Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926370 | XP_013453168.1 | 96.800 | 375 | 11 | 1 | 1 | 375 | 1 | 374 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926370 | sp|F4JNX2|SDEH4_ARATH | 32.771 | 415 | 201 | 9 | 17 | 374 | 55 | 448 | 5.25e-62 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0926370 | 0.805034 | 1.622092e-49 | -8.615850e-47 |
| Msa0022550 | Msa0926370 | 0.800043 | 1.734050e-48 | -8.615850e-47 |
| Msa0029850 | Msa0926370 | 0.804108 | 2.530654e-49 | -8.615850e-47 |
| Msa0031340 | Msa0926370 | 0.804814 | 1.802760e-49 | -8.615850e-47 |
| Msa0036140 | Msa0926370 | 0.803624 | 3.189398e-49 | -8.615850e-47 |
| Msa0036920 | Msa0926370 | 0.820958 | 5.208449e-53 | -8.615850e-47 |
| Msa0042550 | Msa0926370 | 0.802388 | 5.745653e-49 | -8.615850e-47 |
| Msa0043560 | Msa0926370 | 0.802196 | 6.292153e-49 | -8.615850e-47 |
| Msa0044260 | Msa0926370 | 0.814640 | 1.390289e-51 | -8.615850e-47 |
| Msa0044330 | Msa0926370 | 0.805869 | 1.084058e-49 | -8.615850e-47 |
| Msa0045790 | Msa0926370 | 0.802153 | 6.421101e-49 | -8.615850e-47 |
| Msa0046160 | Msa0926370 | 0.802714 | 4.921847e-49 | -8.615850e-47 |
| Msa0048000 | Msa0926370 | 0.808311 | 3.296862e-50 | -8.615850e-47 |
| Msa0050930 | Msa0926370 | 0.813638 | 2.312736e-51 | -8.615850e-47 |
| Msa0065680 | Msa0926370 | -0.832953 | 7.041194e-56 | -8.615850e-47 |
| Msa0068680 | Msa0926370 | 0.812773 | 3.581377e-51 | -8.615850e-47 |
| Msa0095560 | Msa0926370 | 0.812482 | 4.146574e-51 | -8.615850e-47 |
| Msa0104800 | Msa0926370 | 0.804115 | 2.521434e-49 | -8.615850e-47 |
| Msa0610590 | Msa0926370 | 0.808333 | 3.260372e-50 | -8.615850e-47 |
| Msa0613090 | Msa0926370 | 0.807416 | 5.107993e-50 | -8.615850e-47 |
| Msa0622650 | Msa0926370 | 0.827516 | 1.498239e-54 | -8.615850e-47 |
| Msa0626090 | Msa0926370 | 0.825482 | 4.575740e-54 | -8.615850e-47 |
| Msa0644840 | Msa0926370 | 0.812866 | 3.417977e-51 | -8.615850e-47 |
| Msa0657750 | Msa0926370 | 0.803162 | 3.976263e-49 | -8.615850e-47 |
| Msa0662340 | Msa0926370 | 0.800701 | 1.273965e-48 | -8.615850e-47 |
| Msa0667050 | Msa0926370 | 0.801879 | 7.312185e-49 | -8.615850e-47 |
| Msa0682550 | Msa0926370 | 0.807602 | 4.665649e-50 | -8.615850e-47 |
| Msa0685920 | Msa0926370 | 0.801505 | 8.722183e-49 | -8.615850e-47 |
| Msa0688070 | Msa0926370 | 0.819577 | 1.079843e-52 | -8.615850e-47 |
| Msa0693380 | Msa0926370 | 0.812739 | 3.642713e-51 | -8.615850e-47 |
| Msa0698290 | Msa0926370 | 0.812646 | 3.818464e-51 | -8.615850e-47 |
| Msa0703780 | Msa0926370 | 0.824775 | 6.722193e-54 | -8.615850e-47 |
| Msa0704920 | Msa0926370 | 0.802039 | 6.779211e-49 | -8.615850e-47 |
| Msa0722070 | Msa0926370 | 0.804331 | 2.274181e-49 | -8.615850e-47 |
| Msa0733390 | Msa0926370 | 0.802413 | 5.677040e-49 | -8.615850e-47 |
| Msa0740510 | Msa0926370 | 0.824863 | 6.408579e-54 | -8.615850e-47 |
| Msa0753720 | Msa0926370 | 0.835841 | 1.326406e-56 | -8.615850e-47 |
| Msa0760130 | Msa0926370 | 0.841732 | 3.974308e-58 | -8.615850e-47 |
| Msa0762970 | Msa0926370 | 0.802152 | 6.424872e-49 | -8.615850e-47 |
| Msa0784480 | Msa0926370 | 0.805292 | 1.432463e-49 | -8.615850e-47 |
| Msa0804730 | Msa0926370 | 0.816269 | 6.033455e-52 | -8.615850e-47 |
| Msa0807030 | Msa0926370 | 0.801977 | 6.979717e-49 | -8.615850e-47 |
| Msa0810220 | Msa0926370 | 0.802755 | 4.826756e-49 | -8.615850e-47 |
| Msa0817460 | Msa0926370 | 0.808754 | 2.651714e-50 | -8.615850e-47 |
| Msa0820770 | Msa0926370 | 0.827536 | 1.482094e-54 | -8.615850e-47 |
| Msa0820850 | Msa0926370 | 0.820446 | 6.831604e-53 | -8.615850e-47 |
| Msa0828920 | Msa0926370 | 0.803187 | 3.928826e-49 | -8.615850e-47 |
| Msa0830510 | Msa0926370 | 0.800225 | 1.592837e-48 | -8.615850e-47 |
| Msa0121380 | Msa0926370 | 0.808631 | 2.816188e-50 | -8.615850e-47 |
| Msa0124550 | Msa0926370 | 0.800964 | 1.125545e-48 | -8.615850e-47 |
| Msa0130970 | Msa0926370 | 0.820326 | 7.276956e-53 | -8.615850e-47 |
| Msa0131770 | Msa0926370 | 0.806552 | 7.783779e-50 | -8.615850e-47 |
| Msa0143560 | Msa0926370 | 0.821398 | 4.124733e-53 | -8.615850e-47 |
| Msa0149300 | Msa0926370 | 0.804517 | 2.079341e-49 | -8.615850e-47 |
| Msa0154840 | Msa0926370 | -0.801230 | 9.931695e-49 | -8.615850e-47 |
| Msa0168430 | Msa0926370 | 0.814564 | 1.445055e-51 | -8.615850e-47 |
| Msa0169820 | Msa0926370 | 0.812685 | 3.744091e-51 | -8.615850e-47 |
| Msa0170140 | Msa0926370 | 0.811221 | 7.801592e-51 | -8.615850e-47 |
| Msa0172400 | Msa0926370 | 0.803585 | 3.249435e-49 | -8.615850e-47 |
| Msa0178510 | Msa0926370 | 0.816095 | 6.597276e-52 | -8.615850e-47 |
| Msa0189930 | Msa0926370 | -0.809112 | 2.222892e-50 | -8.615850e-47 |
| Msa0212040 | Msa0926370 | 0.805476 | 1.310569e-49 | -8.615850e-47 |
| Msa0212990 | Msa0926370 | 0.819418 | 1.173701e-52 | -8.615850e-47 |
| Msa0213040 | Msa0926370 | 0.803714 | 3.055478e-49 | -8.615850e-47 |
| Msa0213520 | Msa0926370 | 0.802370 | 5.793342e-49 | -8.615850e-47 |
| Msa0218810 | Msa0926370 | 0.825924 | 3.595554e-54 | -8.615850e-47 |
| Msa0220580 | Msa0926370 | 0.835916 | 1.270160e-56 | -8.615850e-47 |
| Msa0225220 | Msa0926370 | 0.801793 | 7.614361e-49 | -8.615850e-47 |
