AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0900710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900710 MtrunA17_Chr6g0486861 84.804 204 28 2 1 204 1 201 5.93e-124 360
Msa0900710 MtrunA17_Chr6g0486861 75.000 164 7 1 171 334 245 374 7.25e-73 230
Msa0900710 MtrunA17_Chr8g0389881 59.500 200 73 6 1 196 1 196 4.17e-73 230
Msa0900710 MtrunA17_Chr8g0389881 62.048 166 27 2 171 334 244 375 6.80e-57 189
Msa0900710 MtrunA17_Chr6g0486881 82.090 134 21 2 17 147 9 142 1.74e-72 224
Msa0900710 MtrunA17_Chr5g0405691 28.993 407 141 11 24 319 62 431 8.96e-35 132
Msa0900710 MtrunA17_Chr4g0037211 26.980 404 183 9 8 333 33 402 1.20e-34 130
Msa0900710 MtrunA17_Chr8g0361491 67.273 55 18 0 46 100 1 55 1.67e-20 84.0
Msa0900710 MtrunA17_Chr8g0371621 25.472 318 108 8 27 218 71 385 4.06e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900710 AT3G21600.3 49.689 161 74 3 18 172 20 179 1.77e-49 166
Msa0900710 AT3G21600.2 49.689 161 74 3 18 172 20 179 2.45e-49 169
Msa0900710 AT3G21600.2 54.483 145 31 2 167 311 244 353 8.54e-33 125
Msa0900710 AT3G21600.1 49.689 161 74 3 18 172 20 179 2.75e-49 169
Msa0900710 AT3G21600.1 54.545 154 35 2 167 320 244 362 5.65e-36 134
Msa0900710 AT4G15450.2 33.053 357 169 12 29 329 32 374 1.76e-48 167
Msa0900710 AT4G15450.1 31.405 363 173 12 29 329 32 380 2.63e-44 156
Msa0900710 AT4G35985.1 27.792 403 157 10 17 320 55 422 6.14e-36 135
Msa0900710 AT2G17840.1 27.273 418 155 12 11 319 54 431 1.62e-31 123
Msa0900710 AT4G35985.3 28.097 331 138 9 17 248 55 384 6.67e-28 112
Msa0900710 AT3G51250.1 27.078 373 188 11 27 317 70 440 1.58e-26 109
Msa0900710 AT2G17840.2 26.801 347 139 11 11 248 54 394 4.31e-24 102
Msa0900710 AT4G35985.2 29.952 207 103 6 17 183 55 259 5.08e-19 86.7
Msa0900710 AT3G51250.2 27.830 212 97 5 27 183 70 280 5.52e-19 87.4
Msa0900710 AT3G21590.3 51.282 78 38 0 171 248 141 218 5.04e-16 76.3

Find 61 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATTGGTGGTAGGGTTT+TGG 0.236710 6_1:+96932401 None:intergenic
GAAAGATGGTTCAAAATCTT+AGG 0.258588 6_1:-96923996 Msa0900710:three_prime_UTR
AACACCATTGAGTAAAGATT+TGG 0.289285 6_1:+96930845 None:intergenic
TTAGCAACAATCATCAAAAT+AGG 0.318911 6_1:-96932207 Msa0900710:CDS
TTTCTTGCTAAGGCTATTGC+TGG 0.337164 6_1:-96931922 Msa0900710:intron
AACCATTCTTGTTGCAGCTT+GGG 0.343724 6_1:+96929905 None:intergenic
AGAAGAAGAGTGATCTTGAT+TGG 0.343736 6_1:-96931981 Msa0900710:CDS
GAGAAATTTGGAGAAGCTAT+AGG 0.362475 6_1:+96932369 None:intergenic
CAACAAGAATGGTTTCTAAC+AGG 0.380521 6_1:-96929896 Msa0900710:intron
AGGATGTAAAGTTTATCTAA+TGG 0.383498 6_1:-96932301 Msa0900710:CDS
CCTCTCCTGGGAGCATCTTA+AGG 0.391812 6_1:+96930763 None:intergenic
TATAGGTATGGGGAAGAAGC+AGG 0.403987 6_1:-96924289 Msa0900710:intron
GAAATTCTTATACAAATTCC+AGG 0.407082 6_1:-96932321 Msa0900710:CDS
TGCACTAGAAGCTGGATTGA+TGG 0.416281 6_1:+96924189 None:intergenic
TTTGTATTTAACACAGATGA+AGG 0.431932 6_1:-96924101 Msa0900710:three_prime_UTR
TTGTCCAAATCTTTACTCAA+TGG 0.445995 6_1:-96930849 Msa0900710:CDS
AAAGTAACACCATAGCTTAG+AGG 0.460022 6_1:+96932087 None:intergenic
AAACCATTCTTGTTGCAGCT+TGG 0.465341 6_1:+96929904 None:intergenic
AGATTATCAACCTTCACAAC+TGG 0.466828 6_1:+96932150 None:intergenic
AAAGATGGTTCAAAATCTTA+GGG 0.469183 6_1:-96923995 Msa0900710:three_prime_UTR
AGTGTAGCTGCACTAGAAGC+TGG 0.473361 6_1:+96924181 None:intergenic
GAAGCCAACAGAACCTCTCC+TGG 0.484119 6_1:+96930750 None:intergenic
ATAGGTATGGGGAAGAAGCA+GGG 0.484548 6_1:-96924288 Msa0900710:intron
CCTCAAATCTCAACCAGGAC+AGG 0.485657 6_1:-96930790 Msa0900710:CDS
CATTCTTGTTGCAGCTTGGG+AGG 0.487768 6_1:+96929908 None:intergenic
GAAGAAGAGTGATCTTGATT+GGG 0.488678 6_1:-96931980 Msa0900710:CDS
ATTAGATAAACTTTACATCC+TGG 0.490753 6_1:+96932303 None:intergenic
CCTGGTTGAGATTTGAGGAC+AGG 0.496940 6_1:+96930795 None:intergenic
TGTTGCAGCTTGGGAGGTGG+CGG 0.497700 6_1:+96929914 None:intergenic
AAATCTTTACTCAATGGTGT+TGG 0.499913 6_1:-96930843 Msa0900710:CDS
ATCTTAAGGAATGCCTGTCC+TGG 0.501346 6_1:+96930777 None:intergenic
TCTTGTTGCAGCTTGGGAGG+TGG 0.504003 6_1:+96929911 None:intergenic
CTCCAAAACCCTACCACCAA+TGG 0.507062 6_1:-96932403 Msa0900710:CDS
CTCCCAAGCTGCAACAAGAA+TGG 0.507194 6_1:-96929907 Msa0900710:CDS
TAGGTATGGGGAAGAAGCAG+GGG 0.514222 6_1:-96924287 Msa0900710:CDS
AATCAACTTGATGAGAAAGA+TGG 0.516985 6_1:-96924010 Msa0900710:three_prime_UTR
GACATGCTGCTAATACTGCT+TGG 0.519819 6_1:-96924234 Msa0900710:CDS
TTTACTTACTGACTGCATCA+AGG 0.520023 6_1:+96930727 None:intergenic
GCTCCCAGGAGAGGTTCTGT+TGG 0.526761 6_1:-96930754 Msa0900710:CDS
GGCTCATGACCATCTTTCAC+TGG 0.543710 6_1:+96932108 None:intergenic
CCTGTCCTGGTTGAGATTTG+AGG 0.544020 6_1:+96930790 None:intergenic
TCTCTTCCATACAATTCCTA+CGG 0.544523 6_1:-96929548 Msa0900710:intron
AAAATCTTAGGGAGCAATGT+TGG 0.545791 6_1:-96923984 Msa0900710:three_prime_UTR
AAAGTTTATCTAATGGATGA+AGG 0.547066 6_1:-96932294 Msa0900710:CDS
CTTTCACTGGCAATGAAAAG+AGG 0.549035 6_1:+96932121 None:intergenic
ATTTGGAGAAGCTATAGGAA+TGG 0.551970 6_1:+96932374 None:intergenic
TTACTTACTGACTGCATCAA+GGG 0.565912 6_1:+96930728 None:intergenic
AAATACTTGTATAATTCTGA+AGG 0.573146 6_1:+96924065 None:intergenic
GACTCTGATTTATATAGCAG+TGG 0.575266 6_1:-96929606 Msa0900710:CDS
GGTCATGAGCCTCTAAGCTA+TGG 0.578398 6_1:-96932096 Msa0900710:CDS
CCTTAAGATGCTCCCAGGAG+AGG 0.579842 6_1:-96930763 Msa0900710:CDS
ATTTAACACAGATGAAGGCA+TGG 0.583201 6_1:-96924096 Msa0900710:three_prime_UTR
AAAAGATGAACCAGTTGTGA+AGG 0.590079 6_1:-96932160 Msa0900710:CDS
GCATTCCTTAAGATGCTCCC+AGG 0.593115 6_1:-96930768 Msa0900710:CDS
CCTGTCCTCAAATCTCAACC+AGG 0.610346 6_1:-96930795 Msa0900710:CDS
AAGCCAACAGAACCTCTCCT+GGG 0.615497 6_1:+96930751 None:intergenic
GAGCATGTATTTGCAACTGC+AGG 0.617638 6_1:-96924256 Msa0900710:CDS
GTCTTGGTTATATAGGTATG+GGG 0.638426 6_1:-96924299 Msa0900710:intron
ATGCTACCAGAAAATTCATG+TGG 0.664358 6_1:+96932063 None:intergenic
AATGGTGTTGGAATAGTGAG+TGG 0.664953 6_1:-96930831 Msa0900710:CDS
GAAGCACATGAACTTACACA+AGG 0.731250 6_1:-96932270 Msa0900710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAAAAAAATGAAC+AGG + chr6_1:96925808-96925827 None:intergenic 10.0%
!! TAAAAATATAAGATAGATAT+TGG + chr6_1:96926248-96926267 None:intergenic 10.0%
!!! TATTATTTATAAGTTTGTTA+AGG - chr6_1:96931420-96931439 Msa0900710:intron 10.0%
