Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060690 | XP_004498312.2 | 62.500 | 328 | 72 | 5 | 1 | 281 | 1 | 324 | 5.48e-137 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060690 | sp|Q9SSK7|MLP34_ARATH | 31.429 | 315 | 174 | 8 | 2 | 281 | 8 | 315 | 2.69e-49 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060690 | A0A1S2Y2E4 | 62.500 | 328 | 72 | 5 | 1 | 281 | 1 | 324 | 2.62e-137 | 399 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011870 | Msa0060690 | 0.958226 | 3.972676e-116 | -8.615850e-47 |
| Msa0060690 | Msa0105440 | 0.900429 | 7.392981e-78 | -8.615850e-47 |
| Msa0060690 | Msa0121300 | 0.805650 | 1.204725e-49 | -8.615850e-47 |
| Msa0060690 | Msa0139680 | 0.801656 | 8.123172e-49 | -8.615850e-47 |
| Msa0060690 | Msa0151660 | 0.852606 | 4.135217e-61 | -8.615850e-47 |
| Msa0060690 | Msa0224870 | 0.811058 | 8.464950e-51 | -8.615850e-47 |
| Msa0060690 | Msa0231990 | 0.805567 | 1.254397e-49 | -8.615850e-47 |
| Msa0060690 | Msa0232060 | 0.806272 | 8.916797e-50 | -8.615850e-47 |
| Msa0060690 | Msa0257760 | 0.805920 | 1.057620e-49 | -8.615850e-47 |
| Msa0060690 | Msa0287480 | 0.803577 | 3.261987e-49 | -8.615850e-47 |
| Msa0060690 | Msa0298000 | 0.819247 | 1.284135e-52 | -8.615850e-47 |
| Msa0060690 | Msa0303900 | 0.801976 | 6.981831e-49 | -8.615850e-47 |
| Msa0060690 | Msa0318490 | 0.803054 | 4.187102e-49 | -8.615850e-47 |
| Msa0060690 | Msa0333770 | 0.815713 | 8.028982e-52 | -8.615850e-47 |
| Msa0060690 | Msa0345050 | 0.837504 | 4.998129e-57 | -8.615850e-47 |
| Msa0060690 | Msa0345890 | 0.817308 | 3.526893e-52 | -8.615850e-47 |
| Msa0060690 | Msa0378320 | 0.819860 | 9.301579e-53 | -8.615850e-47 |
| Msa0060690 | Msa0380110 | 0.805976 | 1.028957e-49 | -8.615850e-47 |
| Msa0060690 | Msa0393100 | 0.802158 | 6.406354e-49 | -8.615850e-47 |
| Msa0060690 | Msa0405200 | 0.819592 | 1.071343e-52 | -8.615850e-47 |
| Msa0060690 | Msa0427660 | 0.811155 | 8.065213e-51 | -8.615850e-47 |
| Msa0060690 | Msa0429450 | 0.804395 | 2.204825e-49 | -8.615850e-47 |
| Msa0060690 | Msa0429600 | 0.800400 | 1.466968e-48 | -8.615850e-47 |
| Msa0060690 | Msa0440730 | 0.809614 | 1.734664e-50 | -8.615850e-47 |
| Msa0060690 | Msa0441260 | 0.833105 | 6.456829e-56 | -8.615850e-47 |
| Msa0060690 | Msa0449490 | 0.815419 | 9.332769e-52 | -8.615850e-47 |
| Msa0060690 | Msa0449500 | 0.807798 | 4.239200e-50 | -8.615850e-47 |
| Msa0060690 | Msa0460600 | 0.814091 | 1.837771e-51 | -8.615850e-47 |
| Msa0060690 | Msa0497680 | 0.804968 | 1.674596e-49 | -8.615850e-47 |
| Msa0060690 | Msa0497860 | 0.819663 | 1.032099e-52 | -8.615850e-47 |
| Msa0060690 | Msa0501080 | 0.828980 | 6.648942e-55 | -8.615850e-47 |
| Msa0060690 | Msa0531050 | 0.832988 | 6.903349e-56 | -8.615850e-47 |
| Msa0060690 | Msa0557250 | 0.818605 | 1.796827e-52 | -8.615850e-47 |
| Msa0060690 | Msa0565180 | 0.819475 | 1.138966e-52 | -8.615850e-47 |
| Msa0060690 | Msa0597180 | 0.816848 | 4.475548e-52 | -8.615850e-47 |
| Msa0060690 | Msa0615200 | 0.816593 | 5.104733e-52 | -8.615850e-47 |
| Msa0060690 | Msa0657340 | 0.800832 | 1.197797e-48 | -8.615850e-47 |
| Msa0060690 | Msa0682110 | 0.834692 | 2.588011e-56 | -8.615850e-47 |
| Msa0060690 | Msa0682160 | 0.836612 | 8.449459e-57 | -8.615850e-47 |
| Msa0060690 | Msa0698280 | 0.824512 | 7.754665e-54 | -8.615850e-47 |
| Msa0060690 | Msa0701430 | 0.804262 | 2.350531e-49 | -8.615850e-47 |
| Msa0060690 | Msa0712880 | 0.842469 | 2.538038e-58 | -8.615850e-47 |
| Msa0060690 | Msa0725580 | 0.848270 | 6.822528e-60 | -8.615850e-47 |
| Msa0060690 | Msa0744640 | 0.805472 | 1.313360e-49 | -8.615850e-47 |
| Msa0060690 | Msa0804860 | 0.828502 | 8.676710e-55 | -8.615850e-47 |
| Msa0060690 | Msa0829990 | 0.819467 | 1.143579e-52 | -8.615850e-47 |
| Msa0060690 | Msa0841730 | 0.804445 | 2.153171e-49 | -8.615850e-47 |
| Msa0060690 | Msa0848010 | 0.831434 | 1.673153e-55 | -8.615850e-47 |
| Msa0060690 | Msa0873880 | 0.810017 | 1.420796e-50 | -8.615850e-47 |
| Msa0060690 | Msa0873910 | 0.810313 | 1.226650e-50 | -8.615850e-47 |
| Msa0060690 | Msa0905570 | 0.826500 | 2.622550e-54 | -8.615850e-47 |
| Msa0060690 | Msa0906680 | 0.811304 | 7.485428e-51 | -8.615850e-47 |
| Msa0060690 | Msa0909040 | 0.800463 | 1.424688e-48 | -8.615850e-47 |
| Msa0060690 | Msa0974710 | 0.806536 | 7.843799e-50 | -8.615850e-47 |
| Msa0060690 | Msa0975950 | 0.807404 | 5.139163e-50 | -8.615850e-47 |
| Msa0060690 | Msa0975960 | 0.830689 | 2.549923e-55 | -8.615850e-47 |
| Msa0060690 | Msa1001120 | 0.815501 | 8.951556e-52 | -8.615850e-47 |
| Msa0060690 | Msa1035050 | 0.815506 | 8.929653e-52 | -8.615850e-47 |
| Msa0060690 | Msa1062060 | 0.820739 | 5.851228e-53 | -8.615850e-47 |
| Msa0060690 | Msa1071350 | 0.813450 | 2.543998e-51 | -8.615850e-47 |
| Msa0060690 | Msa1075090 | 0.823165 | 1.603777e-53 | -8.615850e-47 |
| Msa0060690 | Msa1095590 | 0.839562 | 1.470806e-57 | -8.615850e-47 |
| Msa0060690 | Msa1108560 | 0.823834 | 1.119166e-53 | -8.615850e-47 |
| Msa0060690 | Msa1114670 | 0.809789 | 1.590944e-50 | -8.615850e-47 |
| Msa0060690 | Msa1115980 | 0.824461 | 7.973483e-54 | -8.615850e-47 |
| Msa0060690 | Msa1136630 | 0.828535 | 8.517876e-55 | -8.615850e-47 |
| Msa0060690 | Msa1136760 | 0.814439 | 1.539655e-51 | -8.615850e-47 |
| Msa0060690 | Msa1142390 | 0.832909 | 7.220412e-56 | -8.615850e-47 |
| Msa0060690 | Msa1143260 | 0.809965 | 1.458033e-50 | -8.615850e-47 |
| Msa0060690 | Msa1167310 | 0.802724 | 4.896753e-49 | -8.615850e-47 |
| Msa0060690 | Msa1174280 | 0.807881 | 4.069058e-50 | -8.615850e-47 |
| Msa0060690 | Msa1185270 | 0.802153 | 6.422163e-49 | -8.615850e-47 |
| Msa0060690 | Msa1187480 | 0.807991 | 3.856279e-50 | -8.615850e-47 |
| Msa0060690 | Msa1202110 | 0.830355 | 3.077101e-55 | -8.615850e-47 |
| Msa0060690 | Msa1202470 | 0.812232 | 4.702405e-51 | -8.615850e-47 |
| Msa0060690 | Msa1202800 | 0.842338 | 2.748095e-58 | -8.615850e-47 |
| Msa0060690 | Msa1203810 | 0.802980 | 4.337260e-49 | -8.615850e-47 |
| Msa0060690 | Msa1205770 | 0.839893 | 1.206780e-57 | -8.615850e-47 |
| Msa0060690 | Msa1205810 | 0.825935 | 3.572738e-54 | -8.615850e-47 |
| Msa0060690 | Msa1215740 | 0.806554 | 7.773582e-50 | -8.615850e-47 |
| Msa0060690 | Msa1254870 | 0.825307 | 5.034894e-54 | -8.615850e-47 |
| Msa0060690 | Msa1254910 | 0.827247 | 1.738372e-54 | -8.615850e-47 |
| Msa0060690 | Msa1255210 | 0.824885 | 6.334732e-54 | -8.615850e-47 |
| Msa0060690 | Msa1284020 | 0.819490 | 1.130251e-52 | -8.615850e-47 |
| Msa0060690 | Msa1295650 | 0.830936 | 2.217964e-55 | -8.615850e-47 |
| Msa0060690 | Msa1307530 | 0.800101 | 1.687955e-48 | -8.615850e-47 |
| Msa0060690 | Msa1323070 | 0.807369 | 5.228950e-50 | -8.615850e-47 |
| Msa0060690 | Msa1328430 | 0.826618 | 2.456926e-54 | -8.615850e-47 |
| Msa0060690 | Msa1332420 | 0.802621 | 5.143263e-49 | -8.615850e-47 |
| Msa0060690 | Msa1340440 | 0.803354 | 3.627888e-49 | -8.615850e-47 |
| Msa0060690 | Msa1343280 | 0.803266 | 3.784149e-49 | -8.615850e-47 |
| Msa0060690 | Msa1398140 | 0.815366 | 9.592093e-52 | -8.615850e-47 |
| Msa0060690 | Msa1439250 | 0.805402 | 1.358133e-49 | -8.615850e-47 |
| Msa0060690 | Msa1455200 | 0.814088 | 1.841281e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060690 | MtrunA17_Chr1g0160381 | 89.610 | 154 | 16 | 0 | 128 | 281 | 4 | 157 | 1.78e-95 | 278 |
| Msa0060690 | MtrunA17_Chr1g0160381 | 64.744 | 156 | 42 | 4 | 1 | 147 | 5 | 156 | 5.61e-63 | 195 |
| Msa0060690 | MtrunA17_Chr1g0160371 | 84.106 | 151 | 24 | 0 | 131 | 281 | 3 | 153 | 1.17e-89 | 263 |