| Msa0367870 | Msa0926370 | 0.806181 | 9.316206e-50 | -8.615850e-47 |
| Msa0376590 | Msa0926370 | 0.811477 | 6.864191e-51 | -8.615850e-47 |
| Msa0379640 | Msa0926370 | 0.814157 | 1.777261e-51 | -8.615850e-47 |
| Msa0388960 | Msa0926370 | 0.826781 | 2.247237e-54 | -8.615850e-47 |
| Msa0393620 | Msa0926370 | 0.812053 | 5.145538e-51 | -8.615850e-47 |
| Msa0426900 | Msa0926370 | 0.805462 | 1.319611e-49 | -8.615850e-47 |
| Msa0436370 | Msa0926370 | 0.814098 | 1.831543e-51 | -8.615850e-47 |
| Msa0440750 | Msa0926370 | 0.809616 | 1.733118e-50 | -8.615850e-47 |
| Msa0452920 | Msa0926370 | 0.804714 | 1.891549e-49 | -8.615850e-47 |
| Msa0458440 | Msa0926370 | 0.820984 | 5.138037e-53 | -8.615850e-47 |
| Msa0460590 | Msa0926370 | 0.801473 | 8.855689e-49 | -8.615850e-47 |
| Msa0469940 | Msa0926370 | -0.809896 | 1.508162e-50 | -8.615850e-47 |
| Msa0243250 | Msa0926370 | 0.806372 | 8.492058e-50 | -8.615850e-47 |
| Msa0247170 | Msa0926370 | 0.801350 | 9.387087e-49 | -8.615850e-47 |
| Msa0255550 | Msa0926370 | 0.809158 | 2.172374e-50 | -8.615850e-47 |
| Msa0259500 | Msa0926370 | 0.815311 | 9.864137e-52 | -8.615850e-47 |
| Msa0260810 | Msa0926370 | 0.801522 | 8.653275e-49 | -8.615850e-47 |
| Msa0276920 | Msa0926370 | 0.817294 | 3.552496e-52 | -8.615850e-47 |
| Msa0282250 | Msa0926370 | 0.818313 | 2.091782e-52 | -8.615850e-47 |
| Msa0285450 | Msa0926370 | 0.821524 | 3.857582e-53 | -8.615850e-47 |
| Msa0292170 | Msa0926370 | 0.824106 | 9.661744e-54 | -8.615850e-47 |
| Msa0294590 | Msa0926370 | 0.803440 | 3.482066e-49 | -8.615850e-47 |
| Msa0305700 | Msa0926370 | 0.822463 | 2.337642e-53 | -8.615850e-47 |
| Msa0312530 | Msa0926370 | 0.800823 | 1.202601e-48 | -8.615850e-47 |
| Msa0315530 | Msa0926370 | 0.803667 | 3.124811e-49 | -8.615850e-47 |
| Msa0319170 | Msa0926370 | 0.817984 | 2.483016e-52 | -8.615850e-47 |
| Msa0320800 | Msa0926370 | 0.802571 | 5.266084e-49 | -8.615850e-47 |
| Msa0326520 | Msa0926370 | 0.809350 | 1.975789e-50 | -8.615850e-47 |
| Msa0330340 | Msa0926370 | 0.805568 | 1.253900e-49 | -8.615850e-47 |
| Msa0341540 | Msa0926370 | 0.823764 | 1.161735e-53 | -8.615850e-47 |
| Msa0344690 | Msa0926370 | -0.805110 | 1.563355e-49 | -8.615850e-47 |
| Msa0359030 | Msa0926370 | 0.802330 | 5.903597e-49 | -8.615850e-47 |
| Msa0363790 | Msa0926370 | 0.808088 | 3.677882e-50 | -8.615850e-47 |
| Msa0484780 | Msa0926370 | 0.837643 | 4.605185e-57 | -8.615850e-47 |
| Msa0491250 | Msa0926370 | 0.804741 | 1.867446e-49 | -8.615850e-47 |
| Msa0512900 | Msa0926370 | 0.814212 | 1.728156e-51 | -8.615850e-47 |
| Msa0516370 | Msa0926370 | 0.808216 | 3.452959e-50 | -8.615850e-47 |
| Msa0518380 | Msa0926370 | 0.838472 | 2.817579e-57 | -8.615850e-47 |
| Msa0523460 | Msa0926370 | 0.811543 | 6.643963e-51 | -8.615850e-47 |
| Msa0526940 | Msa0926370 | 0.806492 | 8.011015e-50 | -8.615850e-47 |
| Msa0536220 | Msa0926370 | 0.806822 | 6.823750e-50 | -8.615850e-47 |
| Msa0545210 | Msa0926370 | 0.820205 | 7.756396e-53 | -8.615850e-47 |
| Msa0572420 | Msa0926370 | 0.812861 | 3.425653e-51 | -8.615850e-47 |
| Msa0572480 | Msa0926370 | 0.800811 | 1.209886e-48 | -8.615850e-47 |
| Msa0574390 | Msa0926370 | 0.807079 | 6.022353e-50 | -8.615850e-47 |
| Msa0576680 | Msa0926370 | 0.803030 | 4.234746e-49 | -8.615850e-47 |
| Msa0578970 | Msa0926370 | 0.810549 | 1.090873e-50 | -8.615850e-47 |
| Msa0581050 | Msa0926370 | 0.800477 | 1.415016e-48 | -8.615850e-47 |
| Msa0861090 | Msa0926370 | 0.826681 | 2.374285e-54 | -8.615850e-47 |
| Msa0861130 | Msa0926370 | 0.813169 | 2.931978e-51 | -8.615850e-47 |
| Msa0861540 | Msa0926370 | 0.811656 | 6.277850e-51 | -8.615850e-47 |
| Msa0866410 | Msa0926370 | 0.805018 | 1.634442e-49 | -8.615850e-47 |
| Msa0870380 | Msa0926370 | 0.803381 | 3.582319e-49 | -8.615850e-47 |
| Msa0870530 | Msa0926370 | 0.847324 | 1.243043e-59 | -8.615850e-47 |
| Msa0878510 | Msa0926370 | 0.801780 | 7.659827e-49 | -8.615850e-47 |
| Msa0882510 | Msa0926370 | 0.804409 | 2.190790e-49 | -8.615850e-47 |
| Msa0892080 | Msa0926370 | 0.806780 | 6.966515e-50 | -8.615850e-47 |
| Msa0892570 | Msa0926370 | 0.806739 | 7.106527e-50 | -8.615850e-47 |
| Msa0893800 | Msa0926370 | 0.802461 | 5.549971e-49 | -8.615850e-47 |
| Msa0898670 | Msa0926370 | 0.803853 | 2.858846e-49 | -8.615850e-47 |
| Msa0900710 | Msa0926370 | 0.830066 | 3.620034e-55 | -8.615850e-47 |
| Msa0903700 | Msa0926370 | 0.801204 | 1.005628e-48 | -8.615850e-47 |
| Msa0924310 | Msa0926370 | 0.842316 | 2.785284e-58 | -8.615850e-47 |
| Msa0926370 | Msa0926470 | 0.820048 | 8.427714e-53 | -8.615850e-47 |
| Msa0926370 | Msa0934890 | 0.818968 | 1.486245e-52 | -8.615850e-47 |
| Msa0926370 | Msa0936210 | 0.812562 | 3.983975e-51 | -8.615850e-47 |
| Msa0926370 | Msa0954130 | 0.805955 | 1.039841e-49 | -8.615850e-47 |
| Msa0926370 | Msa0962840 | 0.801428 | 9.046011e-49 | -8.615850e-47 |
| Msa0926370 | Msa0964310 | 0.811541 | 6.650647e-51 | -8.615850e-47 |
| Msa0926370 | Msa0969450 | 0.812884 | 3.386958e-51 | -8.615850e-47 |
| Msa0926370 | Msa0969520 | 0.835853 | 1.317309e-56 | -8.615850e-47 |
| Msa0926370 | Msa0998600 | 0.801217 | 9.991613e-49 | -8.615850e-47 |
| Msa0926370 | Msa1001390 | 0.812847 | 3.450328e-51 | -8.615850e-47 |
