Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226260 | XP_013465569.1 | 95.636 | 275 | 12 | 0 | 1 | 275 | 1 | 275 | 9.52e-168 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226260 | A0A072VN82 | 95.636 | 275 | 12 | 0 | 1 | 275 | 1 | 275 | 4.55e-168 | 475 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026780 | Msa0226260 | 0.826966 | 2.028971e-54 | -8.615850e-47 |
| Msa0029520 | Msa0226260 | -0.805708 | 1.171408e-49 | -8.615850e-47 |
| Msa0042950 | Msa0226260 | -0.802399 | 5.713808e-49 | -8.615850e-47 |
| Msa0090870 | Msa0226260 | 0.818394 | 2.005493e-52 | -8.615850e-47 |
| Msa0092480 | Msa0226260 | -0.813113 | 3.016596e-51 | -8.615850e-47 |
| Msa0113370 | Msa0226260 | -0.802727 | 4.889967e-49 | -8.615850e-47 |
| Msa0122530 | Msa0226260 | 0.811288 | 7.544936e-51 | -8.615850e-47 |
| Msa0136870 | Msa0226260 | -0.829571 | 4.778463e-55 | -8.615850e-47 |
| Msa0152850 | Msa0226260 | 0.801849 | 7.416506e-49 | -8.615850e-47 |
| Msa0173950 | Msa0226260 | -0.801591 | 8.375735e-49 | -8.615850e-47 |
| Msa0178840 | Msa0226260 | -0.828216 | 1.016826e-54 | -8.615850e-47 |
| Msa0183390 | Msa0226260 | 0.824049 | 9.964321e-54 | -8.615850e-47 |
| Msa0220400 | Msa0226260 | -0.803996 | 2.669826e-49 | -8.615850e-47 |
| Msa0224870 | Msa0226260 | 0.807420 | 5.099188e-50 | -8.615850e-47 |
| Msa0226260 | Msa0236920 | 0.803845 | 2.869895e-49 | -8.615850e-47 |
| Msa0226260 | Msa0256140 | 0.800595 | 1.338561e-48 | -8.615850e-47 |
| Msa0226260 | Msa0281050 | 0.821743 | 3.432941e-53 | -8.615850e-47 |
| Msa0226260 | Msa0304730 | 0.919994 | 2.240000e-87 | -8.615850e-47 |
| Msa0226260 | Msa0331580 | 0.915250 | 7.359259e-85 | -8.615850e-47 |
| Msa0226260 | Msa0383870 | -0.818829 | 1.597621e-52 | -8.615850e-47 |
| Msa0226260 | Msa0436270 | -0.819328 | 1.230715e-52 | -8.615850e-47 |
| Msa0226260 | Msa0500610 | -0.844653 | 6.618416e-59 | -8.615850e-47 |
| Msa0226260 | Msa0500700 | -0.825192 | 5.359063e-54 | -8.615850e-47 |
| Msa0226260 | Msa0535400 | 0.800010 | 1.761434e-48 | -8.615850e-47 |
| Msa0226260 | Msa0548420 | 0.808735 | 2.676611e-50 | -8.615850e-47 |
| Msa0226260 | Msa0603310 | 0.802820 | 4.678195e-49 | -8.615850e-47 |
| Msa0226260 | Msa0626920 | 0.827255 | 1.730852e-54 | -8.615850e-47 |
| Msa0226260 | Msa0637930 | -0.801146 | 1.033049e-48 | -8.615850e-47 |
| Msa0226260 | Msa0694140 | 0.801057 | 1.077305e-48 | -8.615850e-47 |
| Msa0226260 | Msa0744640 | 0.845980 | 2.893840e-59 | -8.615850e-47 |
| Msa0226260 | Msa0747230 | 0.803446 | 3.473073e-49 | -8.615850e-47 |
| Msa0226260 | Msa0776560 | 0.800005 | 1.765605e-48 | -8.615850e-47 |
| Msa0226260 | Msa0778570 | 0.801512 | 8.696276e-49 | -8.615850e-47 |
| Msa0226260 | Msa0795860 | 0.810080 | 1.376870e-50 | -8.615850e-47 |
| Msa0226260 | Msa0841730 | 0.847057 | 1.471079e-59 | -8.615850e-47 |
| Msa0226260 | Msa0870510 | 0.807751 | 4.337333e-50 | -8.615850e-47 |
| Msa0226260 | Msa0873910 | 0.807515 | 4.867743e-50 | -8.615850e-47 |
| Msa0226260 | Msa0928180 | 0.800803 | 1.214290e-48 | -8.615850e-47 |
| Msa0226260 | Msa0946110 | 0.922789 | 6.225026e-89 | -8.615850e-47 |
| Msa0226260 | Msa0964020 | 0.819278 | 1.263072e-52 | -8.615850e-47 |
| Msa0226260 | Msa0969380 | 0.811915 | 5.513618e-51 | -8.615850e-47 |
| Msa0226260 | Msa0969720 | 0.819986 | 8.704728e-53 | -8.615850e-47 |
| Msa0226260 | Msa0974710 | 0.820752 | 5.810450e-53 | -8.615850e-47 |
| Msa0226260 | Msa0992510 | 0.827280 | 1.707135e-54 | -8.615850e-47 |
| Msa0226260 | Msa0993190 | 0.803829 | 2.892156e-49 | -8.615850e-47 |
| Msa0226260 | Msa1074210 | 0.810155 | 1.326371e-50 | -8.615850e-47 |
| Msa0226260 | Msa1080130 | 0.850066 | 2.159187e-60 | -8.615850e-47 |
| Msa0226260 | Msa1080610 | -0.813233 | 2.839942e-51 | -8.615850e-47 |
| Msa0226260 | Msa1080680 | -0.812463 | 4.186719e-51 | -8.615850e-47 |
| Msa0226260 | Msa1129300 | -0.800288 | 1.546409e-48 | -8.615850e-47 |
| Msa0226260 | Msa1154320 | 0.807346 | 5.286423e-50 | -8.615850e-47 |
| Msa0226260 | Msa1159160 | 0.803087 | 4.119977e-49 | -8.615850e-47 |
| Msa0226260 | Msa1167150 | -0.817346 | 3.458922e-52 | -8.615850e-47 |
| Msa0226260 | Msa1167310 | 0.850563 | 1.566010e-60 | -8.615850e-47 |
| Msa0226260 | Msa1184230 | 0.868837 | 4.852468e-66 | -8.615850e-47 |
| Msa0226260 | Msa1190100 | -0.817870 | 2.634543e-52 | -8.615850e-47 |
| Msa0226260 | Msa1202800 | 0.821999 | 2.994183e-53 | -8.615850e-47 |
| Msa0226260 | Msa1207920 | -0.819412 | 1.177343e-52 | -8.615850e-47 |
| Msa0226260 | Msa1213890 | 0.801110 | 1.050907e-48 | -8.615850e-47 |
| Msa0226260 | Msa1238600 | 0.813785 | 2.147193e-51 | -8.615850e-47 |
| Msa0226260 | Msa1255210 | 0.835469 | 1.648270e-56 | -8.615850e-47 |
| Msa0226260 | Msa1258030 | -0.831426 | 1.680577e-55 | -8.615850e-47 |