!!! ATTACTTTTCAAACAAAAAT+AGG + chr6_1:96924935-96924954 None:intergenic 15.0%
!!! TTTAACAATGTCAATTATTT+TGG + chr6_1:96926098-96926117 None:intergenic 15.0%
!!! TTGCTATTTTATGAAATTAA+AGG - chr6_1:96926132-96926151 Msa0900710:intron 15.0%
!!! TATCTTATATTTTTAACAAG+TGG - chr6_1:96926253-96926272 Msa0900710:intron 15.0%
!!! AAAAATTAAAATTTTCTAGG+TGG + chr6_1:96926421-96926440 None:intergenic 15.0%
!!! TATTTAACCTTTTTTAATGA+GGG + chr6_1:96931642-96931661 None:intergenic 15.0%
!!! ATATTTAACCTTTTTTAATG+AGG + chr6_1:96931643-96931662 None:intergenic 15.0%
!!! TTTTACTTTGACAATTTTTT+TGG - chr6_1:96931838-96931857 Msa0900710:intron 15.0%
!!! TTTTGAAAATGAATTTTACA+CGG - chr6_1:96932415-96932434 Msa0900710:CDS 15.0%
!!! TGATTATAATTTTCAACACT+TGG + chr6_1:96924333-96924352 None:intergenic 20.0%
!!! TTATAATCATTTTCTTGCTA+AGG - chr6_1:96924344-96924363 Msa0900710:intron 20.0%
!! TTAGAACTTTATATGAAAAC+AGG + chr6_1:96924530-96924549 None:intergenic 20.0%
!!! GTTGTTTTCATTAGATATTT+TGG - chr6_1:96924550-96924569 Msa0900710:intron 20.0%
!! TAGTATTTCCTTAAAACTTA+TGG + chr6_1:96924604-96924623 None:intergenic 20.0%
!!! AAAACAAGAAAGTTTTAAGT+TGG + chr6_1:96924688-96924707 None:intergenic 20.0%
!!! AACTTAAAACTTTCTTGTTT+TGG - chr6_1:96924687-96924706 Msa0900710:intron 20.0%
!! GCTATTTGGTATAAAATTTA+GGG + chr6_1:96924746-96924765 None:intergenic 20.0%
!!! TTAAAAGTTGTTTTGAAATC+AGG - chr6_1:96924975-96924994 Msa0900710:intron 20.0%
!!! ATACTTAATAACCTTTTAAC+CGG + chr6_1:96925307-96925326 None:intergenic 20.0%
!! GTTATGTAAACACTAAATTT+AGG + chr6_1:96925658-96925677 None:intergenic 20.0%
!! ACACTTATTTATTAGTTATC+CGG - chr6_1:96925847-96925866 Msa0900710:intron 20.0%
!! TTACAATTTCAACTACTTAA+AGG - chr6_1:96926172-96926191 Msa0900710:intron 20.0%
!!! ATAATTTTACCCTTAATGTT+TGG - chr6_1:96926465-96926484 Msa0900710:intron 20.0%
!!! AAAGGCTTTTACTAAATAAA+TGG + chr6_1:96926768-96926787 None:intergenic 20.0%
!!! TATTTAGTAAAAGCCTTTTA+TGG - chr6_1:96926770-96926789 Msa0900710:intron 20.0%
!! AGAATCCTGATATATATAAA+AGG + chr6_1:96927372-96927391 None:intergenic 20.0%
!! GAGGATAATTTATAATTGAT+AGG - chr6_1:96927570-96927589 Msa0900710:intron 20.0%
!! AATTTATAATTGATAGGAAG+TGG - chr6_1:96927576-96927595 Msa0900710:intron 20.0%
!! ATTTATAATTGATAGGAAGT+GGG - chr6_1:96927577-96927596 Msa0900710:intron 20.0%
!! ATAGAAAAGATAGGAATATT+TGG + chr6_1:96927674-96927693 None:intergenic 20.0%
!! TCTAGAAAATGTATATTCTT+GGG + chr6_1:96928746-96928765 None:intergenic 20.0%
!!! AATATACATTTTCTAGACTT+TGG - chr6_1:96928749-96928768 Msa0900710:intron 20.0%
!! AATAATATATACATGCTTGT+GGG + chr6_1:96929568-96929587 None:intergenic 20.0%
!! AAATAATATATACATGCTTG+TGG + chr6_1:96929569-96929588 None:intergenic 20.0%
!! AGAAGAATTTATTGTCTATT+GGG + chr6_1:96929687-96929706 None:intergenic 20.0%
!! AAGAAGAATTTATTGTCTAT+TGG + chr6_1:96929688-96929707 None:intergenic 20.0%
!!! TATGTGATTTGTTATTGATA+TGG - chr6_1:96930419-96930438 Msa0900710:intron 20.0%
!!! ACACAAGAATTTTCTTAAAA+AGG + chr6_1:96930473-96930492 None:intergenic 20.0%
!! TTAAGATTGAGAAGTTTAAT+GGG + chr6_1:96930737-96930756 None:intergenic 20.0%
!!! TTTAAGATTGAGAAGTTTAA+TGG + chr6_1:96930738-96930757 None:intergenic 20.0%
!!! AAAGGCTTTTACTAAATAAA+TGG + chr6_1:96926768-96926787 None:intergenic 20.0%
!!! TATTTAGTAAAAGCCTTTTA+TGG - chr6_1:96926770-96926789 Msa0900710:intron 20.0%
!!! GAGTTGTTTGATAATTATTT+TGG - chr6_1:96931324-96931343 Msa0900710:intron 20.0%
!!! AAGTTTGTTAAGGTATTTTA+TGG - chr6_1:96931430-96931449 Msa0900710:intron 20.0%
!!! TTTTTTACCCTCATTAAAAA+AGG - chr6_1:96931632-96931651 Msa0900710:intron 20.0%
!! TAGTTGAGAAAAAATTAATG+TGG + chr6_1:96931881-96931900 None:intergenic 20.0%
!! AAATACTTGTATAATTCTGA+AGG + chr6_1:96932214-96932233 None:intergenic 20.0%
!!! ATTATACAAGTATTTTGTGT+TGG - chr6_1:96932219-96932238 Msa0900710:CDS 20.0%
!!! ATTTTTCTTAAGTCATCTTA+TGG + chr6_1:96932249-96932268 None:intergenic 20.0%
!!! TTTGGTTTTGTTGAGAAATT+TGG + chr6_1:96923922-96923941 None:intergenic 25.0%
!! ATTTCTTGTCTAAGAGTTTT+TGG + chr6_1:96923940-96923959 None:intergenic 25.0%
! GAAATTCTTATACAAATTCC+AGG - chr6_1:96923955-96923974 Msa0900710:three_prime_UTR 25.0%
! ATTAGATAAACTTTACATCC+TGG + chr6_1:96923976-96923995 None:intergenic 25.0%
! AGGATGTAAAGTTTATCTAA+TGG - chr6_1:96923975-96923994 Msa0900710:three_prime_UTR 25.0%
!! AAAGTTTATCTAATGGATGA+AGG - chr6_1:96923982-96924001 Msa0900710:three_prime_UTR 25.0%
! TTAGCAACAATCATCAAAAT+AGG - chr6_1:96924069-96924088 Msa0900710:three_prime_UTR 25.0%
!! TTTGGTTGAATCTTTTCTTA+AGG - chr6_1:96924239-96924258 Msa0900710:CDS 25.0%
!! GAAAATTGCCATAAGTTTTA+AGG - chr6_1:96924593-96924612 Msa0900710:intron 25.0%
! CAAATATAGTAGTATTGTGT+TGG - chr6_1:96924655-96924674 Msa0900710:intron 25.0%
! GGCTATTTGGTATAAAATTT+AGG + chr6_1:96924747-96924766 None:intergenic 25.0%
!! ATTTAGCTCAATCTAAAAGT+TGG + chr6_1:96924768-96924787 None:intergenic 25.0%
!!! TTTTGAAATCAGGTTCAAAA+AGG - chr6_1:96924985-96925004 Msa0900710:intron 25.0%
! AAAATTAATCTCCGGTTAAA+AGG - chr6_1:96925293-96925312 Msa0900710:intron 25.0%
! AACTTATTGAACCATGATTT+GGG - chr6_1:96925884-96925903 Msa0900710:intron 25.0%
!!! GTAATGCTTTAAAATCAAAC+AGG + chr6_1:96925924-96925943 None:intergenic 25.0%
! GTAGTTGAAATTGTAAAACT+CGG + chr6_1:96926168-96926187 None:intergenic 25.0%
!!! TAATTTTGACCATCTTATGA+TGG + chr6_1:96926208-96926227 None:intergenic 25.0%
!!! AGTTTGCTACAATTAATTGA+GGG + chr6_1:96926539-96926558 None:intergenic 25.0%
!!! TAGTTTGCTACAATTAATTG+AGG + chr6_1:96926540-96926559 None:intergenic 25.0%
!! TCACATTTAAGTTATGGAAA+TGG + chr6_1:96926802-96926821 None:intergenic 25.0%
!! GTAAAGTCACATTTAAGTTA+TGG + chr6_1:96926808-96926827 None:intergenic 25.0%
! TCAATGTTGACAAATTTACA+TGG + chr6_1:96926897-96926916 None:intergenic 25.0%
! TATTTGGATACAAAGACTAA+TGG + chr6_1:96927127-96927146 None:intergenic 25.0%
! TTCATTATGTTTCATAGGAT+TGG + chr6_1:96927337-96927356 None:intergenic 25.0%
! GATGTTTCATTATGTTTCAT+AGG + chr6_1:96927342-96927361 None:intergenic 25.0%
! GAAACATAATGAAACATCTA+AGG - chr6_1:96927344-96927363 Msa0900710:intron 25.0%
!! AGGTTCCTTTTATATATATC+AGG - chr6_1:96927364-96927383 Msa0900710:intron 25.0%
! TTTATAATTGATAGGAAGTG+GGG - chr6_1:96927578-96927597 Msa0900710:intron 25.0%
!! TATTCCTATCTTTTCTATCT+CGG - chr6_1:96927676-96927695 Msa0900710:intron 25.0%