| Msa0060690 | MtrunA17_Chr1g0160371 | 68.276 | 145 | 33 | 4 | 1 | 136 | 1 | 141 | 2.10e-61 | 191 |
| Msa0060690 | MtrunA17_Chr1g0160391 | 57.143 | 147 | 58 | 2 | 137 | 278 | 9 | 155 | 1.30e-54 | 174 |
| Msa0060690 | MtrunA17_Chr1g0160391 | 55.844 | 154 | 52 | 2 | 1 | 141 | 1 | 151 | 4.32e-50 | 162 |
| Msa0060690 | MtrunA17_Chr1g0160351 | 79.348 | 92 | 19 | 0 | 190 | 281 | 3 | 94 | 9.73e-47 | 151 |
| Msa0060690 | MtrunA17_Chr1g0160351 | 77.647 | 85 | 10 | 2 | 68 | 143 | 5 | 89 | 8.10e-35 | 121 |
| Msa0060690 | MtrunA17_Chr8g0355781 | 40.000 | 145 | 84 | 2 | 137 | 280 | 9 | 151 | 5.87e-33 | 118 |
| Msa0060690 | MtrunA17_Chr8g0355781 | 37.908 | 153 | 79 | 6 | 1 | 143 | 1 | 147 | 6.58e-26 | 100 |
| Msa0060690 | MtrunA17_Chr8g0355721 | 40.000 | 145 | 84 | 2 | 137 | 280 | 9 | 151 | 8.14e-33 | 118 |
| Msa0060690 | MtrunA17_Chr8g0355721 | 37.580 | 157 | 82 | 5 | 1 | 147 | 1 | 151 | 3.59e-25 | 98.2 |
| Msa0060690 | MtrunA17_Chr8g0355811 | 38.621 | 145 | 85 | 3 | 137 | 280 | 9 | 150 | 6.65e-32 | 115 |
| Msa0060690 | MtrunA17_Chr8g0355811 | 35.032 | 157 | 85 | 6 | 1 | 147 | 1 | 150 | 1.66e-22 | 91.3 |
| Msa0060690 | MtrunA17_Chr8g0355661 | 39.310 | 145 | 84 | 3 | 137 | 280 | 9 | 150 | 1.15e-31 | 115 |
| Msa0060690 | MtrunA17_Chr8g0355661 | 36.646 | 161 | 85 | 6 | 1 | 151 | 1 | 154 | 2.45e-23 | 93.2 |
| Msa0060690 | MtrunA17_Chr8g0355771 | 38.621 | 145 | 85 | 3 | 137 | 280 | 9 | 150 | 1.40e-31 | 114 |
| Msa0060690 | MtrunA17_Chr8g0355771 | 34.783 | 161 | 88 | 7 | 1 | 151 | 1 | 154 | 1.78e-21 | 88.2 |
| Msa0060690 | MtrunA17_Chr8g0355821 | 37.931 | 145 | 86 | 3 | 137 | 280 | 9 | 150 | 1.80e-31 | 114 |
| Msa0060690 | MtrunA17_Chr8g0355821 | 33.987 | 153 | 84 | 6 | 1 | 143 | 1 | 146 | 7.82e-21 | 86.7 |
| Msa0060690 | MtrunA17_Chr8g0355761 | 36.552 | 145 | 89 | 2 | 137 | 280 | 9 | 151 | 4.69e-31 | 113 |
| Msa0060690 | MtrunA17_Chr8g0355761 | 37.580 | 157 | 82 | 5 | 1 | 147 | 1 | 151 | 1.03e-26 | 102 |
| Msa0060690 | MtrunA17_Chr8g0355741 | 37.671 | 146 | 88 | 2 | 137 | 281 | 9 | 152 | 1.58e-30 | 112 |
| Msa0060690 | MtrunA17_Chr8g0355741 | 36.601 | 153 | 81 | 5 | 1 | 143 | 1 | 147 | 1.05e-22 | 91.7 |
| Msa0060690 | MtrunA17_Chr8g0355791 | 37.241 | 145 | 87 | 3 | 137 | 280 | 9 | 150 | 3.24e-30 | 111 |
| Msa0060690 | MtrunA17_Chr8g0355791 | 34.161 | 161 | 89 | 7 | 1 | 151 | 1 | 154 | 1.06e-20 | 86.3 |
| Msa0060690 | MtrunA17_Chr8g0355801 | 36.552 | 145 | 88 | 3 | 137 | 280 | 9 | 150 | 1.32e-29 | 109 |
| Msa0060690 | MtrunA17_Chr8g0355801 | 32.298 | 161 | 92 | 7 | 1 | 151 | 1 | 154 | 2.02e-19 | 82.8 |
| Msa0060690 | MtrunA17_Chr8g0355641 | 39.041 | 146 | 86 | 2 | 137 | 281 | 9 | 152 | 2.90e-29 | 108 |
| Msa0060690 | MtrunA17_Chr8g0355641 | 38.562 | 153 | 78 | 5 | 1 | 143 | 1 | 147 | 7.78e-23 | 92.0 |
| Msa0060690 | MtrunA17_Chr8g0339261 | 35.172 | 145 | 90 | 3 | 138 | 281 | 12 | 153 | 8.08e-25 | 97.1 |
| Msa0060690 | MtrunA17_Chr8g0339261 | 33.824 | 136 | 77 | 3 | 1 | 126 | 1 | 133 | 1.32e-19 | 83.2 |
| Msa0060690 | MtrunA17_Chr1g0160801 | 36.986 | 146 | 82 | 5 | 137 | 280 | 9 | 146 | 3.15e-24 | 95.5 |
| Msa0060690 | MtrunA17_Chr1g0160801 | 34.783 | 138 | 79 | 5 | 1 | 133 | 1 | 132 | 9.68e-17 | 75.5 |
| Msa0060690 | MtrunA17_Chr5g0413971 | 30.201 | 149 | 92 | 3 | 1 | 141 | 3 | 147 | 1.39e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060690 | AT1G70850.3 | 31.429 | 315 | 174 | 8 | 2 | 281 | 8 | 315 | 2.73e-50 | 168 |
| Msa0060690 | AT1G70850.1 | 31.429 | 315 | 174 | 8 | 2 | 281 | 8 | 315 | 2.73e-50 | 168 |
| Msa0060690 | AT1G70830.1 | 30.841 | 321 | 174 | 7 | 2 | 281 | 21 | 334 | 7.60e-48 | 162 |
| Msa0060690 | AT1G70830.4 | 29.880 | 251 | 131 | 6 | 72 | 281 | 41 | 287 | 1.90e-33 | 124 |
| Msa0060690 | AT1G70830.4 | 34.667 | 150 | 83 | 4 | 2 | 141 | 136 | 280 | 5.60e-21 | 90.5 |
| Msa0060690 | AT1G70830.4 | 36.458 | 96 | 58 | 2 | 187 | 281 | 32 | 125 | 6.17e-13 | 68.2 |
| Msa0060690 | AT5G28010.1 | 37.580 | 157 | 94 | 3 | 127 | 281 | 11 | 165 | 6.24e-28 | 105 |
| Msa0060690 | AT5G28010.1 | 35.333 | 150 | 82 | 4 | 2 | 141 | 14 | 158 | 4.29e-22 | 90.5 |
| Msa0060690 | AT5G28010.2 | 37.580 | 157 | 94 | 3 | 127 | 281 | 11 | 165 | 6.24e-28 | 105 |
| Msa0060690 | AT5G28010.2 | 35.333 | 150 | 82 | 4 | 2 | 141 | 14 | 158 | 4.29e-22 | 90.5 |
| Msa0060690 | AT1G70890.1 | 36.735 | 147 | 89 | 3 | 137 | 281 | 13 | 157 | 1.08e-27 | 105 |
| Msa0060690 | AT1G70890.1 | 33.333 | 150 | 85 | 3 | 2 | 141 | 6 | 150 | 1.40e-22 | 91.7 |
| Msa0060690 | AT1G70830.2 | 28.634 | 227 | 117 | 5 | 2 | 188 | 21 | 242 | 6.48e-27 | 105 |
| Msa0060690 | AT1G70830.2 | 35.811 | 148 | 91 | 3 | 136 | 281 | 27 | 172 | 4.95e-25 | 100 |
| Msa0060690 | AT1G70850.2 | 28.959 | 221 | 118 | 6 | 2 | 188 | 8 | 223 | 6.95e-27 | 105 |
| Msa0060690 | AT1G70850.2 | 32.877 | 146 | 94 | 3 | 136 | 279 | 14 | 157 | 1.61e-22 | 93.6 |
| Msa0060690 | AT1G70840.1 | 34.247 | 146 | 92 | 3 | 138 | 281 | 27 | 170 | 5.40e-26 | 101 |
| Msa0060690 | AT1G70840.1 | 32.667 | 150 | 86 | 4 | 2 | 141 | 19 | 163 | 2.27e-20 | 86.3 |
| Msa0060690 | AT1G70830.5 | 35.811 | 148 | 91 | 3 | 136 | 281 | 27 | 172 | 6.38e-26 | 100 |
| Msa0060690 | AT1G70830.5 | 32.667 | 150 | 86 | 3 | 2 | 141 | 21 | 165 | 6.06e-21 | 87.8 |
| Msa0060690 | AT1G70830.3 | 35.811 | 148 | 91 | 3 | 136 | 281 | 27 | 172 | 1.20e-25 | 100 |
| Msa0060690 | AT1G70830.3 | 32.667 | 150 | 86 | 3 | 2 | 141 | 21 | 165 | 1.73e-20 | 87.4 |
| Msa0060690 | AT5G28000.1 | 31.902 | 163 | 107 | 3 | 121 | 281 | 3 | 163 | 5.61e-23 | 92.8 |
| Msa0060690 | AT5G28000.1 | 31.333 | 150 | 88 | 4 | 2 | 141 | 12 | 156 | 1.78e-16 | 75.5 |
| Msa0060690 | AT1G70880.1 | 31.724 | 145 | 95 | 3 | 139 | 281 | 16 | 158 | 8.05e-22 | 89.7 |
| Msa0060690 | AT1G70880.1 | 28.276 | 145 | 89 | 3 | 2 | 136 | 7 | 146 | 2.23e-15 | 72.4 |
| Msa0060690 | AT1G35260.1 | 30.263 | 152 | 101 | 3 | 130 | 279 | 1 | 149 | 3.29e-21 | 87.8 |
| Msa0060690 | AT1G35260.1 | 26.712 | 146 | 89 | 6 | 7 | 141 | 6 | 144 | 1.75e-11 | 61.6 |
| Msa0060690 | AT1G23130.1 | 26.623 | 154 | 110 | 2 | 129 | 281 | 8 | 159 | 3.74e-21 | 87.8 |
| Msa0060690 | AT1G23130.1 | 28.276 | 145 | 88 | 4 | 2 | 136 | 9 | 147 | 3.48e-13 | 66.2 |
| Msa0060690 | AT1G70870.1 | 37.063 | 143 | 76 | 5 | 138 | 280 | 10 | 138 | 2.44e-20 | 85.1 |
| Msa0060690 | AT1G23120.2 | 29.444 | 180 | 116 | 4 | 107 | 281 | 24 | 197 | 1.49e-18 | 82.0 |
| Msa0060690 | AT1G23120.1 | 31.250 | 144 | 93 | 3 | 138 | 281 | 10 | 147 | 1.49e-18 | 80.9 |
| Msa0060690 | AT1G14930.1 | 33.793 | 145 | 92 | 3 | 137 | 280 | 9 | 150 | 3.60e-18 | 79.7 |
| Msa0060690 | AT1G14930.1 | 32.168 | 143 | 82 | 4 | 1 | 134 | 1 | 137 | 4.51e-12 | 63.2 |
| Msa0060690 | AT1G35310.1 | 30.282 | 142 | 95 | 3 | 141 | 281 | 12 | 150 | 6.66e-17 | 76.3 |
| Msa0060690 | AT1G14950.1 | 28.966 | 145 | 99 | 3 | 137 | 280 | 9 | 150 | 4.89e-15 | 71.2 |
| Msa0060690 | AT4G14060.1 | 28.966 | 145 | 99 | 3 | 137 | 280 | 9 | 150 | 8.93e-15 | 70.5 |
| Msa0060690 | AT2G01520.1 | 28.276 | 145 | 100 | 3 | 137 | 280 | 9 | 150 | 8.70e-14 | 67.8 |
| Msa0060690 | AT1G14940.1 | 28.472 | 144 | 99 | 3 | 137 | 279 | 9 | 149 | 9.38e-13 | 65.1 |
| Msa0060690 | AT1G14960.1 | 30.070 | 143 | 85 | 4 | 1 | 134 | 1 | 137 | 2.20e-12 | 63.9 |
| Msa0060690 | AT1G14960.1 | 26.897 | 145 | 102 | 3 | 137 | 280 | 9 | 150 | 3.61e-11 | 60.8 |
| Msa0060690 | AT1G30990.1 | 26.389 | 144 | 101 | 3 | 137 | 279 | 9 | 148 | 6.59e-12 | 62.8 |
| Msa0060690 | AT1G30990.1 | 28.276 | 145 | 88 | 4 | 1 | 136 | 1 | 138 | 3.30e-11 | 60.8 |
| Msa0060690 | AT2G01530.1 | 28.276 | 145 | 100 | 3 | 137 | 280 | 9 | 150 | 1.16e-11 | 62.0 |