| Msa0226260 | Msa1268390 | 0.810975 | 8.823175e-51 | -8.615850e-47 |
| Msa0226260 | Msa1268420 | 0.805615 | 1.225605e-49 | -8.615850e-47 |
| Msa0226260 | Msa1289050 | 0.817638 | 2.972848e-52 | -8.615850e-47 |
| Msa0226260 | Msa1289090 | 0.817515 | 3.167961e-52 | -8.615850e-47 |
| Msa0226260 | Msa1295650 | 0.830485 | 2.860355e-55 | -8.615850e-47 |
| Msa0226260 | Msa1331570 | -0.800006 | 1.764561e-48 | -8.615850e-47 |
| Msa0226260 | Msa1345540 | -0.809355 | 1.971546e-50 | -8.615850e-47 |
| Msa0226260 | Msa1364350 | -0.846043 | 2.783030e-59 | -8.615850e-47 |
| Msa0226260 | Msa1392980 | 0.809010 | 2.336703e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226260 | MtrunA17_Chr2g0333081 | 95.636 | 275 | 12 | 0 | 1 | 275 | 1 | 275 | 8.75e-172 | 475 |
| Msa0226260 | MtrunA17_Chr4g0063891 | 40.927 | 259 | 128 | 5 | 1 | 235 | 1 | 258 | 1.69e-51 | 170 |
| Msa0226260 | MtrunA17_Chr7g0262061 | 49.180 | 122 | 59 | 1 | 121 | 242 | 211 | 329 | 3.10e-34 | 127 |
| Msa0226260 | MtrunA17_Chr5g0411051 | 52.941 | 102 | 48 | 0 | 136 | 237 | 119 | 220 | 4.46e-33 | 121 |
| Msa0226260 | MtrunA17_Chr7g0262541 | 46.721 | 122 | 59 | 2 | 131 | 246 | 226 | 347 | 1.75e-30 | 117 |
| Msa0226260 | MtrunA17_Chr1g0186111 | 38.255 | 149 | 86 | 2 | 101 | 249 | 96 | 238 | 1.43e-25 | 103 |
| Msa0226260 | MtrunA17_Chr1g0186111 | 45.455 | 110 | 59 | 1 | 133 | 241 | 266 | 375 | 8.03e-22 | 93.6 |
| Msa0226260 | MtrunA17_Chr4g0003301 | 60.000 | 65 | 26 | 0 | 166 | 230 | 6 | 70 | 2.25e-23 | 90.5 |
| Msa0226260 | MtrunA17_Chr3g0104511 | 40.816 | 98 | 58 | 0 | 139 | 236 | 399 | 496 | 3.42e-19 | 87.0 |
| Msa0226260 | MtrunA17_Chr4g0003311 | 43.787 | 169 | 76 | 4 | 1 | 167 | 1 | 152 | 4.87e-19 | 82.4 |
| Msa0226260 | MtrunA17_Chr5g0436741 | 38.318 | 107 | 66 | 0 | 137 | 243 | 296 | 402 | 1.01e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226260 | AT5G20190.1 | 62.626 | 99 | 37 | 0 | 139 | 237 | 156 | 254 | 2.20e-40 | 142 |
| Msa0226260 | AT1G80130.1 | 41.852 | 270 | 113 | 7 | 1 | 235 | 1 | 261 | 1.72e-39 | 140 |
| Msa0226260 | AT4G32340.1 | 59.000 | 100 | 40 | 1 | 139 | 237 | 110 | 209 | 6.34e-35 | 126 |
| Msa0226260 | AT4G17940.1 | 57.292 | 96 | 41 | 0 | 142 | 237 | 153 | 248 | 4.74e-34 | 125 |
| Msa0226260 | AT2G29670.1 | 40.650 | 123 | 71 | 1 | 131 | 253 | 412 | 532 | 4.23e-22 | 95.9 |
| Msa0226260 | AT2G29670.2 | 40.650 | 123 | 71 | 1 | 131 | 253 | 412 | 532 | 4.23e-22 | 95.9 |
| Msa0226260 | AT1G04530.1 | 47.368 | 95 | 49 | 1 | 142 | 236 | 124 | 217 | 4.01e-21 | 91.3 |
| Msa0226260 | AT1G04530.1 | 28.571 | 126 | 68 | 3 | 136 | 239 | 185 | 310 | 4.45e-11 | 62.8 |
| Msa0226260 | AT1G07280.3 | 41.346 | 104 | 61 | 0 | 138 | 241 | 434 | 537 | 1.33e-19 | 88.6 |
| Msa0226260 | AT1G07280.1 | 41.346 | 104 | 61 | 0 | 138 | 241 | 434 | 537 | 1.33e-19 | 88.6 |
| Msa0226260 | AT1G07280.2 | 41.346 | 104 | 61 | 0 | 138 | 241 | 434 | 537 | 1.33e-19 | 88.6 |
| Msa0226260 | AT3G47080.1 | 36.735 | 98 | 62 | 0 | 139 | 236 | 400 | 497 | 6.83e-14 | 71.6 |
Find 55 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGTAAAAGAGAATTATT+TGG | 0.185235 | 2_1:+76783382 | None:intergenic |
| CTTGGACTTGCAAGTGTTCT+AGG | 0.227205 | 2_1:+76783739 | None:intergenic |
| CTCTCTATGCTGATTTAATA+TGG | 0.230159 | 2_1:-76782820 | Msa0226260:CDS |
| TTTAACAGCCCTATCAAAAT+AGG | 0.241375 | 2_1:+76782766 | None:intergenic |
| GTATGTAGAAAGAGCCATTT+TGG | 0.290128 | 2_1:-76782870 | Msa0226260:CDS |
| GGTTTGCTTCAATCATGTTT+TGG | 0.294320 | 2_1:+76783404 | None:intergenic |
| AAGTAGGTTCGTGGAGATTA+TGG | 0.302005 | 2_1:-76782905 | Msa0226260:intron |
| ATCACTAGGGCTAGCCAAAA+TGG | 0.330932 | 2_1:+76782856 | None:intergenic |
| TAGTTTAGATAAGCAAGTTT+TGG | 0.332832 | 2_1:-76783608 | Msa0226260:CDS |
| AGTAATGGGTGGTGGTGGTA+TGG | 0.351405 | 2_1:-76783542 | Msa0226260:CDS |
| AATGGTAGTGGAAGAGATTC+TGG | 0.357707 | 2_1:-76783487 | Msa0226260:CDS |
| GATTTATCTTACCAATCATC+TGG | 0.363027 | 2_1:+76782737 | None:intergenic |
| TTCTTTCCTTCCACACTCAA+TGG | 0.370876 | 2_1:-76783797 | Msa0226260:CDS |
| GTAATGGGTGGTGGTGGTAT+GGG | 0.372856 | 2_1:-76783541 | Msa0226260:CDS |
| CAAGTAAAAGAGAATTATTT+GGG | 0.377661 | 2_1:+76783383 | None:intergenic |
| TGGTGATTGAGTTCTTGTTC+AGG | 0.381932 | 2_1:+76783766 | None:intergenic |
| CTTCATATGCAAAATTCCTA+TGG | 0.391469 | 2_1:-76778345 | Msa0226260:CDS |
| GAAAATAGTTCTCTCGTTGA+AGG | 0.392335 | 2_1:+76783637 | None:intergenic |
| GGTGGTATGGGGTGTGATGG+TGG | 0.402385 | 2_1:-76783529 | Msa0226260:CDS |
| GGTGGTGGTATGGGGTGTGA+TGG | 0.405771 | 2_1:-76783532 | Msa0226260:CDS |
| AAGTTGCAAACTTTAGTAAT+GGG | 0.406381 | 2_1:-76783556 | Msa0226260:CDS |
| AGAGATTCTGGTGGTGGAAA+TGG | 0.409069 | 2_1:-76783475 | Msa0226260:CDS |