!!! TATCATTTTGTTGTTGTATG+TGG + chr6_1:96927823-96927842 None:intergenic 25.0%
! CTTACATAGAAACAAAACTT+GGG + chr6_1:96928321-96928340 None:intergenic 25.0%
!! ATTGTCTTTTAACAGAAGAA+GGG + chr6_1:96928424-96928443 None:intergenic 25.0%
!! TATTGTCTTTTAACAGAAGA+AGG + chr6_1:96928425-96928444 None:intergenic 25.0%
! GTCTAGAAAATGTATATTCT+TGG + chr6_1:96928747-96928766 None:intergenic 25.0%
! AAATGTGTTTACAGTATTCA+AGG + chr6_1:96929188-96929207 None:intergenic 25.0%
!! ACATTTGATTTCTTCTTGAT+TGG - chr6_1:96929202-96929221 Msa0900710:intron 25.0%
!! CATTTGATTTCTTCTTGATT+GGG - chr6_1:96929203-96929222 Msa0900710:intron 25.0%
! ATAATATATACATGCTTGTG+GGG + chr6_1:96929567-96929586 None:intergenic 25.0%
! GGAAACTTAAAAGTAGTAAA+GGG + chr6_1:96929625-96929644 None:intergenic 25.0%
! TGGAAACTTAAAAGTAGTAA+AGG + chr6_1:96929626-96929645 None:intergenic 25.0%
! GATTGGTACTATCAAAATAA+AGG + chr6_1:96929764-96929783 None:intergenic 25.0%
! TTGATATGGATTCATTCATT+CGG - chr6_1:96930433-96930452 Msa0900710:intron 25.0%
!! CAAGAATTTTCTTAAAAAGG+AGG + chr6_1:96930470-96930489 None:intergenic 25.0%
!! AATCTTAAATTTTGTTGCCA+TGG - chr6_1:96930749-96930768 Msa0900710:CDS 25.0%
! TACGTATACTATACTATTCA+CGG + chr6_1:96930800-96930819 None:intergenic 25.0%
!! ACTAGATTTGTTCAAGTATA+CGG + chr6_1:96930842-96930861 None:intergenic 25.0%
!! TCACATTTAAGTTATGGAAA+TGG + chr6_1:96926802-96926821 None:intergenic 25.0%
!! GTAAAGTCACATTTAAGTTA+TGG + chr6_1:96926808-96926827 None:intergenic 25.0%
! TTTGTATTTAACACAGATGA+AGG - chr6_1:96932175-96932194 Msa0900710:CDS 25.0%
! AAAGATGGTTCAAAATCTTA+GGG - chr6_1:96932281-96932300 Msa0900710:CDS 25.0%
!!! ATAGGAATGGTTTTTTCCAT+TGG + chr6_1:96923892-96923911 None:intergenic 30.0%
!! ACTGGTTCATCTTTTGTTAA+AGG + chr6_1:96924111-96924130 None:intergenic 30.0%
! ACTTTTCCACATGAATTTTC+TGG - chr6_1:96924207-96924226 Msa0900710:CDS 30.0%
ACTATATTTGCTTCCTTAAC+CGG + chr6_1:96924645-96924664 None:intergenic 30.0%
! TATGCTAACCAATGTTTTAC+CGG + chr6_1:96924722-96924741 None:intergenic 30.0%
CAATCTAAAAGTTGGCTATT+TGG + chr6_1:96924760-96924779 None:intergenic 30.0%
TCTTATCTGAAGGACTATTT+AGG + chr6_1:96925023-96925042 None:intergenic 30.0%
AGTCCTTCAGATAAGATAAA+TGG - chr6_1:96925027-96925046 Msa0900710:intron 30.0%
ATTCATTCTGTTGTTCTTTG+TGG + chr6_1:96925103-96925122 None:intergenic 30.0%
GAATGAATGAAAACCTCATA+CGG - chr6_1:96925115-96925134 Msa0900710:intron 30.0%
!! GTATTTTTGAATACCGTATG+AGG + chr6_1:96925131-96925150 None:intergenic 30.0%
! ATTGAGAGTGTAAAATAGTC+AGG + chr6_1:96925153-96925172 None:intergenic 30.0%
AGGTAGATATGATTAAAGTC+AGG + chr6_1:96925205-96925224 None:intergenic 30.0%
TTGTCCAAATCTTTACTCAA+TGG - chr6_1:96925427-96925446 Msa0900710:intron 30.0%
AACACCATTGAGTAAAGATT+TGG + chr6_1:96925434-96925453 None:intergenic 30.0%
AAATCTTTACTCAATGGTGT+TGG - chr6_1:96925433-96925452 Msa0900710:intron 30.0%
AGATCTTCAACTTTGGTTAT+AGG + chr6_1:96925583-96925602 None:intergenic 30.0%
CTATGTAAGATCTTCAACTT+TGG + chr6_1:96925590-96925609 None:intergenic 30.0%
! TGGTTCAATAAGTTGAATCA+TGG + chr6_1:96925878-96925897 None:intergenic 30.0%
CAACTTATTGAACCATGATT+TGG - chr6_1:96925883-96925902 Msa0900710:intron 30.0%
!! GCATAAAACCTTTAAAGTTG+TGG - chr6_1:96926053-96926072 Msa0900710:intron 30.0%
ATTTAGCACCACAACTTTAA+AGG + chr6_1:96926064-96926083 None:intergenic 30.0%
CAATTTCAACTACTTAAAGG+TGG - chr6_1:96926175-96926194 Msa0900710:intron 30.0%
! ATCTTTTAATGTCACAGACA+AGG - chr6_1:96926300-96926319 Msa0900710:intron 30.0%
ACATGTAAGCCAAACATTAA+GGG + chr6_1:96926477-96926496 None:intergenic 30.0%
TACATGTAAGCCAAACATTA+AGG + chr6_1:96926478-96926497 None:intergenic 30.0%
AATTGTAGCAAACTAACTGT+TGG - chr6_1:96926545-96926564 Msa0900710:intron 30.0%
ATTGTAGCAAACTAACTGTT+GGG - chr6_1:96926546-96926565 Msa0900710:intron 30.0%
! TTTTTACCGTAGGAATTGTA+TGG + chr6_1:96926737-96926756 None:intergenic 30.0%
! GGCTTTTACTAAATAAATGG+TGG + chr6_1:96926765-96926784 None:intergenic 30.0%
TCACAAAAGTGACTTTAAGT+GGG + chr6_1:96926844-96926863 None:intergenic 30.0%
TTCACAAAAGTGACTTTAAG+TGG + chr6_1:96926845-96926864 None:intergenic 30.0%
AACATCTGCTAAATTGTGTT+TGG - chr6_1:96926930-96926949 Msa0900710:intron 30.0%
TACTACAGAAGCTGAATATA+TGG + chr6_1:96927175-96927194 None:intergenic 30.0%
GATAAAAGAAGATCTACTAC+TGG + chr6_1:96927267-96927286 None:intergenic 30.0%
!!! TATGTTGATTCAGATTTTGC+AGG + chr6_1:96927297-96927316 None:intergenic 30.0%
GGATTGGAATTTATTGTCAA+AGG + chr6_1:96927321-96927340 None:intergenic 30.0%
TACATATCATGGCATACATA+AGG - chr6_1:96927475-96927494 Msa0900710:intron 30.0%
AGATCAAGTCCAAGAATTAA+AGG + chr6_1:96927772-96927791 None:intergenic 30.0%
ACCTATTGTAGTATGTACAA+TGG - chr6_1:96927859-96927878 Msa0900710:intron 30.0%
ACCATTGTACATACTACAAT+AGG + chr6_1:96927863-96927882 None:intergenic 30.0%
AATTAAGTCTGTTGTATCCA+AGG - chr6_1:96927886-96927905 Msa0900710:intron 30.0%
! TTTTAGACCGTACATAGATT+TGG - chr6_1:96927956-96927975 Msa0900710:intron 30.0%
!! GTAAAAACTGCTTTTCTCAA+TGG + chr6_1:96928062-96928081 None:intergenic 30.0%
CCTTACATAGAAACAAAACT+TGG + chr6_1:96928322-96928341 None:intergenic 30.0%
!!! CCAAGTTTTGTTTCTATGTA+AGG - chr6_1:96928319-96928338 Msa0900710:intron 30.0%
! TTGTCTTTTAACAGAAGAAG+GGG + chr6_1:96928423-96928442 None:intergenic 30.0%
!! ATCTAGCTTTGTTCTTTCTT+GGG - chr6_1:96928772-96928791 Msa0900710:intron 30.0%
TATTCTTCCTTACATGTGTT+CGG + chr6_1:96928824-96928843 None:intergenic 30.0%
ACATGTAAGGAAGAATAATC+AGG - chr6_1:96928827-96928846 Msa0900710:intron 30.0%
!! AATTGGTTTGAAAACACCAA+TGG + chr6_1:96928873-96928892 None:intergenic 30.0%
CTAACATTCTGCAAATATGA+GGG + chr6_1:96929076-96929095 None:intergenic 30.0%
TCTAACATTCTGCAAATATG+AGG + chr6_1:96929077-96929096 None:intergenic 30.0%
TAATATATACATGCTTGTGG+GGG + chr6_1:96929566-96929585 None:intergenic 30.0%
TTTATTGTCTATTGGGCAAT+TGG + chr6_1:96929680-96929699 None:intergenic 30.0%
TACTATTCGCAAAATACAAG+GGG + chr6_1:96929731-96929750 None:intergenic 30.0%
GTACTATTCGCAAAATACAA+GGG + chr6_1:96929732-96929751 None:intergenic 30.0%
! ATCAAAATAAAGGCACATGA+TGG + chr6_1:96929754-96929773 None:intergenic 30.0%
AATTTCAAATGCTACAGTTG+TGG + chr6_1:96930078-96930097 None:intergenic 30.0%
!! ATGAGTTGATCATATGAATC+AGG - chr6_1:96930306-96930325 Msa0900710:intron 30.0%