| Msa0060690 | AT1G24020.1 | 28.358 | 134 | 86 | 2 | 1 | 126 | 1 | 132 | 1.38e-11 | 62.0 |
| Msa0060690 | AT1G24020.2 | 28.358 | 134 | 86 | 2 | 1 | 126 | 1 | 132 | 1.38e-11 | 62.0 |
| Msa0060690 | AT3G26450.1 | 27.815 | 151 | 95 | 4 | 1 | 142 | 1 | 146 | 1.77e-11 | 61.6 |
Find 59 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATTTCTGTAGAGATATT+AGG | 0.262897 | 1_2:-18463990 | None:intergenic |
| TGAGAGTTACAAGAGTTTAA+AGG | 0.277371 | 1_2:+18465421 | Msa0060690:CDS |
| TGTACTTCTGTGGTGATATT+AGG | 0.304651 | 1_2:-18470490 | None:intergenic |
| TGAGAGTTACAAGAGTTTAA+AGG | 0.313337 | 1_2:+18471106 | Msa0060690:CDS |
| TCCATATCCTGATTCATTCT+TGG | 0.323038 | 1_2:+18465531 | Msa0060690:CDS |
| ATGGTGGTGGGATTGTTAAA+TGG | 0.324878 | 1_2:+18471156 | Msa0060690:CDS |
| TCCAAGAATGAATCAGGATA+TGG | 0.369726 | 1_2:-18465532 | None:intergenic |
| GCAAATTCCAAGAATGAATC+AGG | 0.396630 | 1_2:-18465538 | None:intergenic |
| AAACTAAAGGAGGATATTAC+AGG | 0.410116 | 1_2:+18465508 | Msa0060690:CDS |
| AAACACTGGGAATGTACATT+AGG | 0.411761 | 1_2:+18464062 | Msa0060690:CDS |
| GAAGGTGACTGGGAAAATAT+TGG | 0.418929 | 1_2:+18470529 | Msa0060690:CDS |
| AAGCTAAAGGAGGAAATTAC+AGG | 0.424947 | 1_2:+18471194 | Msa0060690:CDS |
| GCAAGGTCCAAGTATGAATC+AGG | 0.441032 | 1_2:-18471224 | None:intergenic |
| ATTACATACAGTGTCTTTGA+TGG | 0.445341 | 1_2:+18465389 | Msa0060690:CDS |
| TAGAGTGCATGAAGGTGATT+GGG | 0.452844 | 1_2:+18464022 | Msa0060690:CDS |
| GTAGAGTGCATGAAGGTGAT+TGG | 0.455183 | 1_2:+18464021 | Msa0060690:CDS |
| AACATGGTGGGTTTGTGAAA+TGG | 0.469728 | 1_2:+18465470 | Msa0060690:CDS |
| TGGTGGTGGGATTGTTAAAT+GGG | 0.470252 | 1_2:+18471157 | Msa0060690:CDS |
| ATTCTTGGAATTTGCTGCAA+AGG | 0.478866 | 1_2:+18465546 | Msa0060690:CDS |
| AGCAGAGAAATGGCTTTAAG+TGG | 0.497628 | 1_2:+18463888 | None:intergenic |
| ATACTTGGACCTTGCTGTGA+AGG | 0.503938 | 1_2:+18471232 | Msa0060690:CDS |
| AATGGCTTTAAGTGGGAAAG+TGG | 0.510488 | 1_2:+18463896 | None:intergenic |
| TGTATCTCCTGATTCATACT+TGG | 0.511390 | 1_2:+18471217 | Msa0060690:CDS |
| CAGTGTCTTTGATGGGGAAG+TGG | 0.513835 | 1_2:+18465397 | Msa0060690:CDS |
| TTACATACAGTGTCTTTGAT+GGG | 0.516463 | 1_2:+18465390 | Msa0060690:CDS |
| GTAGAGTGCATGAAGGTGAC+TGG | 0.523294 | 1_2:+18470518 | Msa0060690:CDS |
| ATTCATAAAGAACATGGTGG+TGG | 0.537340 | 1_2:+18471143 | Msa0060690:CDS |
| ATATTGGTTCTATCAAGCAC+TGG | 0.538736 | 1_2:+18470545 | Msa0060690:CDS |
| ATGTTGGGTCTGTTAAACAC+TGG | 0.558298 | 1_2:+18464048 | Msa0060690:CDS |
| GAAGGTGATTGGGAAAATGT+TGG | 0.560851 | 1_2:+18464032 | Msa0060690:CDS |
| AAGGTGATTGGGAAAATGTT+GGG | 0.567473 | 1_2:+18464033 | Msa0060690:CDS |
| TGTTGGGTCTGTTAAACACT+GGG | 0.569968 | 1_2:+18464049 | Msa0060690:CDS |
| TTCATAAAGAACATGGTGGT+GGG | 0.570285 | 1_2:+18471144 | Msa0060690:CDS |
| AATATCACCACAGAAGTACA+TGG | 0.570466 | 1_2:+18470493 | Msa0060690:CDS |
| TATTGGTTCTATCAAGCACT+GGG | 0.594586 | 1_2:+18470546 | Msa0060690:CDS |
| TCTACCTCCATGTACTTCTG+TGG | 0.594643 | 1_2:-18470500 | None:intergenic |
| ATATTATAGAACTTAGCAGT+AGG | 0.598993 | 1_2:-18463942 | None:intergenic |
| CAAGTGATTGATAAGGAACA+TGG | 0.604255 | 1_2:+18465454 | Msa0060690:intron |
| TAGAGTGCATGAAGGTGACT+GGG | 0.605256 | 1_2:+18470519 | Msa0060690:CDS |
| CAAGTGATTCATAAAGAACA+TGG | 0.605539 | 1_2:+18471137 | Msa0060690:CDS |
| TATTGATTCTCATCTTGTCA+AGG | 0.605627 | 1_2:+18471265 | Msa0060690:CDS |
| ATACGAATATGAGAAGCTAA+AGG | 0.610623 | 1_2:+18471181 | Msa0060690:CDS |
| TACATACAGTGTCTTTGATG+GGG | 0.614300 | 1_2:+18465391 | Msa0060690:CDS |
| ATTTGAGTATGAGAAACTAA+AGG | 0.615624 | 1_2:+18465495 | Msa0060690:CDS |
| TCTACAGAAATAGTGCATGA+AGG | 0.618856 | 1_2:+18463999 | Msa0060690:CDS |
| AAGCACTGGGAATTTACAGT+AGG | 0.622307 | 1_2:+18470559 | Msa0060690:CDS |
| GCAGAGAAATGGCTTTAAGT+GGG | 0.628837 | 1_2:+18463889 | None:intergenic |
| AGTGTCTTTGATGGGGAAGT+GGG | 0.629185 | 1_2:+18465398 | Msa0060690:CDS |
| CGAATATGAGAAGCTAAAGG+AGG | 0.640547 | 1_2:+18471184 | Msa0060690:CDS |
| GTCTATAGATGATGACAACA+AGG | 0.650407 | 1_2:+18465364 | Msa0060690:CDS |
| TGATTGATAAGGAACATGGT+GGG | 0.655901 | 1_2:+18465458 | Msa0060690:intron |
| CATGGAGGTAGAGTGCATGA+AGG | 0.659264 | 1_2:+18470511 | Msa0060690:CDS |
| GAAGTAGAGATTCAAGCACC+TGG | 0.664321 | 1_2:+18470424 | Msa0060690:CDS |
| GTGATTGATAAGGAACATGG+TGG | 0.677899 | 1_2:+18465457 | Msa0060690:intron |
| ATATTATAGAACTTAGCACC+AGG | 0.680852 | 1_2:-18470442 | None:intergenic |
| TGAGTATGAGAAACTAAAGG+AGG | 0.689098 | 1_2:+18465498 | Msa0060690:CDS |
| CATGAAGGTAGAGTGCATGA+AGG | 0.708400 | 1_2:+18464014 | Msa0060690:CDS |
| GTGATTCATAAAGAACATGG+TGG | 0.735641 | 1_2:+18471140 | Msa0060690:CDS |
| ATCACCACAGAAGTACATGG+AGG | 0.776492 | 1_2:+18470496 | Msa0060690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATATATTTTTTTTTTT+GGG | + | chr1_2:18465029-18465048 | Msa0060690:intron | 0.0% |
| !!! | AAATAATTTTATAATATTTA+TGG | - | chr1_2:18468908-18468927 | None:intergenic | 0.0% |
| !!! | AATGATTTTTACTTATATTT+TGG | + | chr1_2:18465128-18465147 | Msa0060690:intron | 10.0% |
| !!! | TTTTATATATACTATTAACA+TGG | - | chr1_2:18466001-18466020 | None:intergenic | 10.0% |
| !! | TGTTAATAGTATATATAAAA+CGG | + | chr1_2:18466001-18466020 | Msa0060690:intron | 10.0% |
| !! | TTTAATCCATAAATAAAATT+AGG | - | chr1_2:18467503-18467522 | None:intergenic | 10.0% |
| !! | TCAATTAATCATATAAAATT+TGG | - | chr1_2:18468106-18468125 | None:intergenic | 10.0% |
| !!! | TTTTATATGATTAATTGATA+AGG | + | chr1_2:18468108-18468127 | Msa0060690:intron | 10.0% |
| !! | TAAAGTAGTAATATTAATTA+GGG | + | chr1_2:18468958-18468977 | Msa0060690:intron | 10.0% |
| !!! | GAAAAAAATATATTCTAAAA+TGG | - | chr1_2:18469233-18469252 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTTTTTTACGT+TGG | + | chr1_2:18470919-18470938 | Msa0060690:intron | 10.0% |
| !! | GAAAATAAATAAATAGAAAT+TGG | - | chr1_2:18470948-18470967 | None:intergenic | 10.0% |
| !!! | CTTCAAATTATTATTTCTTT+TGG | + | chr1_2:18464209-18464228 | Msa0060690:intron | 15.0% |
| !!! | GTATTGAAAATGTTTTTTTA+GGG | - | chr1_2:18464526-18464545 | None:intergenic | 15.0% |
| !!! | AGTATTGAAAATGTTTTTTT+AGG | - | chr1_2:18464527-18464546 | None:intergenic | 15.0% |
| !! | TTGTATATTAGTAGAAAAAT+AGG | + | chr1_2:18464715-18464734 | Msa0060690:intron | 15.0% |
| !! | TGTATATTAGTAGAAAAATA+GGG | + | chr1_2:18464716-18464735 | Msa0060690:intron | 15.0% |
| !!! | AGTTTAATTTTATAATCTCA+AGG | - | chr1_2:18464919-18464938 | None:intergenic | 15.0% |
| !! | ATGATTTATATTTACTTGTA+TGG | + | chr1_2:18465061-18465080 | Msa0060690:intron | 15.0% |
| !!! | AAACTTTTATTTTTGGAATT+TGG | + | chr1_2:18465733-18465752 | Msa0060690:intron | 15.0% |
| !! | AAAGACAATAAGATAATATT+GGG | - | chr1_2:18465762-18465781 | None:intergenic | 15.0% |
| !! | TAAAGACAATAAGATAATAT+TGG | - | chr1_2:18465763-18465782 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATCATTGCAAA+TGG | - | chr1_2:18465868-18465887 | None:intergenic | 15.0% |
| !! | AAATGATAATCATGTTAAAA+TGG | + | chr1_2:18466042-18466061 | Msa0060690:intron | 15.0% |
| !! | AAGTAATATAATGTATTATG+TGG | + | chr1_2:18466717-18466736 | Msa0060690:intron | 15.0% |
| !!! | TGAATTATTGATAATGTTTA+GGG | - | chr1_2:18467349-18467368 | None:intergenic | 15.0% |
| !!! | ATGAATTATTGATAATGTTT+AGG | - | chr1_2:18467350-18467369 | None:intergenic | 15.0% |
| !!! | TTCTTTCCTAATTTTATTTA+TGG | + | chr1_2:18467494-18467513 | Msa0060690:intron | 15.0% |
| !! | AATAACAAAAACAAACAAAA+GGG | - | chr1_2:18467734-18467753 | None:intergenic | 15.0% |