| TGTGATGGTGGAAGTATTTG+TGG | 0.443120 | 2_1:-76783517 | Msa0226260:CDS |
| AAAGTTGCAAACTTTAGTAA+TGG | 0.445266 | 2_1:-76783557 | Msa0226260:CDS |
| AGTATTTGTGGTGGTTGTAA+TGG | 0.447043 | 2_1:-76783505 | Msa0226260:CDS |
| TCTGGTGGTGGAAATGGAAA+TGG | 0.452290 | 2_1:-76783469 | Msa0226260:CDS |
| AAAGATCAGGTGAAAGTGTA+TGG | 0.469919 | 2_1:+76778272 | None:intergenic |
| GGTGATTGAGTTCTTGTTCA+GGG | 0.477042 | 2_1:+76783767 | None:intergenic |
| TAATGGGTGGTGGTGGTATG+GGG | 0.499472 | 2_1:-76783540 | Msa0226260:CDS |
| TGTGGTGGTTGTAATGGTAG+TGG | 0.516522 | 2_1:-76783499 | Msa0226260:CDS |
| TTAAAAGTGATCCAGATGAT+TGG | 0.517931 | 2_1:-76782748 | Msa0226260:intron |
| TTATCACATCAGCTATGTCC+TGG | 0.518059 | 2_1:-76778368 | Msa0226260:intron |
| CAATTTGAAAAGTAGGTTCG+TGG | 0.525753 | 2_1:-76782914 | Msa0226260:intron |
| CATCTTCTTCAGCGTCCCAT+AGG | 0.538742 | 2_1:+76778329 | None:intergenic |
| GGAAGGAAAGAACTTGGAAT+TGG | 0.544342 | 2_1:+76783808 | None:intergenic |
| ACTTTAGTAATGGGTGGTGG+TGG | 0.545271 | 2_1:-76783547 | Msa0226260:CDS |
| AGTGGAAGAGATTCTGGTGG+TGG | 0.546901 | 2_1:-76783481 | Msa0226260:CDS |
| GATAAAGCATCAGCATCACT+AGG | 0.552225 | 2_1:+76782842 | None:intergenic |
| AAGATTCCATTGAGTGTGGA+AGG | 0.563863 | 2_1:+76783791 | None:intergenic |
| TTCATATGCAAAATTCCTAT+GGG | 0.567504 | 2_1:-76778344 | Msa0226260:CDS |
| GTGATTGAGTTCTTGTTCAG+GGG | 0.572118 | 2_1:+76783768 | None:intergenic |
| GAGTGTGGAAGGAAAGAACT+TGG | 0.576678 | 2_1:+76783802 | None:intergenic |
| GACTTGCAAGTGTTCTAGGA+AGG | 0.580355 | 2_1:+76783743 | None:intergenic |
| GGGGAAGATTCCATTGAGTG+TGG | 0.597244 | 2_1:+76783787 | None:intergenic |
| CAAACTTTAGTAATGGGTGG+TGG | 0.599262 | 2_1:-76783550 | Msa0226260:CDS |
| AATGGATGGGAAAATAATGA+TGG | 0.600399 | 2_1:-76783451 | Msa0226260:CDS |
| TTGCAAACTTTAGTAATGGG+TGG | 0.605342 | 2_1:-76783553 | Msa0226260:CDS |
| TGGTGGAAATGGAAATGGAT+GGG | 0.611749 | 2_1:-76783464 | Msa0226260:CDS |
| TGGTGATGATTCTTAAGAAG+TGG | 0.624905 | 2_1:+76783700 | None:intergenic |
| ATAAAGCATCAGCATCACTA+GGG | 0.631318 | 2_1:+76782843 | None:intergenic |
| TTGCAAGTGTTCTAGGAAGG+TGG | 0.634929 | 2_1:+76783746 | None:intergenic |
| GTGGTGGAAATGGAAATGGA+TGG | 0.643918 | 2_1:-76783465 | Msa0226260:CDS |
| GATGGTGGAAGTATTTGTGG+TGG | 0.659019 | 2_1:-76783514 | Msa0226260:CDS |
| TGGAGATTATGGTAAAGCAG+AGG | 0.689369 | 2_1:-76782894 | Msa0226260:CDS |
| GGTAGTGGAAGAGATTCTGG+TGG | 0.752433 | 2_1:-76783484 | Msa0226260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCATCATAATATTAAT+TGG | + | chr2_1:76779873-76779892 | None:intergenic | 10.0% |
| !! | AAAATATCAAACTTGAAATT+TGG | - | chr2_1:76778872-76778891 | Msa0226260:intron | 15.0% |
| !! | ACAATATATAAATGAAGATT+AGG | - | chr2_1:76779006-76779025 | Msa0226260:intron | 15.0% |
| !!! | TAGGTAAAATATTTTGTAAT+TGG | - | chr2_1:76779030-76779049 | Msa0226260:intron | 15.0% |
| !! | TGTATTGTGATTAAAATATA+TGG | - | chr2_1:76779093-76779112 | Msa0226260:intron | 15.0% |
| !! | TATGATGAAATTAATTAACA+AGG | - | chr2_1:76779881-76779900 | Msa0226260:intron | 15.0% |
| !! | ATGATGAAATTAATTAACAA+GGG | - | chr2_1:76779882-76779901 | Msa0226260:intron | 15.0% |
| !! | AAAAAAAATCCTACAAAAAA+CGG | - | chr2_1:76779917-76779936 | Msa0226260:intron | 15.0% |
| !!! | ATATAAATTGATTGTTTCTA+AGG | - | chr2_1:76779948-76779967 | Msa0226260:intron | 15.0% |
| !!! | TGTTTTTAAGAGAAAAAAAA+GGG | + | chr2_1:76780136-76780155 | None:intergenic | 15.0% |
| !!! | TTGTTTTTAAGAGAAAAAAA+AGG | + | chr2_1:76780137-76780156 | None:intergenic | 15.0% |
| !!! | ATGTTTTGAATAATTTGTTT+TGG | + | chr2_1:76780479-76780498 | None:intergenic | 15.0% |
| !!! | TAAGCTATTTTTAAAAAAAG+TGG | + | chr2_1:76781431-76781450 | None:intergenic | 15.0% |
| !! | TAATTAGATTATCTATCATT+TGG | - | chr2_1:76783427-76783446 | Msa0226260:CDS | 15.0% |
| !! | AATTAGATTATCTATCATTT+GGG | - | chr2_1:76783428-76783447 | Msa0226260:CDS | 15.0% |
| !! | TATAACATCAAATAAAAATC+AGG | + | chr2_1:76783637-76783656 | None:intergenic | 15.0% |
| !! | CAAGTAAAAGAGAATTATTT+GGG | + | chr2_1:76778674-76778693 | None:intergenic | 20.0% |
| !! | TTAAGTTATGTGTTGAAATA+TGG | + | chr2_1:76778840-76778859 | None:intergenic | 20.0% |
| !! | TAATGTTCAATTTGAAAAGT+AGG | - | chr2_1:76779133-76779152 | Msa0226260:intron | 20.0% |
| !! | AGATAAATCTTAAATCTATG+TGG | - | chr2_1:76779331-76779350 | Msa0226260:intron | 20.0% |
| !! | ATAAAGTTCATAGATGAATT+AGG | + | chr2_1:76779387-76779406 | None:intergenic | 20.0% |
| !! | AGAACAAAATATGTTACAAA+AGG | + | chr2_1:76779600-76779619 | None:intergenic | 20.0% |
| !! | ATAAACATGAGAAATACTTA+GGG | - | chr2_1:76779624-76779643 | Msa0226260:intron | 20.0% |