TGCTCTTATTAAATTGTACG+AGG + chr6_1:96930508-96930527 None:intergenic 30.0%
GTGGAAATTAAAGATAAGGT+CGG + chr6_1:96930700-96930719 None:intergenic 30.0%
CACTGTGGAAATTAAAGATA+AGG + chr6_1:96930704-96930723 None:intergenic 30.0%
! TTTTTACCGTAGGAATTGTA+TGG + chr6_1:96926737-96926756 None:intergenic 30.0%
! GGCTTTTACTAAATAAATGG+TGG + chr6_1:96926765-96926784 None:intergenic 30.0%
CACTATAAGTTGTGGTTAAA+AGG + chr6_1:96931270-96931289 None:intergenic 30.0%
! CTTTTAACCACAACTTATAG+TGG - chr6_1:96931268-96931287 Msa0900710:intron 30.0%
AAGTTATCCACTATAAGTTG+TGG + chr6_1:96931278-96931297 None:intergenic 30.0%
!!! CTATTTTGATTAAGCTGGAT+GGG + chr6_1:96931305-96931324 None:intergenic 30.0%
!!! TCTATTTTGATTAAGCTGGA+TGG + chr6_1:96931306-96931325 None:intergenic 30.0%
!!! CAACTCTATTTTGATTAAGC+TGG + chr6_1:96931310-96931329 None:intergenic 30.0%
!!! TTGATAATTATTTTGGCGCA+CGG - chr6_1:96931331-96931350 Msa0900710:intron 30.0%
CTAAACTAAGCTAATCGAAA+CGG + chr6_1:96931358-96931377 None:intergenic 30.0%
!! CAGGTTGAATTTTAAGTGTT+TGG + chr6_1:96931730-96931749 None:intergenic 30.0%
CTGATAATTGATAAACTAGC+AGG + chr6_1:96931749-96931768 None:intergenic 30.0%
AGTGTATGTCTTGGTTATAT+AGG - chr6_1:96931970-96931989 Msa0900710:CDS 30.0%
ATGTCTTGGTTATATAGGTA+TGG - chr6_1:96931975-96931994 Msa0900710:CDS 30.0%
TGTCTTGGTTATATAGGTAT+GGG - chr6_1:96931976-96931995 Msa0900710:CDS 30.0%
!! ATTGATGGCTTTTCTAATCT+TGG + chr6_1:96932075-96932094 None:intergenic 30.0%
! CTAATAGTTGCTTGCATTTT+TGG + chr6_1:96932132-96932151 None:intergenic 30.0%
AATCAACTTGATGAGAAAGA+TGG - chr6_1:96932266-96932285 Msa0900710:CDS 30.0%
GAAAGATGGTTCAAAATCTT+AGG - chr6_1:96932280-96932299 Msa0900710:CDS 30.0%
ATTTGGAGAAGCTATAGGAA+TGG + chr6_1:96923905-96923924 None:intergenic 35.0%
GAGAAATTTGGAGAAGCTAT+AGG + chr6_1:96923910-96923929 None:intergenic 35.0%
AAAAGATGAACCAGTTGTGA+AGG - chr6_1:96924116-96924135 Msa0900710:three_prime_UTR 35.0%
AGATTATCAACCTTCACAAC+TGG + chr6_1:96924129-96924148 None:intergenic 35.0%
! TTTTCATTGCCAGTGAAAGA+TGG - chr6_1:96924159-96924178 Msa0900710:CDS 35.0%
AAAGTAACACCATAGCTTAG+AGG + chr6_1:96924192-96924211 None:intergenic 35.0%
ATGCTACCAGAAAATTCATG+TGG + chr6_1:96924216-96924235 None:intergenic 35.0%
!! ACATGAATTTTCTGGTAGCA+TGG - chr6_1:96924215-96924234 Msa0900710:CDS 35.0%
AGAAGAAGAGTGATCTTGAT+TGG - chr6_1:96924295-96924314 Msa0900710:intron 35.0%
GAAGAAGAGTGATCTTGATT+GGG - chr6_1:96924296-96924315 Msa0900710:intron 35.0%
TAGTAATGCTTACACCAATC+AGG - chr6_1:96924413-96924432 Msa0900710:intron 35.0%
GTTGTATATCCAAACCTGAT+TGG + chr6_1:96924430-96924449 None:intergenic 35.0%
TTCTTTAGCCGGTAAAACAT+TGG - chr6_1:96924711-96924730 Msa0900710:intron 35.0%
AAAAGTCATGCAGTTTCATG+CGG + chr6_1:96924908-96924927 None:intergenic 35.0%
TGAAATCAGGTTCAAAAAGG+AGG - chr6_1:96924988-96925007 Msa0900710:intron 35.0%
CCACCATTTATCTTATCTGA+AGG + chr6_1:96925033-96925052 None:intergenic 35.0%
CCTTCAGATAAGATAAATGG+TGG - chr6_1:96925030-96925049 Msa0900710:intron 35.0%
GATAAGATAAATGGTGGCAA+TGG - chr6_1:96925036-96925055 Msa0900710:intron 35.0%
! TACGAACGATGGTTTGTAAT+TGG - chr6_1:96925234-96925253 Msa0900710:intron 35.0%
! TGGTTTGTAATTGGTTGACA+CGG - chr6_1:96925243-96925262 Msa0900710:intron 35.0%
AGCGCATCAAAATTAATCTC+CGG - chr6_1:96925285-96925304 Msa0900710:intron 35.0%
GAAGTCATGAATTACTACGA+CGG - chr6_1:96925333-96925352 Msa0900710:intron 35.0%
! TTACTTACTGACTGCATCAA+GGG + chr6_1:96925551-96925570 None:intergenic 35.0%
! TTTACTTACTGACTGCATCA+AGG + chr6_1:96925552-96925571 None:intergenic 35.0%
! AATGAACAGGTTGAATCAAC+CGG + chr6_1:96925795-96925814 None:intergenic 35.0%
AAGTTGAATCATGGTTGAAC+CGG + chr6_1:96925869-96925888 None:intergenic 35.0%
! TTGAACCATGATTTGGGATT+CGG - chr6_1:96925890-96925909 Msa0900710:intron 35.0%
GGATTTACTCCATCATAAGA+TGG - chr6_1:96926196-96926215 Msa0900710:intron 35.0%
CAACAAGAATGGTTTCTAAC+AGG - chr6_1:96926380-96926399 Msa0900710:intron 35.0%
! AATTTTCTAGGTGGATGTAC+TGG + chr6_1:96926412-96926431 None:intergenic 35.0%
GACTCTGATTTATATAGCAG+TGG - chr6_1:96926670-96926689 Msa0900710:intron 35.0%
TCTCTTCCATACAATTCCTA+CGG - chr6_1:96926728-96926747 Msa0900710:intron 35.0%
GAAATGGTCAACACCATAAA+AGG + chr6_1:96926786-96926805 None:intergenic 35.0%
! ATACCATTTTGTTCGAGAAG+TGG + chr6_1:96926992-96927011 None:intergenic 35.0%
TTTGTTCTCGAATGAAAGAC+TGG - chr6_1:96927027-96927046 Msa0900710:intron 35.0%
AAAGACTAATGGAAGAACTC+GGG + chr6_1:96927116-96927135 None:intergenic 35.0%
CAAAGACTAATGGAAGAACT+CGG + chr6_1:96927117-96927136 None:intergenic 35.0%
TATGAATCCTAGCAATGAAG+CGG + chr6_1:96927547-96927566 None:intergenic 35.0%
ATTGCTAGGATTCATACTTG+AGG - chr6_1:96927551-96927570 Msa0900710:intron 35.0%
TTCACCGAGATAGAAAAGAT+AGG + chr6_1:96927683-96927702 None:intergenic 35.0%
! ATCCCTAAAATCTTGTTTGC+TGG - chr6_1:96927708-96927727 Msa0900710:intron 35.0%
! ATTAAAGGCACAATTGGCTA+GGG + chr6_1:96927757-96927776 None:intergenic 35.0%
! AATTAAAGGCACAATTGGCT+AGG + chr6_1:96927758-96927777 None:intergenic 35.0%
! CCAAGAATTAAAGGCACAAT+TGG + chr6_1:96927763-96927782 None:intergenic 35.0%
CCAATTGTGCCTTTAATTCT+TGG - chr6_1:96927760-96927779 Msa0900710:intron 35.0%
TTCTTGGACTTGATCTTTGT+TGG - chr6_1:96927776-96927795 Msa0900710:intron 35.0%
TCTTGGACTTGATCTTTGTT+GGG - chr6_1:96927777-96927796 Msa0900710:intron 35.0%
! GATTCTTTCATAGTTAGCCT+TGG + chr6_1:96927906-96927925 None:intergenic 35.0%
AATCTCTTGTACCAACATCT+AGG - chr6_1:96927927-96927946 Msa0900710:intron 35.0%
! ATCTATGTACGGTCTAAAAC+AGG + chr6_1:96927955-96927974 None:intergenic 35.0%
AGGTTGACCAAATCTATGTA+CGG + chr6_1:96927966-96927985 None:intergenic 35.0%
!! GAAAGGAAAACTTGGTTTGT+AGG + chr6_1:96927986-96928005 None:intergenic 35.0%
ATATATATGCTCCAACCAGA+AGG + chr6_1:96928023-96928042 None:intergenic 35.0%
CATTGCCAAAACTATTCTGA+TGG - chr6_1:96928118-96928137 Msa0900710:intron 35.0%
! CACTACCATCAGAATAGTTT+TGG + chr6_1:96928126-96928145 None:intergenic 35.0%
TTTGTATTGTTGGACTCATC+TGG - chr6_1:96928518-96928537 Msa0900710:intron 35.0%
!! GATCTAGCTTTGTTCTTTCT+TGG - chr6_1:96928771-96928790 Msa0900710:intron 35.0%
TGTAAGGAAGAATAATCAGG+TGG - chr6_1:96928830-96928849 Msa0900710:intron 35.0%
TGAAAACACCAATGGAGATT+TGG + chr6_1:96928865-96928884 None:intergenic 35.0%
