Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974710 | XP_003618525.2 | 92.958 | 71 | 5 | 0 | 2 | 72 | 1 | 71 | 2.73e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974710 | G7KKX2 | 92.958 | 71 | 5 | 0 | 2 | 72 | 1 | 71 | 1.30e-31 | 115 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0060690 | Msa0974710 | 0.806536 | 7.843799e-50 | -8.615850e-47 |
| Msa0090380 | Msa0974710 | 0.802528 | 5.376425e-49 | -8.615850e-47 |
| Msa0097570 | Msa0974710 | 0.801602 | 8.333397e-49 | -8.615850e-47 |
| Msa0105440 | Msa0974710 | 0.810332 | 1.215077e-50 | -8.615850e-47 |
| Msa0667030 | Msa0974710 | 0.824178 | 9.292566e-54 | -8.615850e-47 |
| Msa0682110 | Msa0974710 | 0.827449 | 1.555237e-54 | -8.615850e-47 |
| Msa0682160 | Msa0974710 | 0.812084 | 5.065703e-51 | -8.615850e-47 |
| Msa0712880 | Msa0974710 | 0.818769 | 1.648824e-52 | -8.615850e-47 |
| Msa0736920 | Msa0974710 | 0.807510 | 4.879778e-50 | -8.615850e-47 |
| Msa0744640 | Msa0974710 | 0.836391 | 9.619477e-57 | -8.615850e-47 |
| Msa0778570 | Msa0974710 | 0.811673 | 6.224205e-51 | -8.615850e-47 |
| Msa0795860 | Msa0974710 | 0.828556 | 8.420201e-55 | -8.615850e-47 |
| Msa0810330 | Msa0974710 | 0.818155 | 2.271294e-52 | -8.615850e-47 |
| Msa0815940 | Msa0974710 | 0.800990 | 1.112236e-48 | -8.615850e-47 |
| Msa0833640 | Msa0974710 | 0.813568 | 2.396140e-51 | -8.615850e-47 |
| Msa0841730 | Msa0974710 | 0.835029 | 2.127783e-56 | -8.615850e-47 |
| Msa0151510 | Msa0974710 | -0.803869 | 2.837795e-49 | -8.615850e-47 |
| Msa0210610 | Msa0974710 | 0.819032 | 1.436569e-52 | -8.615850e-47 |
| Msa0226260 | Msa0974710 | 0.820752 | 5.810450e-53 | -8.615850e-47 |
| Msa0389080 | Msa0974710 | -0.822626 | 2.142026e-53 | -8.615850e-47 |
| Msa0405470 | Msa0974710 | -0.803549 | 3.306823e-49 | -8.615850e-47 |
| Msa0405550 | Msa0974710 | -0.808786 | 2.609460e-50 | -8.615850e-47 |
| Msa0293720 | Msa0974710 | 0.818583 | 1.817504e-52 | -8.615850e-47 |
| Msa0304730 | Msa0974710 | 0.807853 | 4.125289e-50 | -8.615850e-47 |
| Msa0320170 | Msa0974710 | 0.810052 | 1.396400e-50 | -8.615850e-47 |
| Msa0345050 | Msa0974710 | 0.816308 | 5.913803e-52 | -8.615850e-47 |
| Msa0483970 | Msa0974710 | -0.802212 | 6.243591e-49 | -8.615850e-47 |
| Msa0531050 | Msa0974710 | 0.822414 | 2.399309e-53 | -8.615850e-47 |
| Msa0532230 | Msa0974710 | 0.824806 | 6.610382e-54 | -8.615850e-47 |
| Msa0535400 | Msa0974710 | 0.801995 | 6.919202e-49 | -8.615850e-47 |
| Msa0870510 | Msa0974710 | 0.869264 | 3.528256e-66 | -8.615850e-47 |
| Msa0873910 | Msa0974710 | 0.815459 | 9.145555e-52 | -8.615850e-47 |
| Msa0905570 | Msa0974710 | 0.878012 | 3.961149e-69 | -8.615850e-47 |
| Msa0906660 | Msa0974710 | 0.800671 | 1.292135e-48 | -8.615850e-47 |
| Msa0946110 | Msa0974710 | 0.810853 | 9.375963e-51 | -8.615850e-47 |
| Msa0946330 | Msa0974710 | 0.806784 | 6.952289e-50 | -8.615850e-47 |
| Msa0974710 | Msa0975960 | 0.820732 | 5.872626e-53 | -8.615850e-47 |
| Msa0974710 | Msa1032480 | 0.800686 | 1.282929e-48 | -8.615850e-47 |
| Msa0974710 | Msa1080130 | 0.813670 | 2.275659e-51 | -8.615850e-47 |
| Msa0974710 | Msa1086490 | -0.814536 | 1.465333e-51 | -8.615850e-47 |
| Msa0974710 | Msa1092310 | 0.810943 | 8.962632e-51 | -8.615850e-47 |
| Msa0974710 | Msa1129120 | -0.802303 | 5.980623e-49 | -8.615850e-47 |
| Msa0974710 | Msa1136760 | 0.801296 | 9.626922e-49 | -8.615850e-47 |
| Msa0974710 | Msa1159170 | 0.802737 | 4.867776e-49 | -8.615850e-47 |
| Msa0974710 | Msa1167310 | 0.843596 | 1.271229e-58 | -8.615850e-47 |
| Msa0974710 | Msa1173150 | 0.801188 | 1.013042e-48 | -8.615850e-47 |
| Msa0974710 | Msa1187480 | 0.833826 | 4.265719e-56 | -8.615850e-47 |
| Msa0974710 | Msa1202110 | 0.815135 | 1.079782e-51 | -8.615850e-47 |
| Msa0974710 | Msa1202470 | 0.802187 | 6.319337e-49 | -8.615850e-47 |
| Msa0974710 | Msa1202800 | 0.840877 | 6.671181e-58 | -8.615850e-47 |
| Msa0974710 | Msa1238190 | 0.811085 | 8.353019e-51 | -8.615850e-47 |
| Msa0974710 | Msa1238600 | 0.838070 | 3.578052e-57 | -8.615850e-47 |
| Msa0974710 | Msa1254870 | 0.811520 | 6.719702e-51 | -8.615850e-47 |
| Msa0974710 | Msa1254910 | 0.810980 | 8.801992e-51 | -8.615850e-47 |
| Msa0974710 | Msa1255210 | 0.836737 | 7.852311e-57 | -8.615850e-47 |
| Msa0974710 | Msa1273620 | -0.819906 | 9.081006e-53 | -8.615850e-47 |
| Msa0974710 | Msa1289050 | 0.807544 | 4.798551e-50 | -8.615850e-47 |
| Msa0974710 | Msa1289090 | 0.805046 | 1.612501e-49 | -8.615850e-47 |
| Msa0974710 | Msa1295650 | 0.833818 | 4.285125e-56 | -8.615850e-47 |
| Msa0974710 | Msa1311600 | -0.818246 | 2.166858e-52 | -8.615850e-47 |
| Msa0974710 | Msa1323010 | 0.807441 | 5.046829e-50 | -8.615850e-47 |
| Msa0974710 | Msa1328430 | 0.811281 | 7.572057e-51 | -8.615850e-47 |
| Msa0974710 | Msa1343600 | 0.810179 | 1.310731e-50 | -8.615850e-47 |
| Msa0974710 | Msa1404050 | 0.801099 | 1.056603e-48 | -8.615850e-47 |
| Msa0974710 | Msa1433410 | 0.802840 | 4.635524e-49 | -8.615850e-47 |
| Msa0974710 | Msa1443620 | 0.802676 | 5.010175e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974710 | MtrunA17_Chr6g0453441 | 92.958 | 71 | 5 | 0 | 2 | 72 | 1 | 71 | 2.51e-35 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974710 | AT3G29034.1 | 41.176 | 85 | 38 | 2 | 1 | 73 | 1 | 85 | 4.08e-15 | 64.7 |
