Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0900710 | GAU22802.1 | 74.118 | 340 | 42 | 7 | 1 | 334 | 1 | 300 | 1.13e-166 | 476 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0900710 | sp|F4JNX2|SDEH4_ARATH | 27.792 | 403 | 157 | 10 | 17 | 320 | 55 | 422 | 6.04e-35 | 135 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0900710 | A0A2Z6MB96 | 74.118 | 340 | 42 | 7 | 1 | 334 | 1 | 300 | 5.40e-167 | 476 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006110 | Msa0900710 | 0.809499 | 1.836059e-50 | -8.615850e-47 |
Msa0022550 | Msa0900710 | 0.816676 | 4.891744e-52 | -8.615850e-47 |
Msa0036140 | Msa0900710 | 0.804999 | 1.649663e-49 | -8.615850e-47 |
Msa0036920 | Msa0900710 | 0.803336 | 3.659950e-49 | -8.615850e-47 |
Msa0043560 | Msa0900710 | 0.809421 | 1.907690e-50 | -8.615850e-47 |
Msa0077450 | Msa0900710 | 0.802435 | 5.619061e-49 | -8.615850e-47 |
Msa0626280 | Msa0900710 | 0.821641 | 3.624660e-53 | -8.615850e-47 |
Msa0637900 | Msa0900710 | 0.800510 | 1.393201e-48 | -8.615850e-47 |
Msa0657750 | Msa0900710 | 0.818046 | 2.404617e-52 | -8.615850e-47 |
Msa0664570 | Msa0900710 | 0.800924 | 1.147048e-48 | -8.615850e-47 |
Msa0682550 | Msa0900710 | 0.804443 | 2.154780e-49 | -8.615850e-47 |
Msa0685750 | Msa0900710 | 0.805786 | 1.128191e-49 | -8.615850e-47 |
Msa0688070 | Msa0900710 | 0.809633 | 1.717850e-50 | -8.615850e-47 |
Msa0693380 | Msa0900710 | 0.803852 | 2.859913e-49 | -8.615850e-47 |
Msa0704920 | Msa0900710 | 0.800143 | 1.654628e-48 | -8.615850e-47 |
Msa0723990 | Msa0900710 | 0.809673 | 1.684724e-50 | -8.615850e-47 |
Msa0756530 | Msa0900710 | 0.800805 | 1.213098e-48 | -8.615850e-47 |
Msa0760130 | Msa0900710 | 0.810636 | 1.044762e-50 | -8.615850e-47 |
Msa0828920 | Msa0900710 | 0.815828 | 7.567893e-52 | -8.615850e-47 |
Msa0832090 | Msa0900710 | 0.812970 | 3.241912e-51 | -8.615850e-47 |
Msa0123300 | Msa0900710 | 0.802694 | 4.968966e-49 | -8.615850e-47 |
Msa0130970 | Msa0900710 | 0.800555 | 1.364452e-48 | -8.615850e-47 |
Msa0152400 | Msa0900710 | 0.800890 | 1.165679e-48 | -8.615850e-47 |
Msa0169860 | Msa0900710 | 0.806962 | 6.375212e-50 | -8.615850e-47 |
Msa0170140 | Msa0900710 | 0.814796 | 1.283540e-51 | -8.615850e-47 |
Msa0212990 | Msa0900710 | 0.808044 | 3.757382e-50 | -8.615850e-47 |
Msa0213040 | Msa0900710 | 0.814575 | 1.436814e-51 | -8.615850e-47 |
Msa0213520 | Msa0900710 | 0.819139 | 1.358941e-52 | -8.615850e-47 |
Msa0218810 | Msa0900710 | 0.801520 | 8.662746e-49 | -8.615850e-47 |
Msa0237310 | Msa0900710 | 0.821487 | 3.933287e-53 | -8.615850e-47 |
Msa0388960 | Msa0900710 | 0.825558 | 4.390038e-54 | -8.615850e-47 |
Msa0439970 | Msa0900710 | 0.811081 | 8.369495e-51 | -8.615850e-47 |
Msa0243250 | Msa0900710 | 0.800849 | 1.188158e-48 | -8.615850e-47 |
Msa0244960 | Msa0900710 | 0.812960 | 3.259469e-51 | -8.615850e-47 |
Msa0253340 | Msa0900710 | 0.804749 | 1.860744e-49 | -8.615850e-47 |
Msa0259500 | Msa0900710 | 0.809953 | 1.466107e-50 | -8.615850e-47 |
Msa0274730 | Msa0900710 | 0.821561 | 3.782239e-53 | -8.615850e-47 |
Msa0284520 | Msa0900710 | 0.804925 | 1.709182e-49 | -8.615850e-47 |
Msa0292170 | Msa0900710 | 0.807631 | 4.599997e-50 | -8.615850e-47 |
Msa0305700 | Msa0900710 | 0.800394 | 1.471428e-48 | -8.615850e-47 |
Msa0315530 | Msa0900710 | 0.817574 | 3.073552e-52 | -8.615850e-47 |
Msa0326520 | Msa0900710 | 0.802206 | 6.262333e-49 | -8.615850e-47 |
Msa0330340 | Msa0900710 | 0.812476 | 4.159925e-51 | -8.615850e-47 |
Msa0351380 | Msa0900710 | 0.808598 | 2.863379e-50 | -8.615850e-47 |
Msa0484780 | Msa0900710 | 0.824726 | 6.906440e-54 | -8.615850e-47 |
Msa0495320 | Msa0900710 | 0.813279 | 2.774020e-51 | -8.615850e-47 |
Msa0495330 | Msa0900710 | 0.817595 | 3.039765e-52 | -8.615850e-47 |
Msa0512900 | Msa0900710 | 0.809819 | 1.567016e-50 | -8.615850e-47 |
Msa0581050 | Msa0900710 | 0.800754 | 1.242445e-48 | -8.615850e-47 |
Msa0870530 | Msa0900710 | 0.803926 | 2.760592e-49 | -8.615850e-47 |
Msa0900710 | Msa0908050 | 0.800239 | 1.582352e-48 | -8.615850e-47 |
Msa0900710 | Msa0922410 | 0.803108 | 4.079571e-49 | -8.615850e-47 |
Msa0900710 | Msa0926370 | 0.830066 | 3.620034e-55 | -8.615850e-47 |
Msa0900710 | Msa0969450 | 0.819142 | 1.356271e-52 | -8.615850e-47 |
Msa0900710 | Msa0969520 | 0.824615 | 7.333592e-54 | -8.615850e-47 |
Msa0900710 | Msa1000290 | 0.806996 | 6.269541e-50 | -8.615850e-47 |
Msa0900710 | Msa1082500 | 0.806937 | 6.452982e-50 | -8.615850e-47 |
Msa0900710 | Msa1121490 | 0.830983 | 2.159113e-55 | -8.615850e-47 |
Msa0900710 | Msa1127770 | 0.807353 | 5.269837e-50 | -8.615850e-47 |
Msa0900710 | Msa1133220 | 0.803628 | 3.183855e-49 | -8.615850e-47 |
Msa0900710 | Msa1137570 | 0.806827 | 6.809665e-50 | -8.615850e-47 |
Msa0900710 | Msa1151910 | 0.821048 | 4.966462e-53 | -8.615850e-47 |
Msa0900710 | Msa1158310 | 0.815884 | 7.355220e-52 | -8.615850e-47 |
Msa0900710 | Msa1162550 | -0.801316 | 9.535896e-49 | -8.615850e-47 |
Msa0900710 | Msa1179940 | 0.823009 | 1.744153e-53 | -8.615850e-47 |
Msa0900710 | Msa1179970 | 0.829167 | 5.988946e-55 | -8.615850e-47 |
Msa0900710 | Msa1220150 | 0.802074 | 6.667330e-49 | -8.615850e-47 |
Msa0900710 | Msa1224480 | 0.810283 | 1.244693e-50 | -8.615850e-47 |
Msa0900710 | Msa1313150 | 0.821087 | 4.864854e-53 | -8.615850e-47 |
Msa0900710 | Msa1353470 | 0.812139 | 4.926463e-51 | -8.615850e-47 |
Msa0900710 | Msa1408620 | -0.801504 | 8.727240e-49 | -8.615850e-47 |
Msa0900710 | Msa1410210 | 0.828452 | 8.920312e-55 | -8.615850e-47 |
Msa0900710 | Msa1418260 | 0.822186 | 2.710853e-53 | -8.615850e-47 |
Msa0900710 | Msa1423880 | 0.816575 | 5.153911e-52 | -8.615850e-47 |
Msa0900710 | Msa1424680 | 0.802787 | 4.752581e-49 | -8.615850e-47 |
Msa0900710 | Msa1457430 | 0.819894 | 9.138636e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0900710 | MtrunA17_Chr6g0486861 | 84.804 | 204 | 28 | 2 | 1 | 204 | 1 | 201 | 5.93e-124 | 360 |
Msa0900710 | MtrunA17_Chr6g0486861 | 75.000 | 164 | 7 | 1 | 171 | 334 | 245 | 374 | 7.25e-73 | 230 |
Msa0900710 | MtrunA17_Chr8g0389881 | 59.500 | 200 | 73 | 6 | 1 | 196 | 1 | 196 | 4.17e-73 | 230 |
Msa0900710 | MtrunA17_Chr8g0389881 | 62.048 | 166 | 27 | 2 | 171 | 334 | 244 | 375 | 6.80e-57 | 189 |
Msa0900710 | MtrunA17_Chr6g0486881 | 82.090 | 134 | 21 | 2 | 17 | 147 | 9 | 142 | 1.74e-72 | 224 |
Msa0900710 | MtrunA17_Chr5g0405691 | 28.993 | 407 | 141 | 11 | 24 | 319 | 62 | 431 | 8.96e-35 | 132 |
Msa0900710 | MtrunA17_Chr4g0037211 | 26.980 | 404 | 183 | 9 | 8 | 333 | 33 | 402 | 1.20e-34 | 130 |
Msa0900710 | MtrunA17_Chr8g0361491 | 67.273 | 55 | 18 | 0 | 46 | 100 | 1 | 55 | 1.67e-20 | 84.0 |
Msa0900710 | MtrunA17_Chr8g0371621 | 25.472 | 318 | 108 | 8 | 27 | 218 | 71 | 385 | 4.06e-16 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0900710 | AT3G21600.3 | 49.689 | 161 | 74 | 3 | 18 | 172 | 20 | 179 | 1.77e-49 | 166 |
Msa0900710 | AT3G21600.2 | 49.689 | 161 | 74 | 3 | 18 | 172 | 20 | 179 | 2.45e-49 | 169 |
Msa0900710 | AT3G21600.2 | 54.483 | 145 | 31 | 2 | 167 | 311 | 244 | 353 | 8.54e-33 | 125 |
Msa0900710 | AT3G21600.1 | 49.689 | 161 | 74 | 3 | 18 | 172 | 20 | 179 | 2.75e-49 | 169 |
Msa0900710 | AT3G21600.1 | 54.545 | 154 | 35 | 2 | 167 | 320 | 244 | 362 | 5.65e-36 | 134 |
Msa0900710 | AT4G15450.2 | 33.053 | 357 | 169 | 12 | 29 | 329 | 32 | 374 | 1.76e-48 | 167 |
Msa0900710 | AT4G15450.1 | 31.405 | 363 | 173 | 12 | 29 | 329 | 32 | 380 | 2.63e-44 | 156 |
Msa0900710 | AT4G35985.1 | 27.792 | 403 | 157 | 10 | 17 | 320 | 55 | 422 | 6.14e-36 | 135 |
Msa0900710 | AT2G17840.1 | 27.273 | 418 | 155 | 12 | 11 | 319 | 54 | 431 | 1.62e-31 | 123 |
Msa0900710 | AT4G35985.3 | 28.097 | 331 | 138 | 9 | 17 | 248 | 55 | 384 | 6.67e-28 | 112 |
Msa0900710 | AT3G51250.1 | 27.078 | 373 | 188 | 11 | 27 | 317 | 70 | 440 | 1.58e-26 | 109 |