TTCAAACCAATTGCAGTTGA+TGG - chr6_1:96928881-96928900 Msa0900710:intron 35.0%
AATGGAGGAGAATATGTAGA+TGG + chr6_1:96929106-96929125 None:intergenic 35.0%
AAGTGCTTAAGAACAGACAA+TGG + chr6_1:96929124-96929143 None:intergenic 35.0%
! CAAGGAATTTAAAGCACAAG+TGG + chr6_1:96929170-96929189 None:intergenic 35.0%
! CATTTATTGATGACCACTCT+AGG + chr6_1:96929243-96929262 None:intergenic 35.0%
! AAAATATTTTGCTCCTCCCA+TGG - chr6_1:96929267-96929286 Msa0900710:intron 35.0%
CTTGATACATTCTGATGTGT+GGG + chr6_1:96929308-96929327 None:intergenic 35.0%
ACTTGATACATTCTGATGTG+TGG + chr6_1:96929309-96929328 None:intergenic 35.0%
TTTGCTTCTAGTAGTTACTC+TGG - chr6_1:96929339-96929358 Msa0900710:intron 35.0%
AAGAAGAAACGACAATGATG+TGG + chr6_1:96929501-96929520 None:intergenic 35.0%
! ACATCATTGTCGTTTCTTCT+TGG - chr6_1:96929500-96929519 Msa0900710:intron 35.0%
GGTACTATTCGCAAAATACA+AGG + chr6_1:96929733-96929752 None:intergenic 35.0%
ATCACACCTTAGAAGTTGTT+GGG + chr6_1:96929786-96929805 None:intergenic 35.0%
GATGGAGAAATCTTGTATAG+CGG + chr6_1:96929952-96929971 None:intergenic 35.0%
CAAGATTTCTCCATCATCTA+AGG - chr6_1:96929957-96929976 Msa0900710:CDS 35.0%
TGTTGGAACAACAAAAGGAA+TGG + chr6_1:96930030-96930049 None:intergenic 35.0%
!! TATGAGAGGGCATTATAAGA+GGG + chr6_1:96930055-96930074 None:intergenic 35.0%
GTAGATCAAAATCTCAGAGA+AGG + chr6_1:96930104-96930123 None:intergenic 35.0%
AGAATCTAGACGCAAGAATA+AGG + chr6_1:96930214-96930233 None:intergenic 35.0%
!!! CTTCATTTTGATGATGTTGC+TGG + chr6_1:96930252-96930271 None:intergenic 35.0%
TTCAGCTATTGTGAAATCTG+AGG - chr6_1:96930362-96930381 Msa0900710:intron 35.0%
CTGAGCAAATAGTGTATTCA+TGG - chr6_1:96930392-96930411 Msa0900710:intron 35.0%
! TGCTAATTTGCACTTAGCAA+TGG + chr6_1:96930586-96930605 None:intergenic 35.0%
TGATCAAAAGTGGAAAGAGA+TGG + chr6_1:96930622-96930641 None:intergenic 35.0%
CAGATATCACTGATCAAAAG+TGG + chr6_1:96930632-96930651 None:intergenic 35.0%
! TTTTGATCAGTGATATCTGC+AGG - chr6_1:96930633-96930652 Msa0900710:intron 35.0%
AATTGCCTAGATGCAATTGA+TGG + chr6_1:96930663-96930682 None:intergenic 35.0%
GACTCTGATTTATATAGCAG+TGG - chr6_1:96926670-96926689 Msa0900710:intron 35.0%
TCTCTTCCATACAATTCCTA+CGG - chr6_1:96926728-96926747 Msa0900710:intron 35.0%
GAAATGGTCAACACCATAAA+AGG + chr6_1:96926786-96926805 None:intergenic 35.0%
TAAGAGATAAGCCACCTTAT+GGG + chr6_1:96931809-96931828 None:intergenic 35.0%
GACATACACTCTTGTTAAGT+TGG + chr6_1:96931960-96931979 None:intergenic 35.0%
! CTTAACAAGAGTGTATGTCT+TGG - chr6_1:96931961-96931980 Msa0900710:CDS 35.0%
GTCTTGGTTATATAGGTATG+GGG - chr6_1:96931977-96931996 Msa0900710:CDS 35.0%
ATTTAACACAGATGAAGGCA+TGG - chr6_1:96932180-96932199 Msa0900710:CDS 35.0%
AAAATCTTAGGGAGCAATGT+TGG - chr6_1:96932292-96932311 Msa0900710:CDS 35.0%
!!! GGTTTTTTCCATTGGTGGTA+GGG + chr6_1:96923884-96923903 None:intergenic 40.0%
!!! TGGTTTTTTCCATTGGTGGT+AGG + chr6_1:96923885-96923904 None:intergenic 40.0%
!!! GGAATGGTTTTTTCCATTGG+TGG + chr6_1:96923889-96923908 None:intergenic 40.0%
GAAGCACATGAACTTACACA+AGG - chr6_1:96924006-96924025 Msa0900710:three_prime_UTR 40.0%
CTTTCACTGGCAATGAAAAG+AGG + chr6_1:96924158-96924177 None:intergenic 40.0%
!! ATTTTCTGGTAGCATGGCTT+TGG - chr6_1:96924221-96924240 Msa0900710:CDS 40.0%
TTTCTTGCTAAGGCTATTGC+TGG - chr6_1:96924354-96924373 Msa0900710:intron 40.0%
TGGAACTGGTCAGATTGTTA+AGG - chr6_1:96924377-96924396 Msa0900710:intron 40.0%
GGAACTGGTCAGATTGTTAA+GGG - chr6_1:96924378-96924397 Msa0900710:intron 40.0%
ATGCTTACACCAATCAGGTT+TGG - chr6_1:96924418-96924437 Msa0900710:intron 40.0%
!!! CTTGTTTTGGCTTCTTTAGC+CGG - chr6_1:96924700-96924719 Msa0900710:intron 40.0%
!! TCATTTTGATCAAGCGATCG+TGG + chr6_1:96924804-96924823 None:intergenic 40.0%
! CATCGTTCGTATGACTTTTC+AGG + chr6_1:96925225-96925244 None:intergenic 40.0%
CTGAAAAGTCATACGAACGA+TGG - chr6_1:96925223-96925242 Msa0900710:intron 40.0%
!! TTAATTTTGATGCGCTGTCG+TGG + chr6_1:96925281-96925300 None:intergenic 40.0%
! AATGGTGTTGGAATAGTGAG+TGG - chr6_1:96925445-96925464 Msa0900710:intron 40.0%
TTTACATAACCTGACCGAAC+TGG - chr6_1:96925668-96925687 Msa0900710:intron 40.0%
CTTAATTGAACCGACCAGTT+CGG + chr6_1:96925685-96925704 None:intergenic 40.0%
! TGGTCGGTTCAATTAAGAAC+CGG - chr6_1:96925688-96925707 Msa0900710:intron 40.0%
CAAATCGTAGTCGAACTAAC+AGG + chr6_1:96925723-96925742 None:intergenic 40.0%
! ATGAACAGGTTGAATCAACC+GGG + chr6_1:96925794-96925813 None:intergenic 40.0%
!! GGCGGATAGAGTTTGTTTTT+CGG + chr6_1:96926347-96926366 None:intergenic 40.0%
AACCATTCTTGTTGCAGCTT+GGG + chr6_1:96926374-96926393 None:intergenic 40.0%
AAACCATTCTTGTTGCAGCT+TGG + chr6_1:96926375-96926394 None:intergenic 40.0%
TTCGAGAAGTGGTAGAGAAA+GGG + chr6_1:96926981-96927000 None:intergenic 40.0%
CTACCACTTCTCGAACAAAA+TGG - chr6_1:96926986-96927005 Msa0900710:intron 40.0%
AAGCATGCAAGGAAGCTATT+TGG + chr6_1:96927143-96927162 None:intergenic 40.0%
!! GTCTGGTCTTGTACATATCA+TGG - chr6_1:96927464-96927483 Msa0900710:intron 40.0%
ATGAATCCTAGCAATGAAGC+GGG + chr6_1:96927546-96927565 None:intergenic 40.0%
ATAGGAAGTGGGGTAGATAT+TGG - chr6_1:96927588-96927607 Msa0900710:intron 40.0%
! GGCCAGCAAACAAGATTTTA+GGG + chr6_1:96927713-96927732 None:intergenic 40.0%
GTTGTATGTGGATGACATGT+TGG + chr6_1:96927811-96927830 None:intergenic 40.0%
AGAACACGGAAAGGAAAACT+TGG + chr6_1:96927994-96928013 None:intergenic 40.0%
!!! AGGTTTTGAAGAACACGGAA+AGG + chr6_1:96928003-96928022 None:intergenic 40.0%
!!! CCAGAAGGTTTTGAAGAACA+CGG + chr6_1:96928008-96928027 None:intergenic 40.0%
GTTCTTCAAAACCTTCTGGT+TGG - chr6_1:96928009-96928028 Msa0900710:intron 40.0%
! ATGGTAGTGAGTCTAACAAC+TGG - chr6_1:96928137-96928156 Msa0900710:intron 40.0%
! TGGTAGTGAGTCTAACAACT+GGG - chr6_1:96928138-96928157 Msa0900710:intron 40.0%
! AAAGGGTATGCTCAGAAAGA+AGG + chr6_1:96928188-96928207 None:intergenic 40.0%
! GAACTTGTTCAACTTCCCAA+GGG + chr6_1:96928299-96928318 None:intergenic 40.0%
CATTACATAGTCTGAATGCC+AGG - chr6_1:96928460-96928479 Msa0900710:intron 40.0%
TCGTCGAACGTTTGTATTGT+TGG - chr6_1:96928508-96928527 Msa0900710:intron 40.0%
TCATCTGGTGCTTGTTCATA+TGG - chr6_1:96928533-96928552 Msa0900710:intron 40.0%
AGTACATCCGAACACATGTA+AGG - chr6_1:96928814-96928833 Msa0900710:intron 40.0%
AGATCGATTGATCACGTAAC+AGG - chr6_1:96928904-96928923 Msa0900710:intron 40.0%