Find 15 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTTCTGATTGGATTAAT+TGG | 0.161988 | 6_4:-7964970 | Msa0974710:CDS |
| GCAATCCCAACATGAGAATA+AGG | 0.311986 | 6_4:+7964878 | None:intergenic |
| TCCGAAAAGACAACATCTTT+TGG | 0.326165 | 6_4:-7959748 | Msa0974710:CDS |
| GGTCTCCTTATTCTCATGTT+GGG | 0.337452 | 6_4:-7964883 | Msa0974710:CDS |
| GGTTTGTGAGTAAGCAAATA+AGG | 0.351967 | 6_4:+7964936 | None:intergenic |
| CTCATGTTGGGATTGCTTGT+AGG | 0.397106 | 6_4:-7964871 | Msa0974710:CDS |
| AACACAAAAGCACTTCTGAT+TGG | 0.397640 | 6_4:-7964979 | Msa0974710:CDS |
| TGGTCTCCTTATTCTCATGT+TGG | 0.454557 | 6_4:-7964884 | Msa0974710:CDS |
| GTCAAACACTTCAAAGCCAT+TGG | 0.464745 | 6_4:-7959774 | Msa0974710:CDS |
| GCATTTATGAGTACTGCATC+TGG | 0.476750 | 6_4:-7959796 | Msa0974710:CDS |
| GCTTTGACTTGGTGATATGA+AGG | 0.513847 | 6_4:+7964915 | None:intergenic |
| CCAAGTCAAAGCATCACAAT+TGG | 0.514348 | 6_4:-7964904 | Msa0974710:CDS |
| CCAATTGTGATGCTTTGACT+TGG | 0.515642 | 6_4:+7964904 | None:intergenic |
| TCAAACACTTCAAAGCCATT+GGG | 0.536824 | 6_4:-7959773 | Msa0974710:CDS |
| TTGGGATTGCTTGTAGGAGA+AGG | 0.548891 | 6_4:-7964865 | Msa0974710:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTTTGAATTAAATAT+AGG | - | chr6_4:7960094-7960113 | Msa0974710:intron | 10.0% |
| !! | AAGAAAAAAAAAAGATTATT+AGG | - | chr6_4:7964962-7964981 | Msa0974710:CDS | 10.0% |
| !! | AGAAAAAAAAAAGATTATTA+GGG | - | chr6_4:7964963-7964982 | Msa0974710:CDS | 10.0% |
| !! | ATTAAATATAGGTTTATGAA+TGG | - | chr6_4:7960105-7960124 | Msa0974710:intron | 15.0% |
| !! | ATGAACATCAAAATATAAAT+AGG | + | chr6_4:7960150-7960169 | None:intergenic | 15.0% |
| !! | TATTAAAAATATTGTGTTTG+AGG | - | chr6_4:7960387-7960406 | Msa0974710:intron | 15.0% |
| !!! | CTTTTTTTTTTTTTAAGGAA+AGG | + | chr6_4:7964500-7964519 | None:intergenic | 15.0% |
| !!! | TTTGAGTTTGAATTAAATAT+TGG | - | chr6_4:7964575-7964594 | Msa0974710:intron | 15.0% |
| !!! | AATTAAATATTGGTTTATGA+AGG | - | chr6_4:7964773-7964792 | Msa0974710:intron | 15.0% |
| !!! | ATTAAATATTGGTTTATGAA+GGG | - | chr6_4:7964774-7964793 | Msa0974710:intron | 15.0% |
| !! | ACATAAACTTGTAAAATTCA+TGG | + | chr6_4:7960013-7960032 | None:intergenic | 20.0% |
| !! | TTATGTGTAATAGTCTTTAA+TGG | - | chr6_4:7960027-7960046 | Msa0974710:intron | 20.0% |
| !! | TATGTGTAATAGTCTTTAAT+GGG | - | chr6_4:7960028-7960047 | Msa0974710:intron | 20.0% |
| !! | TTCAAACTAAAAACATGAAA+AGG | + | chr6_4:7960086-7960105 | None:intergenic | 20.0% |
| !!! | AAAAAAAGATTTGCTTGTAA+AGG | - | chr6_4:7960335-7960354 | Msa0974710:intron | 20.0% |
| !!! | ATTATTTGAGTAACTTGTAA+TGG | + | chr6_4:7960694-7960713 | None:intergenic | 20.0% |
| !! | TTAACATAATTGCTAAAATC+AGG | + | chr6_4:7961218-7961237 | None:intergenic | 20.0% |
| !!! | TGATTTTAGCAATTATGTTA+AGG | - | chr6_4:7961217-7961236 | Msa0974710:intron | 20.0% |
| !!! | AAAATTTCTGAAAAAAAACC+AGG | + | chr6_4:7961818-7961837 | None:intergenic | 20.0% |
| !!! | TGGTTTTTTTTCAGAAATTT+TGG | - | chr6_4:7961817-7961836 | Msa0974710:intron | 20.0% |
| !!! | GGTTTTTTTTCAGAAATTTT+GGG | - | chr6_4:7961818-7961837 | Msa0974710:intron | 20.0% |
| !!! | GTTTTTTTTCAGAAATTTTG+GGG | - | chr6_4:7961819-7961838 | Msa0974710:intron | 20.0% |
| !! | AATATTGTTCTTATTCCAAA+AGG | - | chr6_4:7961921-7961940 | Msa0974710:intron | 20.0% |
| !! | TATCCAATACTAATTTCAAT+CGG | + | chr6_4:7962031-7962050 | None:intergenic | 20.0% |
| !! | GCACAAATAATAAACAAATA+CGG | + | chr6_4:7962334-7962353 | None:intergenic | 20.0% |
| !!! | TACAAAAAATCTCTGATTTT+TGG | + | chr6_4:7962561-7962580 | None:intergenic | 20.0% |
| !!! | ATAAAATTTTTTACCTTTGG+AGG | + | chr6_4:7963555-7963574 | None:intergenic | 20.0% |
| !!! | CACATAAAATTTTTTACCTT+TGG | + | chr6_4:7963558-7963577 | None:intergenic | 20.0% |
| !!! | CAAAGGTAAAAAATTTTATG+TGG | - | chr6_4:7963556-7963575 | Msa0974710:intron | 20.0% |
| !! | TTAGGGTATATTAGTATTTA+TGG | - | chr6_4:7964713-7964732 | Msa0974710:intron | 20.0% |
| !!! | TTGCAGATATTTATACTTTT+AGG | - | chr6_4:7964886-7964905 | Msa0974710:CDS | 20.0% |
| !!! | TGCAGATATTTATACTTTTA+GGG | - | chr6_4:7964887-7964906 | Msa0974710:CDS | 20.0% |
| ! | AAAACAAGGATGATTTACAA+AGG | + | chr6_4:7959957-7959976 | None:intergenic | 25.0% |
| ! | TGTAAAATTCATGGATATAG+AGG | + | chr6_4:7960004-7960023 | None:intergenic | 25.0% |
| !! | AATTTTCATGACTTATGGAT+GGG | + | chr6_4:7960445-7960464 | None:intergenic | 25.0% |
| !! | TAATTTTCATGACTTATGGA+TGG | + | chr6_4:7960446-7960465 | None:intergenic | 25.0% |
| !! | CTGATAATTTTCATGACTTA+TGG | + | chr6_4:7960450-7960469 | None:intergenic | 25.0% |
| ! | AAGTCATGAAAATTATCAGT+TGG | - | chr6_4:7960451-7960470 | Msa0974710:intron | 25.0% |
| ! | TGGATATCAATAAAGGAAAA+TGG | - | chr6_4:7960733-7960752 | Msa0974710:intron | 25.0% |
| !!! | GGTTTTCTAAAATTGCATTT+GGG | + | chr6_4:7961085-7961104 | None:intergenic | 25.0% |
| !!! | AGGTTTTCTAAAATTGCATT+TGG | + | chr6_4:7961086-7961105 | None:intergenic | 25.0% |
| ! | GCAATTATGTTAAGGAAAAA+TGG | - | chr6_4:7961225-7961244 | Msa0974710:intron | 25.0% |
| ! | ATATCCAATTTATCACCAAT+TGG | + | chr6_4:7961269-7961288 | None:intergenic | 25.0% |