Msa0900710 | AT2G17840.2 | 26.801 | 347 | 139 | 11 | 11 | 248 | 54 | 394 | 4.31e-24 | 102 |
Msa0900710 | AT4G35985.2 | 29.952 | 207 | 103 | 6 | 17 | 183 | 55 | 259 | 5.08e-19 | 86.7 |
Msa0900710 | AT3G51250.2 | 27.830 | 212 | 97 | 5 | 27 | 183 | 70 | 280 | 5.52e-19 | 87.4 |
Msa0900710 | AT3G21590.3 | 51.282 | 78 | 38 | 0 | 171 | 248 | 141 | 218 | 5.04e-16 | 76.3 |
Find 61 sgRNAs with CRISPR-Local
Find 535 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCATTGGTGGTAGGGTTT+TGG | 0.236710 | 6_1:+96932401 | None:intergenic |
GAAAGATGGTTCAAAATCTT+AGG | 0.258588 | 6_1:-96923996 | Msa0900710:three_prime_UTR |
AACACCATTGAGTAAAGATT+TGG | 0.289285 | 6_1:+96930845 | None:intergenic |
TTAGCAACAATCATCAAAAT+AGG | 0.318911 | 6_1:-96932207 | Msa0900710:CDS |
TTTCTTGCTAAGGCTATTGC+TGG | 0.337164 | 6_1:-96931922 | Msa0900710:intron |
AACCATTCTTGTTGCAGCTT+GGG | 0.343724 | 6_1:+96929905 | None:intergenic |
AGAAGAAGAGTGATCTTGAT+TGG | 0.343736 | 6_1:-96931981 | Msa0900710:CDS |
GAGAAATTTGGAGAAGCTAT+AGG | 0.362475 | 6_1:+96932369 | None:intergenic |
CAACAAGAATGGTTTCTAAC+AGG | 0.380521 | 6_1:-96929896 | Msa0900710:intron |
AGGATGTAAAGTTTATCTAA+TGG | 0.383498 | 6_1:-96932301 | Msa0900710:CDS |
CCTCTCCTGGGAGCATCTTA+AGG | 0.391812 | 6_1:+96930763 | None:intergenic |
TATAGGTATGGGGAAGAAGC+AGG | 0.403987 | 6_1:-96924289 | Msa0900710:intron |
GAAATTCTTATACAAATTCC+AGG | 0.407082 | 6_1:-96932321 | Msa0900710:CDS |
TGCACTAGAAGCTGGATTGA+TGG | 0.416281 | 6_1:+96924189 | None:intergenic |
TTTGTATTTAACACAGATGA+AGG | 0.431932 | 6_1:-96924101 | Msa0900710:three_prime_UTR |
TTGTCCAAATCTTTACTCAA+TGG | 0.445995 | 6_1:-96930849 | Msa0900710:CDS |
AAAGTAACACCATAGCTTAG+AGG | 0.460022 | 6_1:+96932087 | None:intergenic |
AAACCATTCTTGTTGCAGCT+TGG | 0.465341 | 6_1:+96929904 | None:intergenic |
AGATTATCAACCTTCACAAC+TGG | 0.466828 | 6_1:+96932150 | None:intergenic |
AAAGATGGTTCAAAATCTTA+GGG | 0.469183 | 6_1:-96923995 | Msa0900710:three_prime_UTR |
AGTGTAGCTGCACTAGAAGC+TGG | 0.473361 | 6_1:+96924181 | None:intergenic |
GAAGCCAACAGAACCTCTCC+TGG | 0.484119 | 6_1:+96930750 | None:intergenic |
ATAGGTATGGGGAAGAAGCA+GGG | 0.484548 | 6_1:-96924288 | Msa0900710:intron |
CCTCAAATCTCAACCAGGAC+AGG | 0.485657 | 6_1:-96930790 | Msa0900710:CDS |
CATTCTTGTTGCAGCTTGGG+AGG | 0.487768 | 6_1:+96929908 | None:intergenic |
GAAGAAGAGTGATCTTGATT+GGG | 0.488678 | 6_1:-96931980 | Msa0900710:CDS |
ATTAGATAAACTTTACATCC+TGG | 0.490753 | 6_1:+96932303 | None:intergenic |
CCTGGTTGAGATTTGAGGAC+AGG | 0.496940 | 6_1:+96930795 | None:intergenic |
TGTTGCAGCTTGGGAGGTGG+CGG | 0.497700 | 6_1:+96929914 | None:intergenic |
AAATCTTTACTCAATGGTGT+TGG | 0.499913 | 6_1:-96930843 | Msa0900710:CDS |
ATCTTAAGGAATGCCTGTCC+TGG | 0.501346 | 6_1:+96930777 | None:intergenic |
TCTTGTTGCAGCTTGGGAGG+TGG | 0.504003 | 6_1:+96929911 | None:intergenic |
CTCCAAAACCCTACCACCAA+TGG | 0.507062 | 6_1:-96932403 | Msa0900710:CDS |
CTCCCAAGCTGCAACAAGAA+TGG | 0.507194 | 6_1:-96929907 | Msa0900710:CDS |
TAGGTATGGGGAAGAAGCAG+GGG | 0.514222 | 6_1:-96924287 | Msa0900710:CDS |
AATCAACTTGATGAGAAAGA+TGG | 0.516985 | 6_1:-96924010 | Msa0900710:three_prime_UTR |
GACATGCTGCTAATACTGCT+TGG | 0.519819 | 6_1:-96924234 | Msa0900710:CDS |
TTTACTTACTGACTGCATCA+AGG | 0.520023 | 6_1:+96930727 | None:intergenic |
GCTCCCAGGAGAGGTTCTGT+TGG | 0.526761 | 6_1:-96930754 | Msa0900710:CDS |
GGCTCATGACCATCTTTCAC+TGG | 0.543710 | 6_1:+96932108 | None:intergenic |
CCTGTCCTGGTTGAGATTTG+AGG | 0.544020 | 6_1:+96930790 | None:intergenic |
TCTCTTCCATACAATTCCTA+CGG | 0.544523 | 6_1:-96929548 | Msa0900710:intron |
AAAATCTTAGGGAGCAATGT+TGG | 0.545791 | 6_1:-96923984 | Msa0900710:three_prime_UTR |
AAAGTTTATCTAATGGATGA+AGG | 0.547066 | 6_1:-96932294 | Msa0900710:CDS |
CTTTCACTGGCAATGAAAAG+AGG | 0.549035 | 6_1:+96932121 | None:intergenic |
ATTTGGAGAAGCTATAGGAA+TGG | 0.551970 | 6_1:+96932374 | None:intergenic |
TTACTTACTGACTGCATCAA+GGG | 0.565912 | 6_1:+96930728 | None:intergenic |
AAATACTTGTATAATTCTGA+AGG | 0.573146 | 6_1:+96924065 | None:intergenic |
GACTCTGATTTATATAGCAG+TGG | 0.575266 | 6_1:-96929606 | Msa0900710:CDS |
GGTCATGAGCCTCTAAGCTA+TGG | 0.578398 | 6_1:-96932096 | Msa0900710:CDS |
CCTTAAGATGCTCCCAGGAG+AGG | 0.579842 | 6_1:-96930763 | Msa0900710:CDS |
ATTTAACACAGATGAAGGCA+TGG | 0.583201 | 6_1:-96924096 | Msa0900710:three_prime_UTR |
AAAAGATGAACCAGTTGTGA+AGG | 0.590079 | 6_1:-96932160 | Msa0900710:CDS |
GCATTCCTTAAGATGCTCCC+AGG | 0.593115 | 6_1:-96930768 | Msa0900710:CDS |
CCTGTCCTCAAATCTCAACC+AGG | 0.610346 | 6_1:-96930795 | Msa0900710:CDS |
AAGCCAACAGAACCTCTCCT+GGG | 0.615497 | 6_1:+96930751 | None:intergenic |
GAGCATGTATTTGCAACTGC+AGG | 0.617638 | 6_1:-96924256 | Msa0900710:CDS |
GTCTTGGTTATATAGGTATG+GGG | 0.638426 | 6_1:-96924299 | Msa0900710:intron |
ATGCTACCAGAAAATTCATG+TGG | 0.664358 | 6_1:+96932063 | None:intergenic |
AATGGTGTTGGAATAGTGAG+TGG | 0.664953 | 6_1:-96930831 | Msa0900710:CDS |
GAAGCACATGAACTTACACA+AGG | 0.731250 | 6_1:-96932270 | Msa0900710:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTAAAAAAATGAAC+AGG | + | chr6_1:96925808-96925827 | None:intergenic | 10.0% |
!! | TAAAAATATAAGATAGATAT+TGG | + | chr6_1:96926248-96926267 | None:intergenic | 10.0% |
!!! | TATTATTTATAAGTTTGTTA+AGG | - | chr6_1:96931420-96931439 | Msa0900710:intron | 10.0% |
!!! | ATTACTTTTCAAACAAAAAT+AGG | + | chr6_1:96924935-96924954 | None:intergenic | 15.0% |
!!! | TTTAACAATGTCAATTATTT+TGG | + | chr6_1:96926098-96926117 | None:intergenic | 15.0% |
!!! | TTGCTATTTTATGAAATTAA+AGG | - | chr6_1:96926132-96926151 | Msa0900710:intron | 15.0% |
!!! | TATCTTATATTTTTAACAAG+TGG | - | chr6_1:96926253-96926272 | Msa0900710:intron | 15.0% |
!!! | AAAAATTAAAATTTTCTAGG+TGG | + | chr6_1:96926421-96926440 | None:intergenic | 15.0% |
!!! | TATTTAACCTTTTTTAATGA+GGG | + | chr6_1:96931642-96931661 | None:intergenic | 15.0% |
!!! | ATATTTAACCTTTTTTAATG+AGG | + | chr6_1:96931643-96931662 | None:intergenic | 15.0% |
!!! | TTTTACTTTGACAATTTTTT+TGG | - | chr6_1:96931838-96931857 | Msa0900710:intron | 15.0% |
!!! | TTTTGAAAATGAATTTTACA+CGG | - | chr6_1:96932415-96932434 | Msa0900710:CDS | 15.0% |
!!! | TGATTATAATTTTCAACACT+TGG | + | chr6_1:96924333-96924352 | None:intergenic | 20.0% |
!!! | TTATAATCATTTTCTTGCTA+AGG | - | chr6_1:96924344-96924363 | Msa0900710:intron | 20.0% |
!! | TTAGAACTTTATATGAAAAC+AGG | + | chr6_1:96924530-96924549 | None:intergenic | 20.0% |
!!! | GTTGTTTTCATTAGATATTT+TGG | - | chr6_1:96924550-96924569 | Msa0900710:intron | 20.0% |
!! | TAGTATTTCCTTAAAACTTA+TGG | + | chr6_1:96924604-96924623 | None:intergenic | 20.0% |
!!! | AAAACAAGAAAGTTTTAAGT+TGG | + | chr6_1:96924688-96924707 | None:intergenic | 20.0% |
!!! | AACTTAAAACTTTCTTGTTT+TGG | - | chr6_1:96924687-96924706 | Msa0900710:intron | 20.0% |
!! | GCTATTTGGTATAAAATTTA+GGG | + | chr6_1:96924746-96924765 | None:intergenic | 20.0% |
!!! | TTAAAAGTTGTTTTGAAATC+AGG | - | chr6_1:96924975-96924994 | Msa0900710:intron | 20.0% |
!!! | ATACTTAATAACCTTTTAAC+CGG | + | chr6_1:96925307-96925326 | None:intergenic | 20.0% |
!! | GTTATGTAAACACTAAATTT+AGG | + | chr6_1:96925658-96925677 | None:intergenic | 20.0% |
!! | ACACTTATTTATTAGTTATC+CGG | - | chr6_1:96925847-96925866 | Msa0900710:intron | 20.0% |
!! | TTACAATTTCAACTACTTAA+AGG | - | chr6_1:96926172-96926191 | Msa0900710:intron | 20.0% |
!!! | ATAATTTTACCCTTAATGTT+TGG | - | chr6_1:96926465-96926484 | Msa0900710:intron | 20.0% |
!!! | AAAGGCTTTTACTAAATAAA+TGG | + | chr6_1:96926768-96926787 | None:intergenic | 20.0% |
!!! | TATTTAGTAAAAGCCTTTTA+TGG | - | chr6_1:96926770-96926789 | Msa0900710:intron | 20.0% |
!! | AGAATCCTGATATATATAAA+AGG | + | chr6_1:96927372-96927391 | None:intergenic | 20.0% |
!! | GAGGATAATTTATAATTGAT+AGG | - | chr6_1:96927570-96927589 | Msa0900710:intron | 20.0% |