| !!! | GTGTTTAAGTAATTATTTTT+AGG | + | chr1_2:18467881-18467900 | Msa0060690:intron | 15.0% |
| !!! | TTTTTTTGTCAAGTAAAATT+TGG | - | chr1_2:18468078-18468097 | None:intergenic | 15.0% |
| !! | TAAAAAAAGAGATTGAATTA+TGG | - | chr1_2:18468148-18468167 | None:intergenic | 15.0% |
| !! | GTTATTTGTTCTAATATTAT+AGG | - | chr1_2:18468287-18468306 | None:intergenic | 15.0% |
| !! | GTAAAGTAGTAATATTAATT+AGG | + | chr1_2:18468957-18468976 | Msa0060690:intron | 15.0% |
| !! | TTCAATAAATGCTTATAATT+AGG | + | chr1_2:18469079-18469098 | Msa0060690:intron | 15.0% |
| !! | TCAATAAATGCTTATAATTA+GGG | + | chr1_2:18469080-18469099 | Msa0060690:intron | 15.0% |
| !!! | CTTTTTAAGTATTTTTCTTT+TGG | + | chr1_2:18469163-18469182 | Msa0060690:intron | 15.0% |
| !!! | CTTATTTTAAGATAACTAAA+TGG | - | chr1_2:18469333-18469352 | None:intergenic | 15.0% |
| !! | AGAAAAAAAAACAATTTGAA+TGG | - | chr1_2:18469559-18469578 | None:intergenic | 15.0% |
| !! | ATATAAAAGAATATAGGTTT+AGG | - | chr1_2:18470348-18470367 | None:intergenic | 15.0% |
| !! | AGAGATATATAAAAGAATAT+AGG | - | chr1_2:18470354-18470373 | None:intergenic | 15.0% |
| !! | TATTCAAAGGAGATTATTAA+GGG | - | chr1_2:18464182-18464201 | None:intergenic | 20.0% |
| !! | TTATTCAAAGGAGATTATTA+AGG | - | chr1_2:18464183-18464202 | None:intergenic | 20.0% |
| !! | ATTGAAAATGACTTGAAATT+AGG | - | chr1_2:18464500-18464519 | None:intergenic | 20.0% |
| !!! | AACCGAAAATGTTTTTTTTA+GGG | + | chr1_2:18464823-18464842 | Msa0060690:intron | 20.0% |
| !! | AAGACAATAAGATAATATTG+GGG | - | chr1_2:18465761-18465780 | None:intergenic | 20.0% |
| !! | ATTAGTATTACCATTTAAGT+CGG | - | chr1_2:18466221-18466240 | None:intergenic | 20.0% |
| !!! | GTTTTAACCCAATTAATATA+GGG | - | chr1_2:18466246-18466265 | None:intergenic | 20.0% |
| !! | AAAGTATATTGTAAGATAAG+TGG | + | chr1_2:18466606-18466625 | Msa0060690:intron | 20.0% |
| !! | AAGTATATTGTAAGATAAGT+GGG | + | chr1_2:18466607-18466626 | Msa0060690:intron | 20.0% |
| !! | TAATATAATGTATTATGTGG+TGG | + | chr1_2:18466720-18466739 | Msa0060690:intron | 20.0% |
| !! | AATATAATGTATTATGTGGT+GGG | + | chr1_2:18466721-18466740 | Msa0060690:intron | 20.0% |
| !! | CTATTTAACAAATATGTCTT+TGG | + | chr1_2:18466885-18466904 | Msa0060690:intron | 20.0% |
| !! | GAATAACAAAAACAAACAAA+AGG | - | chr1_2:18467735-18467754 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTGGTTACAA+AGG | - | chr1_2:18467757-18467776 | None:intergenic | 20.0% |
| !! | AAAATGACATTATCTACTAT+GGG | - | chr1_2:18467779-18467798 | None:intergenic | 20.0% |
| !! | TAAAATGACATTATCTACTA+TGG | - | chr1_2:18467780-18467799 | None:intergenic | 20.0% |
| !!! | ATGAACTATTTAACTTGTTA+TGG | - | chr1_2:18468043-18468062 | None:intergenic | 20.0% |
| !!! | TATTTTTTTCTCTCTTCTTT+TGG | + | chr1_2:18469243-18469262 | Msa0060690:intron | 20.0% |
| !!! | GTTAATAGATAGTAATTTTG+TGG | + | chr1_2:18469431-18469450 | Msa0060690:intron | 20.0% |
| !! | AAAAAAACAATTTGAATGGA+TGG | - | chr1_2:18469555-18469574 | None:intergenic | 20.0% |
| !! | ACAGATTCGATTAATAAATT+TGG | + | chr1_2:18469765-18469784 | Msa0060690:intron | 20.0% |
| !! | ATTTCATCAATTTGAATGAA+TGG | + | chr1_2:18469949-18469968 | Msa0060690:intron | 20.0% |
| !!! | TTGCTTACATAATATTGATT+TGG | - | chr1_2:18470057-18470076 | None:intergenic | 20.0% |
| !! | ATATTATGTAAGCAAATCTT+TGG | + | chr1_2:18470062-18470081 | Msa0060690:intron | 20.0% |
| !! | TAGTAAAACTATGAAACATA+AGG | - | chr1_2:18470595-18470614 | None:intergenic | 20.0% |
| !! | AGTGTTTATAAATGACAATT+TGG | - | chr1_2:18470784-18470803 | None:intergenic | 20.0% |
| !!! | CATTTTCTTATAAAGAAACA+AGG | + | chr1_2:18470870-18470889 | Msa0060690:intron | 20.0% |
| !! | ATTAGAGTTCAATGATATTA+GGG | - | chr1_2:18470970-18470989 | None:intergenic | 20.0% |
| !! | AATTAGAGTTCAATGATATT+AGG | - | chr1_2:18470971-18470990 | None:intergenic | 20.0% |
| !!! | ATCATATATAGCATTTTTGA+TGG | + | chr1_2:18471074-18471093 | Msa0060690:CDS | 20.0% |
| ! | ATATTATAGAACTTAGCAGT+AGG | - | chr1_2:18463945-18463964 | None:intergenic | 25.0% |
| !!! | ACTATTTCTGTAGAGATATT+AGG | - | chr1_2:18463993-18464012 | None:intergenic | 25.0% |
| !! | TTGAAGATAGTGTTATTCAA+AGG | - | chr1_2:18464195-18464214 | None:intergenic | 25.0% |
| !! | GTTATTGTTGTATTTGTTGA+GGG | - | chr1_2:18464368-18464387 | None:intergenic | 25.0% |
| ! | TCAACAAATACAACAATAAC+CGG | + | chr1_2:18464368-18464387 | Msa0060690:intron | 25.0% |
| ! | TTAAGCTCAAAATTATGCAT+TGG | - | chr1_2:18464595-18464614 | None:intergenic | 25.0% |
| ! | TTCAAATAAGTCATCTATTG+CGG | + | chr1_2:18464769-18464788 | Msa0060690:intron | 25.0% |
| !!! | GAACCGAAAATGTTTTTTTT+AGG | + | chr1_2:18464822-18464841 | Msa0060690:intron | 25.0% |
| !! | CTCCCTAAAAAAAACATTTT+CGG | - | chr1_2:18464828-18464847 | None:intergenic | 25.0% |
| !!! | TTTTTTTTAGGGAGCAAAAA+GGG | + | chr1_2:18464834-18464853 | Msa0060690:intron | 25.0% |
| !! | CATTTTACAACTATTTCGAA+GGG | + | chr1_2:18464878-18464897 | Msa0060690:intron | 25.0% |
| !!! | TTACCATTGAACTTTTTTTG+AGG | + | chr1_2:18464940-18464959 | Msa0060690:intron | 25.0% |
| !!! | TACCATTGAACTTTTTTTGA+GGG | + | chr1_2:18464941-18464960 | Msa0060690:intron | 25.0% |
| ! | ATTTGAGTATGAGAAACTAA+AGG | + | chr1_2:18465495-18465514 | Msa0060690:CDS | 25.0% |
| !!! | TGCGAGTAAACTTTTATTTT+TGG | + | chr1_2:18465726-18465745 | Msa0060690:intron | 25.0% |
| ! | TCATTGCAAATGGTTAAAAT+GGG | - | chr1_2:18465858-18465877 | None:intergenic | 25.0% |
| ! | ATCATTGCAAATGGTTAAAA+TGG | - | chr1_2:18465859-18465878 | None:intergenic | 25.0% |
| ! | AATTACAAAACATTGTAAGC+TGG | + | chr1_2:18466089-18466108 | Msa0060690:intron | 25.0% |
| ! | ATGTTAACACTCATCTTAAA+AGG | - | chr1_2:18466196-18466215 | None:intergenic | 25.0% |
| ! | ACTAATGACCCTATATTAAT+TGG | + | chr1_2:18466235-18466254 | Msa0060690:intron | 25.0% |
| ! | CTAATGACCCTATATTAATT+GGG | + | chr1_2:18466236-18466255 | Msa0060690:intron | 25.0% |
| !!! | GGTTTTAACCCAATTAATAT+AGG | - | chr1_2:18466247-18466266 | None:intergenic | 25.0% |
| !! | TTAAAACCTATGAGACTTTT+TGG | + | chr1_2:18466259-18466278 | Msa0060690:intron | 25.0% |
| !! | TAAAACCTATGAGACTTTTT+GGG | + | chr1_2:18466260-18466279 | Msa0060690:intron | 25.0% |
| ! | AATTATGTCACAAATGCTTA+AGG | - | chr1_2:18466352-18466371 | None:intergenic | 25.0% |
| ! | AACTTCTTCCAAATGAAATT+TGG | - | chr1_2:18466387-18466406 | None:intergenic | 25.0% |
| ! | AAACTATGACACAAAAACAT+TGG | - | chr1_2:18466456-18466475 | None:intergenic | 25.0% |
| !! | GTTTTTGTGTCATAGTTTTT+TGG | + | chr1_2:18466458-18466477 | Msa0060690:intron | 25.0% |
| !!! | GTCATAGTTTTTTGGATAAT+TGG | + | chr1_2:18466466-18466485 | Msa0060690:intron | 25.0% |
| ! | ACATTTAGAAAATGTAGTTG+AGG | + | chr1_2:18466662-18466681 | Msa0060690:intron | 25.0% |
| !! | TAAGGTATCTAACAAATTGT+AGG | + | chr1_2:18466854-18466873 | Msa0060690:intron | 25.0% |
| !!! | GTATAGATAATGGAAATGTT+TGG | - | chr1_2:18467060-18467079 | None:intergenic | 25.0% |
| ! | AATACATCACACCAATAAAA+TGG | + | chr1_2:18467384-18467403 | Msa0060690:intron | 25.0% |
| ! | ATACATCACACCAATAAAAT+GGG | + | chr1_2:18467385-18467404 | Msa0060690:intron | 25.0% |
| !!! | CTCTTTTTTACCCATTTTAT+TGG | - | chr1_2:18467398-18467417 | None:intergenic | 25.0% |
| ! | CAATAAAATGGGTAAAAAAG+AGG | + | chr1_2:18467396-18467415 | Msa0060690:intron | 25.0% |
| !! | TAATTTGCAATTGACTTTCA+CGG | - | chr1_2:18467452-18467471 | None:intergenic | 25.0% |
| !!! | CTACTATGGGTTTTTTTTTT+TGG | - | chr1_2:18467766-18467785 | None:intergenic | 25.0% |