| !!! | TCAATTCTTTTAATTCTCTC+AGG | - | chr6_4:7961405-7961424 | Msa0974710:intron | 25.0% |
| ! | CATGAAAGAATTTAGTATTG+AGG | + | chr6_4:7961511-7961530 | None:intergenic | 25.0% |
| ! | CATTCATGAATCTATATCTT+TGG | - | chr6_4:7961691-7961710 | Msa0974710:intron | 25.0% |
| ! | TTGAATTCATCTATCACAAA+AGG | + | chr6_4:7961740-7961759 | None:intergenic | 25.0% |
| !! | TTTTGTGATAGATGAATTCA+AGG | - | chr6_4:7961739-7961758 | Msa0974710:intron | 25.0% |
| ! | GAACAATATTAGTCATATTC+AGG | + | chr6_4:7961911-7961930 | None:intergenic | 25.0% |
| ! | AAACCGATTGAAATTAGTAT+TGG | - | chr6_4:7962025-7962044 | Msa0974710:intron | 25.0% |
| ! | AATTCACTACATGAAATCAA+AGG | - | chr6_4:7962127-7962146 | Msa0974710:intron | 25.0% |
| ! | TAAACAAATACGGAGATAAA+GGG | + | chr6_4:7962324-7962343 | None:intergenic | 25.0% |
| ! | ATAAACAAATACGGAGATAA+AGG | + | chr6_4:7962325-7962344 | None:intergenic | 25.0% |
| ! | TTGTTTATTATTTGTGCTGA+AGG | - | chr6_4:7962337-7962356 | Msa0974710:intron | 25.0% |
| ! | AATAAGAGGTGAGATATAAT+TGG | + | chr6_4:7962433-7962452 | None:intergenic | 25.0% |
| !!! | AAAAAATCTCTGATTTTTGG+AGG | + | chr6_4:7962558-7962577 | None:intergenic | 25.0% |
| !! | TAATAACATTGCAAGCATTT+TGG | - | chr6_4:7962606-7962625 | Msa0974710:intron | 25.0% |
| !! | AATAACATTGCAAGCATTTT+GGG | - | chr6_4:7962607-7962626 | Msa0974710:intron | 25.0% |
| ! | TCTAGGTACTAGTAAATATT+TGG | - | chr6_4:7962642-7962661 | Msa0974710:intron | 25.0% |
| ! | CTAGGTACTAGTAAATATTT+GGG | - | chr6_4:7962643-7962662 | Msa0974710:intron | 25.0% |
| ! | TAGGTACTAGTAAATATTTG+GGG | - | chr6_4:7962644-7962663 | Msa0974710:intron | 25.0% |
| ! | TTTGGAAGAAGATAAATTCA+TGG | - | chr6_4:7962725-7962744 | Msa0974710:intron | 25.0% |
| !! | AAAGAATGATGAATTCCTTT+TGG | - | chr6_4:7962866-7962885 | Msa0974710:intron | 25.0% |
| ! | TCTAAATTTATTCTCAAAGC+TGG | - | chr6_4:7963153-7963172 | Msa0974710:intron | 25.0% |
| ! | TACACAATGTACAATTCATA+GGG | + | chr6_4:7963641-7963660 | None:intergenic | 25.0% |
| ! | TATGAATTGTACATTGTGTA+CGG | - | chr6_4:7963641-7963660 | Msa0974710:intron | 25.0% |
| ! | AGCATTACAAGATTTATCTA+AGG | - | chr6_4:7963797-7963816 | Msa0974710:intron | 25.0% |
| ! | AAAATGTGTTCAATACAATC+TGG | + | chr6_4:7964455-7964474 | None:intergenic | 25.0% |
| ! | TTAGGGTATATTAGCATTTA+TGG | - | chr6_4:7964524-7964543 | Msa0974710:intron | 25.0% |
| ! | ATTCAAACTCAAAACATGAA+AGG | + | chr6_4:7964568-7964587 | None:intergenic | 25.0% |
| !!! | TTCTTCTCTTCCTTCTTTTT+TGG | + | chr6_4:7959777-7959796 | None:intergenic | 30.0% |
| TGAAGGAGAAAATGAAAACA+AGG | + | chr6_4:7959971-7959990 | None:intergenic | 30.0% | |
| AATTCATGGATATAGAGGAA+GGG | + | chr6_4:7959999-7960018 | None:intergenic | 30.0% | |
| AAATTCATGGATATAGAGGA+AGG | + | chr6_4:7960000-7960019 | None:intergenic | 30.0% | |
| ATAGGTTTATGAATGGTTGA+AGG | - | chr6_4:7960112-7960131 | Msa0974710:intron | 30.0% | |
| AGTTAGTTCATTTGTCTACT+TGG | - | chr6_4:7960235-7960254 | Msa0974710:intron | 30.0% | |
| AAATTATCAGTTGGAATTGC+AGG | - | chr6_4:7960460-7960479 | Msa0974710:intron | 30.0% | |
| AATTATCAGTTGGAATTGCA+GGG | - | chr6_4:7960461-7960480 | Msa0974710:intron | 30.0% | |
| CATAGTACGAGTTTATAAAC+CGG | - | chr6_4:7960521-7960540 | Msa0974710:intron | 30.0% | |
| ! | TTCTGGAAAACCATAATAAC+CGG | + | chr6_4:7960766-7960785 | None:intergenic | 30.0% |
| ! | GTTTTCCAGAAAATAGTAGA+AGG | - | chr6_4:7960775-7960794 | Msa0974710:intron | 30.0% |
| ! | TCTTTCCTTCTACTATTTTC+TGG | + | chr6_4:7960783-7960802 | None:intergenic | 30.0% |
| ! | TTCCTTCCTTTCTTTTCATT+TGG | + | chr6_4:7960888-7960907 | None:intergenic | 30.0% |
| TTGTAGATGTTCATATGGAA+GGG | - | chr6_4:7960964-7960983 | Msa0974710:intron | 30.0% | |
| AATTGCTAAAATCAGGATCA+AGG | + | chr6_4:7961211-7961230 | None:intergenic | 30.0% | |
| TATGTTAAGGAAAAATGGAG+TGG | - | chr6_4:7961230-7961249 | Msa0974710:intron | 30.0% | |
| ! | TCAACCAATTGGTGATAAAT+TGG | - | chr6_4:7961262-7961281 | Msa0974710:intron | 30.0% |
| TAAATTGGATATGTGTGCAA+TGG | - | chr6_4:7961277-7961296 | Msa0974710:intron | 30.0% | |
| CATCAATGAGAGAAGTAATA+CGG | + | chr6_4:7961562-7961581 | None:intergenic | 30.0% | |
| TAATGAAGACAAACTTTGTG+AGG | - | chr6_4:7961601-7961620 | Msa0974710:intron | 30.0% | |
| TCATGAATGACATCAATAAC+TGG | + | chr6_4:7961680-7961699 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTCAATGTTGTGAG+TGG | - | chr6_4:7961859-7961878 | Msa0974710:intron | 30.0% |
| ! | TTAGTCATATTCAGGTTAGA+GGG | + | chr6_4:7961903-7961922 | None:intergenic | 30.0% |
| ! | ATTAGTCATATTCAGGTTAG+AGG | + | chr6_4:7961904-7961923 | None:intergenic | 30.0% |
| AATTATTTCAATAGCAGCCA+TGG | + | chr6_4:7962111-7962130 | None:intergenic | 30.0% | |
| ATGAAATCAAAGGTTATGAC+AGG | - | chr6_4:7962137-7962156 | Msa0974710:intron | 30.0% | |
| !! | TTTCTGATCAATGGGTTAAA+TGG | - | chr6_4:7962203-7962222 | Msa0974710:intron | 30.0% |
| GATTATGATGTGTGTTGAAA+CGG | - | chr6_4:7962225-7962244 | Msa0974710:intron | 30.0% | |
| AACAATCATCAGCAAATAAG+AGG | + | chr6_4:7962447-7962466 | None:intergenic | 30.0% | |
| TCTCTCATAGGTAGATAAAA+TGG | + | chr6_4:7962515-7962534 | None:intergenic | 30.0% | |