| !!! | TTTATTTGTGTTTCTAGTTA+AGG | - | chr2_1:76779789-76779808 | Msa0226260:intron | 20.0% |
| !! | AAAAAAATCCTACAAAAAAC+GGG | - | chr2_1:76779918-76779937 | Msa0226260:intron | 20.0% |
| !!! | ATAATTTGTTTTGGAAAAAG+AGG | + | chr2_1:76780470-76780489 | None:intergenic | 20.0% |
| !!! | ATAAGCTTTTTTTTGAAAAG+AGG | + | chr2_1:76780892-76780911 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTTTTGAAAAG+AGG | + | chr2_1:76781192-76781211 | None:intergenic | 20.0% |
| !!! | AAATAGCTGTTTTTGAAAAA+AGG | + | chr2_1:76781252-76781271 | None:intergenic | 20.0% |
| !! | TTGAAAAAGAGATTGTAATA+AGG | + | chr2_1:76782872-76782891 | None:intergenic | 20.0% |
| !!! | ATAAACTGTTTTTGAAAAAG+AGG | - | chr2_1:76781563-76781582 | Msa0226260:intron | 20.0% |
| !!! | ATAAATTGTTTTTGAGAAAG+AGG | - | chr2_1:76782144-76782163 | Msa0226260:intron | 20.0% |
| !!! | ATAAGTTGTTTTTGAAAAAG+AGG | - | chr2_1:76782801-76782820 | Msa0226260:CDS | 20.0% |
| !!! | ATAAGTTGTTTTTTGAAAAG+AGG | - | chr2_1:76783027-76783046 | Msa0226260:intron | 20.0% |
| !! | TGTCAATTTGAATTATTATG+AGG | - | chr2_1:76783135-76783154 | Msa0226260:intron | 20.0% |
| !! | GTCAATTTGAATTATTATGA+GGG | - | chr2_1:76783136-76783155 | Msa0226260:intron | 20.0% |
| !! | TTAGTAATTAGTTGTTAGAT+TGG | + | chr2_1:76783524-76783543 | None:intergenic | 20.0% |
| !! | TTTCTTTCCAAAAAAATACA+AGG | - | chr2_1:76783599-76783618 | Msa0226260:CDS | 20.0% |
| !! | TTCTTTCCAAAAAAATACAA+GGG | - | chr2_1:76783600-76783619 | Msa0226260:CDS | 20.0% |
| !!! | ATTTTTGTTCTGTTTCTTCT+TGG | + | chr2_1:76778377-76778396 | None:intergenic | 25.0% |
| !! | TAGTTTAGATAAGCAAGTTT+TGG | - | chr2_1:76778446-76778465 | Msa0226260:intron | 25.0% |
| ! | AAAGTTGCAAACTTTAGTAA+TGG | - | chr2_1:76778497-76778516 | Msa0226260:intron | 25.0% |
| ! | AAGTTGCAAACTTTAGTAAT+GGG | - | chr2_1:76778498-76778517 | Msa0226260:intron | 25.0% |
| ! | CCAAGTAAAAGAGAATTATT+TGG | + | chr2_1:76778675-76778694 | None:intergenic | 25.0% |
| !! | CCAAATAATTCTCTTTTACT+TGG | - | chr2_1:76778672-76778691 | Msa0226260:intron | 25.0% |
| !!! | TTATGCTAAGTTTTTGAAAG+AGG | - | chr2_1:76778698-76778717 | Msa0226260:intron | 25.0% |
| !! | CGAATTAGACTTAAAACTTT+TGG | + | chr2_1:76778967-76778986 | None:intergenic | 25.0% |
| ! | ATATAAATGAAGATTAGGCT+AGG | - | chr2_1:76779011-76779030 | Msa0226260:intron | 25.0% |
| ! | ATATAAACCAAATGATACAG+TGG | - | chr2_1:76779515-76779534 | Msa0226260:intron | 25.0% |
| ! | CATAAACATGAGAAATACTT+AGG | - | chr2_1:76779623-76779642 | Msa0226260:intron | 25.0% |
| ! | AAACACAAATGTAAAAGGTT+TGG | - | chr2_1:76779649-76779668 | Msa0226260:intron | 25.0% |
| ! | ATGTGCAAATTTGTATATGT+AGG | + | chr2_1:76779839-76779858 | None:intergenic | 25.0% |
| !!! | ATAAGCTGTTTTTTGAAAAG+AGG | + | chr2_1:76781683-76781702 | None:intergenic | 25.0% |
| !!! | ATAAGCTGTTTTTTGAAAAG+AGG | + | chr2_1:76781683-76781702 | None:intergenic | 25.0% |
| !!! | GAGATTGTAATAAGGTATTT+TGG | + | chr2_1:76781292-76781311 | None:intergenic | 25.0% |
| ! | ATTTATTCAAAGCTGCTTAT+TGG | + | chr2_1:76781473-76781492 | None:intergenic | 25.0% |
| !!! | ATAAGCTGTTTTTTGAAAAG+AGG | - | chr2_1:76781683-76781702 | Msa0226260:intron | 25.0% |
| !!! | ATAAGCTGTTTTTTGAAAAG+AGG | - | chr2_1:76781683-76781702 | Msa0226260:intron | 25.0% |
| !!! | ATAAGTTGTTTTTGAGAAAG+AGG | - | chr2_1:76781905-76781924 | Msa0226260:intron | 25.0% |
| !!! | ATAAGCTGTTTTTTGAAAAG+AGG | - | chr2_1:76781683-76781702 | Msa0226260:intron | 25.0% |
| !!! | ATAAGCTGTTTTTCAAAAAG+AGG | - | chr2_1:76782263-76782282 | Msa0226260:intron | 25.0% |
| !!! | TAAGCTGTTTTTGAAAAAAG+TGG | - | chr2_1:76782384-76782403 | Msa0226260:intron | 25.0% |
| !!! | ATAAGCTGTTTTTTGAAAAG+AGG | - | chr2_1:76781683-76781702 | Msa0226260:intron | 25.0% |
| !!! | ATAAGCTGATTTTGAAAAAG+AGG | - | chr2_1:76781845-76781864 | Msa0226260:intron | 25.0% |
| ! | GAAAAGAGATCGTAATAATT+AGG | - | chr2_1:76783099-76783118 | Msa0226260:intron | 25.0% |
| !!! | AGTTTTAAAAAACAAGGGAA+AGG | + | chr2_1:76783257-76783276 | None:intergenic | 25.0% |
| !!! | TTGCGAGTTTTAAAAAACAA+GGG | + | chr2_1:76783262-76783281 | None:intergenic | 25.0% |
| !!! | TTTGCGAGTTTTAAAAAACA+AGG | + | chr2_1:76783263-76783282 | None:intergenic | 25.0% |
| !!! | TTTTTTAAAACTCGCAAACA+AGG | - | chr2_1:76783265-76783284 | Msa0226260:intron | 25.0% |
| !!! | TTTTTAAAACTCGCAAACAA+GGG | - | chr2_1:76783266-76783285 | Msa0226260:intron | 25.0% |
| !!! | AACAAACCCTTGTATTTTTT+TGG | + | chr2_1:76783609-76783628 | None:intergenic | 25.0% |
| ! | TTCATATGCAAAATTCCTAT+GGG | - | chr2_1:76783710-76783729 | Msa0226260:CDS | 25.0% |
| AATGGATGGGAAAATAATGA+TGG | - | chr2_1:76778603-76778622 | Msa0226260:intron | 30.0% | |
| !! | CTCTCTATGCTGATTTAATA+TGG | - | chr2_1:76779234-76779253 | Msa0226260:intron | 30.0% |