!! | AATTTATAATTGATAGGAAG+TGG | - | chr6_1:96927576-96927595 | Msa0900710:intron | 20.0% |
!! | ATTTATAATTGATAGGAAGT+GGG | - | chr6_1:96927577-96927596 | Msa0900710:intron | 20.0% |
!! | ATAGAAAAGATAGGAATATT+TGG | + | chr6_1:96927674-96927693 | None:intergenic | 20.0% |
!! | TCTAGAAAATGTATATTCTT+GGG | + | chr6_1:96928746-96928765 | None:intergenic | 20.0% |
!!! | AATATACATTTTCTAGACTT+TGG | - | chr6_1:96928749-96928768 | Msa0900710:intron | 20.0% |
!! | AATAATATATACATGCTTGT+GGG | + | chr6_1:96929568-96929587 | None:intergenic | 20.0% |
!! | AAATAATATATACATGCTTG+TGG | + | chr6_1:96929569-96929588 | None:intergenic | 20.0% |
!! | AGAAGAATTTATTGTCTATT+GGG | + | chr6_1:96929687-96929706 | None:intergenic | 20.0% |
!! | AAGAAGAATTTATTGTCTAT+TGG | + | chr6_1:96929688-96929707 | None:intergenic | 20.0% |
!!! | TATGTGATTTGTTATTGATA+TGG | - | chr6_1:96930419-96930438 | Msa0900710:intron | 20.0% |
!!! | ACACAAGAATTTTCTTAAAA+AGG | + | chr6_1:96930473-96930492 | None:intergenic | 20.0% |
!! | TTAAGATTGAGAAGTTTAAT+GGG | + | chr6_1:96930737-96930756 | None:intergenic | 20.0% |
!!! | TTTAAGATTGAGAAGTTTAA+TGG | + | chr6_1:96930738-96930757 | None:intergenic | 20.0% |
!!! | AAAGGCTTTTACTAAATAAA+TGG | + | chr6_1:96926768-96926787 | None:intergenic | 20.0% |
!!! | TATTTAGTAAAAGCCTTTTA+TGG | - | chr6_1:96926770-96926789 | Msa0900710:intron | 20.0% |
!!! | GAGTTGTTTGATAATTATTT+TGG | - | chr6_1:96931324-96931343 | Msa0900710:intron | 20.0% |
!!! | AAGTTTGTTAAGGTATTTTA+TGG | - | chr6_1:96931430-96931449 | Msa0900710:intron | 20.0% |
!!! | TTTTTTACCCTCATTAAAAA+AGG | - | chr6_1:96931632-96931651 | Msa0900710:intron | 20.0% |
!! | TAGTTGAGAAAAAATTAATG+TGG | + | chr6_1:96931881-96931900 | None:intergenic | 20.0% |
!! | AAATACTTGTATAATTCTGA+AGG | + | chr6_1:96932214-96932233 | None:intergenic | 20.0% |
!!! | ATTATACAAGTATTTTGTGT+TGG | - | chr6_1:96932219-96932238 | Msa0900710:CDS | 20.0% |
!!! | ATTTTTCTTAAGTCATCTTA+TGG | + | chr6_1:96932249-96932268 | None:intergenic | 20.0% |
!!! | TTTGGTTTTGTTGAGAAATT+TGG | + | chr6_1:96923922-96923941 | None:intergenic | 25.0% |
!! | ATTTCTTGTCTAAGAGTTTT+TGG | + | chr6_1:96923940-96923959 | None:intergenic | 25.0% |
! | GAAATTCTTATACAAATTCC+AGG | - | chr6_1:96923955-96923974 | Msa0900710:three_prime_UTR | 25.0% |
! | ATTAGATAAACTTTACATCC+TGG | + | chr6_1:96923976-96923995 | None:intergenic | 25.0% |
! | AGGATGTAAAGTTTATCTAA+TGG | - | chr6_1:96923975-96923994 | Msa0900710:three_prime_UTR | 25.0% |
!! | AAAGTTTATCTAATGGATGA+AGG | - | chr6_1:96923982-96924001 | Msa0900710:three_prime_UTR | 25.0% |
! | TTAGCAACAATCATCAAAAT+AGG | - | chr6_1:96924069-96924088 | Msa0900710:three_prime_UTR | 25.0% |
!! | TTTGGTTGAATCTTTTCTTA+AGG | - | chr6_1:96924239-96924258 | Msa0900710:CDS | 25.0% |
!! | GAAAATTGCCATAAGTTTTA+AGG | - | chr6_1:96924593-96924612 | Msa0900710:intron | 25.0% |
! | CAAATATAGTAGTATTGTGT+TGG | - | chr6_1:96924655-96924674 | Msa0900710:intron | 25.0% |
! | GGCTATTTGGTATAAAATTT+AGG | + | chr6_1:96924747-96924766 | None:intergenic | 25.0% |
!! | ATTTAGCTCAATCTAAAAGT+TGG | + | chr6_1:96924768-96924787 | None:intergenic | 25.0% |
!!! | TTTTGAAATCAGGTTCAAAA+AGG | - | chr6_1:96924985-96925004 | Msa0900710:intron | 25.0% |
! | AAAATTAATCTCCGGTTAAA+AGG | - | chr6_1:96925293-96925312 | Msa0900710:intron | 25.0% |
! | AACTTATTGAACCATGATTT+GGG | - | chr6_1:96925884-96925903 | Msa0900710:intron | 25.0% |
!!! | GTAATGCTTTAAAATCAAAC+AGG | + | chr6_1:96925924-96925943 | None:intergenic | 25.0% |
! | GTAGTTGAAATTGTAAAACT+CGG | + | chr6_1:96926168-96926187 | None:intergenic | 25.0% |
!!! | TAATTTTGACCATCTTATGA+TGG | + | chr6_1:96926208-96926227 | None:intergenic | 25.0% |
!!! | AGTTTGCTACAATTAATTGA+GGG | + | chr6_1:96926539-96926558 | None:intergenic | 25.0% |
!!! | TAGTTTGCTACAATTAATTG+AGG | + | chr6_1:96926540-96926559 | None:intergenic | 25.0% |
!! | TCACATTTAAGTTATGGAAA+TGG | + | chr6_1:96926802-96926821 | None:intergenic | 25.0% |
!! | GTAAAGTCACATTTAAGTTA+TGG | + | chr6_1:96926808-96926827 | None:intergenic | 25.0% |
! | TCAATGTTGACAAATTTACA+TGG | + | chr6_1:96926897-96926916 | None:intergenic | 25.0% |
! | TATTTGGATACAAAGACTAA+TGG | + | chr6_1:96927127-96927146 | None:intergenic | 25.0% |
! | TTCATTATGTTTCATAGGAT+TGG | + | chr6_1:96927337-96927356 | None:intergenic | 25.0% |
! | GATGTTTCATTATGTTTCAT+AGG | + | chr6_1:96927342-96927361 | None:intergenic | 25.0% |
! | GAAACATAATGAAACATCTA+AGG | - | chr6_1:96927344-96927363 | Msa0900710:intron | 25.0% |
!! | AGGTTCCTTTTATATATATC+AGG | - | chr6_1:96927364-96927383 | Msa0900710:intron | 25.0% |
! | TTTATAATTGATAGGAAGTG+GGG | - | chr6_1:96927578-96927597 | Msa0900710:intron | 25.0% |
!! | TATTCCTATCTTTTCTATCT+CGG | - | chr6_1:96927676-96927695 | Msa0900710:intron | 25.0% |
!!! | TATCATTTTGTTGTTGTATG+TGG | + | chr6_1:96927823-96927842 | None:intergenic | 25.0% |
! | CTTACATAGAAACAAAACTT+GGG | + | chr6_1:96928321-96928340 | None:intergenic | 25.0% |
!! | ATTGTCTTTTAACAGAAGAA+GGG | + | chr6_1:96928424-96928443 | None:intergenic | 25.0% |
!! | TATTGTCTTTTAACAGAAGA+AGG | + | chr6_1:96928425-96928444 | None:intergenic | 25.0% |
! | GTCTAGAAAATGTATATTCT+TGG | + | chr6_1:96928747-96928766 | None:intergenic | 25.0% |
! | AAATGTGTTTACAGTATTCA+AGG | + | chr6_1:96929188-96929207 | None:intergenic | 25.0% |
!! | ACATTTGATTTCTTCTTGAT+TGG | - | chr6_1:96929202-96929221 | Msa0900710:intron | 25.0% |
!! | CATTTGATTTCTTCTTGATT+GGG | - | chr6_1:96929203-96929222 | Msa0900710:intron | 25.0% |
! | ATAATATATACATGCTTGTG+GGG | + | chr6_1:96929567-96929586 | None:intergenic | 25.0% |
! | GGAAACTTAAAAGTAGTAAA+GGG | + | chr6_1:96929625-96929644 | None:intergenic | 25.0% |
! | TGGAAACTTAAAAGTAGTAA+AGG | + | chr6_1:96929626-96929645 | None:intergenic | 25.0% |
! | GATTGGTACTATCAAAATAA+AGG | + | chr6_1:96929764-96929783 | None:intergenic | 25.0% |
! | TTGATATGGATTCATTCATT+CGG | - | chr6_1:96930433-96930452 | Msa0900710:intron | 25.0% |
!! | CAAGAATTTTCTTAAAAAGG+AGG | + | chr6_1:96930470-96930489 | None:intergenic | 25.0% |
!! | AATCTTAAATTTTGTTGCCA+TGG | - | chr6_1:96930749-96930768 | Msa0900710:CDS | 25.0% |
! | TACGTATACTATACTATTCA+CGG | + | chr6_1:96930800-96930819 | None:intergenic | 25.0% |
!! | ACTAGATTTGTTCAAGTATA+CGG | + | chr6_1:96930842-96930861 | None:intergenic | 25.0% |
!! | TCACATTTAAGTTATGGAAA+TGG | + | chr6_1:96926802-96926821 | None:intergenic | 25.0% |
!! | GTAAAGTCACATTTAAGTTA+TGG | + | chr6_1:96926808-96926827 | None:intergenic | 25.0% |
! | TTTGTATTTAACACAGATGA+AGG | - | chr6_1:96932175-96932194 | Msa0900710:CDS | 25.0% |
! | AAAGATGGTTCAAAATCTTA+GGG | - | chr6_1:96932281-96932300 | Msa0900710:CDS | 25.0% |
!!! | ATAGGAATGGTTTTTTCCAT+TGG | + | chr6_1:96923892-96923911 | None:intergenic | 30.0% |
!! | ACTGGTTCATCTTTTGTTAA+AGG | + | chr6_1:96924111-96924130 | None:intergenic | 30.0% |
! | ACTTTTCCACATGAATTTTC+TGG | - | chr6_1:96924207-96924226 | Msa0900710:CDS | 30.0% |
ACTATATTTGCTTCCTTAAC+CGG | + | chr6_1:96924645-96924664 | None:intergenic | 30.0% | |
! | TATGCTAACCAATGTTTTAC+CGG | + | chr6_1:96924722-96924741 | None:intergenic | 30.0% |
CAATCTAAAAGTTGGCTATT+TGG | + | chr6_1:96924760-96924779 | None:intergenic | 30.0% | |
TCTTATCTGAAGGACTATTT+AGG | + | chr6_1:96925023-96925042 | None:intergenic | 30.0% | |
AGTCCTTCAGATAAGATAAA+TGG | - | chr6_1:96925027-96925046 | Msa0900710:intron | 30.0% | |
ATTCATTCTGTTGTTCTTTG+TGG | + | chr6_1:96925103-96925122 | None:intergenic | 30.0% | |
GAATGAATGAAAACCTCATA+CGG | - | chr6_1:96925115-96925134 | Msa0900710:intron | 30.0% | |
!! | GTATTTTTGAATACCGTATG+AGG | + | chr6_1:96925131-96925150 | None:intergenic | 30.0% |
! | ATTGAGAGTGTAAAATAGTC+AGG | + | chr6_1:96925153-96925172 | None:intergenic | 30.0% |