| ! | ATAGTGTTTGAATCACTATT+AGG | + | chr1_2:18468008-18468027 | Msa0060690:intron | 25.0% |
| !!! | TCTCTATTTCTAGTATGAAT+AGG | + | chr1_2:18468344-18468363 | Msa0060690:intron | 25.0% |
| ! | TTGCAATTATCAACAAAATG+AGG | + | chr1_2:18468372-18468391 | Msa0060690:intron | 25.0% |
| !!! | TTTTGACTAACTATATGACA+AGG | + | chr1_2:18468479-18468498 | Msa0060690:intron | 25.0% |
| ! | AATACAGATGACTCTTATAA+TGG | + | chr1_2:18468581-18468600 | Msa0060690:intron | 25.0% |
| ! | ATGACTCTTATAATGGTAAT+GGG | + | chr1_2:18468588-18468607 | Msa0060690:intron | 25.0% |
| ! | TGGTATGTGTATTATGTATA+TGG | + | chr1_2:18468668-18468687 | Msa0060690:intron | 25.0% |
| !!! | GTTTTAAAGTTGTAGAATTG+CGG | + | chr1_2:18468737-18468756 | Msa0060690:intron | 25.0% |
| ! | GCTGTCTTAAAAACAAAATT+GGG | + | chr1_2:18468980-18468999 | Msa0060690:intron | 25.0% |
| ! | CTGTCTTAAAAACAAAATTG+GGG | + | chr1_2:18468981-18469000 | Msa0060690:intron | 25.0% |
| !! | TTGAAAGATGACTTGTATTT+AGG | + | chr1_2:18469042-18469061 | Msa0060690:intron | 25.0% |
| !! | TGAAAGATGACTTGTATTTA+GGG | + | chr1_2:18469043-18469062 | Msa0060690:intron | 25.0% |
| !!! | TCTTTTGGAACAAAAACAAT+AGG | + | chr1_2:18469258-18469277 | Msa0060690:intron | 25.0% |
| !!! | CTTTTGGAACAAAAACAATA+GGG | + | chr1_2:18469259-18469278 | Msa0060690:intron | 25.0% |
| ! | TTGAGTATACTCATATTTCT+AGG | + | chr1_2:18469821-18469840 | Msa0060690:intron | 25.0% |
| ! | CAAAGTCGTTAAAATCAAAA+GGG | - | chr1_2:18469909-18469928 | None:intergenic | 25.0% |
| ! | TCAAAGTCGTTAAAATCAAA+AGG | - | chr1_2:18469910-18469929 | None:intergenic | 25.0% |
| ! | AGAATATATGAAAATGACGA+TGG | - | chr1_2:18470089-18470108 | None:intergenic | 25.0% |
| !! | ATTTTCATATTTTCTCGATC+TGG | + | chr1_2:18470221-18470240 | Msa0060690:intron | 25.0% |
| !! | TAGGTTTAGGTTATTCATAA+GGG | - | chr1_2:18470335-18470354 | None:intergenic | 25.0% |
| !! | ATAGGTTTAGGTTATTCATA+AGG | - | chr1_2:18470336-18470355 | None:intergenic | 25.0% |
| ! | GAATTTACAGTAGGTAATTA+AGG | + | chr1_2:18470568-18470587 | Msa0060690:intron | 25.0% |
| !! | ACTATTTTATTGCTCATGAA+AGG | + | chr1_2:18470611-18470630 | Msa0060690:intron | 25.0% |
| ! | GGTTATTGTTGTATTTGTTG+AGG | - | chr1_2:18464369-18464388 | None:intergenic | 30.0% |
| AAATACAACAATAACCGGAA+TGG | + | chr1_2:18464373-18464392 | Msa0060690:intron | 30.0% | |
| TCAACTGTGTCATGTATTAT+GGG | - | chr1_2:18464558-18464577 | None:intergenic | 30.0% | |
| ATCAACTGTGTCATGTATTA+TGG | - | chr1_2:18464559-18464578 | None:intergenic | 30.0% | |
| TCAAATAAGTCATCTATTGC+GGG | + | chr1_2:18464770-18464789 | Msa0060690:intron | 30.0% | |
| !!! | GTTTTTTTTAGGGAGCAAAA+AGG | + | chr1_2:18464833-18464852 | Msa0060690:intron | 30.0% |
| !!! | TTTTTTTAGGGAGCAAAAAG+GGG | + | chr1_2:18464835-18464854 | Msa0060690:intron | 30.0% |
| CCTTCGAAATAGTTGTAAAA+TGG | - | chr1_2:18464880-18464899 | None:intergenic | 30.0% | |
| ! | CCATTTTACAACTATTTCGA+AGG | + | chr1_2:18464877-18464896 | Msa0060690:intron | 30.0% |
| TTCCCTCAAAAAAAGTTCAA+TGG | - | chr1_2:18464946-18464965 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTTTTCCTTCTGCA+TGG | - | chr1_2:18465324-18465343 | None:intergenic | 30.0% |
| ATTACATACAGTGTCTTTGA+TGG | + | chr1_2:18465389-18465408 | Msa0060690:CDS | 30.0% | |
| TTACATACAGTGTCTTTGAT+GGG | + | chr1_2:18465390-18465409 | Msa0060690:CDS | 30.0% | |
| TGAGAGTTACAAGAGTTTAA+AGG | + | chr1_2:18465421-18465440 | Msa0060690:CDS | 30.0% | |
| CACATTACAAGTGATTGATA+AGG | + | chr1_2:18465447-18465466 | Msa0060690:intron | 30.0% | |
| AAACTAAAGGAGGATATTAC+AGG | + | chr1_2:18465508-18465527 | Msa0060690:CDS | 30.0% | |
| ! | ATATTGATGCTCATCTTTTC+AGG | + | chr1_2:18465578-18465597 | Msa0060690:intron | 30.0% |
| ! | TATTGATGCTCATCTTTTCA+GGG | + | chr1_2:18465579-18465598 | Msa0060690:intron | 30.0% |
| CAAAAGAAACTCTGTTGTAA+TGG | + | chr1_2:18465688-18465707 | Msa0060690:intron | 30.0% | |
| TCATTATCACTTGCGTAAAA+AGG | + | chr1_2:18465821-18465840 | Msa0060690:intron | 30.0% | |
| CATTATCACTTGCGTAAAAA+GGG | + | chr1_2:18465822-18465841 | Msa0060690:intron | 30.0% | |
| ATTATCACTTGCGTAAAAAG+GGG | + | chr1_2:18465823-18465842 | Msa0060690:intron | 30.0% | |
| CATTGCAAATGGTTAAAATG+GGG | - | chr1_2:18465857-18465876 | None:intergenic | 30.0% | |
| ATAACTCGCTTATAAAACCT+TGG | + | chr1_2:18466120-18466139 | Msa0060690:intron | 30.0% | |
| TTAACACTCATCTTAAAAGG+TGG | - | chr1_2:18466193-18466212 | None:intergenic | 30.0% | |
| ! | GTTAACATAACCGACTTAAA+TGG | + | chr1_2:18466208-18466227 | Msa0060690:intron | 30.0% |
| ! | AAAACCTATGAGACTTTTTG+GGG | + | chr1_2:18466261-18466280 | Msa0060690:intron | 30.0% |
| AAACCACTCCAAATTTCATT+TGG | + | chr1_2:18466376-18466395 | Msa0060690:intron | 30.0% | |
| !!! | GTTTTTTGGATAATTGGCAT+TGG | + | chr1_2:18466472-18466491 | Msa0060690:intron | 30.0% |
| ATACAAAGTCTGACAAGTAT+AGG | - | chr1_2:18466549-18466568 | None:intergenic | 30.0% | |
| TCTCAAACTAGAATTCGTTA+TGG | - | chr1_2:18466828-18466847 | None:intergenic | 30.0% | |
| ! | TCTAGTTTGAGATATGCTTA+AGG | + | chr1_2:18466836-18466855 | Msa0060690:intron | 30.0% |
| TTGTAAGTCTAGATCATTGA+TGG | - | chr1_2:18467010-18467029 | None:intergenic | 30.0% | |
| TAGTTGTATAAGAGCCATTA+GGG | - | chr1_2:18467137-18467156 | None:intergenic | 30.0% | |
| TTAGTTGTATAAGAGCCATT+AGG | - | chr1_2:18467138-18467157 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTCAAAGACTAAGT+TGG | - | chr1_2:18467211-18467230 | None:intergenic | 30.0% |
| !!! | TGGTTCTCAAATACTGATTT+TGG | - | chr1_2:18467228-18467247 | None:intergenic | 30.0% |
| !!! | CAACGTCATTTTTTTATCCA+CGG | - | chr1_2:18467313-18467332 | None:intergenic | 30.0% |
| ! | AATTTGCAATTGACTTTCAC+GGG | - | chr1_2:18467451-18467470 | None:intergenic | 30.0% |
| ATTAGGAAAGAAACTAAACC+TGG | - | chr1_2:18467486-18467505 | None:intergenic | 30.0% | |
| ATATAAGCAAGGAGATCATT+GGG | - | chr1_2:18467649-18467668 | None:intergenic | 30.0% | |
| TCAAGTAAAATTTGGTCTCA+TGG | - | chr1_2:18468070-18468089 | None:intergenic | 30.0% | |
| GAAAAAAAAAACCAACAAGC+TGG | - | chr1_2:18468187-18468206 | None:intergenic | 30.0% | |
| AGTAAGACTAACTGATTAGA+AGG | + | chr1_2:18468230-18468249 | Msa0060690:intron | 30.0% | |
| TCATACTAGAAATAGAGAAC+CGG | - | chr1_2:18468342-18468361 | None:intergenic | 30.0% | |
| CAATTATCAACAAAATGAGG+AGG | + | chr1_2:18468375-18468394 | Msa0060690:intron | 30.0% | |
| CGTGTGAATGTTTAATAGAT+TGG | + | chr1_2:18468528-18468547 | Msa0060690:intron | 30.0% | |
| GTGAATGTTTAATAGATTGG+AGG | + | chr1_2:18468531-18468550 | Msa0060690:intron | 30.0% | |
| GATGACTCTTATAATGGTAA+TGG | + | chr1_2:18468587-18468606 | Msa0060690:intron | 30.0% | |
| ! | TGACTCTTATAATGGTAATG+GGG | + | chr1_2:18468589-18468608 | Msa0060690:intron | 30.0% |
| TTATGTATATGGTAGAGCTT+TGG | + | chr1_2:18468679-18468698 | Msa0060690:intron | 30.0% | |
| TATGTATATGGTAGAGCTTT+GGG | + | chr1_2:18468680-18468699 | Msa0060690:intron | 30.0% | |
| !! | TATTGATTAGCTTCACGATA+GGG | - | chr1_2:18468829-18468848 | None:intergenic | 30.0% |
| !! | ATATTGATTAGCTTCACGAT+AGG | - | chr1_2:18468830-18468849 | None:intergenic | 30.0% |
| AGCTAATCAATATGTTGATG+TGG | + | chr1_2:18468837-18468856 | Msa0060690:intron | 30.0% | |
| GGCTGTCTTAAAAACAAAAT+TGG | + | chr1_2:18468979-18468998 | Msa0060690:intron | 30.0% | |
| !! | AAGTCATCTTTCAAGTTACT+AGG | - | chr1_2:18469036-18469055 | None:intergenic | 30.0% |
| TGATAGATCAAGAAGAAAAG+TGG | - | chr1_2:18469515-18469534 | None:intergenic | 30.0% | |
| ! | CAATTTGAATGGATGGTTTT+GGG | - | chr1_2:18469548-18469567 | None:intergenic | 30.0% |