| TTTAACAGCCCTATCAAAAT+AGG | + | chr2_1:76779291-76779310 | None:intergenic | 30.0% | |
| TTAAAAGTGATCCAGATGAT+TGG | - | chr2_1:76779306-76779325 | Msa0226260:intron | 30.0% | |
| GATTTATCTTACCAATCATC+TGG | + | chr2_1:76779320-76779339 | None:intergenic | 30.0% | |
| TTAGGAGAATGTATACATAG+AGG | + | chr2_1:76779369-76779388 | None:intergenic | 30.0% | |
| GGGATAAACACAAATGTAAA+AGG | - | chr2_1:76779644-76779663 | Msa0226260:intron | 30.0% | |
| TAATTAACAAGGGAACAACA+AGG | - | chr2_1:76779892-76779911 | Msa0226260:intron | 30.0% | |
| AATTAACAAGGGAACAACAA+GGG | - | chr2_1:76779893-76779912 | Msa0226260:intron | 30.0% | |
| !!! | TATATAGACCCGTTTTTTGT+AGG | + | chr2_1:76779929-76779948 | None:intergenic | 30.0% |
| !!! | TTTTTTAACTCCCAAACAAG+GGG | + | chr2_1:76780064-76780083 | None:intergenic | 30.0% |
| !!! | GTTTTTTAACTCCCAAACAA+GGG | + | chr2_1:76780065-76780084 | None:intergenic | 30.0% |
| GTTAAAAAACCAACAAGGAA+AGG | - | chr2_1:76780075-76780094 | Msa0226260:intron | 30.0% | |
| CAATACACTGTGTTATACTT+TGG | - | chr2_1:76780154-76780173 | Msa0226260:intron | 30.0% | |
| ! | GAGATCGTAATAAGTTGTTT+TGG | + | chr2_1:76782820-76782839 | None:intergenic | 30.0% |
| ! | GAGATCGTAATAAACTGTTT+TGG | + | chr2_1:76780511-76780530 | None:intergenic | 30.0% |
| !!! | AGTTGTTTTTGATAAAGACG+TGG | + | chr2_1:76780709-76780728 | None:intergenic | 30.0% |
| ! | GAGATTGTAATAAGCTGTTT+TGG | + | chr2_1:76782880-76782899 | None:intergenic | 30.0% |
| ! | GAGTTTGTAATAAGCTGTTT+TGG | - | chr2_1:76781522-76781541 | Msa0226260:intron | 30.0% |
| !! | ACAAGCTGATTTTGAAAAAG+AGG | - | chr2_1:76781623-76781642 | Msa0226260:intron | 30.0% |
| !!! | AAGCTGTTTTTGAAAAAACG+TGG | - | chr2_1:76781967-76781986 | Msa0226260:intron | 30.0% |
| !! | AGCTGATTTTGAAAAAGACA+TGG | - | chr2_1:76782087-76782106 | Msa0226260:intron | 30.0% |
| !!! | AGCTGTTTTTGAAAAAAACG+TGG | - | chr2_1:76782206-76782225 | Msa0226260:intron | 30.0% |
| !!! | ATAAGCTGTTTTTCGAAAAG+AGG | - | chr2_1:76782441-76782460 | Msa0226260:intron | 30.0% |
| ! | GAGGTTGTAATAAGCTATTT+TGG | - | chr2_1:76782460-76782479 | Msa0226260:intron | 30.0% |
| !!! | ATAAGCTGTTTTTCGAAAAG+AGG | - | chr2_1:76782441-76782460 | Msa0226260:intron | 30.0% |
| ! | GAGATTGTAATAAGCTGTTT+TGG | - | chr2_1:76782880-76782899 | Msa0226260:CDS | 30.0% |
| !!! | TTTTAAAGTTCCCCCAAATT+GGG | + | chr2_1:76783200-76783219 | None:intergenic | 30.0% |
| !!! | ATTTTAAAGTTCCCCCAAAT+TGG | + | chr2_1:76783201-76783220 | None:intergenic | 30.0% |
| ! | AAAAACAAGGGAAAGGTTTT+GGG | + | chr2_1:76783250-76783269 | None:intergenic | 30.0% |
| ! | AAAAAACAAGGGAAAGGTTT+TGG | + | chr2_1:76783251-76783270 | None:intergenic | 30.0% |
| ! | GATTATCTATCATTTGGGAT+TGG | - | chr2_1:76783433-76783452 | Msa0226260:CDS | 30.0% |
| TGGATAGCTCAACTAATTTA+CGG | - | chr2_1:76783453-76783472 | Msa0226260:CDS | 30.0% | |
| !!! | AGACGTTTTGCTTTATTTTC+TGG | - | chr2_1:76783568-76783587 | Msa0226260:CDS | 30.0% |
| CTTCATATGCAAAATTCCTA+TGG | - | chr2_1:76783709-76783728 | Msa0226260:CDS | 30.0% | |
| !!! | GGTGCAGATTTTTTATGTCT+TGG | + | chr2_1:76778336-76778355 | None:intergenic | 35.0% |
| ! | TGGTGATGATTCTTAAGAAG+TGG | + | chr2_1:76778357-76778376 | None:intergenic | 35.0% |
| GAAAATAGTTCTCTCGTTGA+AGG | + | chr2_1:76778420-76778439 | None:intergenic | 35.0% | |
| !!! | CAAGTTTTGGATCATGAAGA+AGG | - | chr2_1:76778459-76778478 | Msa0226260:intron | 35.0% |
| GAAGAAGGTGGTAAAAAAGT+AGG | - | chr2_1:76778474-76778493 | Msa0226260:intron | 35.0% | |
| ! | TTGCAAACTTTAGTAATGGG+TGG | - | chr2_1:76778501-76778520 | Msa0226260:intron | 35.0% |
| AGTATTTGTGGTGGTTGTAA+TGG | - | chr2_1:76778549-76778568 | Msa0226260:intron | 35.0% | |
| !! | GGTTTGCTTCAATCATGTTT+TGG | + | chr2_1:76778653-76778672 | None:intergenic | 35.0% |
| GAATTCAGATTGCATGATGT+CGG | + | chr2_1:76778932-76778951 | None:intergenic | 35.0% | |
| CAATTTGAAAAGTAGGTTCG+TGG | - | chr2_1:76779140-76779159 | Msa0226260:intron | 35.0% | |
| ! | GTATGTAGAAAGAGCCATTT+TGG | - | chr2_1:76779184-76779203 | Msa0226260:intron | 35.0% |
| ! | ATAAAGCATCAGCATCACTA+GGG | + | chr2_1:76779214-76779233 | None:intergenic | 35.0% |
| !!! | AGCTGAAGCCTATTTTGATA+GGG | - | chr2_1:76779280-76779299 | Msa0226260:intron | 35.0% |
| AACATCTACCATGTCACATA+TGG | + | chr2_1:76779434-76779453 | None:intergenic | 35.0% | |
| TCTTGATCCACTGTATCATT+TGG | + | chr2_1:76779525-76779544 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTAACTCCCAAACA+AGG | + | chr2_1:76780066-76780085 | None:intergenic | 35.0% |
| TGGGAGTTAAAAAACCAACA+AGG | - | chr2_1:76780070-76780089 | Msa0226260:intron | 35.0% | |
| AAACCAACAAGGAAAGGAAA+TGG | - | chr2_1:76780081-76780100 | Msa0226260:intron | 35.0% | |