AGGTAGATATGATTAAAGTC+AGG | + | chr6_1:96925205-96925224 | None:intergenic | 30.0% | |
TTGTCCAAATCTTTACTCAA+TGG | - | chr6_1:96925427-96925446 | Msa0900710:intron | 30.0% | |
AACACCATTGAGTAAAGATT+TGG | + | chr6_1:96925434-96925453 | None:intergenic | 30.0% | |
AAATCTTTACTCAATGGTGT+TGG | - | chr6_1:96925433-96925452 | Msa0900710:intron | 30.0% | |
AGATCTTCAACTTTGGTTAT+AGG | + | chr6_1:96925583-96925602 | None:intergenic | 30.0% | |
CTATGTAAGATCTTCAACTT+TGG | + | chr6_1:96925590-96925609 | None:intergenic | 30.0% | |
! | TGGTTCAATAAGTTGAATCA+TGG | + | chr6_1:96925878-96925897 | None:intergenic | 30.0% |
CAACTTATTGAACCATGATT+TGG | - | chr6_1:96925883-96925902 | Msa0900710:intron | 30.0% | |
!! | GCATAAAACCTTTAAAGTTG+TGG | - | chr6_1:96926053-96926072 | Msa0900710:intron | 30.0% |
ATTTAGCACCACAACTTTAA+AGG | + | chr6_1:96926064-96926083 | None:intergenic | 30.0% | |
CAATTTCAACTACTTAAAGG+TGG | - | chr6_1:96926175-96926194 | Msa0900710:intron | 30.0% | |
! | ATCTTTTAATGTCACAGACA+AGG | - | chr6_1:96926300-96926319 | Msa0900710:intron | 30.0% |
ACATGTAAGCCAAACATTAA+GGG | + | chr6_1:96926477-96926496 | None:intergenic | 30.0% | |
TACATGTAAGCCAAACATTA+AGG | + | chr6_1:96926478-96926497 | None:intergenic | 30.0% | |
AATTGTAGCAAACTAACTGT+TGG | - | chr6_1:96926545-96926564 | Msa0900710:intron | 30.0% | |
ATTGTAGCAAACTAACTGTT+GGG | - | chr6_1:96926546-96926565 | Msa0900710:intron | 30.0% | |
! | TTTTTACCGTAGGAATTGTA+TGG | + | chr6_1:96926737-96926756 | None:intergenic | 30.0% |
! | GGCTTTTACTAAATAAATGG+TGG | + | chr6_1:96926765-96926784 | None:intergenic | 30.0% |
TCACAAAAGTGACTTTAAGT+GGG | + | chr6_1:96926844-96926863 | None:intergenic | 30.0% | |
TTCACAAAAGTGACTTTAAG+TGG | + | chr6_1:96926845-96926864 | None:intergenic | 30.0% | |
AACATCTGCTAAATTGTGTT+TGG | - | chr6_1:96926930-96926949 | Msa0900710:intron | 30.0% | |
TACTACAGAAGCTGAATATA+TGG | + | chr6_1:96927175-96927194 | None:intergenic | 30.0% | |
GATAAAAGAAGATCTACTAC+TGG | + | chr6_1:96927267-96927286 | None:intergenic | 30.0% | |
!!! | TATGTTGATTCAGATTTTGC+AGG | + | chr6_1:96927297-96927316 | None:intergenic | 30.0% |
GGATTGGAATTTATTGTCAA+AGG | + | chr6_1:96927321-96927340 | None:intergenic | 30.0% | |
TACATATCATGGCATACATA+AGG | - | chr6_1:96927475-96927494 | Msa0900710:intron | 30.0% | |
AGATCAAGTCCAAGAATTAA+AGG | + | chr6_1:96927772-96927791 | None:intergenic | 30.0% | |
ACCTATTGTAGTATGTACAA+TGG | - | chr6_1:96927859-96927878 | Msa0900710:intron | 30.0% | |
ACCATTGTACATACTACAAT+AGG | + | chr6_1:96927863-96927882 | None:intergenic | 30.0% | |
AATTAAGTCTGTTGTATCCA+AGG | - | chr6_1:96927886-96927905 | Msa0900710:intron | 30.0% | |
! | TTTTAGACCGTACATAGATT+TGG | - | chr6_1:96927956-96927975 | Msa0900710:intron | 30.0% |
!! | GTAAAAACTGCTTTTCTCAA+TGG | + | chr6_1:96928062-96928081 | None:intergenic | 30.0% |
CCTTACATAGAAACAAAACT+TGG | + | chr6_1:96928322-96928341 | None:intergenic | 30.0% | |
!!! | CCAAGTTTTGTTTCTATGTA+AGG | - | chr6_1:96928319-96928338 | Msa0900710:intron | 30.0% |
! | TTGTCTTTTAACAGAAGAAG+GGG | + | chr6_1:96928423-96928442 | None:intergenic | 30.0% |
!! | ATCTAGCTTTGTTCTTTCTT+GGG | - | chr6_1:96928772-96928791 | Msa0900710:intron | 30.0% |
TATTCTTCCTTACATGTGTT+CGG | + | chr6_1:96928824-96928843 | None:intergenic | 30.0% | |
ACATGTAAGGAAGAATAATC+AGG | - | chr6_1:96928827-96928846 | Msa0900710:intron | 30.0% | |
!! | AATTGGTTTGAAAACACCAA+TGG | + | chr6_1:96928873-96928892 | None:intergenic | 30.0% |
CTAACATTCTGCAAATATGA+GGG | + | chr6_1:96929076-96929095 | None:intergenic | 30.0% | |
TCTAACATTCTGCAAATATG+AGG | + | chr6_1:96929077-96929096 | None:intergenic | 30.0% | |
TAATATATACATGCTTGTGG+GGG | + | chr6_1:96929566-96929585 | None:intergenic | 30.0% | |
TTTATTGTCTATTGGGCAAT+TGG | + | chr6_1:96929680-96929699 | None:intergenic | 30.0% | |
TACTATTCGCAAAATACAAG+GGG | + | chr6_1:96929731-96929750 | None:intergenic | 30.0% | |
GTACTATTCGCAAAATACAA+GGG | + | chr6_1:96929732-96929751 | None:intergenic | 30.0% | |
! | ATCAAAATAAAGGCACATGA+TGG | + | chr6_1:96929754-96929773 | None:intergenic | 30.0% |
AATTTCAAATGCTACAGTTG+TGG | + | chr6_1:96930078-96930097 | None:intergenic | 30.0% | |
!! | ATGAGTTGATCATATGAATC+AGG | - | chr6_1:96930306-96930325 | Msa0900710:intron | 30.0% |
TGCTCTTATTAAATTGTACG+AGG | + | chr6_1:96930508-96930527 | None:intergenic | 30.0% | |
GTGGAAATTAAAGATAAGGT+CGG | + | chr6_1:96930700-96930719 | None:intergenic | 30.0% | |
CACTGTGGAAATTAAAGATA+AGG | + | chr6_1:96930704-96930723 | None:intergenic | 30.0% | |
! | TTTTTACCGTAGGAATTGTA+TGG | + | chr6_1:96926737-96926756 | None:intergenic | 30.0% |
! | GGCTTTTACTAAATAAATGG+TGG | + | chr6_1:96926765-96926784 | None:intergenic | 30.0% |
CACTATAAGTTGTGGTTAAA+AGG | + | chr6_1:96931270-96931289 | None:intergenic | 30.0% | |
! | CTTTTAACCACAACTTATAG+TGG | - | chr6_1:96931268-96931287 | Msa0900710:intron | 30.0% |
AAGTTATCCACTATAAGTTG+TGG | + | chr6_1:96931278-96931297 | None:intergenic | 30.0% | |
!!! | CTATTTTGATTAAGCTGGAT+GGG | + | chr6_1:96931305-96931324 | None:intergenic | 30.0% |
!!! | TCTATTTTGATTAAGCTGGA+TGG | + | chr6_1:96931306-96931325 | None:intergenic | 30.0% |
!!! | CAACTCTATTTTGATTAAGC+TGG | + | chr6_1:96931310-96931329 | None:intergenic | 30.0% |
!!! | TTGATAATTATTTTGGCGCA+CGG | - | chr6_1:96931331-96931350 | Msa0900710:intron | 30.0% |
CTAAACTAAGCTAATCGAAA+CGG | + | chr6_1:96931358-96931377 | None:intergenic | 30.0% | |
!! | CAGGTTGAATTTTAAGTGTT+TGG | + | chr6_1:96931730-96931749 | None:intergenic | 30.0% |
CTGATAATTGATAAACTAGC+AGG | + | chr6_1:96931749-96931768 | None:intergenic | 30.0% | |
AGTGTATGTCTTGGTTATAT+AGG | - | chr6_1:96931970-96931989 | Msa0900710:CDS | 30.0% | |
ATGTCTTGGTTATATAGGTA+TGG | - | chr6_1:96931975-96931994 | Msa0900710:CDS | 30.0% | |
TGTCTTGGTTATATAGGTAT+GGG | - | chr6_1:96931976-96931995 | Msa0900710:CDS | 30.0% | |
!! | ATTGATGGCTTTTCTAATCT+TGG | + | chr6_1:96932075-96932094 | None:intergenic | 30.0% |
! | CTAATAGTTGCTTGCATTTT+TGG | + | chr6_1:96932132-96932151 | None:intergenic | 30.0% |
AATCAACTTGATGAGAAAGA+TGG | - | chr6_1:96932266-96932285 | Msa0900710:CDS | 30.0% | |
GAAAGATGGTTCAAAATCTT+AGG | - | chr6_1:96932280-96932299 | Msa0900710:CDS | 30.0% | |
ATTTGGAGAAGCTATAGGAA+TGG | + | chr6_1:96923905-96923924 | None:intergenic | 35.0% | |
GAGAAATTTGGAGAAGCTAT+AGG | + | chr6_1:96923910-96923929 | None:intergenic | 35.0% | |
AAAAGATGAACCAGTTGTGA+AGG | - | chr6_1:96924116-96924135 | Msa0900710:three_prime_UTR | 35.0% | |
AGATTATCAACCTTCACAAC+TGG | + | chr6_1:96924129-96924148 | None:intergenic | 35.0% | |
! | TTTTCATTGCCAGTGAAAGA+TGG | - | chr6_1:96924159-96924178 | Msa0900710:CDS | 35.0% |
AAAGTAACACCATAGCTTAG+AGG | + | chr6_1:96924192-96924211 | None:intergenic | 35.0% | |
ATGCTACCAGAAAATTCATG+TGG | + | chr6_1:96924216-96924235 | None:intergenic | 35.0% | |
!! | ACATGAATTTTCTGGTAGCA+TGG | - | chr6_1:96924215-96924234 | Msa0900710:CDS | 35.0% |
AGAAGAAGAGTGATCTTGAT+TGG | - | chr6_1:96924295-96924314 | Msa0900710:intron | 35.0% | |
GAAGAAGAGTGATCTTGATT+GGG | - | chr6_1:96924296-96924315 | Msa0900710:intron | 35.0% | |
TAGTAATGCTTACACCAATC+AGG | - | chr6_1:96924413-96924432 | Msa0900710:intron | 35.0% | |
GTTGTATATCCAAACCTGAT+TGG | + | chr6_1:96924430-96924449 | None:intergenic | 35.0% | |
TTCTTTAGCCGGTAAAACAT+TGG | - | chr6_1:96924711-96924730 | Msa0900710:intron | 35.0% | |
AAAAGTCATGCAGTTTCATG+CGG | + | chr6_1:96924908-96924927 | None:intergenic | 35.0% | |
TGAAATCAGGTTCAAAAAGG+AGG | - | chr6_1:96924988-96925007 | Msa0900710:intron | 35.0% | |
CCACCATTTATCTTATCTGA+AGG | + | chr6_1:96925033-96925052 | None:intergenic | 35.0% | |
CCTTCAGATAAGATAAATGG+TGG | - | chr6_1:96925030-96925049 | Msa0900710:intron | 35.0% | |