| !! | ATCAACCTTCAGCTTTATTA+AGG | - | chr6_4:7962696-7962715 | Msa0974710:intron | 30.0% |
| ! | GCTTTATTAAGGATAGGATT+TGG | - | chr6_4:7962707-7962726 | Msa0974710:intron | 30.0% |
| ACAAACTCATAAAGTAGGTA+GGG | + | chr6_4:7962813-7962832 | None:intergenic | 30.0% | |
| AACAAACTCATAAAGTAGGT+AGG | + | chr6_4:7962814-7962833 | None:intergenic | 30.0% | |
| AGTGAACAAACTCATAAAGT+AGG | + | chr6_4:7962818-7962837 | None:intergenic | 30.0% | |
| ! | AATGATGAATTCCTTTTGGT+GGG | - | chr6_4:7962870-7962889 | Msa0974710:intron | 30.0% |
| AACATAGCTAGATTAAAGGT+AGG | + | chr6_4:7962991-7963010 | None:intergenic | 30.0% | |
| ACCTTTAATCTAGCTATGTT+AGG | - | chr6_4:7962991-7963010 | Msa0974710:intron | 30.0% | |
| TCCTAACATAGCTAGATTAA+AGG | + | chr6_4:7962995-7963014 | None:intergenic | 30.0% | |
| GACTCAAAGAAATTACACTT+GGG | + | chr6_4:7963087-7963106 | None:intergenic | 30.0% | |
| ! | AATTTCTTTGAGTCGACTTT+AGG | - | chr6_4:7963093-7963112 | Msa0974710:intron | 30.0% |
| TTACTATATGTTCAACTACC+TGG | + | chr6_4:7963365-7963384 | None:intergenic | 30.0% | |
| ATCTGGAAAAAAGAAAATCG+TGG | - | chr6_4:7963423-7963442 | Msa0974710:intron | 30.0% | |
| GTAATTCTTGCACACAAAAA+TGG | + | chr6_4:7963473-7963492 | None:intergenic | 30.0% | |
| ! | ATTTTATGTGGCGAATTTGT+AGG | - | chr6_4:7963568-7963587 | Msa0974710:intron | 30.0% |
| GTACACAATGTACAATTCAT+AGG | + | chr6_4:7963642-7963661 | None:intergenic | 30.0% | |
| ! | TGTTTTGCTTCAACAAGATA+TGG | - | chr6_4:7963752-7963771 | Msa0974710:intron | 30.0% |
| !!! | CTTTATTTTGTTGTGTGTTG+TGG | - | chr6_4:7963829-7963848 | Msa0974710:intron | 30.0% |
| CAAAAGTTATGCTTCATGAT+TGG | - | chr6_4:7963925-7963944 | Msa0974710:intron | 30.0% | |
| GTTTGTATAAGAGATGATAC+AGG | - | chr6_4:7964092-7964111 | Msa0974710:intron | 30.0% | |
| !!! | TTGTTTTGGCAAAAACTGAA+TGG | - | chr6_4:7964120-7964139 | Msa0974710:intron | 30.0% |
| !! | ACTGTTATCAGCTTTAGAAT+GGG | - | chr6_4:7964184-7964203 | Msa0974710:intron | 30.0% |
| TGAGCTTAATGCTAAAAAAG+TGG | - | chr6_4:7964238-7964257 | Msa0974710:intron | 30.0% | |
| ATCAGGATGTTACAGAATTT+GGG | - | chr6_4:7964282-7964301 | Msa0974710:intron | 30.0% | |
| AGTTAGTTCATTTGTCTACT+TGG | - | chr6_4:7960235-7960254 | Msa0974710:intron | 30.0% | |
| ! | CTACTTATATTTCAAGTAGC+TGG | - | chr6_4:7964846-7964865 | Msa0974710:intron | 30.0% |
| AATCCCTCATCCAAAAAAGA+AGG | - | chr6_4:7959764-7959783 | Msa0974710:CDS | 35.0% | |
| !!! | CTTCCTTCTTTTTTGGATGA+GGG | + | chr6_4:7959770-7959789 | None:intergenic | 35.0% |
| !!! | TCTTCCTTCTTTTTTGGATG+AGG | + | chr6_4:7959771-7959790 | None:intergenic | 35.0% |
| !! | AACACAAAAGCACTTCTGAT+TGG | - | chr6_4:7959810-7959829 | Msa0974710:intron | 35.0% |
| GCACTTCTGATTGGATTAAT+TGG | - | chr6_4:7959819-7959838 | Msa0974710:intron | 35.0% | |
| GGTTTGTGAGTAAGCAAATA+AGG | + | chr6_4:7959856-7959875 | None:intergenic | 35.0% | |
| ATAGAGGAAGGGAAAATTGA+AGG | + | chr6_4:7959988-7960007 | None:intergenic | 35.0% | |
| ATGAATGGTTGAAGGAAAAG+TGG | - | chr6_4:7960120-7960139 | Msa0974710:intron | 35.0% | |
| TGAGGAAAATGATGTAACAC+CGG | - | chr6_4:7960405-7960424 | Msa0974710:intron | 35.0% | |
| ATTATCAGTTGGAATTGCAG+GGG | - | chr6_4:7960462-7960481 | Msa0974710:intron | 35.0% | |
| TCACATAAGTAGAGGATATC+CGG | + | chr6_4:7960543-7960562 | None:intergenic | 35.0% | |
| TGATAGTCTCACATAAGTAG+AGG | + | chr6_4:7960551-7960570 | None:intergenic | 35.0% | |
| CACAACGTCTATTAAAACTG+AGG | - | chr6_4:7960569-7960588 | Msa0974710:intron | 35.0% | |
| GAGGAATTAAGATATGCTCT+CGG | - | chr6_4:7960588-7960607 | Msa0974710:intron | 35.0% | |
| AGGAATTAAGATATGCTCTC+GGG | - | chr6_4:7960589-7960608 | Msa0974710:intron | 35.0% | |
| ! | TGTTTTACTGTTAACCGACA+AGG | - | chr6_4:7960621-7960640 | Msa0974710:intron | 35.0% |
| TAATCACATAGATGCTGAAG+TGG | - | chr6_4:7960710-7960729 | Msa0974710:intron | 35.0% | |
| !! | GAAGTGGTGGATATCAATAA+AGG | - | chr6_4:7960726-7960745 | Msa0974710:intron | 35.0% |
| AAAGGAAAATGGCGTTTAAC+CGG | - | chr6_4:7960744-7960763 | Msa0974710:intron | 35.0% | |
| ATAGTAGAAGGAAAGATGCT+TGG | - | chr6_4:7960787-7960806 | Msa0974710:intron | 35.0% | |
| CTTTCGCCAAATGAAAAGAA+AGG | - | chr6_4:7960879-7960898 | Msa0974710:intron | 35.0% | |
| AAAAGAAAGGAAGGAATGAG+AGG | - | chr6_4:7960892-7960911 | Msa0974710:intron | 35.0% | |
| AAAGAAAGGAAGGAATGAGA+GGG | - | chr6_4:7960893-7960912 | Msa0974710:intron | 35.0% | |
| CTTGTAGATGTTCATATGGA+AGG | - | chr6_4:7960963-7960982 | Msa0974710:intron | 35.0% | |
| TATACTTGGTTCAAAAGCCT+TGG | - | chr6_4:7960993-7961012 | Msa0974710:intron | 35.0% | |
| GGTTCACAAAGCAACATAAT+GGG | + | chr6_4:7961134-7961153 | None:intergenic | 35.0% | |
| TGGTTCACAAAGCAACATAA+TGG | + | chr6_4:7961135-7961154 | None:intergenic | 35.0% | |
| !! | ATTATGTTGCTTTGTGAACC+AGG | - | chr6_4:7961134-7961153 | Msa0974710:intron | 35.0% |
| AAGGAAAAATGGAGTGGTTA+TGG | - | chr6_4:7961236-7961255 | Msa0974710:intron | 35.0% | |
| GTAAGAAACTTGATGTCATG+CGG | - | chr6_4:7961360-7961379 | Msa0974710:intron | 35.0% | |
| ! | TTGTGCAAGAAGATGCATTT+TGG | - | chr6_4:7961447-7961466 | Msa0974710:intron | 35.0% |
| TGTGATAGATGAATTCAAGG+AGG | - | chr6_4:7961742-7961761 | Msa0974710:intron | 35.0% | |