ACATGGCTCTTGTTCTATCT+AGG - chr6_1:96928978-96928997 Msa0900710:intron 40.0%
TGCTTAAGAACAGACAATGG+AGG + chr6_1:96929121-96929140 None:intergenic 40.0%
GCACAAGTGGAACTTGAAAA+TGG + chr6_1:96929157-96929176 None:intergenic 40.0%
! TGACCACTCTAGGAGATTAT+GGG + chr6_1:96929233-96929252 None:intergenic 40.0%
! ATGACCACTCTAGGAGATTA+TGG + chr6_1:96929234-96929253 None:intergenic 40.0%
GAGTCACCACAAATATCCAT+GGG + chr6_1:96929286-96929305 None:intergenic 40.0%
TCAAACCACGTTCTGACATA+TGG - chr6_1:96929461-96929480 Msa0900710:intron 40.0%
ATGATGTGGCATCACAAACT+AGG + chr6_1:96929487-96929506 None:intergenic 40.0%
TTAAGTTTCCACCTTCAGTG+TGG - chr6_1:96929635-96929654 Msa0900710:intron 40.0%
ACCAATCCCAACAACTTCTA+AGG - chr6_1:96929777-96929796 Msa0900710:intron 40.0%
ACCTTAGAAGTTGTTGGGAT+TGG + chr6_1:96929781-96929800 None:intergenic 40.0%
GATCACACCTTAGAAGTTGT+TGG + chr6_1:96929787-96929806 None:intergenic 40.0%
TCGGAAGGATCTGTATTCAT+GGG + chr6_1:96929814-96929833 None:intergenic 40.0%
AATACAGATCCTTCCGAGAT+AGG - chr6_1:96929817-96929836 Msa0900710:intron 40.0%
!! GCAGCAATTAGTTCTAAAGG+TGG + chr6_1:96929928-96929947 None:intergenic 40.0%
!! GGAGCAGCAATTAGTTCTAA+AGG + chr6_1:96929931-96929950 None:intergenic 40.0%
GTTGCAAGTACCTTAGATGA+TGG + chr6_1:96929970-96929989 None:intergenic 40.0%
!! GTATGAGAGGGCATTATAAG+AGG + chr6_1:96930056-96930075 None:intergenic 40.0%
AAGGATAGAAAAGCAAGCAG+AGG + chr6_1:96930187-96930206 None:intergenic 40.0%
GACGCAAGAATAAGGAAGAA+AGG + chr6_1:96930206-96930225 None:intergenic 40.0%
AAAGTCTGCAAAGGAGATCT+GGG + chr6_1:96930532-96930551 None:intergenic 40.0%
AAAAGTCTGCAAAGGAGATC+TGG + chr6_1:96930533-96930552 None:intergenic 40.0%
TGCAGAGAAAAAGTCTGCAA+AGG + chr6_1:96930541-96930560 None:intergenic 40.0%
GTCTACCATCAATTGCATCT+AGG - chr6_1:96930655-96930674 Msa0900710:intron 40.0%
ATGGGAGTAATTTCTCACTG+TGG + chr6_1:96930719-96930738 None:intergenic 40.0%
!!! TTGTTGCCATGGTTTTGAAC+CGG - chr6_1:96930760-96930779 Msa0900710:CDS 40.0%
TGTAATCCGGTTCAAAACCA+TGG + chr6_1:96930769-96930788 None:intergenic 40.0%
CACGGTGAAATAGTGTAATC+CGG + chr6_1:96930782-96930801 None:intergenic 40.0%
ATGGTTACTATTCTCACGTG+TGG + chr6_1:96930896-96930915 None:intergenic 40.0%
ACCATGAACAATAATCGCAG+CGG - chr6_1:96930911-96930930 Msa0900710:intron 40.0%
AAGAGATAAGCCACCTTATG+GGG + chr6_1:96931808-96931827 None:intergenic 40.0%
CTAAGAGATAAGCCACCTTA+TGG + chr6_1:96931810-96931829 None:intergenic 40.0%
!! TTCCATTGGTGGTAGGGTTT+TGG + chr6_1:96923878-96923897 None:intergenic 45.0%
AATACTAACCAATGCCCCCA+AGG - chr6_1:96924617-96924636 Msa0900710:intron 45.0%
GATAAATGGTGGCAATGGCA+TGG - chr6_1:96925041-96925060 Msa0900710:intron 45.0%
ATCTTAAGGAATGCCTGTCC+TGG + chr6_1:96925502-96925521 None:intergenic 45.0%
! GGTCGGTTCAATTAAGAACC+GGG - chr6_1:96925689-96925708 Msa0900710:intron 45.0%
! TGTTTCAAGTCGATGACGAC+TGG - chr6_1:96925741-96925760 Msa0900710:intron 45.0%
GACATCCGAATCCCAAATCA+TGG + chr6_1:96925898-96925917 None:intergenic 45.0%
! CAAGGTTTTTGATGCAGCAG+AGG - chr6_1:96926318-96926337 Msa0900710:intron 45.0%
! GGTGGTAGAGTTTTTACCGT+AGG + chr6_1:96926747-96926766 None:intergenic 45.0%
TGAACTTTCGATCATGCCGT+AGG - chr6_1:96926861-96926880 Msa0900710:intron 45.0%
GTTCGAGAAGTGGTAGAGAA+AGG + chr6_1:96926982-96927001 None:intergenic 45.0%
AGAGTGCATTGCACATTGCA+AGG + chr6_1:96927056-96927075 None:intergenic 45.0%
TATGTGTTCACACTTGCAGG+AGG + chr6_1:96927243-96927262 None:intergenic 45.0%
GGTTATGTGTTCACACTTGC+AGG + chr6_1:96927246-96927265 None:intergenic 45.0%
!! AGATCCTGGTAAAGAGCACT+GGG + chr6_1:96927406-96927425 None:intergenic 45.0%
! AGTCGATTTATGGCAGATCC+TGG + chr6_1:96927420-96927439 None:intergenic 45.0%
TGAATCCTAGCAATGAAGCG+GGG + chr6_1:96927545-96927564 None:intergenic 45.0%
! GGGCCAGCAAACAAGATTTT+AGG + chr6_1:96927714-96927733 None:intergenic 45.0%
AGTTCGAGATGAAGGACTTG+GGG + chr6_1:96927734-96927753 None:intergenic 45.0%
GAGTTCGAGATGAAGGACTT+GGG + chr6_1:96927735-96927754 None:intergenic 45.0%
GTATGTGGATGACATGTTGG+TGG + chr6_1:96927808-96927827 None:intergenic 45.0%
TAAAACAGGCGCCTAGATGT+TGG + chr6_1:96927941-96927960 None:intergenic 45.0%
CCGTGTTCTTCAAAACCTTC+TGG - chr6_1:96928005-96928024 Msa0900710:intron 45.0%
GGTAGTGAGTCTAACAACTG+GGG - chr6_1:96928139-96928158 Msa0900710:intron 45.0%
GTGCAAGACTGGTGGTTAAA+GGG + chr6_1:96928205-96928224 None:intergenic 45.0%
AGAACGATATCGTGCAAGAC+TGG + chr6_1:96928216-96928235 None:intergenic 45.0%
GTATACCCATTTGTTCCCGA+TGG - chr6_1:96928265-96928284 Msa0900710:intron 45.0%
GAAAGCCATCGGGAACAAAT+GGG + chr6_1:96928273-96928292 None:intergenic 45.0%
TTGTTCAACTTCCCAAGGGT+CGG + chr6_1:96928295-96928314 None:intergenic 45.0%
! GGAACTTGTTCAACTTCCCA+AGG + chr6_1:96928300-96928319 None:intergenic 45.0%
GGCAGCAATGCATGAAGAAA+TGG + chr6_1:96928348-96928367 None:intergenic 45.0%
CTCAGATGTTTCTCTGTGGA+TGG + chr6_1:96928369-96928388 None:intergenic 45.0%
GAAGCTCAGATGTTTCTCTG+TGG + chr6_1:96928373-96928392 None:intergenic 45.0%
GTCAGATTATAACACCAGCC+TGG + chr6_1:96928481-96928500 None:intergenic 45.0%
CTCTACTGCAGCAGTTTCTT+TGG - chr6_1:96928598-96928617 Msa0900710:intron 45.0%
AACAACAAGCTTGTGAGCAG+TGG - chr6_1:96928682-96928701 Msa0900710:intron 45.0%
ACAACAAGCTTGTGAGCAGT+GGG - chr6_1:96928683-96928702 Msa0900710:intron 45.0%
GTTATGCTGACAACGTGAAG+GGG + chr6_1:96928724-96928743 None:intergenic 45.0%
GGTTATGCTGACAACGTGAA+GGG + chr6_1:96928725-96928744 None:intergenic 45.0%
CGATCTCCATCAACTGCAAT+TGG + chr6_1:96928890-96928909 None:intergenic 45.0%
AGGAGTGGCTAAGTCTTTCT+GGG + chr6_1:96928948-96928967 None:intergenic 45.0%
TCTGCTACACCATTCTGTTG+AGG - chr6_1:96929019-96929038 Msa0900710:intron 45.0%
ACACCCATAATCTCCTAGAG+TGG - chr6_1:96929227-96929246 Msa0900710:intron 45.0%
TCACCACAAATATCCATGGG+AGG + chr6_1:96929283-96929302 None:intergenic 45.0%
GGAGTCACCACAAATATCCA+TGG + chr6_1:96929287-96929306 None:intergenic 45.0%
CAAATTCACTGTCTTGAGCC+CGG - chr6_1:96929411-96929430 Msa0900710:intron 45.0%
AAATTCACTGTCTTGAGCCC+GGG - chr6_1:96929412-96929431 Msa0900710:intron 45.0%
CGGAACAAAATCTTCTACCC+GGG + chr6_1:96929432-96929451 None:intergenic 45.0%
GCGGAACAAAATCTTCTACC+CGG + chr6_1:96929433-96929452 None:intergenic 45.0%
ACGTGGTTTGAAAGCTCTTG+CGG + chr6_1:96929452-96929471 None:intergenic 45.0%