| Msa0926370 | Msa1002850 | 0.830473 | 2.879842e-55 | -8.615850e-47 |
| Msa0926370 | Msa1021510 | 0.803476 | 3.423954e-49 | -8.615850e-47 |
| Msa0926370 | Msa1031930 | 0.829659 | 4.548297e-55 | -8.615850e-47 |
| Msa0926370 | Msa1032800 | 0.812379 | 4.367899e-51 | -8.615850e-47 |
| Msa0926370 | Msa1035960 | 0.802599 | 5.198181e-49 | -8.615850e-47 |
| Msa0926370 | Msa1036610 | 0.800940 | 1.138282e-48 | -8.615850e-47 |
| Msa0926370 | Msa1039710 | -0.801314 | 9.544461e-49 | -8.615850e-47 |
| Msa0926370 | Msa1040520 | 0.817861 | 2.647459e-52 | -8.615850e-47 |
| Msa0926370 | Msa1045200 | 0.816369 | 5.728844e-52 | -8.615850e-47 |
| Msa0926370 | Msa1046280 | 0.812462 | 4.188835e-51 | -8.615850e-47 |
| Msa0926370 | Msa1075220 | -0.833724 | 4.523990e-56 | -8.615850e-47 |
| Msa0926370 | Msa1075650 | 0.800187 | 1.621025e-48 | -8.615850e-47 |
| Msa0926370 | Msa1079430 | 0.830837 | 2.344463e-55 | -8.615850e-47 |
| Msa0926370 | Msa1082500 | 0.833713 | 4.553347e-56 | -8.615850e-47 |
| Msa0926370 | Msa1083840 | 0.803629 | 3.181731e-49 | -8.615850e-47 |
| Msa0926370 | Msa1085300 | 0.805373 | 1.377254e-49 | -8.615850e-47 |
| Msa0926370 | Msa1087980 | 0.810446 | 1.148354e-50 | -8.615850e-47 |
| Msa0926370 | Msa1090260 | 0.810124 | 1.347213e-50 | -8.615850e-47 |
| Msa0926370 | Msa1098250 | 0.801208 | 1.003339e-48 | -8.615850e-47 |
| Msa0926370 | Msa1098270 | 0.814155 | 1.779406e-51 | -8.615850e-47 |
| Msa0926370 | Msa1099880 | 0.800374 | 1.485406e-48 | -8.615850e-47 |
| Msa0926370 | Msa1105500 | 0.809090 | 2.246490e-50 | -8.615850e-47 |
| Msa0926370 | Msa1116130 | -0.813308 | 2.733214e-51 | -8.615850e-47 |
| Msa0926370 | Msa1121490 | 0.825081 | 5.694643e-54 | -8.615850e-47 |
| Msa0926370 | Msa1122520 | 0.812945 | 3.284169e-51 | -8.615850e-47 |
| Msa0926370 | Msa1127770 | 0.821222 | 4.528204e-53 | -8.615850e-47 |
| Msa0926370 | Msa1133220 | 0.807848 | 4.135366e-50 | -8.615850e-47 |
| Msa0926370 | Msa1137570 | 0.826663 | 2.397027e-54 | -8.615850e-47 |
| Msa0926370 | Msa1139000 | -0.822404 | 2.412122e-53 | -8.615850e-47 |
| Msa0926370 | Msa1151910 | 0.813000 | 3.194359e-51 | -8.615850e-47 |
| Msa0926370 | Msa1158310 | 0.810673 | 1.025722e-50 | -8.615850e-47 |
| Msa0926370 | Msa1162550 | -0.838816 | 2.296448e-57 | -8.615850e-47 |
| Msa0926370 | Msa1188710 | 0.814179 | 1.758022e-51 | -8.615850e-47 |
| Msa0926370 | Msa1224480 | 0.817336 | 3.476595e-52 | -8.615850e-47 |
| Msa0926370 | Msa1272680 | 0.819354 | 1.213496e-52 | -8.615850e-47 |
| Msa0926370 | Msa1284680 | 0.827139 | 1.844903e-54 | -8.615850e-47 |
| Msa0926370 | Msa1297290 | 0.822918 | 1.831697e-53 | -8.615850e-47 |
| Msa0926370 | Msa1313150 | 0.815635 | 8.357684e-52 | -8.615850e-47 |
| Msa0926370 | Msa1319820 | 0.803572 | 3.270474e-49 | -8.615850e-47 |
| Msa0926370 | Msa1340650 | 0.823369 | 1.437603e-53 | -8.615850e-47 |
| Msa0926370 | Msa1353470 | 0.833942 | 3.991814e-56 | -8.615850e-47 |
| Msa0926370 | Msa1372150 | 0.812775 | 3.578018e-51 | -8.615850e-47 |
| Msa0926370 | Msa1377570 | 0.814302 | 1.651058e-51 | -8.615850e-47 |
| Msa0926370 | Msa1378940 | 0.800727 | 1.258578e-48 | -8.615850e-47 |
| Msa0926370 | Msa1379850 | 0.814736 | 1.323204e-51 | -8.615850e-47 |
| Msa0926370 | Msa1385000 | 0.822627 | 2.140844e-53 | -8.615850e-47 |
| Msa0926370 | Msa1392700 | 0.806543 | 7.818241e-50 | -8.615850e-47 |
| Msa0926370 | Msa1394380 | 0.800813 | 1.208436e-48 | -8.615850e-47 |
| Msa0926370 | Msa1396780 | 0.814531 | 1.469193e-51 | -8.615850e-47 |
| Msa0926370 | Msa1399140 | 0.831473 | 1.636175e-55 | -8.615850e-47 |
| Msa0926370 | Msa1410210 | 0.827828 | 1.260927e-54 | -8.615850e-47 |
| Msa0926370 | Msa1418260 | 0.815663 | 8.238915e-52 | -8.615850e-47 |
| Msa0926370 | Msa1421990 | 0.821545 | 3.813899e-53 | -8.615850e-47 |
| Msa0926370 | Msa1423880 | 0.822863 | 1.886967e-53 | -8.615850e-47 |
| Msa0926370 | Msa1424680 | 0.824874 | 6.373038e-54 | -8.615850e-47 |
| Msa0926370 | Msa1436480 | 0.814935 | 1.195405e-51 | -8.615850e-47 |
| Msa0926370 | Msa1440940 | 0.825437 | 4.690273e-54 | -8.615850e-47 |
| Msa0926370 | Msa1457430 | 0.820426 | 6.900918e-53 | -8.615850e-47 |
| Msa0926370 | Msa1463900 | 0.815682 | 8.156069e-52 | -8.615850e-47 |
| Msa0926370 | Msa1466540 | 0.810635 | 1.045056e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926370 | MtrunA17_Chr6g0486861 | 96.800 | 375 | 11 | 1 | 1 | 375 | 1 | 374 | 0.0 | 748 |
| Msa0926370 | MtrunA17_Chr8g0389881 | 68.766 | 381 | 107 | 7 | 1 | 375 | 1 | 375 | 0.0 | 508 |
| Msa0926370 | MtrunA17_Chr6g0486881 | 62.389 | 226 | 60 | 7 | 17 | 239 | 9 | 212 | 1.65e-81 | 248 |
| Msa0926370 | MtrunA17_Chr5g0405691 | 33.588 | 393 | 182 | 8 | 24 | 360 | 62 | 431 | 5.47e-62 | 206 |
| Msa0926370 | MtrunA17_Chr4g0037211 | 32.687 | 361 | 208 | 7 | 32 | 373 | 57 | 401 | 3.84e-59 | 197 |
| Msa0926370 | MtrunA17_Chr8g0371621 | 31.532 | 333 | 142 | 8 | 27 | 292 | 71 | 384 | 1.39e-37 | 140 |
| Msa0926370 | MtrunA17_Chr8g0361491 | 67.273 | 55 | 18 | 0 | 46 | 100 | 1 | 55 | 1.38e-20 | 84.3 |
| Msa0926370 | MtrunA17_Chr8g0371611 | 46.154 | 65 | 35 | 0 | 296 | 360 | 5 | 69 | 4.01e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926370 | AT4G15450.1 | 53.889 | 360 | 137 | 7 | 29 | 370 | 32 | 380 | 3.78e-132 | 383 |
