCGGCGTCGATGTACACT+TGG + chr8_1:51927293-51927312 None:intergenic 60.0%
GTGATTGGTGAGTCACGGCG+AGG + chr8_1:51927328-51927347 None:intergenic 60.0%
!! GTAGCAGCTGGAGGCGTCTT+AGG + chr8_1:51928455-51928474 None:intergenic 60.0%
ACCTGTGACGTAGCAGCTGG+AGG + chr8_1:51928464-51928483 None:intergenic 60.0%
GGGGTTAACTGCCGGAGTAC+CGG + chr8_1:51928591-51928610 None:intergenic 60.0%
CTCCGGCAGTTAACCCCGAA+TGG - chr8_1:51928594-51928613 Msa1199710:CDS 60.0%
GCCCATTCGGGGTTAACTGC+CGG + chr8_1:51928599-51928618 None:intergenic 60.0%
CATGTGCATCGCCACACAGG+AGG + chr8_1:51929352-51929371 None:intergenic 60.0%
CTCCTGTGTGGCGATGCACA+TGG - chr8_1:51929350-51929369 Msa1199710:intron 60.0%
TCCCATGTGCATCGCCACAC+AGG + chr8_1:51929355-51929374 None:intergenic 60.0%
CACATGGGATTGGGAGTGGC+AGG - chr8_1:51929366-51929385 Msa1199710:intron 60.0%
! GGATGTGGTGGGGTGCCATA+GGG + chr8_1:51930124-51930143 None:intergenic 60.0%
! AGGATGTGGTGGGGTGCCAT+AGG + chr8_1:51930125-51930144 None:intergenic 60.0%
CCATCAGCTTCACTGCTGCC+TGG + chr8_1:51930508-51930527 None:intergenic 60.0%
CCAGGCAGCAGTGAAGCTGA+TGG - chr8_1:51930505-51930524 Msa1199710:intron 60.0%
GCAGTCTGCCCGTCTAGTTG+CGG + chr8_1:51931648-51931667 None:intergenic 60.0%
CGGGCAGACTGCAATGAAGG+CGG - chr8_1:51931656-51931675 Msa1199710:intron 60.0%
GGGCAGACTGCAATGAAGGC+GGG - chr8_1:51931657-51931676 Msa1199710:intron 60.0%
GAGGTCCAGGGTTCAAGTCC+CGG - chr8_1:51931757-51931776 Msa1199710:intron 60.0%
GCTCAGTTCAGCACGGAGAG+AGG + chr8_1:51933052-51933071 None:intergenic 60.0%
CTCTCCGTGCTGAACTGAGC+CGG - chr8_1:51933052-51933071 Msa1199710:intron 60.0%
CGGGGAGATACCAAGGAACG+AGG - chr8_1:51933394-51933413 Msa1199710:intron 60.0%
GCCTCCAGCTGCTACGTCAC+AGG - chr8_1:51928460-51928479 Msa1199710:intron 65.0%
! TGTGGTGGGGTGCCATAGGG+AGG + chr8_1:51930121-51930140 None:intergenic 65.0%
CCTTGCCGGGACTTGAACCC+TGG + chr8_1:51931765-51931784 None:intergenic 65.0%
CCAGGGTTCAAGTCCCGGCA+AGG - chr8_1:51931762-51931781 Msa1199710:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 51927252 51934051 51927252 ID=Msa1199710;Name=Msa1199710
chr8_1 mRNA 51927252 51934051 51927252 ID=Msa1199710-mRNA-1;Parent=Msa1199710;Name=Msa1199710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=310|0.81|0.91|1|0.90|0.83|12|585|382
chr8_1 exon 51927252 51927917 51927252 ID=Msa1199710-mRNA-1:exon:16478;Parent=Msa1199710-mRNA-1
chr8_1 exon 51928181 51928306 51928181 ID=Msa1199710-mRNA-1:exon:16477;Parent=Msa1199710-mRNA-1
chr8_1 exon 51928393 51928470 51928393 ID=Msa1199710-mRNA-1:exon:16476;Parent=Msa1199710-mRNA-1
chr8_1 exon 51928551 51928834 51928551 ID=Msa1199710-mRNA-1:exon:16475;Parent=Msa1199710-mRNA-1
chr8_1 exon 51928941 51928983 51928941 ID=Msa1199710-mRNA-1:exon:16474;Parent=Msa1199710-mRNA-1
chr8_1 exon 51930296 51930350 51930296 ID=Msa1199710-mRNA-1:exon:16473;Parent=Msa1199710-mRNA-1
chr8_1 exon 51930638 51930807 51930638 ID=Msa1199710-mRNA-1:exon:16472;Parent=Msa1199710-mRNA-1
chr8_1 exon 51930935 51930994 51930935 ID=Msa1199710-mRNA-1:exon:16471;Parent=Msa1199710-mRNA-1
chr8_1 exon 51931075 51931194 51931075 ID=Msa1199710-mRNA-1:exon:16470;Parent=Msa1199710-mRNA-1
chr8_1 exon 51932675 51932734 51932675 ID=Msa1199710-mRNA-1:exon:16469;Parent=Msa1199710-mRNA-1
chr8_1 exon 51932822 51932941 51932822 ID=Msa1199710-mRNA-1:exon:16468;Parent=Msa1199710-mRNA-1
chr8_1 exon 51933790 51934051 51933790 ID=Msa1199710-mRNA-1:exon:16467;Parent=Msa1199710-mRNA-1
chr8_1 five_prime_UTR 51933790 51934051 51933790 ID=Msa1199710-mRNA-1:five_prime_utr;Parent=Msa1199710-mRNA-1
chr8_1 five_prime_UTR 51932894 51932941 51932894 ID=Msa1199710-mRNA-1:five_prime_utr;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51932822 51932893 51932822 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51932675 51932734 51932675 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51931075 51931194 51931075 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51930935 51930994 51930935 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51930638 51930807 51930638 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51930296 51930350 51930296 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51928941 51928983 51928941 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51928551 51928834 51928551 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51928393 51928470 51928393 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51928181 51928306 51928181 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 CDS 51927837 51927917 51927837 ID=Msa1199710-mRNA-1:cds;Parent=Msa1199710-mRNA-1
chr8_1 three_prime_UTR 51927252 51927836 51927252 ID=Msa1199710-mRNA-1:three_prime_utr;Parent=Msa1199710-mRNA-1
Gene Sequence