AGTAGTAAAGGGAAACCTCG+TGG + chr6_1:96929614-96929633 None:intergenic 45.0%
ATTGGGCAATTGGATGACCT+CGG + chr6_1:96929670-96929689 None:intergenic 45.0%
CTCGGAAGGATCTGTATTCA+TGG + chr6_1:96929815-96929834 None:intergenic 45.0%
TCCTTCCGAGATAGGTTCAT+AGG - chr6_1:96929825-96929844 Msa0900710:intron 45.0%
ACCTATGAACCTATCTCGGA+AGG + chr6_1:96929829-96929848 None:intergenic 45.0%
CTGCACCTATGAACCTATCT+CGG + chr6_1:96929833-96929852 None:intergenic 45.0%
ATATGACTCCACGCAAGGAT+TGG + chr6_1:96929858-96929877 None:intergenic 45.0%
GCTCAATGATGGTTGGATAG+TGG + chr6_1:96929899-96929918 None:intergenic 45.0%
GAAATGCGCTCAATGATGGT+TGG + chr6_1:96929906-96929925 None:intergenic 45.0%
ACTTGCAACACAACCTTGAG+AGG - chr6_1:96929981-96930000 Msa0900710:intron 45.0%
!! GGGAGTGTTGGAACAACAAA+AGG + chr6_1:96930035-96930054 None:intergenic 45.0%
! GGCATTATAAGAGGGAGTGT+TGG + chr6_1:96930047-96930066 None:intergenic 45.0%
GCTACAGTTGTGGTATGAGA+GGG + chr6_1:96930068-96930087 None:intergenic 45.0%
TGCTACAGTTGTGGTATGAG+AGG + chr6_1:96930069-96930088 None:intergenic 45.0%
TCTAGTGAGAGTCAAGATCG+TGG + chr6_1:96930126-96930145 None:intergenic 45.0%
GCACTTAGCAATGGCAGATT+CGG + chr6_1:96930577-96930596 None:intergenic 45.0%
TCCGCTGCGATTATTGTTCA+TGG + chr6_1:96930915-96930934 None:intergenic 45.0%
! AACAGTGGTATCAGAGCACT+TGG + chr6_1:96930952-96930971 None:intergenic 45.0%
AAGTGCTCTGATACCACTGT+TGG - chr6_1:96930951-96930970 Msa0900710:intron 45.0%
AGTGCTCTGATACCACTGTT+GGG - chr6_1:96930952-96930971 Msa0900710:intron 45.0%
GCTATTCTGATACCCAACAG+TGG + chr6_1:96926561-96926580 None:intergenic 45.0%
! GGTGGTAGAGTTTTTACCGT+AGG + chr6_1:96926747-96926766 None:intergenic 45.0%
TATAGGTATGGGGAAGAAGC+AGG - chr6_1:96931987-96932006 Msa0900710:CDS 45.0%
ATAGGTATGGGGAAGAAGCA+GGG - chr6_1:96931988-96932007 Msa0900710:CDS 45.0%
GAGCATGTATTTGCAACTGC+AGG - chr6_1:96932020-96932039 Msa0900710:CDS 45.0%
GACATGCTGCTAATACTGCT+TGG - chr6_1:96932042-96932061 Msa0900710:CDS 45.0%
TGCACTAGAAGCTGGATTGA+TGG + chr6_1:96932090-96932109 None:intergenic 45.0%
!!! TTTAAAAATTAAAATTTTCT+AGG + chr6_1:96926424-96926443 None:intergenic 5.0%
!!! TGGTGGTAGGGTTTTGGAGT+CGG + chr6_1:96923872-96923891 None:intergenic 50.0%
CTCCAAAACCCTACCACCAA+TGG - chr6_1:96923873-96923892 Msa0900710:three_prime_UTR 50.0%
GGCTCATGACCATCTTTCAC+TGG + chr6_1:96924171-96924190 None:intergenic 50.0%
GGTCATGAGCCTCTAAGCTA+TGG - chr6_1:96924180-96924199 Msa0900710:CDS 50.0%
CTTGCTAAGGCTATTGCTGG+TGG - chr6_1:96924357-96924376 Msa0900710:intron 50.0%
AAGGCTATTGCTGGTGGAAC+TGG - chr6_1:96924363-96924382 Msa0900710:intron 50.0%
CCTGGTTGAGATTTGAGGAC+AGG + chr6_1:96925484-96925503 None:intergenic 50.0%
CCTGTCCTCAAATCTCAACC+AGG - chr6_1:96925481-96925500 Msa0900710:intron 50.0%
CCTGTCCTGGTTGAGATTTG+AGG + chr6_1:96925489-96925508 None:intergenic 50.0%
CCTCAAATCTCAACCAGGAC+AGG - chr6_1:96925486-96925505 Msa0900710:intron 50.0%
GCATTCCTTAAGATGCTCCC+AGG - chr6_1:96925508-96925527 Msa0900710:intron 50.0%
AAGCCAACAGAACCTCTCCT+GGG + chr6_1:96925528-96925547 None:intergenic 50.0%
CATAACCTGACCGAACTGGT+CGG - chr6_1:96925672-96925691 Msa0900710:intron 50.0%
AACTAACAGGCAGACTGACC+CGG + chr6_1:96925710-96925729 None:intergenic 50.0%
!! GTTGGAAGTGCTACTCAACC+CGG - chr6_1:96925773-96925792 Msa0900710:intron 50.0%
CATTCTTGTTGCAGCTTGGG+AGG + chr6_1:96926371-96926390 None:intergenic 50.0%
CTCCCAAGCTGCAACAAGAA+TGG - chr6_1:96926369-96926388 Msa0900710:intron 50.0%
ACTTTCGATCATGCCGTAGG+AGG - chr6_1:96926864-96926883 Msa0900710:intron 50.0%
!! ACATGGTGTCGATCCTCCTA+CGG + chr6_1:96926880-96926899 None:intergenic 50.0%
! CAGATCCTGGTAAAGAGCAC+TGG + chr6_1:96927407-96927426 None:intergenic 50.0%
! GGGAGCGGTTAGTCGATTTA+TGG + chr6_1:96927430-96927449 None:intergenic 50.0%
CCAGACATTGCACAAGCAGT+GGG + chr6_1:96927450-96927469 None:intergenic 50.0%
ACCAGACATTGCACAAGCAG+TGG + chr6_1:96927451-96927470 None:intergenic 50.0%
TCGAGTACCCTATGCATCAG+CGG + chr6_1:96927508-96927527 None:intergenic 50.0%
GGAGTTCGAGATGAAGGACT+TGG + chr6_1:96927736-96927755 None:intergenic 50.0%
!! GTGGATGACATGTTGGTGGT+AGG + chr6_1:96927804-96927823 None:intergenic 50.0%
CGTGCAAGACTGGTGGTTAA+AGG + chr6_1:96928206-96928225 None:intergenic 50.0%
ACGATATCGTGCAAGACTGG+TGG + chr6_1:96928213-96928232 None:intergenic 50.0%
GGAAAGCCATCGGGAACAAA+TGG + chr6_1:96928274-96928293 None:intergenic 50.0%
GCTTCTTTCAGCCTCCTGAA+AGG - chr6_1:96928388-96928407 Msa0900710:intron 50.0%
TCAGCCTCCTGAAAGGTTGA+TGG - chr6_1:96928395-96928414 Msa0900710:intron 50.0%
ACATAGTCTGAATGCCAGGC+TGG - chr6_1:96928464-96928483 Msa0900710:intron 50.0%
GGGTTATGCTGACAACGTGA+AGG + chr6_1:96928726-96928745 None:intergenic 50.0%
CAGGAGTGGCTAAGTCTTTC+TGG + chr6_1:96928949-96928968 None:intergenic 50.0%
CATGTTGAGAACAGCAGGAG+TGG + chr6_1:96928963-96928982 None:intergenic 50.0%
CACTCCTGCTGTTCTCAACA+TGG - chr6_1:96928961-96928980 Msa0900710:intron 50.0%
AGAGCCATGTTGAGAACAGC+AGG + chr6_1:96928968-96928987 None:intergenic 50.0%
CCACATACGCCTCAACAGAA+TGG + chr6_1:96929031-96929050 None:intergenic 50.0%
CCATTCTGTTGAGGCGTATG+TGG - chr6_1:96929028-96929047 Msa0900710:intron 50.0%
GCTCCTCCCATGGATATTTG+TGG - chr6_1:96929277-96929296 Msa0900710:intron 50.0%
CTAGGCCATATGTCAGAACG+TGG + chr6_1:96929469-96929488 None:intergenic 50.0%
TCTCTGCTTTCATCACCACG+AGG - chr6_1:96929596-96929615 Msa0900710:CDS 50.0%
TGCAAGATCCACACTGAAGG+TGG + chr6_1:96929646-96929665 None:intergenic 50.0%
TTGGGCAATTGGATGACCTC+GGG + chr6_1:96929669-96929688 None:intergenic 50.0%
! ACAAGGGGTACGTCACGTAA+AGG + chr6_1:96929716-96929735 None:intergenic 50.0%
ATGGCATATGACTCCACGCA+AGG + chr6_1:96929863-96929882 None:intergenic 50.0%
!! GATGGTTGGATAGTGGACTC+AGG + chr6_1:96929892-96929911 None:intergenic 50.0%
GGTGGAAATGCGCTCAATGA+TGG + chr6_1:96929910-96929929 None:intergenic 50.0%
!! TCAGAAGCGTCAACCTCTCA+AGG + chr6_1:96929997-96930016 None:intergenic 50.0%
! GCAAGCAGAGGCTTTAGTGA+TGG + chr6_1:96930175-96930194 None:intergenic 50.0%
AAGCTCGCTCATTCCCCATA+AGG - chr6_1:96931792-96931811 Msa0900710:intron 50.0%
TAGGTATGGGGAAGAAGCAG+GGG - chr6_1:96931989-96932008 Msa0900710:CDS 50.0%
AGTGTAGCTGCACTAGAAGC+TGG + chr6_1:96932098-96932117 None:intergenic 50.0%
TTCCTTAACCGGTGCCTTGG+GGG + chr6_1:96924634-96924653 None:intergenic 55.0%