| Msa0926370 | AT4G15450.2 | 52.778 | 360 | 135 | 8 | 29 | 370 | 32 | 374 | 1.37e-126 | 369 |
| Msa0926370 | AT3G21600.1 | 53.186 | 361 | 154 | 5 | 18 | 370 | 20 | 373 | 5.94e-125 | 365 |
| Msa0926370 | AT3G21600.2 | 54.545 | 341 | 142 | 4 | 18 | 352 | 20 | 353 | 1.37e-121 | 356 |
| Msa0926370 | AT3G21600.3 | 46.491 | 228 | 109 | 4 | 18 | 239 | 20 | 240 | 2.49e-65 | 209 |
| Msa0926370 | AT4G35985.1 | 32.771 | 415 | 201 | 9 | 17 | 374 | 55 | 448 | 5.34e-63 | 208 |
| Msa0926370 | AT3G51250.1 | 30.691 | 391 | 192 | 6 | 27 | 358 | 70 | 440 | 4.51e-59 | 198 |
| Msa0926370 | AT2G17840.1 | 32.593 | 405 | 191 | 12 | 11 | 360 | 54 | 431 | 8.18e-58 | 195 |
| Msa0926370 | AT4G35985.3 | 31.339 | 351 | 176 | 8 | 17 | 323 | 55 | 384 | 6.40e-48 | 167 |
| Msa0926370 | AT2G17840.2 | 30.163 | 368 | 175 | 12 | 11 | 323 | 54 | 394 | 9.97e-44 | 156 |
| Msa0926370 | AT3G51250.2 | 27.660 | 329 | 159 | 6 | 27 | 296 | 70 | 378 | 7.74e-39 | 142 |
| Msa0926370 | AT3G21590.3 | 43.210 | 162 | 74 | 4 | 168 | 323 | 69 | 218 | 4.95e-28 | 110 |
| Msa0926370 | AT4G35985.2 | 30.455 | 220 | 112 | 5 | 17 | 196 | 55 | 273 | 2.04e-26 | 108 |
| Msa0926370 | AT3G21590.1 | 39.130 | 138 | 66 | 4 | 168 | 299 | 69 | 194 | 9.19e-19 | 84.0 |
| Msa0926370 | AT3G21590.2 | 38.571 | 140 | 68 | 4 | 168 | 301 | 69 | 196 | 5.00e-18 | 82.4 |
Find 69 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTATCTGAAGGACTATTT+AGG | 0.231243 | 6_2:-69914785 | None:intergenic |
| TTCCATTGGTGGTAGGGTTT+TGG | 0.236710 | 6_2:-69913601 | None:intergenic |
| TTAGCAACAATCATCAAAAT+AGG | 0.264832 | 6_2:+69913795 | Msa0926370:CDS |
| AACACCATTGAGTAAAGATT+TGG | 0.276866 | 6_2:-69915156 | None:intergenic |
| ATTCATTCTGTTGTTCTTTG+TGG | 0.319852 | 6_2:-69914865 | None:intergenic |
| AGTCCTTCAGATAAGATAAA+TGG | 0.321082 | 6_2:+69914792 | Msa0926370:CDS |
| TTGAACACATTCTCTCTTGT+TGG | 0.326277 | 6_2:+69917113 | Msa0926370:three_prime_UTR |
| TTTCTTGCTAAGGCTATTGC+TGG | 0.337164 | 6_2:+69914080 | Msa0926370:CDS |
| AACCATTCTTGTTGCAGCTT+GGG | 0.343724 | 6_2:-69915820 | None:intergenic |
| AGAAGAAGAGTGATCTTGAT+TGG | 0.343736 | 6_2:+69914021 | Msa0926370:CDS |
| GAGAAATTTGGAGAAGCTAT+AGG | 0.362475 | 6_2:-69913633 | None:intergenic |
| CAACAAGAATGGTTTCTAAC+AGG | 0.380521 | 6_2:+69915829 | Msa0926370:CDS |
| AAAGACGGTTCAAAATCTTA+TGG | 0.390796 | 6_2:+69917027 | Msa0926370:three_prime_UTR |
| CCTCTCCTGGGAGCATCTTA+AGG | 0.391812 | 6_2:-69915238 | None:intergenic |
| AAGGCTATTGCTGGTGGAAC+TGG | 0.403743 | 6_2:+69914089 | Msa0926370:CDS |
| TATAGGTATGGGGAAGAAGC+AGG | 0.403987 | 6_2:+69916729 | Msa0926370:intron |
| GAAATTCTTATACAAATTCC+AGG | 0.407082 | 6_2:+69913681 | Msa0926370:CDS |
| GAAGCCAACAAGACCTCTCC+TGG | 0.411064 | 6_2:-69915251 | None:intergenic |
| TGCAGTAGAAGCTGGATTGA+TGG | 0.416271 | 6_2:-69916829 | None:intergenic |
| AGATTATCAACTTTCACAAC+TGG | 0.421713 | 6_2:-69913852 | None:intergenic |
| TAGTAATGCTTACACCAATC+AGG | 0.423191 | 6_2:+69914139 | Msa0926370:CDS |
| GTTGTATATCCAAACCTGAT+TGG | 0.424947 | 6_2:-69914153 | None:intergenic |
| GCTCCCAGGAGAGGTCTTGT+TGG | 0.427347 | 6_2:+69915247 | Msa0926370:CDS |
| TGGAACTGGTCAGATTGTTA+AGG | 0.427763 | 6_2:+69914103 | Msa0926370:CDS |
| AAAGTAACACCATAGCTTAG+AGG | 0.460022 | 6_2:-69913915 | None:intergenic |
| AGGATGTAAAGTGTATCTAA+TGG | 0.460051 | 6_2:+69913701 | Msa0926370:CDS |
| TTTGTATTTAACATAGATGA+AGG | 0.460543 | 6_2:+69916920 | Msa0926370:three_prime_UTR |
| AAACCATTCTTGTTGCAGCT+TGG | 0.465341 | 6_2:-69915821 | None:intergenic |
| AGTGTAGCTGCAGTAGAAGC+TGG | 0.473361 | 6_2:-69916837 | None:intergenic |
| CTTGCTAAGGCTATTGCTGG+TGG | 0.481145 | 6_2:+69914083 | Msa0926370:CDS |
| TTATCCAAATCTTTACTCAA+TGG | 0.483709 | 6_2:+69915152 | Msa0926370:CDS |
| ATAGGTATGGGGAAGAAGCA+GGG | 0.484548 | 6_2:+69916730 | Msa0926370:intron |
| GAAGAAGAGTGATCTTGATT+GGG | 0.488678 | 6_2:+69914022 | Msa0926370:CDS |
| AAATCTTTACTCAATGGTGT+TGG | 0.490241 | 6_2:+69915158 | Msa0926370:CDS |
| GGAACTGGTCAGATTGTTAA+GGG | 0.499722 | 6_2:+69914104 | Msa0926370:CDS |
| GCTTAAATCTCAACCAGGGC+AGG | 0.499904 | 6_2:+69915211 | Msa0926370:CDS |
| CTCCCAAGCTGCAACAAGAA+TGG | 0.503909 | 6_2:+69915818 | Msa0926370:CDS |
| ATTAGATACACTTTACATCC+TGG | 0.504957 | 6_2:-69913699 | None:intergenic |
| CTCCAAAACCCTACCACCAA+TGG | 0.509528 | 6_2:+69913599 | Msa0926370:CDS |
| TAGGTATGGGGAAGAAGCAG+GGG | 0.514222 | 6_2:+69916731 | Msa0926370:intron |
| GACATGCTGCTAATACTGCT+TGG | 0.519819 | 6_2:+69916784 | Msa0926370:CDS |
| TTTACTTACTGACTGCATCA+AGG | 0.520023 | 6_2:-69915274 | None:intergenic |
| ATCTTAAGGAATGCCTGCCC+TGG | 0.521001 | 6_2:-69915224 | None:intergenic |
| GAATGTCTCTAAGATAAGAA+AGG | 0.524168 | 6_2:+69916806 | Msa0926370:CDS |
| CCTGGTTGAGATTTAAGCAC+AGG | 0.526473 | 6_2:-69915206 | None:intergenic |
| CCACCATTTATCTTATCTGA+AGG | 0.528195 | 6_2:-69914795 | None:intergenic |
| CATTCTTGTTGCAGCTTGGG+AGG | 0.551842 | 6_2:-69915817 | None:intergenic |
| ATTTGGAGAAGCTATAGGAA+TGG | 0.551970 | 6_2:-69913628 | None:intergenic |
| CCTGTGCTTAAATCTCAACC+AGG | 0.555632 | 6_2:+69915206 | Msa0926370:CDS |