| ! | ATCTGGCTTCATAGACAAAA+TGG | + | chr6_4:7961768-7961787 | None:intergenic | 35.0% |
| ACCACATTACACAAAGCAAT+AGG | + | chr6_4:7961978-7961997 | None:intergenic | 35.0% | |
| !! | CAATCGGTTTGCTAAAACTT+TGG | + | chr6_4:7962015-7962034 | None:intergenic | 35.0% |
| GTCTATCTTAGATAATGCCA+TGG | - | chr6_4:7962091-7962110 | Msa0974710:intron | 35.0% | |
| AAGGTTATGACAGGATTGAT+TGG | - | chr6_4:7962146-7962165 | Msa0974710:intron | 35.0% | |
| ATTGATTGGAGTTATCTTCG+AGG | - | chr6_4:7962160-7962179 | Msa0974710:intron | 35.0% | |
| TTGATTGGAGTTATCTTCGA+GGG | - | chr6_4:7962161-7962180 | Msa0974710:intron | 35.0% | |
| ! | GATTACTCTGTGCTTGTTAA+TGG | - | chr6_4:7962250-7962269 | Msa0974710:intron | 35.0% |
| !! | CCACATTTGCTCTAAAAAAG+AGG | + | chr6_4:7962471-7962490 | None:intergenic | 35.0% |
| !!! | CCTCTTTTTTAGAGCAAATG+TGG | - | chr6_4:7962468-7962487 | Msa0974710:intron | 35.0% |
| CCTATCCTTAATAAAGCTGA+AGG | + | chr6_4:7962704-7962723 | None:intergenic | 35.0% | |
| !! | CCTTCAGCTTTATTAAGGAT+AGG | - | chr6_4:7962701-7962720 | Msa0974710:intron | 35.0% |
| AGTAAAAGTCTGTCAAAAGC+CGG | - | chr6_4:7962751-7962770 | Msa0974710:intron | 35.0% | |
| TTTCATCACAATGAGAGACA+GGG | + | chr6_4:7962843-7962862 | None:intergenic | 35.0% | |
| ATTTCATCACAATGAGAGAC+AGG | + | chr6_4:7962844-7962863 | None:intergenic | 35.0% | |
| ! | GAATGATGAATTCCTTTTGG+TGG | - | chr6_4:7962869-7962888 | Msa0974710:intron | 35.0% |
| ! | ATGATGAATTCCTTTTGGTG+GGG | - | chr6_4:7962871-7962890 | Msa0974710:intron | 35.0% |
| !! | GTCAAAGTAGAGGTATTAAC+TGG | - | chr6_4:7962905-7962924 | Msa0974710:intron | 35.0% |
| !! | AGGTATTAACTGGCTTTCTT+GGG | - | chr6_4:7962915-7962934 | Msa0974710:intron | 35.0% |
| TCTAGCTATGTTAGGAAAAC+AGG | - | chr6_4:7962999-7963018 | Msa0974710:intron | 35.0% | |
| CTAGCTATGTTAGGAAAACA+GGG | - | chr6_4:7963000-7963019 | Msa0974710:intron | 35.0% | |
| ! | TATGACAAATCCTGATTCGT+TGG | - | chr6_4:7963032-7963051 | Msa0974710:intron | 35.0% |
| CGACTCAAAGAAATTACACT+TGG | + | chr6_4:7963088-7963107 | None:intergenic | 35.0% | |
| GAAAATCTTCATCAGCATGT+GGG | + | chr6_4:7963257-7963276 | None:intergenic | 35.0% | |
| TCAAAAATTGACTGCAGGAA+AGG | + | chr6_4:7963339-7963358 | None:intergenic | 35.0% | |
| !! | ACATCCCATTTCAAGTTACA+AGG | - | chr6_4:7963498-7963517 | Msa0974710:intron | 35.0% |
| ! | AGAGCCTTGTAACTTGAAAT+GGG | + | chr6_4:7963505-7963524 | None:intergenic | 35.0% |
| ! | AAGAGCCTTGTAACTTGAAA+TGG | + | chr6_4:7963506-7963525 | None:intergenic | 35.0% |
| !! | ATTTCAAGTTACAAGGCTCT+TGG | - | chr6_4:7963505-7963524 | Msa0974710:intron | 35.0% |
| AAGGCTCTTGGAATCTAATT+TGG | - | chr6_4:7963517-7963536 | Msa0974710:intron | 35.0% | |
| GAATCTAATTTGGAAGCTCA+AGG | - | chr6_4:7963527-7963546 | Msa0974710:intron | 35.0% | |
| CGTGTACGTCTAAAAGATAA+AGG | - | chr6_4:7963606-7963625 | Msa0974710:intron | 35.0% | |
| GTCCAAGTAGCTTAAATGTT+TGG | - | chr6_4:7963700-7963719 | Msa0974710:intron | 35.0% | |
| CTCCAAACATTTAAGCTACT+TGG | + | chr6_4:7963705-7963724 | None:intergenic | 35.0% | |
| AACAAAGAAACAACAGAGTG+TGG | - | chr6_4:7963862-7963881 | Msa0974710:intron | 35.0% | |
| CTTTCTAATAGAGTGGGAAT+AGG | - | chr6_4:7964068-7964087 | Msa0974710:intron | 35.0% | |
| !! | TGATACAGGCACTTTTGTTT+TGG | - | chr6_4:7964106-7964125 | Msa0974710:intron | 35.0% |
| !! | GACTGTTATCAGCTTTAGAA+TGG | - | chr6_4:7964183-7964202 | Msa0974710:intron | 35.0% |
| ATGGGTTCATCAGTTACATT+TGG | - | chr6_4:7964202-7964221 | Msa0974710:intron | 35.0% | |
| TGGGTTCATCAGTTACATTT+GGG | - | chr6_4:7964203-7964222 | Msa0974710:intron | 35.0% | |
| GCATTAAGCTCAAAATCGAA+AGG | + | chr6_4:7964230-7964249 | None:intergenic | 35.0% | |
| GCTTAATGCTAAAAAAGTGG+TGG | - | chr6_4:7964241-7964260 | Msa0974710:intron | 35.0% | |
| ! | TAGTTTTTCATCTGCACATC+AGG | - | chr6_4:7964265-7964284 | Msa0974710:intron | 35.0% |
| CATCAGGATGTTACAGAATT+TGG | - | chr6_4:7964281-7964300 | Msa0974710:intron | 35.0% | |
| !! | TATTGGTTTATGAAGGGTTG+TGG | - | chr6_4:7964780-7964799 | Msa0974710:intron | 35.0% |
| ! | ATTGGTTTATGAAGGGTTGT+GGG | - | chr6_4:7964781-7964800 | Msa0974710:intron | 35.0% |
| TCAAACACTTCAAAGCCATT+GGG | - | chr6_4:7965016-7965035 | Msa0974710:CDS | 35.0% | |
| ! | TCCGAAAAGACAACATCTTT+TGG | - | chr6_4:7965041-7965060 | Msa0974710:CDS | 35.0% |
| ! | GCCAAAAGATGTTGTCTTTT+CGG | + | chr6_4:7965045-7965064 | None:intergenic | 35.0% |
| !! | GCTTTGACTTGGTGATATGA+AGG | + | chr6_4:7959877-7959896 | None:intergenic | 40.0% |
| CCAATTGTGATGCTTTGACT+TGG | + | chr6_4:7959888-7959907 | None:intergenic | 40.0% | |
| ! | CCAAGTCAAAGCATCACAAT+TGG | - | chr6_4:7959885-7959904 | Msa0974710:intron | 40.0% |
| TGGTCTCCTTATTCTCATGT+TGG | - | chr6_4:7959905-7959924 | Msa0974710:intron | 40.0% | |
| GGTCTCCTTATTCTCATGTT+GGG | - | chr6_4:7959906-7959925 | Msa0974710:intron | 40.0% | |
| GCAATCCCAACATGAGAATA+AGG | + | chr6_4:7959914-7959933 | None:intergenic | 40.0% | |
| GAGGAAAATGATGTAACACC+GGG | - | chr6_4:7960406-7960425 | Msa0974710:intron | 40.0% | |
| TCAACCTAGGAACTGTATGA+GGG | + | chr6_4:7960497-7960516 | None:intergenic | 40.0% | |
| TTCAACCTAGGAACTGTATG+AGG | + | chr6_4:7960498-7960517 | None:intergenic | 40.0% | |