| ! | ACAATTTGAATGGATGGTTT+TGG | - | chr1_2:18469549-18469568 | None:intergenic | 30.0% |
| TATGAGTATACTCAAGTCTA+TGG | - | chr1_2:18469816-18469835 | None:intergenic | 30.0% | |
| TCCATGTTAAAGACATGAAA+TGG | - | chr1_2:18469860-18469879 | None:intergenic | 30.0% | |
| TCCCAACTATCTTCTATTTA+AGG | + | chr1_2:18470298-18470317 | Msa0060690:intron | 30.0% | |
| CCCTTAAATAGAAGATAGTT+GGG | - | chr1_2:18470302-18470321 | None:intergenic | 30.0% | |
| CCCAACTATCTTCTATTTAA+GGG | + | chr1_2:18470299-18470318 | Msa0060690:intron | 30.0% | |
| TCCCTTAAATAGAAGATAGT+TGG | - | chr1_2:18470303-18470322 | None:intergenic | 30.0% | |
| ! | AGGTTTAGGTTATTCATAAG+GGG | - | chr1_2:18470334-18470353 | None:intergenic | 30.0% |
| ATATTATAGAACTTAGCACC+AGG | - | chr1_2:18470445-18470464 | None:intergenic | 30.0% | |
| ! | TAACTTCAACAAAAGAGTGT+TGG | - | chr1_2:18470698-18470717 | None:intergenic | 30.0% |
| ATGACAATTTGGACAATACA+AGG | - | chr1_2:18470773-18470792 | None:intergenic | 30.0% | |
| !! | TTTGTTTTCTTCCTTCTGTA+GGG | - | chr1_2:18471010-18471029 | None:intergenic | 30.0% |
| TGAGAGTTACAAGAGTTTAA+AGG | + | chr1_2:18465421-18465440 | Msa0060690:CDS | 30.0% | |
| CAAGTGATTCATAAAGAACA+TGG | + | chr1_2:18471137-18471156 | Msa0060690:CDS | 30.0% | |
| ATACGAATATGAGAAGCTAA+AGG | + | chr1_2:18471181-18471200 | Msa0060690:CDS | 30.0% | |
| !! | TATTGATTCTCATCTTGTCA+AGG | + | chr1_2:18471265-18471284 | Msa0060690:CDS | 30.0% |
| TCTACAGAAATAGTGCATGA+AGG | + | chr1_2:18463999-18464018 | Msa0060690:CDS | 35.0% | |
| AAGGTGATTGGGAAAATGTT+GGG | + | chr1_2:18464033-18464052 | Msa0060690:CDS | 35.0% | |
| AAACACTGGGAATGTACATT+AGG | + | chr1_2:18464062-18464081 | Msa0060690:CDS | 35.0% | |
| ! | AATGGTGGGAGTTAAAAGAT+TGG | + | chr1_2:18464391-18464410 | Msa0060690:intron | 35.0% |
| ! | ATGGTGGGAGTTAAAAGATT+GGG | + | chr1_2:18464392-18464411 | Msa0060690:intron | 35.0% |
| ATCATGAGATGCTAGTTCAA+TGG | - | chr1_2:18465011-18465030 | None:intergenic | 35.0% | |
| GTCTATAGATGATGACAACA+AGG | + | chr1_2:18465364-18465383 | Msa0060690:CDS | 35.0% | |
| TACATACAGTGTCTTTGATG+GGG | + | chr1_2:18465391-18465410 | Msa0060690:CDS | 35.0% | |
| CAAGTGATTGATAAGGAACA+TGG | + | chr1_2:18465454-18465473 | Msa0060690:intron | 35.0% | |
| TGATTGATAAGGAACATGGT+GGG | + | chr1_2:18465458-18465477 | Msa0060690:intron | 35.0% | |
| TGAGTATGAGAAACTAAAGG+AGG | + | chr1_2:18465498-18465517 | Msa0060690:CDS | 35.0% | |
| TCCATATCCTGATTCATTCT+TGG | + | chr1_2:18465531-18465550 | Msa0060690:CDS | 35.0% | |
| TCCAAGAATGAATCAGGATA+TGG | - | chr1_2:18465535-18465554 | None:intergenic | 35.0% | |
| GCAAATTCCAAGAATGAATC+AGG | - | chr1_2:18465541-18465560 | None:intergenic | 35.0% | |
| !! | ATTCTTGGAATTTGCTGCAA+AGG | + | chr1_2:18465546-18465565 | Msa0060690:CDS | 35.0% |
| AGATGAAGATGAAGTGTGTT+TGG | + | chr1_2:18465625-18465644 | Msa0060690:intron | 35.0% | |
| ! | AAATCAACCACAAGCGATTT+TGG | + | chr1_2:18466305-18466324 | Msa0060690:intron | 35.0% |
| CTTCCAAATGAAATTTGGAG+TGG | - | chr1_2:18466382-18466401 | None:intergenic | 35.0% | |
| ATACACATCGTCTGTCAAAA+TGG | + | chr1_2:18466415-18466434 | Msa0060690:intron | 35.0% | |
| TACACATCGTCTGTCAAAAT+GGG | + | chr1_2:18466416-18466435 | Msa0060690:intron | 35.0% | |
| !! | CTCCTCCAAAACTCTAAAAT+GGG | - | chr1_2:18466634-18466653 | None:intergenic | 35.0% |
| ! | ACTCCTCCAAAACTCTAAAA+TGG | - | chr1_2:18466635-18466654 | None:intergenic | 35.0% |
| !!! | ATTTTAGAGTTTTGGAGGAG+TGG | + | chr1_2:18466634-18466653 | Msa0060690:intron | 35.0% |
| !! | TAATGTATTATGTGGTGGGT+TGG | + | chr1_2:18466725-18466744 | Msa0060690:intron | 35.0% |
| GCAAAAAATAGCTACACCTA+AGG | + | chr1_2:18466747-18466766 | Msa0060690:intron | 35.0% | |
| ! | AATAGCTACACCTAAGGTTT+TGG | + | chr1_2:18466753-18466772 | Msa0060690:intron | 35.0% |
| ! | ATAGCTACACCTAAGGTTTT+GGG | + | chr1_2:18466754-18466773 | Msa0060690:intron | 35.0% |
| ! | GCTTTCATTAAGGATGGTTT+TGG | - | chr1_2:18466957-18466976 | None:intergenic | 35.0% |
| AGTGAAGCTTTCATTAAGGA+TGG | - | chr1_2:18466963-18466982 | None:intergenic | 35.0% | |
| TCCTTAATGAAAGCTTCACT+TGG | + | chr1_2:18466963-18466982 | Msa0060690:intron | 35.0% | |
| ACCAAGTGAAGCTTTCATTA+AGG | - | chr1_2:18466967-18466986 | None:intergenic | 35.0% | |
| AGGCAGTTGAGTATAGATAA+TGG | - | chr1_2:18467070-18467089 | None:intergenic | 35.0% | |
| ! | TGAGTATTGTGAACAACTTG+AGG | - | chr1_2:18467090-18467109 | None:intergenic | 35.0% |
| ! | ATTTTGTCTGACAACCCTAA+TGG | + | chr1_2:18467120-18467139 | Msa0060690:intron | 35.0% |
| TATTAACTCTTGCGACAAAG+AGG | + | chr1_2:18467169-18467188 | Msa0060690:intron | 35.0% | |
| CGTGGATAAAAAAATGACGT+TGG | + | chr1_2:18467311-18467330 | Msa0060690:intron | 35.0% | |
| CAAATTAAAAGATCACCTCC+AGG | + | chr1_2:18467465-18467484 | Msa0060690:intron | 35.0% | |
| ATGTCGTAAGGTGAAATTGT+GGG | - | chr1_2:18467539-18467558 | None:intergenic | 35.0% | |
| AATGTCGTAAGGTGAAATTG+TGG | - | chr1_2:18467540-18467559 | None:intergenic | 35.0% | |
| AAACCAATGCTCAGACTTTA+TGG | + | chr1_2:18467573-18467592 | Msa0060690:intron | 35.0% | |
| GATATAAGCAAGGAGATCAT+TGG | - | chr1_2:18467650-18467669 | None:intergenic | 35.0% | |
| ATGATCTCCTTGCTTATATC+AGG | + | chr1_2:18467650-18467669 | Msa0060690:intron | 35.0% | |
| CATCATTCCTGATATAAGCA+AGG | - | chr1_2:18467660-18467679 | None:intergenic | 35.0% | |
| ACTTGATATGAAAGCAAGTC+TGG | + | chr1_2:18468398-18468417 | Msa0060690:intron | 35.0% | |
| CTATTAAACATTCACACGAG+AGG | - | chr1_2:18468526-18468545 | None:intergenic | 35.0% | |
| !! | TCTTATAATGGTAATGGGGA+AGG | + | chr1_2:18468593-18468612 | Msa0060690:intron | 35.0% |
| ! | GGTGGCTTTGCAAAAAATAT+TGG | + | chr1_2:18468648-18468667 | Msa0060690:intron | 35.0% |
| ATGTATATGGTAGAGCTTTG+GGG | + | chr1_2:18468681-18468700 | Msa0060690:intron | 35.0% | |
| CTAAGTATTAGAGAAGAGAG+AGG | + | chr1_2:18469107-18469126 | Msa0060690:intron | 35.0% | |
| AAGACATTGTATTCGAAACG+TGG | + | chr1_2:18469404-18469423 | Msa0060690:intron | 35.0% | |
| ATCAAGAAGAAAAGTGGTGA+CGG | - | chr1_2:18469509-18469528 | None:intergenic | 35.0% | |
| ! | TTTGATTTCTCGTCTTAGTG+CGG | + | chr1_2:18469701-18469720 | Msa0060690:intron | 35.0% |
| ! | GTGCGGTGTTTATTTGATTT+AGG | + | chr1_2:18469718-18469737 | Msa0060690:intron | 35.0% |
| GCCATTTCATGTCTTTAACA+TGG | + | chr1_2:18469856-18469875 | Msa0060690:intron | 35.0% | |
| ! | GGTTTAGGTTATTCATAAGG+GGG | - | chr1_2:18470333-18470352 | None:intergenic | 35.0% |
| ATTATTCACGAGAAGAGACA+TGG | + | chr1_2:18470378-18470397 | Msa0060690:intron | 35.0% | |
| TGTACTTCTGTGGTGATATT+AGG | - | chr1_2:18470493-18470512 | None:intergenic | 35.0% | |
| ! | AATATCACCACAGAAGTACA+TGG | + | chr1_2:18470493-18470512 | Msa0060690:CDS | 35.0% |
| !! | ATATTGGTTCTATCAAGCAC+TGG | + | chr1_2:18470545-18470564 | Msa0060690:CDS | 35.0% |
| !! | TATTGGTTCTATCAAGCACT+GGG | + | chr1_2:18470546-18470565 | Msa0060690:CDS | 35.0% |
| !! | TTCAACAAAAGAGTGTTGGA+AGG | - | chr1_2:18470694-18470713 | None:intergenic | 35.0% |
| !!! | CTTTGTTTTCTTCCTTCTGT+AGG | - | chr1_2:18471011-18471030 | None:intergenic | 35.0% |
| ! | TAGCATTTTTGATGGAGAAG+TGG | + | chr1_2:18471082-18471101 | Msa0060690:CDS | 35.0% |
| ! | AGCATTTTTGATGGAGAAGT+GGG | + | chr1_2:18471083-18471102 | Msa0060690:CDS | 35.0% |
| GTGATTCATAAAGAACATGG+TGG | + | chr1_2:18471140-18471159 | Msa0060690:CDS | 35.0% | |
| ATTCATAAAGAACATGGTGG+TGG | + | chr1_2:18471143-18471162 | Msa0060690:CDS | 35.0% | |