GATAAGATAAATGGTGGCAA+TGG | - | chr6_1:96925036-96925055 | Msa0900710:intron | 35.0% | |
! | TACGAACGATGGTTTGTAAT+TGG | - | chr6_1:96925234-96925253 | Msa0900710:intron | 35.0% |
! | TGGTTTGTAATTGGTTGACA+CGG | - | chr6_1:96925243-96925262 | Msa0900710:intron | 35.0% |
AGCGCATCAAAATTAATCTC+CGG | - | chr6_1:96925285-96925304 | Msa0900710:intron | 35.0% | |
GAAGTCATGAATTACTACGA+CGG | - | chr6_1:96925333-96925352 | Msa0900710:intron | 35.0% | |
! | TTACTTACTGACTGCATCAA+GGG | + | chr6_1:96925551-96925570 | None:intergenic | 35.0% |
! | TTTACTTACTGACTGCATCA+AGG | + | chr6_1:96925552-96925571 | None:intergenic | 35.0% |
! | AATGAACAGGTTGAATCAAC+CGG | + | chr6_1:96925795-96925814 | None:intergenic | 35.0% |
AAGTTGAATCATGGTTGAAC+CGG | + | chr6_1:96925869-96925888 | None:intergenic | 35.0% | |
! | TTGAACCATGATTTGGGATT+CGG | - | chr6_1:96925890-96925909 | Msa0900710:intron | 35.0% |
GGATTTACTCCATCATAAGA+TGG | - | chr6_1:96926196-96926215 | Msa0900710:intron | 35.0% | |
CAACAAGAATGGTTTCTAAC+AGG | - | chr6_1:96926380-96926399 | Msa0900710:intron | 35.0% | |
! | AATTTTCTAGGTGGATGTAC+TGG | + | chr6_1:96926412-96926431 | None:intergenic | 35.0% |
GACTCTGATTTATATAGCAG+TGG | - | chr6_1:96926670-96926689 | Msa0900710:intron | 35.0% | |
TCTCTTCCATACAATTCCTA+CGG | - | chr6_1:96926728-96926747 | Msa0900710:intron | 35.0% | |
GAAATGGTCAACACCATAAA+AGG | + | chr6_1:96926786-96926805 | None:intergenic | 35.0% | |
! | ATACCATTTTGTTCGAGAAG+TGG | + | chr6_1:96926992-96927011 | None:intergenic | 35.0% |
TTTGTTCTCGAATGAAAGAC+TGG | - | chr6_1:96927027-96927046 | Msa0900710:intron | 35.0% | |
AAAGACTAATGGAAGAACTC+GGG | + | chr6_1:96927116-96927135 | None:intergenic | 35.0% | |
CAAAGACTAATGGAAGAACT+CGG | + | chr6_1:96927117-96927136 | None:intergenic | 35.0% | |
TATGAATCCTAGCAATGAAG+CGG | + | chr6_1:96927547-96927566 | None:intergenic | 35.0% | |
ATTGCTAGGATTCATACTTG+AGG | - | chr6_1:96927551-96927570 | Msa0900710:intron | 35.0% | |
TTCACCGAGATAGAAAAGAT+AGG | + | chr6_1:96927683-96927702 | None:intergenic | 35.0% | |
! | ATCCCTAAAATCTTGTTTGC+TGG | - | chr6_1:96927708-96927727 | Msa0900710:intron | 35.0% |
! | ATTAAAGGCACAATTGGCTA+GGG | + | chr6_1:96927757-96927776 | None:intergenic | 35.0% |
! | AATTAAAGGCACAATTGGCT+AGG | + | chr6_1:96927758-96927777 | None:intergenic | 35.0% |
! | CCAAGAATTAAAGGCACAAT+TGG | + | chr6_1:96927763-96927782 | None:intergenic | 35.0% |
CCAATTGTGCCTTTAATTCT+TGG | - | chr6_1:96927760-96927779 | Msa0900710:intron | 35.0% | |
TTCTTGGACTTGATCTTTGT+TGG | - | chr6_1:96927776-96927795 | Msa0900710:intron | 35.0% | |
TCTTGGACTTGATCTTTGTT+GGG | - | chr6_1:96927777-96927796 | Msa0900710:intron | 35.0% | |
! | GATTCTTTCATAGTTAGCCT+TGG | + | chr6_1:96927906-96927925 | None:intergenic | 35.0% |
AATCTCTTGTACCAACATCT+AGG | - | chr6_1:96927927-96927946 | Msa0900710:intron | 35.0% | |
! | ATCTATGTACGGTCTAAAAC+AGG | + | chr6_1:96927955-96927974 | None:intergenic | 35.0% |
AGGTTGACCAAATCTATGTA+CGG | + | chr6_1:96927966-96927985 | None:intergenic | 35.0% | |
!! | GAAAGGAAAACTTGGTTTGT+AGG | + | chr6_1:96927986-96928005 | None:intergenic | 35.0% |
ATATATATGCTCCAACCAGA+AGG | + | chr6_1:96928023-96928042 | None:intergenic | 35.0% | |
CATTGCCAAAACTATTCTGA+TGG | - | chr6_1:96928118-96928137 | Msa0900710:intron | 35.0% | |
! | CACTACCATCAGAATAGTTT+TGG | + | chr6_1:96928126-96928145 | None:intergenic | 35.0% |
TTTGTATTGTTGGACTCATC+TGG | - | chr6_1:96928518-96928537 | Msa0900710:intron | 35.0% | |
!! | GATCTAGCTTTGTTCTTTCT+TGG | - | chr6_1:96928771-96928790 | Msa0900710:intron | 35.0% |
TGTAAGGAAGAATAATCAGG+TGG | - | chr6_1:96928830-96928849 | Msa0900710:intron | 35.0% | |
TGAAAACACCAATGGAGATT+TGG | + | chr6_1:96928865-96928884 | None:intergenic | 35.0% | |
TTCAAACCAATTGCAGTTGA+TGG | - | chr6_1:96928881-96928900 | Msa0900710:intron | 35.0% | |
AATGGAGGAGAATATGTAGA+TGG | + | chr6_1:96929106-96929125 | None:intergenic | 35.0% | |
AAGTGCTTAAGAACAGACAA+TGG | + | chr6_1:96929124-96929143 | None:intergenic | 35.0% | |
! | CAAGGAATTTAAAGCACAAG+TGG | + | chr6_1:96929170-96929189 | None:intergenic | 35.0% |
! | CATTTATTGATGACCACTCT+AGG | + | chr6_1:96929243-96929262 | None:intergenic | 35.0% |
! | AAAATATTTTGCTCCTCCCA+TGG | - | chr6_1:96929267-96929286 | Msa0900710:intron | 35.0% |
CTTGATACATTCTGATGTGT+GGG | + | chr6_1:96929308-96929327 | None:intergenic | 35.0% | |
ACTTGATACATTCTGATGTG+TGG | + | chr6_1:96929309-96929328 | None:intergenic | 35.0% | |
TTTGCTTCTAGTAGTTACTC+TGG | - | chr6_1:96929339-96929358 | Msa0900710:intron | 35.0% | |
AAGAAGAAACGACAATGATG+TGG | + | chr6_1:96929501-96929520 | None:intergenic | 35.0% | |
! | ACATCATTGTCGTTTCTTCT+TGG | - | chr6_1:96929500-96929519 | Msa0900710:intron | 35.0% |
GGTACTATTCGCAAAATACA+AGG | + | chr6_1:96929733-96929752 | None:intergenic | 35.0% | |
ATCACACCTTAGAAGTTGTT+GGG | + | chr6_1:96929786-96929805 | None:intergenic | 35.0% | |
GATGGAGAAATCTTGTATAG+CGG | + | chr6_1:96929952-96929971 | None:intergenic | 35.0% | |
CAAGATTTCTCCATCATCTA+AGG | - | chr6_1:96929957-96929976 | Msa0900710:CDS | 35.0% | |
TGTTGGAACAACAAAAGGAA+TGG | + | chr6_1:96930030-96930049 | None:intergenic | 35.0% | |
!! | TATGAGAGGGCATTATAAGA+GGG | + | chr6_1:96930055-96930074 | None:intergenic | 35.0% |
GTAGATCAAAATCTCAGAGA+AGG | + | chr6_1:96930104-96930123 | None:intergenic | 35.0% | |
AGAATCTAGACGCAAGAATA+AGG | + | chr6_1:96930214-96930233 | None:intergenic | 35.0% | |
!!! | CTTCATTTTGATGATGTTGC+TGG | + | chr6_1:96930252-96930271 | None:intergenic | 35.0% |
TTCAGCTATTGTGAAATCTG+AGG | - | chr6_1:96930362-96930381 | Msa0900710:intron | 35.0% | |
CTGAGCAAATAGTGTATTCA+TGG | - | chr6_1:96930392-96930411 | Msa0900710:intron | 35.0% | |
! | TGCTAATTTGCACTTAGCAA+TGG | + | chr6_1:96930586-96930605 | None:intergenic | 35.0% |
TGATCAAAAGTGGAAAGAGA+TGG | + | chr6_1:96930622-96930641 | None:intergenic | 35.0% | |
CAGATATCACTGATCAAAAG+TGG | + | chr6_1:96930632-96930651 | None:intergenic | 35.0% | |
! | TTTTGATCAGTGATATCTGC+AGG | - | chr6_1:96930633-96930652 | Msa0900710:intron | 35.0% |
AATTGCCTAGATGCAATTGA+TGG | + | chr6_1:96930663-96930682 | None:intergenic | 35.0% | |
GACTCTGATTTATATAGCAG+TGG | - | chr6_1:96926670-96926689 | Msa0900710:intron | 35.0% | |
TCTCTTCCATACAATTCCTA+CGG | - | chr6_1:96926728-96926747 | Msa0900710:intron | 35.0% | |
GAAATGGTCAACACCATAAA+AGG | + | chr6_1:96926786-96926805 | None:intergenic | 35.0% | |
TAAGAGATAAGCCACCTTAT+GGG | + | chr6_1:96931809-96931828 | None:intergenic | 35.0% | |
GACATACACTCTTGTTAAGT+TGG | + | chr6_1:96931960-96931979 | None:intergenic | 35.0% | |
! | CTTAACAAGAGTGTATGTCT+TGG | - | chr6_1:96931961-96931980 | Msa0900710:CDS | 35.0% |
GTCTTGGTTATATAGGTATG+GGG | - | chr6_1:96931977-96931996 | Msa0900710:CDS | 35.0% | |
ATTTAACACAGATGAAGGCA+TGG | - | chr6_1:96932180-96932199 | Msa0900710:CDS | 35.0% | |
AAAATCTTAGGGAGCAATGT+TGG | - | chr6_1:96932292-96932311 | Msa0900710:CDS | 35.0% | |
!!! | GGTTTTTTCCATTGGTGGTA+GGG | + | chr6_1:96923884-96923903 | None:intergenic | 40.0% |
!!! | TGGTTTTTTCCATTGGTGGT+AGG | + | chr6_1:96923885-96923904 | None:intergenic | 40.0% |
!!! | GGAATGGTTTTTTCCATTGG+TGG | + | chr6_1:96923889-96923908 | None:intergenic | 40.0% |
GAAGCACATGAACTTACACA+AGG | - | chr6_1:96924006-96924025 | Msa0900710:three_prime_UTR | 40.0% | |
CTTTCACTGGCAATGAAAAG+AGG | + | chr6_1:96924158-96924177 | None:intergenic | 40.0% | |
!! | ATTTTCTGGTAGCATGGCTT+TGG | - | chr6_1:96924221-96924240 | Msa0900710:CDS | 40.0% |
TTTCTTGCTAAGGCTATTGC+TGG | - | chr6_1:96924354-96924373 | Msa0900710:intron | 40.0% | |
TGGAACTGGTCAGATTGTTA+AGG | - | chr6_1:96924377-96924396 | Msa0900710:intron | 40.0% | |
GGAACTGGTCAGATTGTTAA+GGG | - | chr6_1:96924378-96924397 | Msa0900710:intron | 40.0% | |
ATGCTTACACCAATCAGGTT+TGG | - | chr6_1:96924418-96924437 | Msa0900710:intron | 40.0% | |