| CGTACTATGTACTTCAACCT+AGG | + | chr6_4:7960510-7960529 | None:intergenic | 40.0% | |
| !!! | GTGGAGGTCTTGTGTTATTT+TGG | - | chr6_4:7960649-7960668 | Msa0974710:intron | 40.0% |
| TGGCGTTTAACCGGTTATTA+TGG | - | chr6_4:7960753-7960772 | Msa0974710:intron | 40.0% | |
| AAATCACCCAAAATGCACCA+AGG | + | chr6_4:7960849-7960868 | None:intergenic | 40.0% | |
| CGCCAAATGAAAAGAAAGGA+AGG | - | chr6_4:7960883-7960902 | Msa0974710:intron | 40.0% | |
| AGGGCTAACTGGTTAATAAG+TGG | - | chr6_4:7960912-7960931 | Msa0974710:intron | 40.0% | |
| ! | GGGTCTTGTAGATGTTCATA+TGG | - | chr6_4:7960959-7960978 | Msa0974710:intron | 40.0% |
| ! | TGGAAGGGTATGCTTATACT+TGG | - | chr6_4:7960979-7960998 | Msa0974710:intron | 40.0% |
| TTGGTTCAAAAGCCTTGGTA+CGG | - | chr6_4:7960998-7961017 | Msa0974710:intron | 40.0% | |
| GTGCTTTAGCTACTGATACT+TGG | - | chr6_4:7961048-7961067 | Msa0974710:intron | 40.0% | |
| ATGGGATTGTGATCTGAAGA+TGG | + | chr6_4:7961116-7961135 | None:intergenic | 40.0% | |
| GGTTCAAATTCGAGAATGCT+TGG | - | chr6_4:7961183-7961202 | Msa0974710:intron | 40.0% | |
| !! | GTGCAATGGATCTTTTGAGT+TGG | - | chr6_4:7961291-7961310 | Msa0974710:intron | 40.0% |
| ! | AAAACACATTGGCTACGAGA+CGG | - | chr6_4:7961482-7961501 | Msa0974710:intron | 40.0% |
| ATGAAGCCAGATAAATGTCC+AGG | - | chr6_4:7961776-7961795 | Msa0974710:intron | 40.0% | |
| AAACCAGGATTGAATCGATC+TGG | + | chr6_4:7961803-7961822 | None:intergenic | 40.0% | |
| !! | CAGAAATTTTGGGGAAGTTC+TGG | - | chr6_4:7961828-7961847 | Msa0974710:intron | 40.0% |
| ! | CATATTCAGGTTAGAGGGAA+AGG | + | chr6_4:7961898-7961917 | None:intergenic | 40.0% |
| CCAATCCTTCATTGAGACTT+GGG | + | chr6_4:7961952-7961971 | None:intergenic | 40.0% | |
| TCCAATCCTTCATTGAGACT+TGG | + | chr6_4:7961953-7961972 | None:intergenic | 40.0% | |
| AAGTCTCAATGAAGGATTGG+AGG | - | chr6_4:7961952-7961971 | Msa0974710:intron | 40.0% | |
| GCCTATTGCTTTGTGTAATG+TGG | - | chr6_4:7961974-7961993 | Msa0974710:intron | 40.0% | |
| ! | TTATCTAAGATAGACCTCCC+AGG | + | chr6_4:7962086-7962105 | None:intergenic | 40.0% |
| TGATTGGAGTTATCTTCGAG+GGG | - | chr6_4:7962162-7962181 | Msa0974710:intron | 40.0% | |
| ! | AGATGGGGTTTTCTGATCAA+TGG | - | chr6_4:7962194-7962213 | Msa0974710:intron | 40.0% |
| ! | GATGGGGTTTTCTGATCAAT+GGG | - | chr6_4:7962195-7962214 | Msa0974710:intron | 40.0% |
| TATGATGTGTGTTGAAACGG+TGG | - | chr6_4:7962228-7962247 | Msa0974710:intron | 40.0% | |
| TTATTCGAAAAGCTGAAGCG+AGG | - | chr6_4:7962371-7962390 | Msa0974710:intron | 40.0% | |
| TATTCGAAAAGCTGAAGCGA+GGG | - | chr6_4:7962372-7962391 | Msa0974710:intron | 40.0% | |
| TTTGATGAGAACTTCACGAC+CGG | + | chr6_4:7962773-7962792 | None:intergenic | 40.0% | |
| !! | GAGGTATTAACTGGCTTTCT+TGG | - | chr6_4:7962914-7962933 | Msa0974710:intron | 40.0% |
| CTGTCTATGCACAAGAATGA+TGG | - | chr6_4:7962943-7962962 | Msa0974710:intron | 40.0% | |
| TCTATGCACAAGAATGATGG+AGG | - | chr6_4:7962946-7962965 | Msa0974710:intron | 40.0% | |
| !! | GTTGGTAGCTAGACTTTACA+AGG | - | chr6_4:7963050-7963069 | Msa0974710:intron | 40.0% |
| !! | GACATAAGCCTAGCTTTGTA+TGG | - | chr6_4:7963115-7963134 | Msa0974710:intron | 40.0% |
| ! | ATGGTGATGATATCTCGGTT+TGG | - | chr6_4:7963196-7963215 | Msa0974710:intron | 40.0% |
| !! | TCTCGGTTTGGTATAACAAG+TGG | - | chr6_4:7963208-7963227 | Msa0974710:intron | 40.0% |
| GGAAAATCTTCATCAGCATG+TGG | + | chr6_4:7963258-7963277 | None:intergenic | 40.0% | |
| GAAACTCTTAGATCAGCTAG+AGG | + | chr6_4:7963279-7963298 | None:intergenic | 40.0% | |
| AAGGTAGATTCCATTCCTTG+CGG | + | chr6_4:7963320-7963339 | None:intergenic | 40.0% | |
| GGTGATCAAAAATTGACTGC+AGG | + | chr6_4:7963344-7963363 | None:intergenic | 40.0% | |
| ! | GCAGTCAATTTTTGATCACC+AGG | - | chr6_4:7963344-7963363 | Msa0974710:intron | 40.0% |
| ! | TCTTTTAGACGTACACGAGT+TGG | + | chr6_4:7963603-7963622 | None:intergenic | 40.0% |
| ATTGTGTACGGTAAGCAATG+AGG | - | chr6_4:7963653-7963672 | Msa0974710:intron | 40.0% | |
| GTTGTGTGTTGTGGAGTATA+TGG | - | chr6_4:7963838-7963857 | Msa0974710:intron | 40.0% | |
| AAACAACAGAGTGTGGAATG+AGG | - | chr6_4:7963869-7963888 | Msa0974710:intron | 40.0% | |
| GCTCTCTCAACAACATAAAC+TGG | + | chr6_4:7963906-7963925 | None:intergenic | 40.0% | |
| GACAAGAAGGGAATGTGAAA+TGG | - | chr6_4:7963991-7964010 | Msa0974710:intron | 40.0% | |
| CACTTAAATCTTCCTTCAGC+TGG | + | chr6_4:7964023-7964042 | None:intergenic | 40.0% | |
| TCCCAGCTTTCTAATAGAGT+GGG | - | chr6_4:7964062-7964081 | Msa0974710:intron | 40.0% | |
| TCCCACTCTATTAGAAAGCT+GGG | + | chr6_4:7964066-7964085 | None:intergenic | 40.0% | |
| TTCCCACTCTATTAGAAAGC+TGG | + | chr6_4:7964067-7964086 | None:intergenic | 40.0% | |
| ATGGTTTACTCCAGTTTGTG+AGG | - | chr6_4:7964139-7964158 | Msa0974710:intron | 40.0% | |
| ! | ACTCTAGTGTTGAGTTTGTG+AGG | - | chr6_4:7964351-7964370 | Msa0974710:intron | 40.0% |
| TGTGAGGAGACAAACAAATG+AGG | - | chr6_4:7964367-7964386 | Msa0974710:intron | 40.0% | |
| CAAAATCTGGAAACTAGCTG+AGG | + | chr6_4:7964423-7964442 | None:intergenic | 40.0% | |
| !! | CTCAGCTAGTTTCCAGATTT+TGG | - | chr6_4:7964421-7964440 | Msa0974710:intron | 40.0% |