| CTTTCACAGGCAATGAAAAG+AGG | 0.557368 | 6_2:-69913881 | None:intergenic |
| GATAAGATAAATGGTGGCAA+TGG | 0.557596 | 6_2:+69914801 | Msa0926370:CDS |
| GGCTCATGACCATCTTTCAC+AGG | 0.561567 | 6_2:-69913894 | None:intergenic |
| AAAGTGTATCTAATGGATGA+AGG | 0.562070 | 6_2:+69913708 | Msa0926370:CDS |
| TTACTTACTGACTGCATCAA+GGG | 0.565912 | 6_2:-69915273 | None:intergenic |
| GAATGAATGAAAACCTCATA+CGG | 0.566239 | 6_2:+69914880 | Msa0926370:CDS |
| AAATACTTGTATAATTCTGA+AGG | 0.573146 | 6_2:-69916957 | None:intergenic |
| GGTCATGAGCCTCTAAGCTA+TGG | 0.578398 | 6_2:+69913906 | Msa0926370:CDS |
| ATTTAACATAGATGAAGGCA+TGG | 0.583122 | 6_2:+69916925 | Msa0926370:three_prime_UTR |
| GCATTCCTTAAGATGCTCCC+AGG | 0.593115 | 6_2:+69915233 | Msa0926370:CDS |
| CCTTAAGATGCTCCCAGGAG+AGG | 0.605060 | 6_2:+69915238 | Msa0926370:CDS |
| GATAAATGGTGGCAATGGCA+TGG | 0.606041 | 6_2:+69914806 | Msa0926370:CDS |
| GAGCATGTGTTTGCAACTGC+AGG | 0.619020 | 6_2:+69916762 | Msa0926370:CDS |
| AAGCCAACAAGACCTCTCCT+GGG | 0.622823 | 6_2:-69915250 | None:intergenic |
| CCTTCAGATAAGATAAATGG+TGG | 0.636170 | 6_2:+69914795 | Msa0926370:CDS |
| GTCTTGGTTATATAGGTATG+GGG | 0.638426 | 6_2:+69916719 | Msa0926370:intron |
| ATGCTACCAGAAAATTCATG+TGG | 0.664358 | 6_2:-69913939 | None:intergenic |
| AATGGTGTTGGAATAGTGAG+TGG | 0.664953 | 6_2:+69915170 | Msa0926370:CDS |
| CTGTGCTTAAATCTCAACCA+GGG | 0.724504 | 6_2:+69915207 | Msa0926370:CDS |
| GAAGCACATGAACTTACACA+AGG | 0.731250 | 6_2:+69913732 | Msa0926370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAATTAAAATTTCCT+AGG | - | chr6_2:69915874-69915893 | None:intergenic | 10.0% |
| !!! | TATTATTTATAAGTTTGTTA+AGG | + | chr6_2:69916166-69916185 | Msa0926370:intron | 10.0% |
| !!! | ATTACTTTTCAAACAAAAAT+AGG | - | chr6_2:69914700-69914719 | None:intergenic | 15.0% |
| !!! | TAATTTTGACAATCTTATAA+TGG | - | chr6_2:69915632-69915651 | None:intergenic | 15.0% |
| !!! | TATTTAACCTTTTTTAATGA+GGG | - | chr6_2:69916388-69916407 | None:intergenic | 15.0% |
| !!! | ATATTTAACCTTTTTTAATG+AGG | - | chr6_2:69916389-69916408 | None:intergenic | 15.0% |
| !!! | TTTTACTTTGACAATTTTTT+TGG | + | chr6_2:69916580-69916599 | Msa0926370:intron | 15.0% |
| !! | AAACACATAAAAAACAAACA+TGG | + | chr6_2:69913566-69913585 | Msa0926370:exon | 20.0% |
| !! | AACACATAAAAAACAAACAT+GGG | + | chr6_2:69913567-69913586 | Msa0926370:exon | 20.0% |
| !!! | TGATTATAATTTTCAACACT+TGG | - | chr6_2:69914059-69914078 | None:intergenic | 20.0% |
| !!! | TTATAATCATTTTCTTGCTA+AGG | + | chr6_2:69914070-69914089 | Msa0926370:CDS | 20.0% |
| !! | TTAGAACTTTATATGAAAAC+AGG | - | chr6_2:69914251-69914270 | None:intergenic | 20.0% |
| !!! | GTTGTTTTCATTAGATATTT+TGG | + | chr6_2:69914271-69914290 | Msa0926370:intron | 20.0% |
| !!! | GAAAATTACCATAAGTTTTA+AGG | + | chr6_2:69914314-69914333 | Msa0926370:intron | 20.0% |
| !! | TAGTATTTCCTTAAAACTTA+TGG | - | chr6_2:69914325-69914344 | None:intergenic | 20.0% |
| !!! | AAAACAAGAAAGTTTTAAGT+TGG | - | chr6_2:69914444-69914463 | None:intergenic | 20.0% |
| !! | GCTATTTGGTATAAAATTTA+GGG | - | chr6_2:69914502-69914521 | None:intergenic | 20.0% |
| !!! | TTAAAAGTTGTTTTGAAATC+AGG | + | chr6_2:69914740-69914759 | Msa0926370:intron | 20.0% |
| !! | TTACAATTTCAACTACTAAA+AGG | + | chr6_2:69915596-69915615 | Msa0926370:intron | 20.0% |
| !! | ACTAGATAATTGATTGATAT+TGG | - | chr6_2:69915672-69915691 | None:intergenic | 20.0% |
| !! | GTTAAAAATATAAGATAGAG+TGG | - | chr6_2:69915699-69915718 | None:intergenic | 20.0% |
| !! | AAAATTAAAATTTCCTAGGT+GGG | - | chr6_2:69915870-69915889 | None:intergenic | 20.0% |
| !! | AAAAATTAAAATTTCCTAGG+TGG | - | chr6_2:69915871-69915890 | None:intergenic | 20.0% |
| !! | TTTGCTACAATTAAAATTGA+GGG | - | chr6_2:69915969-69915988 | None:intergenic | 20.0% |
| !!! | GAGTTGTTTGATAATTATTT+TGG | + | chr6_2:69916070-69916089 | Msa0926370:intron | 20.0% |
| !!! | AAGTTTGTTAAGGTATTTTA+TGG | + | chr6_2:69916176-69916195 | Msa0926370:intron | 20.0% |
| !!! | TTTTTTACCCTCATTAAAAA+AGG | + | chr6_2:69916378-69916397 | Msa0926370:intron | 20.0% |
| !! | TAGTTGAGAAAAAATTAATG+TGG | - | chr6_2:69916623-69916642 | None:intergenic | 20.0% |
| !! | TTTGTATTTAACATAGATGA+AGG | + | chr6_2:69916920-69916939 | Msa0926370:three_prime_UTR | 20.0% |
| !! | AAATACTTGTATAATTCTGA+AGG | - | chr6_2:69916960-69916979 | None:intergenic | 20.0% |
| !!! | ATTATACAAGTATTTTGTGT+TGG | + | chr6_2:69916965-69916984 | Msa0926370:three_prime_UTR | 20.0% |
| !!! | ATTTTTCTTAAGTCATCTTA+TGG | - | chr6_2:69916995-69917014 | None:intergenic | 20.0% |
| !!! | TTTGGTTTTGTTGAGAAATT+TGG | - | chr6_2:69913648-69913667 | None:intergenic | 25.0% |
| !! | ATTTCTTGTCTAAGAGTTTT+TGG | - | chr6_2:69913666-69913685 | None:intergenic | 25.0% |
| ! | GAAATTCTTATACAAATTCC+AGG | + | chr6_2:69913681-69913700 | Msa0926370:CDS | 25.0% |
| ! | TTAGCAACAATCATCAAAAT+AGG | + | chr6_2:69913795-69913814 | Msa0926370:CDS | 25.0% |
| !! | TTTGGTTGAATCTTTTCTTA+AGG | + | chr6_2:69913965-69913984 | Msa0926370:CDS | 25.0% |
| ! | ACTATATTTGCTTCTTTAAC+CGG | - | chr6_2:69914366-69914385 | None:intergenic | 25.0% |