| ! | GAGGTTGTAATAAGCTGTTT+TGG | + | chr2_1:76781702-76781721 | None:intergenic | 35.0% |
| ! | GAGGTTGTAATAAGCTGTTT+TGG | + | chr2_1:76781702-76781721 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTTGATAAAGACG+TGG | + | chr2_1:76780829-76780848 | None:intergenic | 35.0% |
| ! | GAGGTCGTAATAAGTTGTTT+TGG | + | chr2_1:76780451-76780470 | None:intergenic | 35.0% |
| AGCTGTATTTGAAAAAGACG+TGG | + | chr2_1:76780949-76780968 | None:intergenic | 35.0% | |
| ! | GAGGTTGTAAGAAGTTGTTT+TGG | + | chr2_1:76781173-76781192 | None:intergenic | 35.0% |
| ! | GAGGTTGTAATAAGCTGTTT+TGG | - | chr2_1:76781702-76781721 | Msa0226260:intron | 35.0% |
| !!! | AGCTGTTTTTGAAAAAGACG+TGG | - | chr2_1:76781746-76781765 | Msa0226260:intron | 35.0% |
| ! | GAGGTCGTAATAAGCTATTT+TGG | - | chr2_1:76781804-76781823 | Msa0226260:intron | 35.0% |
| !! | AGCTGATTTTGAAAAAGACG+TGG | - | chr2_1:76781848-76781867 | Msa0226260:intron | 35.0% |
| ! | GAGGTCGTAATAAGCTATTT+TGG | - | chr2_1:76781804-76781823 | Msa0226260:intron | 35.0% |
| !!! | AGCTGTTTTTGAAAAAGACG+TGG | - | chr2_1:76781746-76781765 | Msa0226260:intron | 35.0% |
| ! | GAGGTCGTAATAAGCTATTT+TGG | - | chr2_1:76781804-76781823 | Msa0226260:intron | 35.0% |
| !! | AGCTGATTTTGAAAAAGACG+TGG | - | chr2_1:76781848-76781867 | Msa0226260:intron | 35.0% |
| ! | TTTAAAGTTCCCCCAAATTG+GGG | + | chr2_1:76783199-76783218 | None:intergenic | 35.0% |
| ! | AAAACAAGGGAAAGGTTTTG+GGG | + | chr2_1:76783249-76783268 | None:intergenic | 35.0% |
| !!! | CCTGATAGTTGGTCTTTTAA+GGG | + | chr2_1:76783368-76783387 | None:intergenic | 35.0% |
| !!! | TCCTGATAGTTGGTCTTTTA+AGG | + | chr2_1:76783369-76783388 | None:intergenic | 35.0% |
| TAGCTCAACTAATTTACGGT+AGG | - | chr2_1:76783457-76783476 | Msa0226260:CDS | 35.0% | |
| AGCTCAACTAATTTACGGTA+GGG | - | chr2_1:76783458-76783477 | Msa0226260:CDS | 35.0% | |
| !! | GGCTCTTATCAGTTTTATGT+TGG | + | chr2_1:76783764-76783783 | None:intergenic | 35.0% |
| ! | AAAGATCAGGTGAAAGTGTA+TGG | + | chr2_1:76783785-76783804 | None:intergenic | 35.0% |
| ! | CTTTCACCTGATCTTTTTCT+AGG | - | chr2_1:76783789-76783808 | Msa0226260:CDS | 35.0% |
| TTAGCTCCTAGAAAAAGATC+AGG | + | chr2_1:76783798-76783817 | None:intergenic | 35.0% | |
| !! | GATCTTTTTCTAGGAGCTAA+TGG | - | chr2_1:76783798-76783817 | Msa0226260:CDS | 35.0% |
| GGAAGGAAAGAACTTGGAAT+TGG | + | chr2_1:76778249-76778268 | None:intergenic | 40.0% | |
| TTCTTTCCTTCCACACTCAA+TGG | - | chr2_1:76778257-76778276 | Msa0226260:CDS | 40.0% | |
| AAGATTCCATTGAGTGTGGA+AGG | + | chr2_1:76778266-76778285 | None:intergenic | 40.0% | |
| GTGATTGAGTTCTTGTTCAG+GGG | + | chr2_1:76778289-76778308 | None:intergenic | 40.0% | |
| GGTGATTGAGTTCTTGTTCA+GGG | + | chr2_1:76778290-76778309 | None:intergenic | 40.0% | |
| TGGTGATTGAGTTCTTGTTC+AGG | + | chr2_1:76778291-76778310 | None:intergenic | 40.0% | |
| !! | GTTTTGGATCATGAAGAAGG+TGG | - | chr2_1:76778462-76778481 | Msa0226260:intron | 40.0% |
| !! | CAAACTTTAGTAATGGGTGG+TGG | - | chr2_1:76778504-76778523 | Msa0226260:intron | 40.0% |
| !! | TGTGATGGTGGAAGTATTTG+TGG | - | chr2_1:76778537-76778556 | Msa0226260:intron | 40.0% |
| !! | AATGGTAGTGGAAGAGATTC+TGG | - | chr2_1:76778567-76778586 | Msa0226260:intron | 40.0% |
| TGGTGGAAATGGAAATGGAT+GGG | - | chr2_1:76778590-76778609 | Msa0226260:intron | 40.0% | |
| ATTAATTCCCCGCATTCATG+CGG | - | chr2_1:76778777-76778796 | Msa0226260:intron | 40.0% | |
| ! | GTCGGTACATTGATGATTGT+TGG | + | chr2_1:76778914-76778933 | None:intergenic | 40.0% |
| AAGTAGGTTCGTGGAGATTA+TGG | - | chr2_1:76779149-76779168 | Msa0226260:intron | 40.0% | |
| TGGAGATTATGGTAAAGCAG+AGG | - | chr2_1:76779160-76779179 | Msa0226260:intron | 40.0% | |
| ! | GATAAAGCATCAGCATCACT+AGG | + | chr2_1:76779215-76779234 | None:intergenic | 40.0% |
| !!! | GAGCTGAAGCCTATTTTGAT+AGG | - | chr2_1:76779279-76779298 | Msa0226260:intron | 40.0% |
| TAGAGACACCATATGTGACA+TGG | - | chr2_1:76779423-76779442 | Msa0226260:intron | 40.0% | |
| !!! | GCTTTGTTTGCGAGTTTTGA+GGG | - | chr2_1:76779970-76779989 | Msa0226260:intron | 40.0% |
| !!! | CTTTGTTTGCGAGTTTTGAG+GGG | - | chr2_1:76779971-76779990 | Msa0226260:intron | 40.0% |
| AGGGAAATATTCCCCTTGTT+TGG | - | chr2_1:76780050-76780069 | Msa0226260:intron | 40.0% | |
| ! | GGGAAATATTCCCCTTGTTT+GGG | - | chr2_1:76780051-76780070 | Msa0226260:intron | 40.0% |
| CAACAAGGAAAGGAAATGGA+GGG | - | chr2_1:76780085-76780104 | Msa0226260:intron | 40.0% | |
| ! | GAGGTCGTAATAAGCTGTTT+TGG | - | chr2_1:76782282-76782301 | Msa0226260:intron | 40.0% |
| ! | GAGGTCGTAATAAGCTGTTT+TGG | - | chr2_1:76782282-76782301 | Msa0226260:intron | 40.0% |
| TTAAAGTTCCCCCAAATTGG+GGG | + | chr2_1:76783198-76783217 | None:intergenic | 40.0% | |