!!! | CTTGTTTTGGCTTCTTTAGC+CGG | - | chr6_1:96924700-96924719 | Msa0900710:intron | 40.0% |
!! | TCATTTTGATCAAGCGATCG+TGG | + | chr6_1:96924804-96924823 | None:intergenic | 40.0% |
! | CATCGTTCGTATGACTTTTC+AGG | + | chr6_1:96925225-96925244 | None:intergenic | 40.0% |
CTGAAAAGTCATACGAACGA+TGG | - | chr6_1:96925223-96925242 | Msa0900710:intron | 40.0% | |
!! | TTAATTTTGATGCGCTGTCG+TGG | + | chr6_1:96925281-96925300 | None:intergenic | 40.0% |
! | AATGGTGTTGGAATAGTGAG+TGG | - | chr6_1:96925445-96925464 | Msa0900710:intron | 40.0% |
TTTACATAACCTGACCGAAC+TGG | - | chr6_1:96925668-96925687 | Msa0900710:intron | 40.0% | |
CTTAATTGAACCGACCAGTT+CGG | + | chr6_1:96925685-96925704 | None:intergenic | 40.0% | |
! | TGGTCGGTTCAATTAAGAAC+CGG | - | chr6_1:96925688-96925707 | Msa0900710:intron | 40.0% |
CAAATCGTAGTCGAACTAAC+AGG | + | chr6_1:96925723-96925742 | None:intergenic | 40.0% | |
! | ATGAACAGGTTGAATCAACC+GGG | + | chr6_1:96925794-96925813 | None:intergenic | 40.0% |
!! | GGCGGATAGAGTTTGTTTTT+CGG | + | chr6_1:96926347-96926366 | None:intergenic | 40.0% |
AACCATTCTTGTTGCAGCTT+GGG | + | chr6_1:96926374-96926393 | None:intergenic | 40.0% | |
AAACCATTCTTGTTGCAGCT+TGG | + | chr6_1:96926375-96926394 | None:intergenic | 40.0% | |
TTCGAGAAGTGGTAGAGAAA+GGG | + | chr6_1:96926981-96927000 | None:intergenic | 40.0% | |
CTACCACTTCTCGAACAAAA+TGG | - | chr6_1:96926986-96927005 | Msa0900710:intron | 40.0% | |
AAGCATGCAAGGAAGCTATT+TGG | + | chr6_1:96927143-96927162 | None:intergenic | 40.0% | |
!! | GTCTGGTCTTGTACATATCA+TGG | - | chr6_1:96927464-96927483 | Msa0900710:intron | 40.0% |
ATGAATCCTAGCAATGAAGC+GGG | + | chr6_1:96927546-96927565 | None:intergenic | 40.0% | |
ATAGGAAGTGGGGTAGATAT+TGG | - | chr6_1:96927588-96927607 | Msa0900710:intron | 40.0% | |
! | GGCCAGCAAACAAGATTTTA+GGG | + | chr6_1:96927713-96927732 | None:intergenic | 40.0% |
GTTGTATGTGGATGACATGT+TGG | + | chr6_1:96927811-96927830 | None:intergenic | 40.0% | |
AGAACACGGAAAGGAAAACT+TGG | + | chr6_1:96927994-96928013 | None:intergenic | 40.0% | |
!!! | AGGTTTTGAAGAACACGGAA+AGG | + | chr6_1:96928003-96928022 | None:intergenic | 40.0% |
!!! | CCAGAAGGTTTTGAAGAACA+CGG | + | chr6_1:96928008-96928027 | None:intergenic | 40.0% |
GTTCTTCAAAACCTTCTGGT+TGG | - | chr6_1:96928009-96928028 | Msa0900710:intron | 40.0% | |
! | ATGGTAGTGAGTCTAACAAC+TGG | - | chr6_1:96928137-96928156 | Msa0900710:intron | 40.0% |
! | TGGTAGTGAGTCTAACAACT+GGG | - | chr6_1:96928138-96928157 | Msa0900710:intron | 40.0% |
! | AAAGGGTATGCTCAGAAAGA+AGG | + | chr6_1:96928188-96928207 | None:intergenic | 40.0% |
! | GAACTTGTTCAACTTCCCAA+GGG | + | chr6_1:96928299-96928318 | None:intergenic | 40.0% |
CATTACATAGTCTGAATGCC+AGG | - | chr6_1:96928460-96928479 | Msa0900710:intron | 40.0% | |
TCGTCGAACGTTTGTATTGT+TGG | - | chr6_1:96928508-96928527 | Msa0900710:intron | 40.0% | |
TCATCTGGTGCTTGTTCATA+TGG | - | chr6_1:96928533-96928552 | Msa0900710:intron | 40.0% | |
AGTACATCCGAACACATGTA+AGG | - | chr6_1:96928814-96928833 | Msa0900710:intron | 40.0% | |
AGATCGATTGATCACGTAAC+AGG | - | chr6_1:96928904-96928923 | Msa0900710:intron | 40.0% | |
ACATGGCTCTTGTTCTATCT+AGG | - | chr6_1:96928978-96928997 | Msa0900710:intron | 40.0% | |
TGCTTAAGAACAGACAATGG+AGG | + | chr6_1:96929121-96929140 | None:intergenic | 40.0% | |
GCACAAGTGGAACTTGAAAA+TGG | + | chr6_1:96929157-96929176 | None:intergenic | 40.0% | |
! | TGACCACTCTAGGAGATTAT+GGG | + | chr6_1:96929233-96929252 | None:intergenic | 40.0% |
! | ATGACCACTCTAGGAGATTA+TGG | + | chr6_1:96929234-96929253 | None:intergenic | 40.0% |
GAGTCACCACAAATATCCAT+GGG | + | chr6_1:96929286-96929305 | None:intergenic | 40.0% | |
TCAAACCACGTTCTGACATA+TGG | - | chr6_1:96929461-96929480 | Msa0900710:intron | 40.0% | |
ATGATGTGGCATCACAAACT+AGG | + | chr6_1:96929487-96929506 | None:intergenic | 40.0% | |
TTAAGTTTCCACCTTCAGTG+TGG | - | chr6_1:96929635-96929654 | Msa0900710:intron | 40.0% | |
ACCAATCCCAACAACTTCTA+AGG | - | chr6_1:96929777-96929796 | Msa0900710:intron | 40.0% | |
ACCTTAGAAGTTGTTGGGAT+TGG | + | chr6_1:96929781-96929800 | None:intergenic | 40.0% | |
GATCACACCTTAGAAGTTGT+TGG | + | chr6_1:96929787-96929806 | None:intergenic | 40.0% | |
TCGGAAGGATCTGTATTCAT+GGG | + | chr6_1:96929814-96929833 | None:intergenic | 40.0% | |
AATACAGATCCTTCCGAGAT+AGG | - | chr6_1:96929817-96929836 | Msa0900710:intron | 40.0% | |
!! | GCAGCAATTAGTTCTAAAGG+TGG | + | chr6_1:96929928-96929947 | None:intergenic | 40.0% |
!! | GGAGCAGCAATTAGTTCTAA+AGG | + | chr6_1:96929931-96929950 | None:intergenic | 40.0% |
GTTGCAAGTACCTTAGATGA+TGG | + | chr6_1:96929970-96929989 | None:intergenic | 40.0% | |
!! | GTATGAGAGGGCATTATAAG+AGG | + | chr6_1:96930056-96930075 | None:intergenic | 40.0% |
AAGGATAGAAAAGCAAGCAG+AGG | + | chr6_1:96930187-96930206 | None:intergenic | 40.0% | |
GACGCAAGAATAAGGAAGAA+AGG | + | chr6_1:96930206-96930225 | None:intergenic | 40.0% | |
AAAGTCTGCAAAGGAGATCT+GGG | + | chr6_1:96930532-96930551 | None:intergenic | 40.0% | |
AAAAGTCTGCAAAGGAGATC+TGG | + | chr6_1:96930533-96930552 | None:intergenic | 40.0% | |
TGCAGAGAAAAAGTCTGCAA+AGG | + | chr6_1:96930541-96930560 | None:intergenic | 40.0% | |
GTCTACCATCAATTGCATCT+AGG | - | chr6_1:96930655-96930674 | Msa0900710:intron | 40.0% | |
ATGGGAGTAATTTCTCACTG+TGG | + | chr6_1:96930719-96930738 | None:intergenic | 40.0% | |
!!! | TTGTTGCCATGGTTTTGAAC+CGG | - | chr6_1:96930760-96930779 | Msa0900710:CDS | 40.0% |
TGTAATCCGGTTCAAAACCA+TGG | + | chr6_1:96930769-96930788 | None:intergenic | 40.0% | |
CACGGTGAAATAGTGTAATC+CGG | + | chr6_1:96930782-96930801 | None:intergenic | 40.0% | |
ATGGTTACTATTCTCACGTG+TGG | + | chr6_1:96930896-96930915 | None:intergenic | 40.0% | |
ACCATGAACAATAATCGCAG+CGG | - | chr6_1:96930911-96930930 | Msa0900710:intron | 40.0% | |
AAGAGATAAGCCACCTTATG+GGG | + | chr6_1:96931808-96931827 | None:intergenic | 40.0% | |
CTAAGAGATAAGCCACCTTA+TGG | + | chr6_1:96931810-96931829 | None:intergenic | 40.0% | |
!! | TTCCATTGGTGGTAGGGTTT+TGG | + | chr6_1:96923878-96923897 | None:intergenic | 45.0% |
AATACTAACCAATGCCCCCA+AGG | - | chr6_1:96924617-96924636 | Msa0900710:intron | 45.0% | |
GATAAATGGTGGCAATGGCA+TGG | - | chr6_1:96925041-96925060 | Msa0900710:intron | 45.0% | |
ATCTTAAGGAATGCCTGTCC+TGG | + | chr6_1:96925502-96925521 | None:intergenic | 45.0% | |
! | GGTCGGTTCAATTAAGAACC+GGG | - | chr6_1:96925689-96925708 | Msa0900710:intron | 45.0% |
! | TGTTTCAAGTCGATGACGAC+TGG | - | chr6_1:96925741-96925760 | Msa0900710:intron | 45.0% |
GACATCCGAATCCCAAATCA+TGG | + | chr6_1:96925898-96925917 | None:intergenic | 45.0% | |
! | CAAGGTTTTTGATGCAGCAG+AGG | - | chr6_1:96926318-96926337 | Msa0900710:intron | 45.0% |
! | GGTGGTAGAGTTTTTACCGT+AGG | + | chr6_1:96926747-96926766 | None:intergenic | 45.0% |
TGAACTTTCGATCATGCCGT+AGG | - | chr6_1:96926861-96926880 | Msa0900710:intron | 45.0% | |
GTTCGAGAAGTGGTAGAGAA+AGG | + | chr6_1:96926982-96927001 | None:intergenic | 45.0% | |
AGAGTGCATTGCACATTGCA+AGG | + | chr6_1:96927056-96927075 | None:intergenic | 45.0% | |
TATGTGTTCACACTTGCAGG+AGG | + | chr6_1:96927243-96927262 | None:intergenic | 45.0% | |
GGTTATGTGTTCACACTTGC+AGG | + | chr6_1:96927246-96927265 | None:intergenic | 45.0% | |
!! | AGATCCTGGTAAAGAGCACT+GGG | + | chr6_1:96927406-96927425 | None:intergenic | 45.0% |
! | AGTCGATTTATGGCAGATCC+TGG | + | chr6_1:96927420-96927439 | None:intergenic | 45.0% |
TGAATCCTAGCAATGAAGCG+GGG | + | chr6_1:96927545-96927564 | None:intergenic | 45.0% | |
! | GGGCCAGCAAACAAGATTTT+AGG | + | chr6_1:96927714-96927733 | None:intergenic | 45.0% |
AGTTCGAGATGAAGGACTTG+GGG | + | chr6_1:96927734-96927753 | None:intergenic | 45.0% | |
GAGTTCGAGATGAAGGACTT+GGG | + | chr6_1:96927735-96927754 | None:intergenic | 45.0% | |