| CTGGTATCTCTACCAAAATC+TGG | + | chr6_4:7964436-7964455 | None:intergenic | 40.0% | |
| ! | AGCTGGTTCATTTGTCTACT+TGG | - | chr6_4:7964863-7964882 | Msa0974710:intron | 40.0% |
| ! | GCATTTATGAGTACTGCATC+TGG | - | chr6_4:7964993-7965012 | Msa0974710:CDS | 40.0% |
| GTCAAACACTTCAAAGCCAT+TGG | - | chr6_4:7965015-7965034 | Msa0974710:CDS | 40.0% | |
| ! | TTGTCTTTTCGGAATCCCAA+TGG | + | chr6_4:7965034-7965053 | None:intergenic | 40.0% |
| CTCATGTTGGGATTGCTTGT+AGG | - | chr6_4:7959918-7959937 | Msa0974710:intron | 45.0% | |
| TTGGGATTGCTTGTAGGAGA+AGG | - | chr6_4:7959924-7959943 | Msa0974710:intron | 45.0% | |
| TTCATGACTTATGGATGGGC+TGG | + | chr6_4:7960441-7960460 | None:intergenic | 45.0% | |
| TCACATAGATGCTGAAGTGG+TGG | - | chr6_4:7960713-7960732 | Msa0974710:intron | 45.0% | |
| ! | CAAATACCTCTAGCTTGCCT+TGG | - | chr6_4:7960829-7960848 | Msa0974710:intron | 45.0% |
| !! | TAGCTTGCCTTGGTGCATTT+TGG | - | chr6_4:7960839-7960858 | Msa0974710:intron | 45.0% |
| !! | AGCTTGCCTTGGTGCATTTT+GGG | - | chr6_4:7960840-7960859 | Msa0974710:intron | 45.0% |
| CTTTGTGAACCAGGCATAAG+AGG | - | chr6_4:7961143-7961162 | Msa0974710:intron | 45.0% | |
| ATTCTTCTGCCTCTTATGCC+TGG | + | chr6_4:7961155-7961174 | None:intergenic | 45.0% | |
| GAGGCAGAAGAATGCAATCA+CGG | - | chr6_4:7961162-7961181 | Msa0974710:intron | 45.0% | |
| GGTTATGGTGCTCAACCAAT+TGG | - | chr6_4:7961251-7961270 | Msa0974710:intron | 45.0% | |
| GACAATCATCAATGTCGCGT+CGG | + | chr6_4:7961340-7961359 | None:intergenic | 45.0% | |
| GTCAACGCGCTAAAACACAT+TGG | - | chr6_4:7961471-7961490 | Msa0974710:intron | 45.0% | |
| TTCACTTTCCTCCTTGAGGA+TGG | + | chr6_4:7961539-7961558 | None:intergenic | 45.0% | |
| !! | GAATGTCGCTGTTTTGAGCT+TGG | + | chr6_4:7961655-7961674 | None:intergenic | 45.0% |
| TCTGGTCCTGGACATTTATC+TGG | + | chr6_4:7961785-7961804 | None:intergenic | 45.0% | |
| AGACTCCCAAGTCTCAATGA+AGG | - | chr6_4:7961944-7961963 | Msa0974710:intron | 45.0% | |
| CCCAAGTCTCAATGAAGGAT+TGG | - | chr6_4:7961949-7961968 | Msa0974710:intron | 45.0% | |
| ! | AGTCAATCAGCTTTTGTGCC+TGG | - | chr6_4:7962065-7962084 | Msa0974710:intron | 45.0% |
| ! | GTCAATCAGCTTTTGTGCCT+GGG | - | chr6_4:7962066-7962085 | Msa0974710:intron | 45.0% |
| TCGAGGGGTTATGACAAAGA+TGG | - | chr6_4:7962177-7962196 | Msa0974710:intron | 45.0% | |
| CGAGGGGTTATGACAAAGAT+GGG | - | chr6_4:7962178-7962197 | Msa0974710:intron | 45.0% | |
| GAGGGGTTATGACAAAGATG+GGG | - | chr6_4:7962179-7962198 | Msa0974710:intron | 45.0% | |
| !! | TCCTGGGATGATTTGACTTG+TGG | + | chr6_4:7962281-7962300 | None:intergenic | 45.0% |
| AGTCAAATCATCCCAGGAAG+AGG | - | chr6_4:7962283-7962302 | Msa0974710:intron | 45.0% | |
| CTTGTCTCAAACCTCTTCCT+GGG | + | chr6_4:7962297-7962316 | None:intergenic | 45.0% | |
| ATTCGAAAAGCTGAAGCGAG+GGG | - | chr6_4:7962373-7962392 | Msa0974710:intron | 45.0% | |
| ! | TGGCTCGCATTTTACTTGCT+TGG | + | chr6_4:7962495-7962514 | None:intergenic | 45.0% |
| TCTACCTATGAGAGAGCTTC+TGG | - | chr6_4:7962520-7962539 | Msa0974710:intron | 45.0% | |
| TGCTCCTGCCTATCATAGAA+GGG | + | chr6_4:7962672-7962691 | None:intergenic | 45.0% | |
| TTGCTCCTGCCTATCATAGA+AGG | + | chr6_4:7962673-7962692 | None:intergenic | 45.0% | |
| CATTCAGGAGGTCAAAGTAG+AGG | - | chr6_4:7962895-7962914 | Msa0974710:intron | 45.0% | |
| CTATGTTAGGAAAACAGGGC+TGG | - | chr6_4:7963004-7963023 | Msa0974710:intron | 45.0% | |
| AGTCTAGCTACCAACGAATC+AGG | + | chr6_4:7963045-7963064 | None:intergenic | 45.0% | |
| ATGCTTCGCCATACAAAGCT+AGG | + | chr6_4:7963126-7963145 | None:intergenic | 45.0% | |
| TTCTCAAAGCTGGAAGCAGA+TGG | - | chr6_4:7963163-7963182 | Msa0974710:intron | 45.0% | |
| ! | AGGCGATGGTGATGATATCT+CGG | - | chr6_4:7963191-7963210 | Msa0974710:intron | 45.0% |
| GTCGATCTGTAGTCACTGAT+GGG | + | chr6_4:7963401-7963420 | None:intergenic | 45.0% | |
| AGTCGATCTGTAGTCACTGA+TGG | + | chr6_4:7963402-7963421 | None:intergenic | 45.0% | |
| ! | TGACTACAGATCGACTCATC+TGG | - | chr6_4:7963406-7963425 | Msa0974710:intron | 45.0% |
| ATGATTGGCAAGATGCACGT+AGG | - | chr6_4:7963940-7963959 | Msa0974710:intron | 45.0% | |
| TTCACATTCCCTTCTTGTCG+CGG | + | chr6_4:7963990-7964009 | None:intergenic | 45.0% | |
| AAATGGATCAAGCCAGCTGA+AGG | - | chr6_4:7964008-7964027 | Msa0974710:intron | 45.0% | |
| CTCCCAGCTTTCTAATAGAG+TGG | - | chr6_4:7964061-7964080 | Msa0974710:intron | 45.0% | |
| CCAACATGTACCTCACAAAC+TGG | + | chr6_4:7964152-7964171 | None:intergenic | 45.0% | |
| CCAGTTTGTGAGGTACATGT+TGG | - | chr6_4:7964149-7964168 | Msa0974710:intron | 45.0% | |
| ! | AGCCCATAGATTAGCTAAGG+CGG | - | chr6_4:7964391-7964410 | Msa0974710:intron | 45.0% |
| !!! | ATTATCTTTTTTTTTTTTTA+AGG | + | chr6_4:7964505-7964524 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAGATAATT+AGG | - | chr6_4:7964506-7964525 | Msa0974710:intron | 5.0% |
| !! | AAAAAAAAAAAAGATAATTA+GGG | - | chr6_4:7964507-7964526 | Msa0974710:intron | 5.0% |
| !! | TTAATAAAAAAAAGATAATT+AGG | - | chr6_4:7964695-7964714 | Msa0974710:intron | 5.0% |
| !! | TAATAAAAAAAAGATAATTA+GGG | - | chr6_4:7964696-7964715 | Msa0974710:intron | 5.0% |
| !! | TTATGGATGGGCTGGAGTTC+AGG | + | chr6_4:7960433-7960452 | None:intergenic | 50.0% |