| !! | AAACAAGGGAAAGGTTTTGG+GGG | + | chr2_1:76783248-76783267 | None:intergenic | 40.0% |
| !! | TTTGTTTGCGAGTTGGGTTT+TGG | + | chr2_1:76783332-76783351 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGCGAGTT+GGG | + | chr2_1:76783338-76783357 | None:intergenic | 40.0% |
| !! | TCTTTTAAGGGTGGACACTT+AGG | + | chr2_1:76783356-76783375 | None:intergenic | 40.0% |
| !!! | GATAGTTGGTCTTTTAAGGG+TGG | + | chr2_1:76783365-76783384 | None:intergenic | 40.0% |
| CCCTTAAAAGACCAACTATC+AGG | - | chr2_1:76783365-76783384 | Msa0226260:CDS | 40.0% | |
| AGACCAACTATCAGGAACAA+AGG | - | chr2_1:76783373-76783392 | Msa0226260:CDS | 40.0% | |
| CTTCCTTTGTTCCTGATAGT+TGG | + | chr2_1:76783379-76783398 | None:intergenic | 40.0% | |
| ACGGTAGGGTCAAAAAAAGT+TGG | - | chr2_1:76783472-76783491 | Msa0226260:CDS | 40.0% | |
| ! | AGTTGTTAGATTGGTCCACA+GGG | + | chr2_1:76783515-76783534 | None:intergenic | 40.0% |
| ! | TAGTTGTTAGATTGGTCCAC+AGG | + | chr2_1:76783516-76783535 | None:intergenic | 40.0% |
| TTATCACATCAGCTATGTCC+TGG | - | chr2_1:76783686-76783705 | Msa0226260:CDS | 40.0% | |
| ! | GGAATTTTGCATATGAAGCC+AGG | + | chr2_1:76783707-76783726 | None:intergenic | 40.0% |
| GAGTGTGGAAGGAAAGAACT+TGG | + | chr2_1:76778255-76778274 | None:intergenic | 45.0% | |
| !! | TTGCAAGTGTTCTAGGAAGG+TGG | + | chr2_1:76778311-76778330 | None:intergenic | 45.0% |
| !! | GACTTGCAAGTGTTCTAGGA+AGG | + | chr2_1:76778314-76778333 | None:intergenic | 45.0% |
| CTTGGACTTGCAAGTGTTCT+AGG | + | chr2_1:76778318-76778337 | None:intergenic | 45.0% | |
| !! | ACTTTAGTAATGGGTGGTGG+TGG | - | chr2_1:76778507-76778526 | Msa0226260:intron | 45.0% |
| !! | GATGGTGGAAGTATTTGTGG+TGG | - | chr2_1:76778540-76778559 | Msa0226260:intron | 45.0% |
| TGTGGTGGTTGTAATGGTAG+TGG | - | chr2_1:76778555-76778574 | Msa0226260:intron | 45.0% | |
| !! | AGAGATTCTGGTGGTGGAAA+TGG | - | chr2_1:76778579-76778598 | Msa0226260:intron | 45.0% |
| !! | TCTGGTGGTGGAAATGGAAA+TGG | - | chr2_1:76778585-76778604 | Msa0226260:intron | 45.0% |
| ! | GTGGTGGAAATGGAAATGGA+TGG | - | chr2_1:76778589-76778608 | Msa0226260:intron | 45.0% |
| ATGTGCTAACCGCATGAATG+CGG | + | chr2_1:76778789-76778808 | None:intergenic | 45.0% | |
| CAGTGGTTGTTGATCGAGAT+AGG | - | chr2_1:76778809-76778828 | Msa0226260:intron | 45.0% | |
| !! | ATCACTAGGGCTAGCCAAAA+TGG | + | chr2_1:76779201-76779220 | None:intergenic | 45.0% |
| !!! | GGCTTTGTTTGCGAGTTTTG+AGG | - | chr2_1:76779969-76779988 | Msa0226260:intron | 45.0% |
| !!! | TTTGCGAGTTTTGAGGGGAA+GGG | - | chr2_1:76779976-76779995 | Msa0226260:intron | 45.0% |
| CCTCCATTTCCTTTCCTTGT+TGG | + | chr2_1:76780087-76780106 | None:intergenic | 45.0% | |
| CCAACAAGGAAAGGAAATGG+AGG | - | chr2_1:76780084-76780103 | Msa0226260:intron | 45.0% | |
| ! | GAGGTCGTCATAAGCTGTTT+TGG | - | chr2_1:76781582-76781601 | Msa0226260:intron | 45.0% |
| TAAAGTTCCCCCAAATTGGG+GGG | + | chr2_1:76783197-76783216 | None:intergenic | 45.0% | |
| !!! | AGGTTTTGGGGGGTTTAGAA+GGG | + | chr2_1:76783237-76783256 | None:intergenic | 45.0% |
| !!! | AAGGTTTTGGGGGGTTTAGA+AGG | + | chr2_1:76783238-76783257 | None:intergenic | 45.0% |
| !!! | AACAAGGGAAAGGTTTTGGG+GGG | + | chr2_1:76783247-76783266 | None:intergenic | 45.0% |
| !!! | AGTTGGGTTTTGGAGAGGAA+GGG | + | chr2_1:76783322-76783341 | None:intergenic | 45.0% |
| !! | CTTAGGCTTTGTTTGCGAGT+TGG | + | chr2_1:76783339-76783358 | None:intergenic | 45.0% |
| TGGTCCACAGGGTTTGAATT+CGG | + | chr2_1:76783504-76783523 | None:intergenic | 45.0% | |
| !!! | TTTTTATTTTTAAGATAAAT+TGG | - | chr2_1:76779690-76779709 | Msa0226260:intron | 5.0% |
| !!! | TTATTTAATTTTTTTTATTG+TGG | - | chr2_1:76779748-76779767 | Msa0226260:intron | 5.0% |
| GGGGAAGATTCCATTGAGTG+TGG | + | chr2_1:76778270-76778289 | None:intergenic | 50.0% | |
| !! | AGTAATGGGTGGTGGTGGTA+TGG | - | chr2_1:76778512-76778531 | Msa0226260:intron | 50.0% |
| !! | GTAATGGGTGGTGGTGGTAT+GGG | - | chr2_1:76778513-76778532 | Msa0226260:intron | 50.0% |
| !! | TAATGGGTGGTGGTGGTATG+GGG | - | chr2_1:76778514-76778533 | Msa0226260:intron | 50.0% |
| !! | GGTAGTGGAAGAGATTCTGG+TGG | - | chr2_1:76778570-76778589 | Msa0226260:intron | 50.0% |
| AGTGGAAGAGATTCTGGTGG+TGG | - | chr2_1:76778573-76778592 | Msa0226260:intron | 50.0% | |
| TGTGCTAACCGCATGAATGC+GGG | + | chr2_1:76778788-76778807 | None:intergenic | 50.0% | |
| TCATGCGGTTAGCACATCAG+TGG | - | chr2_1:76778792-76778811 | Msa0226260:intron | 50.0% | |
| !!! | GTTTGCGAGTTTTGAGGGGA+AGG | - | chr2_1:76779975-76779994 | Msa0226260:intron | 50.0% |
| TTTGAGGGGAAGGGAAGGAA+AGG | - | chr2_1:76779985-76780004 | Msa0226260:intron | 50.0% | |
| AAGGGAAGGAAAGGCTTAGG+AGG | - | chr2_1:76779994-76780013 | Msa0226260:intron | 50.0% | |