GTATGTGGATGACATGTTGG+TGG | + | chr6_1:96927808-96927827 | None:intergenic | 45.0% | |
TAAAACAGGCGCCTAGATGT+TGG | + | chr6_1:96927941-96927960 | None:intergenic | 45.0% | |
CCGTGTTCTTCAAAACCTTC+TGG | - | chr6_1:96928005-96928024 | Msa0900710:intron | 45.0% | |
GGTAGTGAGTCTAACAACTG+GGG | - | chr6_1:96928139-96928158 | Msa0900710:intron | 45.0% | |
GTGCAAGACTGGTGGTTAAA+GGG | + | chr6_1:96928205-96928224 | None:intergenic | 45.0% | |
AGAACGATATCGTGCAAGAC+TGG | + | chr6_1:96928216-96928235 | None:intergenic | 45.0% | |
GTATACCCATTTGTTCCCGA+TGG | - | chr6_1:96928265-96928284 | Msa0900710:intron | 45.0% | |
GAAAGCCATCGGGAACAAAT+GGG | + | chr6_1:96928273-96928292 | None:intergenic | 45.0% | |
TTGTTCAACTTCCCAAGGGT+CGG | + | chr6_1:96928295-96928314 | None:intergenic | 45.0% | |
! | GGAACTTGTTCAACTTCCCA+AGG | + | chr6_1:96928300-96928319 | None:intergenic | 45.0% |
GGCAGCAATGCATGAAGAAA+TGG | + | chr6_1:96928348-96928367 | None:intergenic | 45.0% | |
CTCAGATGTTTCTCTGTGGA+TGG | + | chr6_1:96928369-96928388 | None:intergenic | 45.0% | |
GAAGCTCAGATGTTTCTCTG+TGG | + | chr6_1:96928373-96928392 | None:intergenic | 45.0% | |
GTCAGATTATAACACCAGCC+TGG | + | chr6_1:96928481-96928500 | None:intergenic | 45.0% | |
CTCTACTGCAGCAGTTTCTT+TGG | - | chr6_1:96928598-96928617 | Msa0900710:intron | 45.0% | |
AACAACAAGCTTGTGAGCAG+TGG | - | chr6_1:96928682-96928701 | Msa0900710:intron | 45.0% | |
ACAACAAGCTTGTGAGCAGT+GGG | - | chr6_1:96928683-96928702 | Msa0900710:intron | 45.0% | |
GTTATGCTGACAACGTGAAG+GGG | + | chr6_1:96928724-96928743 | None:intergenic | 45.0% | |
GGTTATGCTGACAACGTGAA+GGG | + | chr6_1:96928725-96928744 | None:intergenic | 45.0% | |
CGATCTCCATCAACTGCAAT+TGG | + | chr6_1:96928890-96928909 | None:intergenic | 45.0% | |
AGGAGTGGCTAAGTCTTTCT+GGG | + | chr6_1:96928948-96928967 | None:intergenic | 45.0% | |
TCTGCTACACCATTCTGTTG+AGG | - | chr6_1:96929019-96929038 | Msa0900710:intron | 45.0% | |
ACACCCATAATCTCCTAGAG+TGG | - | chr6_1:96929227-96929246 | Msa0900710:intron | 45.0% | |
TCACCACAAATATCCATGGG+AGG | + | chr6_1:96929283-96929302 | None:intergenic | 45.0% | |
GGAGTCACCACAAATATCCA+TGG | + | chr6_1:96929287-96929306 | None:intergenic | 45.0% | |
CAAATTCACTGTCTTGAGCC+CGG | - | chr6_1:96929411-96929430 | Msa0900710:intron | 45.0% | |
AAATTCACTGTCTTGAGCCC+GGG | - | chr6_1:96929412-96929431 | Msa0900710:intron | 45.0% | |
CGGAACAAAATCTTCTACCC+GGG | + | chr6_1:96929432-96929451 | None:intergenic | 45.0% | |
GCGGAACAAAATCTTCTACC+CGG | + | chr6_1:96929433-96929452 | None:intergenic | 45.0% | |
ACGTGGTTTGAAAGCTCTTG+CGG | + | chr6_1:96929452-96929471 | None:intergenic | 45.0% | |
AGTAGTAAAGGGAAACCTCG+TGG | + | chr6_1:96929614-96929633 | None:intergenic | 45.0% | |
ATTGGGCAATTGGATGACCT+CGG | + | chr6_1:96929670-96929689 | None:intergenic | 45.0% | |
CTCGGAAGGATCTGTATTCA+TGG | + | chr6_1:96929815-96929834 | None:intergenic | 45.0% | |
TCCTTCCGAGATAGGTTCAT+AGG | - | chr6_1:96929825-96929844 | Msa0900710:intron | 45.0% | |
ACCTATGAACCTATCTCGGA+AGG | + | chr6_1:96929829-96929848 | None:intergenic | 45.0% | |
CTGCACCTATGAACCTATCT+CGG | + | chr6_1:96929833-96929852 | None:intergenic | 45.0% | |
ATATGACTCCACGCAAGGAT+TGG | + | chr6_1:96929858-96929877 | None:intergenic | 45.0% | |
GCTCAATGATGGTTGGATAG+TGG | + | chr6_1:96929899-96929918 | None:intergenic | 45.0% | |
GAAATGCGCTCAATGATGGT+TGG | + | chr6_1:96929906-96929925 | None:intergenic | 45.0% | |
ACTTGCAACACAACCTTGAG+AGG | - | chr6_1:96929981-96930000 | Msa0900710:intron | 45.0% | |
!! | GGGAGTGTTGGAACAACAAA+AGG | + | chr6_1:96930035-96930054 | None:intergenic | 45.0% |
! | GGCATTATAAGAGGGAGTGT+TGG | + | chr6_1:96930047-96930066 | None:intergenic | 45.0% |
GCTACAGTTGTGGTATGAGA+GGG | + | chr6_1:96930068-96930087 | None:intergenic | 45.0% | |
TGCTACAGTTGTGGTATGAG+AGG | + | chr6_1:96930069-96930088 | None:intergenic | 45.0% | |
TCTAGTGAGAGTCAAGATCG+TGG | + | chr6_1:96930126-96930145 | None:intergenic | 45.0% | |
GCACTTAGCAATGGCAGATT+CGG | + | chr6_1:96930577-96930596 | None:intergenic | 45.0% | |
TCCGCTGCGATTATTGTTCA+TGG | + | chr6_1:96930915-96930934 | None:intergenic | 45.0% | |
! | AACAGTGGTATCAGAGCACT+TGG | + | chr6_1:96930952-96930971 | None:intergenic | 45.0% |
AAGTGCTCTGATACCACTGT+TGG | - | chr6_1:96930951-96930970 | Msa0900710:intron | 45.0% | |
AGTGCTCTGATACCACTGTT+GGG | - | chr6_1:96930952-96930971 | Msa0900710:intron | 45.0% | |
GCTATTCTGATACCCAACAG+TGG | + | chr6_1:96926561-96926580 | None:intergenic | 45.0% | |
! | GGTGGTAGAGTTTTTACCGT+AGG | + | chr6_1:96926747-96926766 | None:intergenic | 45.0% |
TATAGGTATGGGGAAGAAGC+AGG | - | chr6_1:96931987-96932006 | Msa0900710:CDS | 45.0% | |
ATAGGTATGGGGAAGAAGCA+GGG | - | chr6_1:96931988-96932007 | Msa0900710:CDS | 45.0% | |
GAGCATGTATTTGCAACTGC+AGG | - | chr6_1:96932020-96932039 | Msa0900710:CDS | 45.0% | |
GACATGCTGCTAATACTGCT+TGG | - | chr6_1:96932042-96932061 | Msa0900710:CDS | 45.0% | |
TGCACTAGAAGCTGGATTGA+TGG | + | chr6_1:96932090-96932109 | None:intergenic | 45.0% | |
!!! | TTTAAAAATTAAAATTTTCT+AGG | + | chr6_1:96926424-96926443 | None:intergenic | 5.0% |
!!! | TGGTGGTAGGGTTTTGGAGT+CGG | + | chr6_1:96923872-96923891 | None:intergenic | 50.0% |
CTCCAAAACCCTACCACCAA+TGG | - | chr6_1:96923873-96923892 | Msa0900710:three_prime_UTR | 50.0% | |
GGCTCATGACCATCTTTCAC+TGG | + | chr6_1:96924171-96924190 | None:intergenic | 50.0% | |
GGTCATGAGCCTCTAAGCTA+TGG | - | chr6_1:96924180-96924199 | Msa0900710:CDS | 50.0% | |
CTTGCTAAGGCTATTGCTGG+TGG | - | chr6_1:96924357-96924376 | Msa0900710:intron | 50.0% | |
AAGGCTATTGCTGGTGGAAC+TGG | - | chr6_1:96924363-96924382 | Msa0900710:intron | 50.0% | |
CCTGGTTGAGATTTGAGGAC+AGG | + | chr6_1:96925484-96925503 | None:intergenic | 50.0% | |
CCTGTCCTCAAATCTCAACC+AGG | - | chr6_1:96925481-96925500 | Msa0900710:intron | 50.0% | |
CCTGTCCTGGTTGAGATTTG+AGG | + | chr6_1:96925489-96925508 | None:intergenic | 50.0% | |
CCTCAAATCTCAACCAGGAC+AGG | - | chr6_1:96925486-96925505 | Msa0900710:intron | 50.0% | |
GCATTCCTTAAGATGCTCCC+AGG | - | chr6_1:96925508-96925527 | Msa0900710:intron | 50.0% | |
AAGCCAACAGAACCTCTCCT+GGG | + | chr6_1:96925528-96925547 | None:intergenic | 50.0% | |
CATAACCTGACCGAACTGGT+CGG | - | chr6_1:96925672-96925691 | Msa0900710:intron | 50.0% | |
AACTAACAGGCAGACTGACC+CGG | + | chr6_1:96925710-96925729 | None:intergenic | 50.0% | |
!! | GTTGGAAGTGCTACTCAACC+CGG | - | chr6_1:96925773-96925792 | Msa0900710:intron | 50.0% |
CATTCTTGTTGCAGCTTGGG+AGG | + | chr6_1:96926371-96926390 | None:intergenic | 50.0% | |
CTCCCAAGCTGCAACAAGAA+TGG | - | chr6_1:96926369-96926388 | Msa0900710:intron | 50.0% | |
ACTTTCGATCATGCCGTAGG+AGG | - | chr6_1:96926864-96926883 | Msa0900710:intron | 50.0% | |
!! | ACATGGTGTCGATCCTCCTA+CGG | + | chr6_1:96926880-96926899 | None:intergenic | 50.0% |
! | CAGATCCTGGTAAAGAGCAC+TGG | + | chr6_1:96927407-96927426 | None:intergenic | 50.0% |
! | GGGAGCGGTTAGTCGATTTA+TGG | + | chr6_1:96927430-96927449 | None:intergenic | 50.0% |
CCAGACATTGCACAAGCAGT+GGG | + | chr6_1:96927450-96927469 | None:intergenic | 50.0% | |
ACCAGACATTGCACAAGCAG+TGG | + | chr6_1:96927451-96927470 | None:intergenic | 50.0% | |
TCGAGTACCCTATGCATCAG+CGG | + | chr6_1:96927508-96927527 | None:intergenic | 50.0% | |
GGAGTTCGAGATGAAGGACT+TGG | + | chr6_1:96927736-96927755 | None:intergenic | 50.0% | |
!! | GTGGATGACATGTTGGTGGT+AGG | + | chr6_1:96927804-96927823 | None:intergenic | 50.0% |
CGTGCAAGACTGGTGGTTAA+AGG | + | chr6_1:96928206-96928225 | None:intergenic | 50.0% | |
ACGATATCGTGCAAGACTGG+TGG | + | chr6_1:96928213-96928232 | None:intergenic | 50.0% | |
GGAAAGCCATCGGGAACAAA+TGG | + | chr6_1:96928274-96928293 | None:intergenic | 50.0% | |
GCTTCTTTCAGCCTCCTGAA+AGG | - | chr6_1:96928388-96928407 | Msa0900710:intron | 50.0% | |