| ! | CAAATATAGTAGTATTGTGT+TGG | + | chr6_2:69914376-69914395 | Msa0926370:intron | 25.0% |
| ! | GGCTATTTGGTATAAAATTT+AGG | - | chr6_2:69914503-69914522 | None:intergenic | 25.0% |
| !!! | TTTTAGCTCAATCTAAAAGT+TGG | - | chr6_2:69914524-69914543 | None:intergenic | 25.0% |
| !! | CTTTTAGATTGAGCTAAAAA+TGG | + | chr6_2:69914525-69914544 | Msa0926370:intron | 25.0% |
| !!! | TTTTGAAATCAGGTTCAAAA+AGG | + | chr6_2:69914750-69914769 | Msa0926370:intron | 25.0% |
| ! | AGATAGATATGATTAAAGTC+AGG | - | chr6_2:69914968-69914987 | None:intergenic | 25.0% |
| !! | CATAGTAAAACTTTTTACAC+CGG | - | chr6_2:69915026-69915045 | None:intergenic | 25.0% |
| ! | TTATCCAAATCTTTACTCAA+TGG | + | chr6_2:69915152-69915171 | Msa0926370:CDS | 25.0% |
| ! | AATTAAAGTACGTCAATCAA+AGG | + | chr6_2:69915556-69915575 | Msa0926370:intron | 25.0% |
| ! | GTAGTTGAAATTGTAAAAGT+CGG | - | chr6_2:69915592-69915611 | None:intergenic | 25.0% |
| !! | TGAATTTTACCCTTAATGTT+TGG | + | chr6_2:69915895-69915914 | Msa0926370:intron | 25.0% |
| ! | ATATGTAAGCCAAACATTAA+GGG | - | chr6_2:69915907-69915926 | None:intergenic | 25.0% |
| ! | TATATGTAAGCCAAACATTA+AGG | - | chr6_2:69915908-69915927 | None:intergenic | 25.0% |
| !! | GTTTGCTACAATTAAAATTG+AGG | - | chr6_2:69915970-69915989 | None:intergenic | 25.0% |
| !! | CTAATATTTGCTTGCATTTT+TGG | - | chr6_2:69916874-69916893 | None:intergenic | 25.0% |
| ! | AATCAACTTGATGAAAAAGA+CGG | + | chr6_2:69917012-69917031 | Msa0926370:three_prime_UTR | 25.0% |
| !! | TGTAGAATTCCTTTTCAAAA+TGG | - | chr6_2:69917160-69917179 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAGGAATTCTACA+TGG | + | chr6_2:69917160-69917179 | Msa0926370:three_prime_UTR | 25.0% |
| !!! | ATAGGAATGGTTTTTTCCAT+TGG | - | chr6_2:69913618-69913637 | None:intergenic | 30.0% |
| ATTAGATACACTTTACATCC+TGG | - | chr6_2:69913702-69913721 | None:intergenic | 30.0% | |
| AGGATGTAAAGTGTATCTAA+TGG | + | chr6_2:69913701-69913720 | Msa0926370:CDS | 30.0% | |
| ! | AAAGTGTATCTAATGGATGA+AGG | + | chr6_2:69913708-69913727 | Msa0926370:CDS | 30.0% |
| !! | ACTGGTTCATCTTTTGTTAA+AGG | - | chr6_2:69913837-69913856 | None:intergenic | 30.0% |
| AGATTATCAACTTTCACAAC+TGG | - | chr6_2:69913855-69913874 | None:intergenic | 30.0% | |
| ! | ACTTTTCCACATGAATTTTC+TGG | + | chr6_2:69913933-69913952 | Msa0926370:CDS | 30.0% |
| TTCTTTAGCCAGTAAAACAT+CGG | + | chr6_2:69914467-69914486 | Msa0926370:intron | 30.0% | |
| CAATCTAAAAGTTGGCTATT+TGG | - | chr6_2:69914516-69914535 | None:intergenic | 30.0% | |
| TCTTATCTGAAGGACTATTT+AGG | - | chr6_2:69914788-69914807 | None:intergenic | 30.0% | |
| AGTCCTTCAGATAAGATAAA+TGG | + | chr6_2:69914792-69914811 | Msa0926370:CDS | 30.0% | |
| ATTCATTCTGTTGTTCTTTG+TGG | - | chr6_2:69914868-69914887 | None:intergenic | 30.0% | |
| GAATGAATGAAAACCTCATA+CGG | + | chr6_2:69914880-69914899 | Msa0926370:CDS | 30.0% | |
| !! | GTATTTTTGAATACCGTATG+AGG | - | chr6_2:69914896-69914915 | None:intergenic | 30.0% |
| AACACCATTGAGTAAAGATT+TGG | - | chr6_2:69915159-69915178 | None:intergenic | 30.0% | |
| AAATCTTTACTCAATGGTGT+TGG | + | chr6_2:69915158-69915177 | Msa0926370:CDS | 30.0% | |
| !! | TACTCTAAGATCTTCAACTT+TGG | - | chr6_2:69915315-69915334 | None:intergenic | 30.0% |
| !!! | AACCACGATTTGTTTTAAGT+CGG | + | chr6_2:69915454-69915473 | Msa0926370:intron | 30.0% |
| AATCAAATAGAAGACTGAAC+AGG | - | chr6_2:69915516-69915535 | None:intergenic | 30.0% | |
| CAATTTCAACTACTAAAAGG+TGG | + | chr6_2:69915599-69915618 | Msa0926370:intron | 30.0% | |
| ! | ATCTTTTAATGTCACAGACA+AGG | + | chr6_2:69915749-69915768 | Msa0926370:intron | 30.0% |
| CACTATAAGTTGTGGTTAAA+AGG | - | chr6_2:69916016-69916035 | None:intergenic | 30.0% | |
| ! | CTTTTAACCACAACTTATAG+TGG | + | chr6_2:69916014-69916033 | Msa0926370:intron | 30.0% |
| AAGTTATCCACTATAAGTTG+TGG | - | chr6_2:69916024-69916043 | None:intergenic | 30.0% | |
| !!! | CTATTTTGATTAAGCTGGAT+AGG | - | chr6_2:69916051-69916070 | None:intergenic | 30.0% |
| !!! | CAACTCTATTTTGATTAAGC+TGG | - | chr6_2:69916056-69916075 | None:intergenic | 30.0% |
| !!! | TTGATAATTATTTTGGCGCA+CGG | + | chr6_2:69916077-69916096 | Msa0926370:intron | 30.0% |
| CTAAACTAAGCTAATCGAAA+CGG | - | chr6_2:69916104-69916123 | None:intergenic | 30.0% | |
| !! | CAGGTTGAATTTTAAGTGTT+TGG | - | chr6_2:69916475-69916494 | None:intergenic | 30.0% |
| CTGATAATTGATAAACTAGC+AGG | - | chr6_2:69916494-69916513 | None:intergenic | 30.0% | |
| AGTGTATGTCTTGGTTATAT+AGG | + | chr6_2:69916712-69916731 | Msa0926370:intron | 30.0% | |
| ATGTCTTGGTTATATAGGTA+TGG | + | chr6_2:69916717-69916736 | Msa0926370:intron | 30.0% | |
| TGTCTTGGTTATATAGGTAT+GGG | + | chr6_2:69916718-69916737 | Msa0926370:intron | 30.0% | |
| !! | GAATGTCTCTAAGATAAGAA+AGG | + | chr6_2:69916806-69916825 | Msa0926370:CDS | 30.0% |
| ATTTAACATAGATGAAGGCA+TGG | + | chr6_2:69916925-69916944 | Msa0926370:three_prime_UTR | 30.0% | |
| AAAGACGGTTCAAAATCTTA+TGG | + | chr6_2:69917027-69917046 | Msa0926370:three_prime_UTR | 30.0% | |
| !! | TAAATCCCACCATTTTGAAA+AGG | + | chr6_2:69917148-69917167 | Msa0926370:three_prime_UTR | 30.0% |
| ! | GAATTCCTTTTCAAAATGGT+GGG | - | chr6_2:69917156-69917175 | None:intergenic | 30.0% |