| AGGGAAGGAAAGGCTTAGGA+GGG | - | chr2_1:76779995-76780014 | Msa0226260:intron | 50.0% | |
| GGAAGGAAAGGCTTATGGAG+AGG | + | chr2_1:76783296-76783315 | None:intergenic | 50.0% | |
| !!! | GAGTTGGGTTTTGGAGAGGA+AGG | + | chr2_1:76783323-76783342 | None:intergenic | 50.0% |
| !!! | TTGCGAGTTGGGTTTTGGAG+AGG | + | chr2_1:76783327-76783346 | None:intergenic | 50.0% |
| AACCCCGAATTCAAACCCTG+TGG | - | chr2_1:76783497-76783516 | Msa0226260:CDS | 50.0% | |
| GTCCACAGGGTTTGAATTCG+GGG | + | chr2_1:76783502-76783521 | None:intergenic | 50.0% | |
| GGTCCACAGGGTTTGAATTC+GGG | + | chr2_1:76783503-76783522 | None:intergenic | 50.0% | |
| CATCTTCTTCAGCGTCCCAT+AGG | + | chr2_1:76783728-76783747 | None:intergenic | 50.0% | |
| GTGCTAACCGCATGAATGCG+GGG | + | chr2_1:76778787-76778806 | None:intergenic | 55.0% | |
| !!! | CGAGTTTTGAGGGGAAGGGA+AGG | - | chr2_1:76779980-76779999 | Msa0226260:intron | 55.0% |
| GGGAAGGGAAGGAAAGGCTT+AGG | - | chr2_1:76779991-76780010 | Msa0226260:intron | 55.0% | |
| GGGAAGGAAAGGCTTAGGAG+GGG | - | chr2_1:76779996-76780015 | Msa0226260:intron | 55.0% | |
| AGGAAAGGCTTAGGAGGGGA+AGG | - | chr2_1:76780000-76780019 | Msa0226260:intron | 55.0% | |
| GGAAAGGCTTAGGAGGGGAA+GGG | - | chr2_1:76780001-76780020 | Msa0226260:intron | 55.0% | |
| TAGGAGGGGAAGGGAAGGAA+AGG | - | chr2_1:76780010-76780029 | Msa0226260:intron | 55.0% | |
| AGGAGGGGAAGGGAAGGAAA+GGG | - | chr2_1:76780011-76780030 | Msa0226260:intron | 55.0% | |
| AAGGGAAGGAAAGGGAGGGA+AGG | - | chr2_1:76780019-76780038 | Msa0226260:intron | 55.0% | |
| AGGGAAGGAAAGGGAGGGAA+GGG | - | chr2_1:76780020-76780039 | Msa0226260:intron | 55.0% | |
| GAAAGGGAGGGAAGGGAGAA+AGG | - | chr2_1:76780027-76780046 | Msa0226260:intron | 55.0% | |
| !!! | CCAAATTGGGGGGTTTTGGG+GGG | + | chr2_1:76783187-76783206 | None:intergenic | 55.0% |
| !! | CCCAAATTGGGGGGTTTTGG+GGG | + | chr2_1:76783188-76783207 | None:intergenic | 55.0% |
| CCCCCAAAACCCCCCAATTT+GGG | - | chr2_1:76783185-76783204 | Msa0226260:intron | 55.0% | |
| ! | CCCCAAATTGGGGGGTTTTG+GGG | + | chr2_1:76783189-76783208 | None:intergenic | 55.0% |
| CCCCAAAACCCCCCAATTTG+GGG | - | chr2_1:76783186-76783205 | Msa0226260:intron | 55.0% | |
| ! | CCCCCAAATTGGGGGGTTTT+GGG | + | chr2_1:76783190-76783209 | None:intergenic | 55.0% |
| CCCAAAACCCCCCAATTTGG+GGG | - | chr2_1:76783187-76783206 | Msa0226260:intron | 55.0% | |
| ! | TCCCCCAAATTGGGGGGTTT+TGG | + | chr2_1:76783191-76783210 | None:intergenic | 55.0% |
| GGAGGGGAAGGAAAGGCTTA+TGG | + | chr2_1:76783301-76783320 | None:intergenic | 55.0% | |
| !!! | GGTTTTGGAGAGGAAGGGAG+GGG | + | chr2_1:76783317-76783336 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGAGAGGAAGGGA+GGG | + | chr2_1:76783318-76783337 | None:intergenic | 55.0% |
| !!! | TGGGTTTTGGAGAGGAAGGG+AGG | + | chr2_1:76783319-76783338 | None:intergenic | 55.0% |
| ! | GGTGGTGGTATGGGGTGTGA+TGG | - | chr2_1:76778522-76778541 | Msa0226260:intron | 60.0% |
| GGTGGTATGGGGTGTGATGG+TGG | - | chr2_1:76778525-76778544 | Msa0226260:intron | 60.0% | |
| AGGCTTAGGAGGGGAAGGGA+AGG | - | chr2_1:76780005-76780024 | Msa0226260:intron | 60.0% | |
| AGGGGAAGGGAAGGAAAGGG+AGG | - | chr2_1:76780014-76780033 | Msa0226260:intron | 60.0% | |
| GGGGAAGGGAAGGAAAGGGA+GGG | - | chr2_1:76780015-76780034 | Msa0226260:intron | 60.0% | |
| AGGGAGGGAAGGGAGAAAGG+AGG | - | chr2_1:76780030-76780049 | Msa0226260:intron | 60.0% | |
| GGGAGGGAAGGGAGAAAGGA+GGG | - | chr2_1:76780031-76780050 | Msa0226260:intron | 60.0% | |
| CCCCCCAAAACCCCCCAATT+TGG | - | chr2_1:76783184-76783203 | Msa0226260:intron | 60.0% | |
| GAGGAAGGGAGGGGAAGGAA+AGG | + | chr2_1:76783308-76783327 | None:intergenic | 60.0% | |
| TTGGAGAGGAAGGGAGGGGA+AGG | + | chr2_1:76783313-76783332 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 76778222 | 76783854 | 76778222 | ID=Msa0226260;Name=Msa0226260 |
| chr2_1 | mRNA | 76778222 | 76783854 | 76778222 | ID=Msa0226260-mRNA-1;Parent=Msa0226260;Name=Msa0226260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|275 |
| chr2_1 | exon | 76783357 | 76783854 | 76783357 | ID=Msa0226260-mRNA-1:exon:23221;Parent=Msa0226260-mRNA-1 |
| chr2_1 | exon | 76782749 | 76782921 | 76782749 | ID=Msa0226260-mRNA-1:exon:23220;Parent=Msa0226260-mRNA-1 |
| chr2_1 | exon | 76778222 | 76778378 | 76778222 | ID=Msa0226260-mRNA-1:exon:23219;Parent=Msa0226260-mRNA-1 |
| chr2_1 | CDS | 76783357 | 76783854 | 76783357 | ID=Msa0226260-mRNA-1:cds;Parent=Msa0226260-mRNA-1 |
| chr2_1 | CDS | 76782749 | 76782921 | 76782749 | ID=Msa0226260-mRNA-1:cds;Parent=Msa0226260-mRNA-1 |
| chr2_1 | CDS | 76778222 | 76778378 | 76778222 | ID=Msa0226260-mRNA-1:cds;Parent=Msa0226260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