| TTCATAAAGAACATGGTGGT+GGG | + | chr1_2:18471144-18471163 | Msa0060690:CDS | 35.0% | |
| AAGCTAAAGGAGGAAATTAC+AGG | + | chr1_2:18471194-18471213 | Msa0060690:CDS | 35.0% | |
| TGTATCTCCTGATTCATACT+TGG | + | chr1_2:18471217-18471236 | Msa0060690:CDS | 35.0% | |
| TAGAGTGCATGAAGGTGATT+GGG | + | chr1_2:18464022-18464041 | Msa0060690:CDS | 40.0% | |
| GAAGGTGATTGGGAAAATGT+TGG | + | chr1_2:18464032-18464051 | Msa0060690:CDS | 40.0% | |
| ATGTTGGGTCTGTTAAACAC+TGG | + | chr1_2:18464048-18464067 | Msa0060690:CDS | 40.0% | |
| TGTTGGGTCTGTTAAACACT+GGG | + | chr1_2:18464049-18464068 | Msa0060690:CDS | 40.0% | |
| TACAACAATAACCGGAATGG+TGG | + | chr1_2:18464376-18464395 | Msa0060690:intron | 40.0% | |
| ACAACAATAACCGGAATGGT+GGG | + | chr1_2:18464377-18464396 | Msa0060690:intron | 40.0% | |
| !! | TCTTTTAACTCCCACCATTC+CGG | - | chr1_2:18464390-18464409 | None:intergenic | 40.0% |
| CTGTGTCATGTATTATGGGA+CGG | - | chr1_2:18464554-18464573 | None:intergenic | 40.0% | |
| ATAAGTCATCTATTGCGGGA+CGG | + | chr1_2:18464774-18464793 | Msa0060690:intron | 40.0% | |
| TTATCCAAGATGAGCTACTG+CGG | + | chr1_2:18464971-18464990 | Msa0060690:intron | 40.0% | |
| GTGATTGATAAGGAACATGG+TGG | + | chr1_2:18465457-18465476 | Msa0060690:intron | 40.0% | |
| !! | AACATGGTGGGTTTGTGAAA+TGG | + | chr1_2:18465470-18465489 | Msa0060690:CDS | 40.0% |
| CGCTTATAAAACCTTGGATG+CGG | + | chr1_2:18466126-18466145 | Msa0060690:intron | 40.0% | |
| TTATAAAACCTTGGATGCGG+TGG | + | chr1_2:18466129-18466148 | Msa0060690:intron | 40.0% | |
| TACTCCCCAAAAAGTCTCAT+AGG | - | chr1_2:18466268-18466287 | None:intergenic | 40.0% | |
| !! | TATGAGACTTTTTGGGGAGT+AGG | + | chr1_2:18466267-18466286 | Msa0060690:intron | 40.0% |
| ATAGTTGCAATGCATTGCCA+CGG | + | chr1_2:18466516-18466535 | Msa0060690:intron | 40.0% | |
| CAAGTATAGGAAAAGAACCG+TGG | - | chr1_2:18466536-18466555 | None:intergenic | 40.0% | |
| !!! | TGGGACCCATTTTAGAGTTT+TGG | + | chr1_2:18466626-18466645 | Msa0060690:intron | 40.0% |
| !!! | GACCCATTTTAGAGTTTTGG+AGG | + | chr1_2:18466629-18466648 | Msa0060690:intron | 40.0% |
| ATGTAGTTGAGGTAGTTGAG+TGG | + | chr1_2:18466673-18466692 | Msa0060690:intron | 40.0% | |
| CAAATGCTTCCCAAAACCTT+AGG | - | chr1_2:18466766-18466785 | None:intergenic | 40.0% | |
| !!! | AGGATGGTTTTGGATTTGCT+AGG | - | chr1_2:18466947-18466966 | None:intergenic | 40.0% |
| CACTAGGATCAACGTAATGT+TGG | - | chr1_2:18467248-18467267 | None:intergenic | 40.0% | |
| CAACATTACGTTGATCCTAG+TGG | + | chr1_2:18467246-18467265 | Msa0060690:intron | 40.0% | |
| GATCCTAGTGGAATTAGACT+CGG | + | chr1_2:18467258-18467277 | Msa0060690:intron | 40.0% | |
| TATCCGAGTCTAATTCCACT+AGG | - | chr1_2:18467264-18467283 | None:intergenic | 40.0% | |
| AGGAAAGAAACTAAACCTGG+AGG | - | chr1_2:18467483-18467502 | None:intergenic | 40.0% | |
| TCAGACTTTATGGCCAAGTT+GGG | + | chr1_2:18467583-18467602 | Msa0060690:intron | 40.0% | |
| TATATCAGGAATGATGCCGT+AGG | + | chr1_2:18467664-18467683 | Msa0060690:intron | 40.0% | |
| TATGTGAGTAACCAGCTTGT+TGG | + | chr1_2:18468173-18468192 | Msa0060690:intron | 40.0% | |
| !! | AGTTTTGTGCTGTAGCAAAC+CGG | + | chr1_2:18468320-18468339 | Msa0060690:intron | 40.0% |
| CAAGATGTCTCACTCTTTCT+GGG | - | chr1_2:18468435-18468454 | None:intergenic | 40.0% | |
| ACAAGATGTCTCACTCTTTC+TGG | - | chr1_2:18468436-18468455 | None:intergenic | 40.0% | |
| !! | TATAATGGTAATGGGGAAGG+AGG | + | chr1_2:18468596-18468615 | Msa0060690:intron | 40.0% |
| !! | ATAATGGTAATGGGGAAGGA+GGG | + | chr1_2:18468597-18468616 | Msa0060690:intron | 40.0% |
| GTGGTTGAAGGTGATTTATG+CGG | + | chr1_2:18468705-18468724 | Msa0060690:intron | 40.0% | |
| TGGTTGAAGGTGATTTATGC+GGG | + | chr1_2:18468706-18468725 | Msa0060690:intron | 40.0% | |
| AGTTGTAGAATTGCGGTTGA+AGG | + | chr1_2:18468744-18468763 | Msa0060690:intron | 40.0% | |
| CTCTTCACCGGCAATAATAA+CGG | + | chr1_2:18468800-18468819 | Msa0060690:intron | 40.0% | |
| ! | TTTTGATGTCTCGTCTTGTG+CGG | + | chr1_2:18469672-18469691 | Msa0060690:intron | 40.0% |
| GATTTGGACAATGTCTATCG+TGG | - | chr1_2:18470041-18470060 | None:intergenic | 40.0% | |
| !! | AGAAGAGACATGGCTTTAAG+TGG | + | chr1_2:18470388-18470407 | Msa0060690:intron | 40.0% |
| !! | GAAGAGACATGGCTTTAAGT+GGG | + | chr1_2:18470389-18470408 | Msa0060690:intron | 40.0% |
| GAAGGTGACTGGGAAAATAT+TGG | + | chr1_2:18470529-18470548 | Msa0060690:CDS | 40.0% | |
| !! | AAGCACTGGGAATTTACAGT+AGG | + | chr1_2:18470559-18470578 | Msa0060690:CDS | 40.0% |
| !! | ACAAAAGAGTGTTGGAAGGA+GGG | - | chr1_2:18470690-18470709 | None:intergenic | 40.0% |
| !! | AACAAAAGAGTGTTGGAAGG+AGG | - | chr1_2:18470691-18470710 | None:intergenic | 40.0% |
| TACTTGTGAAACCCTACAGA+AGG | + | chr1_2:18470996-18471015 | Msa0060690:intron | 40.0% | |
| !! | ATGGTGGTGGGATTGTTAAA+TGG | + | chr1_2:18471156-18471175 | Msa0060690:CDS | 40.0% |
| !! | TGGTGGTGGGATTGTTAAAT+GGG | + | chr1_2:18471157-18471176 | Msa0060690:CDS | 40.0% |
| CGAATATGAGAAGCTAAAGG+AGG | + | chr1_2:18471184-18471203 | Msa0060690:CDS | 40.0% | |
| CATGAAGGTAGAGTGCATGA+AGG | + | chr1_2:18464014-18464033 | Msa0060690:CDS | 45.0% | |
| GTAGAGTGCATGAAGGTGAT+TGG | + | chr1_2:18464021-18464040 | Msa0060690:CDS | 45.0% | |
| TGGGAGTTAAAAGATTGGGC+CGG | + | chr1_2:18464396-18464415 | Msa0060690:intron | 45.0% | |
| ATTGGGCCGGTGGATATATA+GGG | + | chr1_2:18464409-18464428 | Msa0060690:intron | 45.0% | |
| CCTTCACCCTATATATCCAC+CGG | - | chr1_2:18464418-18464437 | None:intergenic | 45.0% | |
| GTCATGTATTATGGGACGGA+GGG | - | chr1_2:18464550-18464569 | None:intergenic | 45.0% | |
| TGTCATGTATTATGGGACGG+AGG | - | chr1_2:18464551-18464570 | None:intergenic | 45.0% | |
| AGTGTCTTTGATGGGGAAGT+GGG | + | chr1_2:18465398-18465417 | Msa0060690:CDS | 45.0% | |
| GTGATGTCCAAAATCGCTTG+TGG | - | chr1_2:18466315-18466334 | None:intergenic | 45.0% | |
| ACATCGTCTGTCAAAATGGG+TGG | + | chr1_2:18466419-18466438 | Msa0060690:intron | 45.0% | |
| GTGGCAATGCATTGCAACTA+TGG | - | chr1_2:18466517-18466536 | None:intergenic | 45.0% | |
| !!! | AGAGTTTTGGAGGAGTGGTA+TGG | + | chr1_2:18466639-18466658 | Msa0060690:intron | 45.0% |
| !! | CTTCACTTGGTGTGCTAGTT+CGG | + | chr1_2:18466976-18466995 | Msa0060690:intron | 45.0% |
| !! | TTCACTTGGTGTGCTAGTTC+GGG | + | chr1_2:18466977-18466996 | Msa0060690:intron | 45.0% |
| ATGTCTCTGTTCAAACACCG+TGG | + | chr1_2:18467293-18467312 | Msa0060690:intron | 45.0% | |
| TCACCTTACGACATTGTCTC+CGG | + | chr1_2:18467545-18467564 | Msa0060690:intron | 45.0% | |
| TGGCCATAAAGTCTGAGCAT+TGG | - | chr1_2:18467579-18467598 | None:intergenic | 45.0% | |
| CTCAGACTTTATGGCCAAGT+TGG | + | chr1_2:18467582-18467601 | Msa0060690:intron | 45.0% | |
| TAAGCAAGGAGATCATTGGG+AGG | - | chr1_2:18467646-18467665 | None:intergenic | 45.0% | |
| CCTAGGATAAAGGGTTCCTA+CGG | - | chr1_2:18467683-18467702 | None:intergenic | 45.0% | |
| CGTAGGAACCCTTTATCCTA+GGG | + | chr1_2:18467681-18467700 | Msa0060690:intron | 45.0% | |
| AACCCTTTATCCTAGGGCTT+AGG | + | chr1_2:18467687-18467706 | Msa0060690:intron | 45.0% | |
| AGCCTAAGCCCTAGGATAAA+GGG | - | chr1_2:18467692-18467711 | None:intergenic | 45.0% | |
| AGAAACTCTTTGCAACCTCG+AGG | - | chr1_2:18467949-18467968 | None:intergenic | 45.0% | |
| AATAGATTGGAGGCCTCCTA+TGG | + | chr1_2:18468541-18468560 | Msa0060690:intron | 45.0% | |
| AACTTAACCCATCCCTCCAT+AGG | - | chr1_2:18468560-18468579 | None:intergenic | 45.0% | |
| ! | GTGAGTGATGGTGAATGGTT+AGG | + | chr1_2:18468627-18468646 | Msa0060690:intron | 45.0% |
| ! | AGTGATGGTGAATGGTTAGG+TGG | + | chr1_2:18468630-18468649 | Msa0060690:intron | 45.0% |