CTTCCTTAACCGGTGCCTTG+GGG + chr6_1:96924635-96924654 None:intergenic 55.0%
GCTTCCTTAACCGGTGCCTT+GGG + chr6_1:96924636-96924655 None:intergenic 55.0%
TGCTTCCTTAACCGGTGCCT+TGG + chr6_1:96924637-96924656 None:intergenic 55.0%
!! CCTCTCCTGGGAGCATCTTA+AGG + chr6_1:96925516-96925535 None:intergenic 55.0%
CCTTAAGATGCTCCCAGGAG+AGG - chr6_1:96925513-96925532 Msa0900710:intron 55.0%
GAAGCCAACAGAACCTCTCC+TGG + chr6_1:96925529-96925548 None:intergenic 55.0%
TTGAACCGACCAGTTCGGTC+AGG + chr6_1:96925680-96925699 None:intergenic 55.0%
CAAGTCGATGACGACTGGAG+TGG - chr6_1:96925746-96925765 Msa0900710:intron 55.0%
TCTTGTTGCAGCTTGGGAGG+TGG + chr6_1:96926368-96926387 None:intergenic 55.0%
TTGCAGGAGGAGCAGTGAGT+TGG + chr6_1:96927230-96927249 None:intergenic 55.0%
GCATCCCAGTGCTCTTTACC+AGG - chr6_1:96927399-96927418 Msa0900710:intron 55.0%
CATTGCACAAGCAGTGGGAG+CGG + chr6_1:96927445-96927464 None:intergenic 55.0%
CCCACTGCTTGTGCAATGTC+TGG - chr6_1:96927447-96927466 Msa0900710:intron 55.0%
CTTCCCACCGCTGATGCATA+GGG - chr6_1:96927498-96927517 Msa0900710:intron 55.0%
GTACCCTATGCATCAGCGGT+GGG + chr6_1:96927504-96927523 None:intergenic 55.0%
AGTACCCTATGCATCAGCGG+TGG + chr6_1:96927505-96927524 None:intergenic 55.0%
TAGCAATGAAGCGGGGAGGA+TGG + chr6_1:96927538-96927557 None:intergenic 55.0%
ATCCTCCCCGCTTCATTGCT+AGG - chr6_1:96927537-96927556 Msa0900710:intron 55.0%
ATCCTAGCAATGAAGCGGGG+AGG + chr6_1:96927542-96927561 None:intergenic 55.0%
GGCTAGGGAGTTCGAGATGA+AGG + chr6_1:96927742-96927761 None:intergenic 55.0%
GGAGCCATCAACCTTTCAGG+AGG + chr6_1:96928402-96928421 None:intergenic 55.0%
AGGGGAGCCATCAACCTTTC+AGG + chr6_1:96928405-96928424 None:intergenic 55.0%
!! CGTGAAGGGGTATCGCTTGT+GGG + chr6_1:96928711-96928730 None:intergenic 55.0%
!! ACGTGAAGGGGTATCGCTTG+TGG + chr6_1:96928712-96928731 None:intergenic 55.0%
GGGTGCAAGATCCACACTGA+AGG + chr6_1:96929649-96929668 None:intergenic 55.0%
GTGCAGAACCAATCCTTGCG+TGG - chr6_1:96929847-96929866 Msa0900710:intron 55.0%
GCGTGGAGTCATATGCCATG+TGG - chr6_1:96929864-96929883 Msa0900710:intron 55.0%
GATGGCGAGAGGCAGATCAA+CGG + chr6_1:96930157-96930176 None:intergenic 55.0%
! GAGGCTTTAGTGATGGCGAG+AGG + chr6_1:96930168-96930187 None:intergenic 55.0%
CTCGCTCATTCCCCATAAGG+TGG - chr6_1:96931795-96931814 Msa0900710:intron 55.0%
AACCAATGCCCCCAAGGCAC+CGG - chr6_1:96924623-96924642 Msa0900710:intron 60.0%
GCTCCCAGGAGAGGTTCTGT+TGG - chr6_1:96925522-96925541 Msa0900710:intron 60.0%
CGATGACGACTGGAGTGGAC+TGG - chr6_1:96925751-96925770 Msa0900710:intron 60.0%
!! GACGACTGGAGTGGACTGGT+TGG - chr6_1:96925755-96925774 Msa0900710:intron 60.0%
TGTTGCAGCTTGGGAGGTGG+CGG + chr6_1:96926365-96926384 None:intergenic 60.0%
GGCAGCTACGCAAGCATGCA+AGG + chr6_1:96927154-96927173 None:intergenic 60.0%
GCTTCCCACCGCTGATGCAT+AGG - chr6_1:96927497-96927516 Msa0900710:intron 60.0%
CCAAGGGTCGGAAAGCCATC+GGG + chr6_1:96928283-96928302 None:intergenic 60.0%
CCCAAGGGTCGGAAAGCCAT+CGG + chr6_1:96928284-96928303 None:intergenic 60.0%
CCGATGGCTTTCCGACCCTT+GGG - chr6_1:96928281-96928300 Msa0900710:intron 60.0%
CAGTGTGGATCTTGCACCCG+AGG - chr6_1:96929650-96929669 Msa0900710:intron 60.0%
!! TAGTGGACTCAGGCGCCACA+TGG + chr6_1:96929882-96929901 None:intergenic 60.0%
AGAGGCAGATCAACGGAGCG+AGG + chr6_1:96930150-96930169 None:intergenic 60.0%
! AACCGGTGCCTTGGGGGCAT+TGG + chr6_1:96924628-96924647 None:intergenic 65.0%
!! TGCCCCCAAGGCACCGGTTA+AGG - chr6_1:96924629-96924648 Msa0900710:intron 65.0%
CCCGATGGCTTTCCGACCCT+TGG - chr6_1:96928280-96928299 Msa0900710:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 96923859 96932439 96923859 ID=Msa0900710;Name=Msa0900710
chr6_1 mRNA 96923859 96932439 96923859 ID=Msa0900710-mRNA-1;Parent=Msa0900710;Name=Msa0900710-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.75|0.6|1|1|1|5|288|334
chr6_1 exon 96923859 96924306 96923859 ID=Msa0900710-mRNA-1:exon:16861;Parent=Msa0900710-mRNA-1
chr6_1 exon 96929549 96929650 96929549 ID=Msa0900710-mRNA-1:exon:16860;Parent=Msa0900710-mRNA-1
chr6_1 exon 96929897 96929981 96929897 ID=Msa0900710-mRNA-1:exon:16859;Parent=Msa0900710-mRNA-1
chr6_1 exon 96930736 96930876 96930736 ID=Msa0900710-mRNA-1:exon:16858;Parent=Msa0900710-mRNA-1
chr6_1 exon 96931923 96932439 96931923 ID=Msa0900710-mRNA-1:exon:16857;Parent=Msa0900710-mRNA-1
chr6_1 CDS 96931923 96932439 96931923 ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1
chr6_1 CDS 96930736 96930876 96930736 ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1
chr6_1 CDS 96929897 96929981 96929897 ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1
chr6_1 CDS 96929549 96929650 96929549 ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1
chr6_1 CDS 96924147 96924306 96924147 ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1
chr6_1 three_prime_UTR 96923859 96924146 96923859 ID=Msa0900710-mRNA-1:three_prime_utr;Parent=Msa0900710-mRNA-1
Gene Sequence

>Msa0900710

ATGGGTTGTACCGACTCCAAAACCCTACCACCAATGGAAAAAACCATTCCTATAGCTTCTCCAAATTTCTCAACAAAACCAAAAACTCTTAGACAAGAAATTCTTATACAAATTCCAGGATGTAAAGTTTATCTAATGGATGAAGGAGAAGCACATGAACTTACACAAGGACAATTCATGATCATAAAAATAGTTGATGAAAATGTTTCATTAGCAACAATCATCAAAATAGGAAACAATGTTCAATTTCCTTTAACAAAAGATGAACCAGTTGTGAAGGTTGATAATCTTCATTACCTCTTTTCATTGCCAGTGAAAGATGGTCATGAGCCTCTAAGCTATGGTGTTACTTTTCCACATGAATTTTCTGGTAGCATGGCTTTGGTTGAATCTTTTCTTAAGGAACACTCTTGCTTTTCTGATTTGAAATTGAGTAAGAAGAAGAGTGATCTTGATTGGGAAGAGTTTGCTCCAAGTGTTGAAAATTATAATCATTTTCTTGCTAAGGCTATTGCTGAACATTTGTCCAAATCTTTACTCAATGGTGTTGGAATAGTGAGTGGATCATTGATGACTCCTGTCCTCAAATCTCAACCAGGACAGGCATTCCTTAAGATGCTCCCAGGAGAGGTTCTGTTGGCTTCCCTTGATGCAGTCAACAAGGTTTTTGATGCAGCAGAGGCAGCCGAAAAACAAACTCTATCCGCCACCTCCCAAGCTGCAACAAGAATGGTTTCTAACAGATTGCATTATGAATACATAGTAGACTCTGATTTATATAGCAGTGGTTACTATTCTATTTATAGATTCAAGAGAAACTTATTCTCTTCCATACAATTCCTACGGTATGGGGAAGAAGCAGGGGAAGCAACTGAGCATGTATTTGCAACTGCAGGACATGCTGCTAATACTGCTTGGAATGTCTCCAAGATTAGAAAAGCCATCAATCCAGCTTCTAGTGCAGCTACACTGAGAAATTCTGCCAAAAATGCAAGCAACTATTAG

Protein sequence

>Msa0900710

MGCTDSKTLPPMEKTIPIASPNFSTKPKTLRQEILIQIPGCKVYLMDEGEAHELTQGQFMIIKIVDENVSLATIIKIGNNVQFPLTKDEPVVKVDNLHYLFSLPVKDGHEPLSYGVTFPHEFSGSMALVESFLKEHSCFSDLKLSKKKSDLDWEEFAPSVENYNHFLAKAIAEHLSKSLLNGVGIVSGSLMTPVLKSQPGQAFLKMLPGEVLLASLDAVNKVFDAAEAAEKQTLSATSQAATRMVSNRLHYEYIVDSDLYSSGYYSIYRFKRNLFSSIQFLRYGEEAGEATEHVFATAGHAANTAWNVSKIRKAINPASSAATLRNSAKNASNY*