>Msa1199710

ATGAGCAGCAACGACGTTGATAAAACGTTAAAAGAAAAGGAGCCTAAGACGCCTCCAGCTGCTACGTCACAGGAGCAGTCTTCAACGACAACCGGTACTCCGGCAGTTAACCCCGAATGGGCTAACTATCAGCATATGATGCCTCCCTATGGCACCCCACCACATCCTTATGTCGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGTATACTTTCGTAGACCATACTTTTTTGAGGGATCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGGAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTCAAACATGGTTACAAGAAAAAATAATGAGCTTGGTAAAACACCAGGGGCATCTGCTAATGGAATTCATTCCAAAAGTGGTGAGAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCAGAATGGCTCTCAATTGAAATTCGGGGAGAGGCAGGATTCTTTTGAAGATGACCCGGCTCAAAATGGCAGTTCAGTACCTCAAAATGGTGCACTTAATACACCTCATACAGTTGTTAACCAAACTATGTCTGTCGTACCTATGTCCGTTGCTGGTCCTCTCACAACAGTTCCTGGTCCCACTACTAACTTAAATATAGGAATGGATTATTGGGGAACGCCAACTTCATCCACCATTCCTGCAATGCACGGAAAGGTACCTTCTACTGCAGTTGCTGGAGGAATGGTTAATGCTGGGCCACGAGATGGTGTTCATTCACAACTTTGGCTACAGGATGAAAGGGAGCTTAAACGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAACTAGCTCAGCGTGCTGAGGTTTTGAATCAAGAAAATGCCTCTCTCCGTGCTGAACTGAGCCGGATCAAGAGTGAATACGAGAAGATACGTTCTGAGAATGCTTCCCTCAAGGAGAGACTCGGGGAGATACCAAGGAACGAGGATCTTGGGGAGGGCCAGAATGATCAGCATGTGGGTGAAGGCACTCAATAG
Protein sequence

>Msa1199710

MSSNDVDKTLKEKEPKTPPAATSQEQSSTTTGTPAVNPEWANYQHMMPPYGTPPHPYVAMYPHGGIYAHPSMPPVYFRRPYFFEGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSLGSSNMVTRKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSQNGSQLKFGERQDSFEDDPAQNGSSVPQNGALNTPHTVVNQTMSVVPMSVAGPLTTVPGPTTNLNIGMDYWGTPTSSTIPAMHGKVPSTAVAGGMVNAGPRDGVHSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNQENASLRAELSRIKSEYEKIRSENASLKERLGEIPRNEDLGEGQNDQHVGEGTQ*