| ! | AGTTGGAATTGCAGGGGTGT+AGG | - | chr6_4:7960468-7960487 | Msa0974710:intron | 50.0% |
| GTAGCCCTCATACAGTTCCT+AGG | - | chr6_4:7960490-7960509 | Msa0974710:intron | 50.0% | |
| GTTAACCGACAAGGTCGTAG+TGG | - | chr6_4:7960630-7960649 | Msa0974710:intron | 50.0% | |
| AATGCACCAAGGCAAGCTAG+AGG | + | chr6_4:7960838-7960857 | None:intergenic | 50.0% | |
| GAAGGAATGAGAGGGCTAAC+TGG | - | chr6_4:7960901-7960920 | Msa0974710:intron | 50.0% | |
| TCGCAGAGTTGTGCAAGATG+CGG | - | chr6_4:7960938-7960957 | Msa0974710:intron | 50.0% | |
| AAGCCTTGGTACGGTTAGAG+CGG | - | chr6_4:7961007-7961026 | Msa0974710:intron | 50.0% | |
| TTGTGATCTGAAGATGGCGC+AGG | + | chr6_4:7961110-7961129 | None:intergenic | 50.0% | |
| TGATGTCATGCGGAGTCAAG+TGG | - | chr6_4:7961370-7961389 | Msa0974710:intron | 50.0% | |
| TTCATGCAGCACCATCCTCA+AGG | - | chr6_4:7961525-7961544 | Msa0974710:intron | 50.0% | |
| ACGGTTCACTTTCCTCCTTG+AGG | + | chr6_4:7961543-7961562 | None:intergenic | 50.0% | |
| GGATTGAATCGATCTGGTCC+TGG | + | chr6_4:7961797-7961816 | None:intergenic | 50.0% | |
| ! | GGACCAGATCGATTCAATCC+TGG | - | chr6_4:7961797-7961816 | Msa0974710:intron | 50.0% |
| ! | GAGACTTGGGAGTCTCCTTT+TGG | + | chr6_4:7961939-7961958 | None:intergenic | 50.0% |
| ! | AATCAGCTTTTGTGCCTGGG+AGG | - | chr6_4:7962069-7962088 | Msa0974710:intron | 50.0% |
| GCCACAAGTCAAATCATCCC+AGG | - | chr6_4:7962277-7962296 | Msa0974710:intron | 50.0% | |
| CCTTGTCTCAAACCTCTTCC+TGG | + | chr6_4:7962298-7962317 | None:intergenic | 50.0% | |
| ! | CCAGGAAGAGGTTTGAGACA+AGG | - | chr6_4:7962295-7962314 | Msa0974710:intron | 50.0% |
| GAAGCGAGGGGTGAAATCAA+TGG | - | chr6_4:7962385-7962404 | Msa0974710:intron | 50.0% | |
| CTGACCAGAAGCTCTCTCAT+AGG | + | chr6_4:7962527-7962546 | None:intergenic | 50.0% | |
| CTATGAGAGAGCTTCTGGTC+AGG | - | chr6_4:7962525-7962544 | Msa0974710:intron | 50.0% | |
| ! | TGCAAGCATTTTGGGCGTAC+AGG | - | chr6_4:7962615-7962634 | Msa0974710:intron | 50.0% |
| TTGGGGCTCCCTTCTATGAT+AGG | - | chr6_4:7962661-7962680 | Msa0974710:intron | 50.0% | |
| ! | TCCTTTTGGTGGGGACATTC+AGG | - | chr6_4:7962880-7962899 | Msa0974710:intron | 50.0% |
| TCCTGAATGTCCCCACCAAA+AGG | + | chr6_4:7962884-7962903 | None:intergenic | 50.0% | |
| ! | TTTTGGTGGGGACATTCAGG+AGG | - | chr6_4:7962883-7962902 | Msa0974710:intron | 50.0% |
| TCAAAGCTGGAAGCAGATGG+AGG | - | chr6_4:7963166-7963185 | Msa0974710:intron | 50.0% | |
| ! | GTAGTCACTGATGGGTAGAG+TGG | + | chr6_4:7963393-7963412 | None:intergenic | 50.0% |
| GAAGCTCAAGGTTCCTCCAA+AGG | - | chr6_4:7963539-7963558 | Msa0974710:intron | 50.0% | |
| GTACATGTTGGCGAAGCTCT+TGG | - | chr6_4:7964161-7964180 | Msa0974710:intron | 50.0% | |
| ! | GGCAGCCCATAGATTAGCTA+AGG | - | chr6_4:7964388-7964407 | Msa0974710:intron | 50.0% |
| GGCCGCCTTAGCTAATCTAT+GGG | + | chr6_4:7964396-7964415 | None:intergenic | 50.0% | |
| TGGCCGCCTTAGCTAATCTA+TGG | + | chr6_4:7964397-7964416 | None:intergenic | 50.0% | |
| CTGGAAACTAGCTGAGGATG+TGG | + | chr6_4:7964417-7964436 | None:intergenic | 50.0% | |
| AACCGACAAGGTCGTAGTGG+AGG | - | chr6_4:7960633-7960652 | Msa0974710:intron | 55.0% | |
| GACCTCCACTACGACCTTGT+CGG | + | chr6_4:7960638-7960657 | None:intergenic | 55.0% | |
| CGCAGAGTTGTGCAAGATGC+GGG | - | chr6_4:7960939-7960958 | Msa0974710:intron | 55.0% | |
| CAACCGCTCTAACCGTACCA+AGG | + | chr6_4:7961013-7961032 | None:intergenic | 55.0% | |
| ATGCAGCACCATCCTCAAGG+AGG | - | chr6_4:7961528-7961547 | Msa0974710:intron | 55.0% | |
| TGTTGTGAGTGGCTCTCGAC+AGG | - | chr6_4:7961870-7961889 | Msa0974710:intron | 55.0% | |
| TTGGGCGTACAGGCTGTTCT+AGG | - | chr6_4:7962625-7962644 | Msa0974710:intron | 55.0% | |
| GGCTCCCTTCTATGATAGGC+AGG | - | chr6_4:7962665-7962684 | Msa0974710:intron | 55.0% | |
| GCTGGAAGCAGATGGAGGAT+AGG | - | chr6_4:7963171-7963190 | Msa0974710:intron | 55.0% | |
| AGCAGATGGAGGATAGGCGA+TGG | - | chr6_4:7963177-7963196 | Msa0974710:intron | 55.0% | |
| TTGCATGCTGCATGACCGCA+AGG | - | chr6_4:7963302-7963321 | Msa0974710:intron | 55.0% | |
| TGCTGCATGACCGCAAGGAA+TGG | - | chr6_4:7963307-7963326 | Msa0974710:intron | 55.0% | |
| !! | ATGGGCTGGAGTTCAGGTCC+CGG | + | chr6_4:7960427-7960446 | None:intergenic | 60.0% |
| GATCTGAAGATGGCGCAGGC+AGG | + | chr6_4:7961106-7961125 | None:intergenic | 60.0% | |
| TGTGCACAGCCGCGACAAGA+AGG | - | chr6_4:7963978-7963997 | Msa0974710:intron | 60.0% | |
| GTGCACAGCCGCGACAAGAA+GGG | - | chr6_4:7963979-7963998 | Msa0974710:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 7959738 | 7965073 | 7959738 | ID=Msa0974710;Name=Msa0974710 |
| chr6_4 | mRNA | 7959738 | 7965073 | 7959738 | ID=Msa0974710-mRNA-1;Parent=Msa0974710;Name=Msa0974710-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.5|1|1|2|0|95 |
| chr6_4 | exon | 7964866 | 7965073 | 7964866 | ID=Msa0974710-mRNA-1:exon:2994;Parent=Msa0974710-mRNA-1 |
| chr6_4 | exon | 7959738 | 7959817 | 7959738 | ID=Msa0974710-mRNA-1:exon:2993;Parent=Msa0974710-mRNA-1 |
| chr6_4 | CDS | 7964866 | 7965073 | 7964866 | ID=Msa0974710-mRNA-1:cds;Parent=Msa0974710-mRNA-1 |
| chr6_4 | CDS | 7959738 | 7959817 | 7959738 | ID=Msa0974710-mRNA-1:cds;Parent=Msa0974710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