TCAGCCTCCTGAAAGGTTGA+TGG | - | chr6_1:96928395-96928414 | Msa0900710:intron | 50.0% | |
ACATAGTCTGAATGCCAGGC+TGG | - | chr6_1:96928464-96928483 | Msa0900710:intron | 50.0% | |
GGGTTATGCTGACAACGTGA+AGG | + | chr6_1:96928726-96928745 | None:intergenic | 50.0% | |
CAGGAGTGGCTAAGTCTTTC+TGG | + | chr6_1:96928949-96928968 | None:intergenic | 50.0% | |
CATGTTGAGAACAGCAGGAG+TGG | + | chr6_1:96928963-96928982 | None:intergenic | 50.0% | |
CACTCCTGCTGTTCTCAACA+TGG | - | chr6_1:96928961-96928980 | Msa0900710:intron | 50.0% | |
AGAGCCATGTTGAGAACAGC+AGG | + | chr6_1:96928968-96928987 | None:intergenic | 50.0% | |
CCACATACGCCTCAACAGAA+TGG | + | chr6_1:96929031-96929050 | None:intergenic | 50.0% | |
CCATTCTGTTGAGGCGTATG+TGG | - | chr6_1:96929028-96929047 | Msa0900710:intron | 50.0% | |
GCTCCTCCCATGGATATTTG+TGG | - | chr6_1:96929277-96929296 | Msa0900710:intron | 50.0% | |
CTAGGCCATATGTCAGAACG+TGG | + | chr6_1:96929469-96929488 | None:intergenic | 50.0% | |
TCTCTGCTTTCATCACCACG+AGG | - | chr6_1:96929596-96929615 | Msa0900710:CDS | 50.0% | |
TGCAAGATCCACACTGAAGG+TGG | + | chr6_1:96929646-96929665 | None:intergenic | 50.0% | |
TTGGGCAATTGGATGACCTC+GGG | + | chr6_1:96929669-96929688 | None:intergenic | 50.0% | |
! | ACAAGGGGTACGTCACGTAA+AGG | + | chr6_1:96929716-96929735 | None:intergenic | 50.0% |
ATGGCATATGACTCCACGCA+AGG | + | chr6_1:96929863-96929882 | None:intergenic | 50.0% | |
!! | GATGGTTGGATAGTGGACTC+AGG | + | chr6_1:96929892-96929911 | None:intergenic | 50.0% |
GGTGGAAATGCGCTCAATGA+TGG | + | chr6_1:96929910-96929929 | None:intergenic | 50.0% | |
!! | TCAGAAGCGTCAACCTCTCA+AGG | + | chr6_1:96929997-96930016 | None:intergenic | 50.0% |
! | GCAAGCAGAGGCTTTAGTGA+TGG | + | chr6_1:96930175-96930194 | None:intergenic | 50.0% |
AAGCTCGCTCATTCCCCATA+AGG | - | chr6_1:96931792-96931811 | Msa0900710:intron | 50.0% | |
TAGGTATGGGGAAGAAGCAG+GGG | - | chr6_1:96931989-96932008 | Msa0900710:CDS | 50.0% | |
AGTGTAGCTGCACTAGAAGC+TGG | + | chr6_1:96932098-96932117 | None:intergenic | 50.0% | |
TTCCTTAACCGGTGCCTTGG+GGG | + | chr6_1:96924634-96924653 | None:intergenic | 55.0% | |
CTTCCTTAACCGGTGCCTTG+GGG | + | chr6_1:96924635-96924654 | None:intergenic | 55.0% | |
GCTTCCTTAACCGGTGCCTT+GGG | + | chr6_1:96924636-96924655 | None:intergenic | 55.0% | |
TGCTTCCTTAACCGGTGCCT+TGG | + | chr6_1:96924637-96924656 | None:intergenic | 55.0% | |
!! | CCTCTCCTGGGAGCATCTTA+AGG | + | chr6_1:96925516-96925535 | None:intergenic | 55.0% |
CCTTAAGATGCTCCCAGGAG+AGG | - | chr6_1:96925513-96925532 | Msa0900710:intron | 55.0% | |
GAAGCCAACAGAACCTCTCC+TGG | + | chr6_1:96925529-96925548 | None:intergenic | 55.0% | |
TTGAACCGACCAGTTCGGTC+AGG | + | chr6_1:96925680-96925699 | None:intergenic | 55.0% | |
CAAGTCGATGACGACTGGAG+TGG | - | chr6_1:96925746-96925765 | Msa0900710:intron | 55.0% | |
TCTTGTTGCAGCTTGGGAGG+TGG | + | chr6_1:96926368-96926387 | None:intergenic | 55.0% | |
TTGCAGGAGGAGCAGTGAGT+TGG | + | chr6_1:96927230-96927249 | None:intergenic | 55.0% | |
GCATCCCAGTGCTCTTTACC+AGG | - | chr6_1:96927399-96927418 | Msa0900710:intron | 55.0% | |
CATTGCACAAGCAGTGGGAG+CGG | + | chr6_1:96927445-96927464 | None:intergenic | 55.0% | |
CCCACTGCTTGTGCAATGTC+TGG | - | chr6_1:96927447-96927466 | Msa0900710:intron | 55.0% | |
CTTCCCACCGCTGATGCATA+GGG | - | chr6_1:96927498-96927517 | Msa0900710:intron | 55.0% | |
GTACCCTATGCATCAGCGGT+GGG | + | chr6_1:96927504-96927523 | None:intergenic | 55.0% | |
AGTACCCTATGCATCAGCGG+TGG | + | chr6_1:96927505-96927524 | None:intergenic | 55.0% | |
TAGCAATGAAGCGGGGAGGA+TGG | + | chr6_1:96927538-96927557 | None:intergenic | 55.0% | |
ATCCTCCCCGCTTCATTGCT+AGG | - | chr6_1:96927537-96927556 | Msa0900710:intron | 55.0% | |
ATCCTAGCAATGAAGCGGGG+AGG | + | chr6_1:96927542-96927561 | None:intergenic | 55.0% | |
GGCTAGGGAGTTCGAGATGA+AGG | + | chr6_1:96927742-96927761 | None:intergenic | 55.0% | |
GGAGCCATCAACCTTTCAGG+AGG | + | chr6_1:96928402-96928421 | None:intergenic | 55.0% | |
AGGGGAGCCATCAACCTTTC+AGG | + | chr6_1:96928405-96928424 | None:intergenic | 55.0% | |
!! | CGTGAAGGGGTATCGCTTGT+GGG | + | chr6_1:96928711-96928730 | None:intergenic | 55.0% |
!! | ACGTGAAGGGGTATCGCTTG+TGG | + | chr6_1:96928712-96928731 | None:intergenic | 55.0% |
GGGTGCAAGATCCACACTGA+AGG | + | chr6_1:96929649-96929668 | None:intergenic | 55.0% | |
GTGCAGAACCAATCCTTGCG+TGG | - | chr6_1:96929847-96929866 | Msa0900710:intron | 55.0% | |
GCGTGGAGTCATATGCCATG+TGG | - | chr6_1:96929864-96929883 | Msa0900710:intron | 55.0% | |
GATGGCGAGAGGCAGATCAA+CGG | + | chr6_1:96930157-96930176 | None:intergenic | 55.0% | |
! | GAGGCTTTAGTGATGGCGAG+AGG | + | chr6_1:96930168-96930187 | None:intergenic | 55.0% |
CTCGCTCATTCCCCATAAGG+TGG | - | chr6_1:96931795-96931814 | Msa0900710:intron | 55.0% | |
AACCAATGCCCCCAAGGCAC+CGG | - | chr6_1:96924623-96924642 | Msa0900710:intron | 60.0% | |
GCTCCCAGGAGAGGTTCTGT+TGG | - | chr6_1:96925522-96925541 | Msa0900710:intron | 60.0% | |
CGATGACGACTGGAGTGGAC+TGG | - | chr6_1:96925751-96925770 | Msa0900710:intron | 60.0% | |
!! | GACGACTGGAGTGGACTGGT+TGG | - | chr6_1:96925755-96925774 | Msa0900710:intron | 60.0% |
TGTTGCAGCTTGGGAGGTGG+CGG | + | chr6_1:96926365-96926384 | None:intergenic | 60.0% | |
GGCAGCTACGCAAGCATGCA+AGG | + | chr6_1:96927154-96927173 | None:intergenic | 60.0% | |
GCTTCCCACCGCTGATGCAT+AGG | - | chr6_1:96927497-96927516 | Msa0900710:intron | 60.0% | |
CCAAGGGTCGGAAAGCCATC+GGG | + | chr6_1:96928283-96928302 | None:intergenic | 60.0% | |
CCCAAGGGTCGGAAAGCCAT+CGG | + | chr6_1:96928284-96928303 | None:intergenic | 60.0% | |
CCGATGGCTTTCCGACCCTT+GGG | - | chr6_1:96928281-96928300 | Msa0900710:intron | 60.0% | |
CAGTGTGGATCTTGCACCCG+AGG | - | chr6_1:96929650-96929669 | Msa0900710:intron | 60.0% | |
!! | TAGTGGACTCAGGCGCCACA+TGG | + | chr6_1:96929882-96929901 | None:intergenic | 60.0% |
AGAGGCAGATCAACGGAGCG+AGG | + | chr6_1:96930150-96930169 | None:intergenic | 60.0% | |
! | AACCGGTGCCTTGGGGGCAT+TGG | + | chr6_1:96924628-96924647 | None:intergenic | 65.0% |
!! | TGCCCCCAAGGCACCGGTTA+AGG | - | chr6_1:96924629-96924648 | Msa0900710:intron | 65.0% |
CCCGATGGCTTTCCGACCCT+TGG | - | chr6_1:96928280-96928299 | Msa0900710:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 96923859 | 96932439 | 96923859 | ID=Msa0900710;Name=Msa0900710 |
chr6_1 | mRNA | 96923859 | 96932439 | 96923859 | ID=Msa0900710-mRNA-1;Parent=Msa0900710;Name=Msa0900710-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.75|0.6|1|1|1|5|288|334 |
chr6_1 | exon | 96923859 | 96924306 | 96923859 | ID=Msa0900710-mRNA-1:exon:16861;Parent=Msa0900710-mRNA-1 |
chr6_1 | exon | 96929549 | 96929650 | 96929549 | ID=Msa0900710-mRNA-1:exon:16860;Parent=Msa0900710-mRNA-1 |
chr6_1 | exon | 96929897 | 96929981 | 96929897 | ID=Msa0900710-mRNA-1:exon:16859;Parent=Msa0900710-mRNA-1 |
chr6_1 | exon | 96930736 | 96930876 | 96930736 | ID=Msa0900710-mRNA-1:exon:16858;Parent=Msa0900710-mRNA-1 |
chr6_1 | exon | 96931923 | 96932439 | 96931923 | ID=Msa0900710-mRNA-1:exon:16857;Parent=Msa0900710-mRNA-1 |
chr6_1 | CDS | 96931923 | 96932439 | 96931923 | ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1 |
chr6_1 | CDS | 96930736 | 96930876 | 96930736 | ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1 |
chr6_1 | CDS | 96929897 | 96929981 | 96929897 | ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1 |
chr6_1 | CDS | 96929549 | 96929650 | 96929549 | ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1 |
chr6_1 | CDS | 96924147 | 96924306 | 96924147 | ID=Msa0900710-mRNA-1:cds;Parent=Msa0900710-mRNA-1 |
chr6_1 | three_prime_UTR | 96923859 | 96924146 | 96923859 | ID=Msa0900710-mRNA-1:three_prime_utr;Parent=Msa0900710-mRNA-1 |
Gene Sequence |
Protein sequence |