| ! | AGAATTCCTTTTCAAAATGG+TGG | - | chr6_2:69917157-69917176 | None:intergenic | 30.0% |
| ATTTGGAGAAGCTATAGGAA+TGG | - | chr6_2:69913631-69913650 | None:intergenic | 35.0% | |
| GAGAAATTTGGAGAAGCTAT+AGG | - | chr6_2:69913636-69913655 | None:intergenic | 35.0% | |
| ! | TTTTCATTGCCTGTGAAAGA+TGG | + | chr6_2:69913885-69913904 | Msa0926370:CDS | 35.0% |
| AAAGTAACACCATAGCTTAG+AGG | - | chr6_2:69913918-69913937 | None:intergenic | 35.0% | |
| ATGCTACCAGAAAATTCATG+TGG | - | chr6_2:69913942-69913961 | None:intergenic | 35.0% | |
| !! | ACATGAATTTTCTGGTAGCA+TGG | + | chr6_2:69913941-69913960 | Msa0926370:CDS | 35.0% |
| AGAAGAAGAGTGATCTTGAT+TGG | + | chr6_2:69914021-69914040 | Msa0926370:CDS | 35.0% | |
| GAAGAAGAGTGATCTTGATT+GGG | + | chr6_2:69914022-69914041 | Msa0926370:CDS | 35.0% | |
| TAGTAATGCTTACACCAATC+AGG | + | chr6_2:69914139-69914158 | Msa0926370:CDS | 35.0% | |
| GTTGTATATCCAAACCTGAT+TGG | - | chr6_2:69914156-69914175 | None:intergenic | 35.0% | |
| !! | GATGTTTTACTGGCTAAAGA+AGG | - | chr6_2:69914468-69914487 | None:intergenic | 35.0% |
| ! | TATGCTAACCGATGTTTTAC+TGG | - | chr6_2:69914478-69914497 | None:intergenic | 35.0% |
| !! | TCATTTTGATCAAGTGATCG+TGG | - | chr6_2:69914568-69914587 | None:intergenic | 35.0% |
| AAAAGTCATGCAGTTTCATG+CGG | - | chr6_2:69914672-69914691 | None:intergenic | 35.0% | |
| TGAAATCAGGTTCAAAAAGG+AGG | + | chr6_2:69914753-69914772 | Msa0926370:intron | 35.0% | |
| CCACCATTTATCTTATCTGA+AGG | - | chr6_2:69914798-69914817 | None:intergenic | 35.0% | |
| CCTTCAGATAAGATAAATGG+TGG | + | chr6_2:69914795-69914814 | Msa0926370:CDS | 35.0% | |
| GATAAGATAAATGGTGGCAA+TGG | + | chr6_2:69914801-69914820 | Msa0926370:CDS | 35.0% | |
| TGAGACAGTGTAAAATAGTC+AGG | - | chr6_2:69914918-69914937 | None:intergenic | 35.0% | |
| CTGAAAAGTCATACGAATGA+TGG | + | chr6_2:69914986-69915005 | Msa0926370:intron | 35.0% | |
| ! | GATGGTTTGTAAATGATTGC+CGG | + | chr6_2:69915004-69915023 | Msa0926370:intron | 35.0% |
| ! | TTACTTACTGACTGCATCAA+GGG | - | chr6_2:69915276-69915295 | None:intergenic | 35.0% |
| ! | TTTACTTACTGACTGCATCA+AGG | - | chr6_2:69915277-69915296 | None:intergenic | 35.0% |
| !!! | TTGTTTTAAGTCGGTGACAA+CGG | + | chr6_2:69915463-69915482 | Msa0926370:intron | 35.0% |
| CAACAAGAATGGTTTCTAAC+AGG | + | chr6_2:69915829-69915848 | Msa0926370:CDS | 35.0% | |
| TAAGAGATAAGCCACCTTAT+GGG | - | chr6_2:69916550-69916569 | None:intergenic | 35.0% | |
| GACATACACTCTTGTTAAGT+TGG | - | chr6_2:69916702-69916721 | None:intergenic | 35.0% | |
| ! | CTTAACAAGAGTGTATGTCT+TGG | + | chr6_2:69916703-69916722 | Msa0926370:intron | 35.0% |
| GTCTTGGTTATATAGGTATG+GGG | + | chr6_2:69916719-69916738 | Msa0926370:intron | 35.0% | |
| TTGAACACATTCTCTCTTGT+TGG | + | chr6_2:69917113-69917132 | Msa0926370:three_prime_UTR | 35.0% | |
| !!! | GGTTTTTTCCATTGGTGGTA+GGG | - | chr6_2:69913610-69913629 | None:intergenic | 40.0% |
| !!! | TGGTTTTTTCCATTGGTGGT+AGG | - | chr6_2:69913611-69913630 | None:intergenic | 40.0% |
| !!! | GGAATGGTTTTTTCCATTGG+TGG | - | chr6_2:69913615-69913634 | None:intergenic | 40.0% |
| GAAGCACATGAACTTACACA+AGG | + | chr6_2:69913732-69913751 | Msa0926370:CDS | 40.0% | |
| CTTTCACAGGCAATGAAAAG+AGG | - | chr6_2:69913884-69913903 | None:intergenic | 40.0% | |
| !! | ATTTTCTGGTAGCATGGCTT+TGG | + | chr6_2:69913947-69913966 | Msa0926370:CDS | 40.0% |
| TTTCTTGCTAAGGCTATTGC+TGG | + | chr6_2:69914080-69914099 | Msa0926370:CDS | 40.0% | |
| TGGAACTGGTCAGATTGTTA+AGG | + | chr6_2:69914103-69914122 | Msa0926370:CDS | 40.0% | |
| GGAACTGGTCAGATTGTTAA+GGG | + | chr6_2:69914104-69914123 | Msa0926370:CDS | 40.0% | |
| ATGCTTACACCAATCAGGTT+TGG | + | chr6_2:69914144-69914163 | Msa0926370:intron | 40.0% | |
| ! | AATGGTGTTGGAATAGTGAG+TGG | + | chr6_2:69915170-69915189 | Msa0926370:CDS | 40.0% |
| CTGTGCTTAAATCTCAACCA+GGG | + | chr6_2:69915207-69915226 | Msa0926370:CDS | 40.0% | |
| TAGTGTTTACAGAACCTGAC+CGG | + | chr6_2:69915386-69915405 | Msa0926370:intron | 40.0% | |
| ! | TGGTCGGTTCAATTAGGAAT+CGG | + | chr6_2:69915411-69915430 | Msa0926370:intron | 40.0% |
| !! | CACCGACTTAAAACAAATCG+TGG | - | chr6_2:69915459-69915478 | None:intergenic | 40.0% |
| AACCATTCTTGTTGCAGCTT+GGG | - | chr6_2:69915823-69915842 | None:intergenic | 40.0% | |
| AAACCATTCTTGTTGCAGCT+TGG | - | chr6_2:69915824-69915843 | None:intergenic | 40.0% | |
| AAGAGATAAGCCACCTTATG+GGG | - | chr6_2:69916549-69916568 | None:intergenic | 40.0% | |
| CTAAGAGATAAGCCACCTTA+TGG | - | chr6_2:69916551-69916570 | None:intergenic | 40.0% | |
| !! | TTCCATTGGTGGTAGGGTTT+TGG | - | chr6_2:69913604-69913623 | None:intergenic | 45.0% |
| AAATACTAACCAATGCCCGC+AGG | + | chr6_2:69914337-69914356 | Msa0926370:intron | 45.0% | |
| AATACTAACCAATGCCCGCA+GGG | + | chr6_2:69914338-69914357 | Msa0926370:intron | 45.0% | |
| GATAAATGGTGGCAATGGCA+TGG | + | chr6_2:69914806-69914825 | Msa0926370:CDS | 45.0% | |
| CCTGGTTGAGATTTAAGCAC+AGG | - | chr6_2:69915209-69915228 | None:intergenic | 45.0% | |
| CCTGTGCTTAAATCTCAACC+AGG | + | chr6_2:69915206-69915225 | Msa0926370:CDS | 45.0% | |
| GAACAGCGATTCAACCTAGA+TGG | + | chr6_2:69915485-69915504 | Msa0926370:intron | 45.0% | |