| TGAAGGTGATTTATGCGGGA+AGG | + | chr1_2:18468710-18468729 | Msa0060690:intron | 45.0% | |
| GTGATTTATGCGGGAAGGTT+GGG | + | chr1_2:18468715-18468734 | Msa0060690:intron | 45.0% | |
| GCGGTTGAAGGTGATTTATG+CGG | + | chr1_2:18468756-18468775 | Msa0060690:intron | 45.0% | |
| CGGTTGAAGGTGATTTATGC+GGG | + | chr1_2:18468757-18468776 | Msa0060690:intron | 45.0% | |
| GTGATTTATGCGGGACTTCT+TGG | + | chr1_2:18468766-18468785 | Msa0060690:intron | 45.0% | |
| ATTTATGCGGGACTTCTTGG+TGG | + | chr1_2:18468769-18468788 | Msa0060690:intron | 45.0% | |
| GTGGTTGCTAATCTCTTCAC+CGG | + | chr1_2:18468788-18468807 | Msa0060690:intron | 45.0% | |
| AGGGCTTCCGTTATTATTGC+CGG | - | chr1_2:18468810-18468829 | None:intergenic | 45.0% | |
| !! | AAGAAAAGTGGTGACGGCTA+GGG | - | chr1_2:18469503-18469522 | None:intergenic | 45.0% |
| ! | ATCTGGAACTTGCTTGTGGA+TGG | + | chr1_2:18470238-18470257 | Msa0060690:intron | 45.0% |
| !! | CATGGCTTTAAGTGGGAAAG+TGG | + | chr1_2:18470396-18470415 | Msa0060690:intron | 45.0% |
| GAAGTAGAGATTCAAGCACC+TGG | + | chr1_2:18470424-18470443 | Msa0060690:CDS | 45.0% | |
| ! | ATCACCACAGAAGTACATGG+AGG | + | chr1_2:18470496-18470515 | Msa0060690:CDS | 45.0% |
| TCTACCTCCATGTACTTCTG+TGG | - | chr1_2:18470503-18470522 | None:intergenic | 45.0% | |
| TAGAGTGCATGAAGGTGACT+GGG | + | chr1_2:18470519-18470538 | Msa0060690:CDS | 45.0% | |
| GCAAGGTCCAAGTATGAATC+AGG | - | chr1_2:18471227-18471246 | None:intergenic | 45.0% | |
| ! | ATACTTGGACCTTGCTGTGA+AGG | + | chr1_2:18471232-18471251 | Msa0060690:CDS | 45.0% |
| ! | CTTTTGTGACCTTCACAGCA+AGG | - | chr1_2:18471244-18471263 | None:intergenic | 45.0% |
| !!! | GATTTATATATTTTTTTTTT+TGG | + | chr1_2:18465028-18465047 | Msa0060690:intron | 5.0% |
| !! | TATAAAATTTAATCTATTAT+TGG | - | chr1_2:18470165-18470184 | None:intergenic | 5.0% |
| GAGTTAAAAGATTGGGCCGG+TGG | + | chr1_2:18464399-18464418 | Msa0060690:intron | 50.0% | |
| GATTGGGCCGGTGGATATAT+AGG | + | chr1_2:18464408-18464427 | Msa0060690:intron | 50.0% | |
| CCGGTGGATATATAGGGTGA+AGG | + | chr1_2:18464415-18464434 | Msa0060690:intron | 50.0% | |
| TCTTCCGCAGTAGCTCATCT+TGG | - | chr1_2:18464978-18464997 | None:intergenic | 50.0% | |
| TACGTGCGAATCCATGCAGA+AGG | + | chr1_2:18465310-18465329 | Msa0060690:intron | 50.0% | |
| CAGTGTCTTTGATGGGGAAG+TGG | + | chr1_2:18465397-18465416 | Msa0060690:CDS | 50.0% | |
| TGTAAATGCCACCGCATCCA+AGG | - | chr1_2:18466140-18466159 | None:intergenic | 50.0% | |
| CACCTTACGACATTGTCTCC+GGG | + | chr1_2:18467546-18467565 | Msa0060690:intron | 50.0% | |
| TTCCCGGAGACAATGTCGTA+AGG | - | chr1_2:18467551-18467570 | None:intergenic | 50.0% | |
| TTACGACATTGTCTCCGGGA+AGG | + | chr1_2:18467550-18467569 | Msa0060690:intron | 50.0% | |
| !! | CTGAGCATTGGTTTCCTTCC+CGG | - | chr1_2:18467567-18467586 | None:intergenic | 50.0% |
| ATTAGACGACGCTCCCAACT+TGG | - | chr1_2:18467599-18467618 | None:intergenic | 50.0% | |
| CCGTAGGAACCCTTTATCCT+AGG | + | chr1_2:18467680-18467699 | Msa0060690:intron | 50.0% | |
| GAGCCTAAGCCCTAGGATAA+AGG | - | chr1_2:18467693-18467712 | None:intergenic | 50.0% | |
| TTATCCTAGGGCTTAGGCTC+CGG | + | chr1_2:18467693-18467712 | Msa0060690:intron | 50.0% | |
| AGGGAGAGAGAGAAAGAAGC+CGG | - | chr1_2:18467715-18467734 | None:intergenic | 50.0% | |
| GTGTTCTCTTCTCTCGTTGC+CGG | + | chr1_2:18467908-18467927 | Msa0060690:intron | 50.0% | |
| TGTTCTCTTCTCTCGTTGCC+GGG | + | chr1_2:18467909-18467928 | Msa0060690:intron | 50.0% | |
| CTTTGCAACCTCGAGGAACT+CGG | - | chr1_2:18467942-18467961 | None:intergenic | 50.0% | |
| CTCTCAACCACGTGACTTCT+CGG | + | chr1_2:18467967-18467986 | Msa0060690:intron | 50.0% | |
| TCTCAACCACGTGACTTCTC+GGG | + | chr1_2:18467968-18467987 | Msa0060690:intron | 50.0% | |
| ! | TCTCGGGAGACAGGCTTTTT+AGG | + | chr1_2:18467984-18468003 | Msa0060690:intron | 50.0% |
| TTAACCCATCCCTCCATAGG+AGG | - | chr1_2:18468557-18468576 | None:intergenic | 50.0% | |
| ! | TGGTGGTGAGTGATGGTGAA+TGG | + | chr1_2:18468622-18468641 | Msa0060690:intron | 50.0% |
| GGTGATTTATGCGGGAAGGT+TGG | + | chr1_2:18468714-18468733 | Msa0060690:intron | 50.0% | |
| !! | GAAGAAAAGTGGTGACGGCT+AGG | - | chr1_2:18469504-18469523 | None:intergenic | 50.0% |
| ! | CTCGATCTGGAACTTGCTTG+TGG | + | chr1_2:18470234-18470253 | Msa0060690:intron | 50.0% |
| !! | GGCTTTAAGTGGGAAAGTGG+AGG | + | chr1_2:18463899-18463918 | Msa0060690:CDS | 50.0% |
| CATGGAGGTAGAGTGCATGA+AGG | + | chr1_2:18470511-18470530 | Msa0060690:CDS | 50.0% | |
| GTAGAGTGCATGAAGGTGAC+TGG | + | chr1_2:18470518-18470537 | Msa0060690:CDS | 50.0% | |
| AGTCATCTATTGCGGGACGG+AGG | + | chr1_2:18464777-18464796 | Msa0060690:intron | 55.0% | |
| GTCATCTATTGCGGGACGGA+GGG | + | chr1_2:18464778-18464797 | Msa0060690:intron | 55.0% | |
| GACTTTCACGGGTCACTCTC+AGG | - | chr1_2:18467440-18467459 | None:intergenic | 55.0% | |
| AGATTGGAGGCCTCCTATGG+AGG | + | chr1_2:18468544-18468563 | Msa0060690:intron | 55.0% | |
| GATTGGAGGCCTCCTATGGA+GGG | + | chr1_2:18468545-18468564 | Msa0060690:intron | 55.0% | |
| !! | TATGGTAGAGCTTTGGGGCG+TGG | + | chr1_2:18468686-18468705 | Msa0060690:intron | 55.0% |
| ! | GAGGAACTCGGTTCGAGACC+CGG | - | chr1_2:18467930-18467949 | None:intergenic | 60.0% |
| GTCTCGAACCGAGTTCCTCG+AGG | + | chr1_2:18467931-18467950 | Msa0060690:intron | 60.0% | |
| CTGTCTCCCGAGAAGTCACG+TGG | - | chr1_2:18467977-18467996 | None:intergenic | 60.0% | |
| CACGTGACTTCTCGGGAGAC+AGG | + | chr1_2:18467975-18467994 | Msa0060690:intron | 60.0% | |
| GAGGCCTCCTATGGAGGGAT+GGG | + | chr1_2:18468550-18468569 | Msa0060690:intron | 60.0% | |
| !! | GGTAATGGGGAAGGAGGGTG+TGG | + | chr1_2:18468602-18468621 | Msa0060690:intron | 60.0% |
| ! | AATGGGGAAGGAGGGTGTGG+TGG | + | chr1_2:18468605-18468624 | Msa0060690:intron | 60.0% |
| ! | GAGGGTGTGGTGGTGAGTGA+TGG | + | chr1_2:18468615-18468634 | Msa0060690:intron | 60.0% |
| !! | GAGCTTTGGGGCGTGGTTGA+AGG | + | chr1_2:18468693-18468712 | Msa0060690:intron | 60.0% |
| GAAGCCGGAGCCTAAGCCCT+AGG | - | chr1_2:18467700-18467719 | None:intergenic | 65.0% | |
| GGAGGCCTCCTATGGAGGGA+TGG | + | chr1_2:18468549-18468568 | Msa0060690:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 18463897 | 18471292 | 18463897 | ID=Msa0060690;Name=Msa0060690 |
| chr1_2 | mRNA | 18463897 | 18471292 | 18463897 | ID=Msa0060690-mRNA-1;Parent=Msa0060690;Name=Msa0060690-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|0.5|0.4|5|0|281 |
| chr1_2 | exon | 18463897 | 18464091 | 18463897 | ID=Msa0060690-mRNA-1:exon:7176;Parent=Msa0060690-mRNA-1 |
| chr1_2 | exon | 18465329 | 18465442 | 18465329 | ID=Msa0060690-mRNA-1:exon:7177;Parent=Msa0060690-mRNA-1 |
| chr1_2 | exon | 18465469 | 18465567 | 18465469 | ID=Msa0060690-mRNA-1:exon:7178;Parent=Msa0060690-mRNA-1 |
| chr1_2 | exon | 18470421 | 18470580 | 18470421 | ID=Msa0060690-mRNA-1:exon:7179;Parent=Msa0060690-mRNA-1 |
| chr1_2 | exon | 18471015 | 18471292 | 18471015 | ID=Msa0060690-mRNA-1:exon:7180;Parent=Msa0060690-mRNA-1 |
| chr1_2 | CDS | 18463897 | 18464091 | 18463897 | ID=Msa0060690-mRNA-1:cds;Parent=Msa0060690-mRNA-1 |
| chr1_2 | CDS | 18465329 | 18465442 | 18465329 | ID=Msa0060690-mRNA-1:cds;Parent=Msa0060690-mRNA-1 |
| chr1_2 | CDS | 18465469 | 18465567 | 18465469 | ID=Msa0060690-mRNA-1:cds;Parent=Msa0060690-mRNA-1 |
| chr1_2 | CDS | 18470421 | 18470580 | 18470421 | ID=Msa0060690-mRNA-1:cds;Parent=Msa0060690-mRNA-1 |
| chr1_2 | CDS | 18471015 | 18471292 | 18471015 | ID=Msa0060690-mRNA-1:cds;Parent=Msa0060690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