| ! | CTGAACAGGTTGAACCATCT+AGG | - | chr6_2:69915502-69915521 | None:intergenic | 45.0% |
| !!! | CAAGGTTTTTGAAGCAGCAG+AGG | + | chr6_2:69915767-69915786 | Msa0926370:CDS | 45.0% |
| AAAACCACTACATCCCACCT+AGG | + | chr6_2:69915854-69915873 | Msa0926370:intron | 45.0% | |
| ATTTCCTAGGTGGGATGTAG+TGG | - | chr6_2:69915861-69915880 | None:intergenic | 45.0% | |
| TTGTAAGCCCATTCCCCATA+AGG | + | chr6_2:69916533-69916552 | Msa0926370:intron | 45.0% | |
| TAAGCCACCTTATGGGGAAT+GGG | - | chr6_2:69916543-69916562 | None:intergenic | 45.0% | |
| ATAAGCCACCTTATGGGGAA+TGG | - | chr6_2:69916544-69916563 | None:intergenic | 45.0% | |
| TATAGGTATGGGGAAGAAGC+AGG | + | chr6_2:69916729-69916748 | Msa0926370:intron | 45.0% | |
| ATAGGTATGGGGAAGAAGCA+GGG | + | chr6_2:69916730-69916749 | Msa0926370:intron | 45.0% | |
| GACATGCTGCTAATACTGCT+TGG | + | chr6_2:69916784-69916803 | Msa0926370:CDS | 45.0% | |
| TGCAGTAGAAGCTGGATTGA+TGG | - | chr6_2:69916832-69916851 | None:intergenic | 45.0% | |
| CTCCAAAACCCTACCACCAA+TGG | + | chr6_2:69913599-69913618 | Msa0926370:CDS | 50.0% | |
| GGCTCATGACCATCTTTCAC+AGG | - | chr6_2:69913897-69913916 | None:intergenic | 50.0% | |
| GGTCATGAGCCTCTAAGCTA+TGG | + | chr6_2:69913906-69913925 | Msa0926370:CDS | 50.0% | |
| CTTGCTAAGGCTATTGCTGG+TGG | + | chr6_2:69914083-69914102 | Msa0926370:CDS | 50.0% | |
| AAGGCTATTGCTGGTGGAAC+TGG | + | chr6_2:69914089-69914108 | Msa0926370:CDS | 50.0% | |
| GCTTAAATCTCAACCAGGGC+AGG | + | chr6_2:69915211-69915230 | Msa0926370:CDS | 50.0% | |
| ATCTTAAGGAATGCCTGCCC+TGG | - | chr6_2:69915227-69915246 | None:intergenic | 50.0% | |
| GCATTCCTTAAGATGCTCCC+AGG | + | chr6_2:69915233-69915252 | Msa0926370:CDS | 50.0% | |
| AAGCCAACAAGACCTCTCCT+GGG | - | chr6_2:69915253-69915272 | None:intergenic | 50.0% | |
| TTTACAGAACCTGACCGGAC+TGG | + | chr6_2:69915391-69915410 | Msa0926370:intron | 50.0% | |
| CCTAATTGAACCGACCAGTC+CGG | - | chr6_2:69915408-69915427 | None:intergenic | 50.0% | |
| CATTCTTGTTGCAGCTTGGG+AGG | - | chr6_2:69915820-69915839 | None:intergenic | 50.0% | |
| CTCCCAAGCTGCAACAAGAA+TGG | + | chr6_2:69915818-69915837 | Msa0926370:CDS | 50.0% | |
| TAAGCCCATTCCCCATAAGG+TGG | + | chr6_2:69916536-69916555 | Msa0926370:intron | 50.0% | |
| TAGGTATGGGGAAGAAGCAG+GGG | + | chr6_2:69916731-69916750 | Msa0926370:intron | 50.0% | |
| GAGCATGTGTTTGCAACTGC+AGG | + | chr6_2:69916762-69916781 | Msa0926370:CDS | 50.0% | |
| AGTGTAGCTGCAGTAGAAGC+TGG | - | chr6_2:69916840-69916859 | None:intergenic | 50.0% | |
| TTCTTTAACCGGTGCCCTGC+GGG | - | chr6_2:69914355-69914374 | None:intergenic | 55.0% | |
| CTTCTTTAACCGGTGCCCTG+CGG | - | chr6_2:69914356-69914375 | None:intergenic | 55.0% | |
| !! | CCTCTCCTGGGAGCATCTTA+AGG | - | chr6_2:69915241-69915260 | None:intergenic | 55.0% |
| CCTTAAGATGCTCCCAGGAG+AGG | + | chr6_2:69915238-69915257 | Msa0926370:CDS | 55.0% | |
| GAAGCCAACAAGACCTCTCC+TGG | - | chr6_2:69915254-69915273 | None:intergenic | 55.0% | |
| !! | CCGGACTGGTCGGTTCAATT+AGG | + | chr6_2:69915405-69915424 | Msa0926370:intron | 55.0% |
| ! | GCTCCCAGGAGAGGTCTTGT+TGG | + | chr6_2:69915247-69915266 | Msa0926370:CDS | 60.0% |
| !! | CAGAACCTGACCGGACTGGT+CGG | + | chr6_2:69915395-69915414 | Msa0926370:intron | 60.0% |
| TTGAACCGACCAGTCCGGTC+AGG | - | chr6_2:69915403-69915422 | None:intergenic | 60.0% | |
| AACCAATGCCCGCAGGGCAC+CGG | + | chr6_2:69914344-69914363 | Msa0926370:intron | 65.0% | |
| AACCGGTGCCCTGCGGGCAT+TGG | - | chr6_2:69914349-69914368 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 69913562 | 69917184 | 69913562 | ID=Msa0926370;Name=Msa0926370 |
| chr6_2 | mRNA | 69913562 | 69917184 | 69913562 | ID=Msa0926370-mRNA-1;Parent=Msa0926370;Name=Msa0926370-mRNA-1;_AED=0.11;_eAED=0.11;_QI=23|1|0.8|1|1|1|5|291|375 |
| chr6_2 | exon | 69913562 | 69914160 | 69913562 | ID=Msa0926370-mRNA-1:exon:11436;Parent=Msa0926370-mRNA-1 |
| chr6_2 | exon | 69914762 | 69914901 | 69914762 | ID=Msa0926370-mRNA-1:exon:11437;Parent=Msa0926370-mRNA-1 |
| chr6_2 | exon | 69915121 | 69915287 | 69915121 | ID=Msa0926370-mRNA-1:exon:11438;Parent=Msa0926370-mRNA-1 |
| chr6_2 | exon | 69915766 | 69915850 | 69915766 | ID=Msa0926370-mRNA-1:exon:11439;Parent=Msa0926370-mRNA-1 |
| chr6_2 | exon | 69916734 | 69917184 | 69916734 | ID=Msa0926370-mRNA-1:exon:11440;Parent=Msa0926370-mRNA-1 |
| chr6_2 | five_prime_UTR | 69913562 | 69913584 | 69913562 | ID=Msa0926370-mRNA-1:five_prime_utr;Parent=Msa0926370-mRNA-1 |
| chr6_2 | CDS | 69913585 | 69914160 | 69913585 | ID=Msa0926370-mRNA-1:cds;Parent=Msa0926370-mRNA-1 |
| chr6_2 | CDS | 69914762 | 69914901 | 69914762 | ID=Msa0926370-mRNA-1:cds;Parent=Msa0926370-mRNA-1 |
| chr6_2 | CDS | 69915121 | 69915287 | 69915121 | ID=Msa0926370-mRNA-1:cds;Parent=Msa0926370-mRNA-1 |
| chr6_2 | CDS | 69915766 | 69915850 | 69915766 | ID=Msa0926370-mRNA-1:cds;Parent=Msa0926370-mRNA-1 |
| chr6_2 | CDS | 69916734 | 69916893 | 69916734 | ID=Msa0926370-mRNA-1:cds;Parent=Msa0926370-mRNA-1 |
| chr6_2 | three_prime_UTR | 69916894 | 69917184 | 69916894 | ID=Msa0926370-mRNA-1:three_prime_utr;Parent=Msa0926370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
