Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103180 | XP_003588458.1 | 95.009 | 581 | 12 | 1 | 1 | 581 | 1 | 564 | 0.0 | 1131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103180 | G7I291 | 95.009 | 581 | 12 | 1 | 1 | 581 | 1 | 564 | 0.0 | 1131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0103180 | 0.816587 | 5.121741e-52 | -8.615850e-47 |
| Msa0003270 | Msa0103180 | 0.810418 | 1.164262e-50 | -8.615850e-47 |
| Msa0003720 | Msa0103180 | 0.802436 | 5.616574e-49 | -8.615850e-47 |
| Msa0007970 | Msa0103180 | 0.809981 | 1.446244e-50 | -8.615850e-47 |
| Msa0012940 | Msa0103180 | 0.825065 | 5.741627e-54 | -8.615850e-47 |
| Msa0026150 | Msa0103180 | 0.803159 | 3.982782e-49 | -8.615850e-47 |
| Msa0032370 | Msa0103180 | 0.818441 | 1.957292e-52 | -8.615850e-47 |
| Msa0039250 | Msa0103180 | 0.826179 | 3.126607e-54 | -8.615850e-47 |
| Msa0054530 | Msa0103180 | 0.804682 | 1.920899e-49 | -8.615850e-47 |
| Msa0057710 | Msa0103180 | 0.856539 | 3.005055e-62 | -8.615850e-47 |
| Msa0061340 | Msa0103180 | 0.813999 | 1.925815e-51 | -8.615850e-47 |
| Msa0069330 | Msa0103180 | 0.800891 | 1.164751e-48 | -8.615850e-47 |
| Msa0073670 | Msa0103180 | 0.828222 | 1.013829e-54 | -8.615850e-47 |
| Msa0094130 | Msa0103180 | 0.803422 | 3.512515e-49 | -8.615850e-47 |
| Msa0103180 | Msa0115090 | 0.801853 | 7.400652e-49 | -8.615850e-47 |
| Msa0103180 | Msa0127040 | 0.814991 | 1.161999e-51 | -8.615850e-47 |
| Msa0103180 | Msa0130240 | 0.838301 | 3.119348e-57 | -8.615850e-47 |
| Msa0103180 | Msa0133720 | 0.843169 | 1.653202e-58 | -8.615850e-47 |
| Msa0103180 | Msa0133820 | 0.847659 | 1.005606e-59 | -8.615850e-47 |
| Msa0103180 | Msa0134610 | 0.807652 | 4.551827e-50 | -8.615850e-47 |
| Msa0103180 | Msa0137610 | -0.801327 | 9.487931e-49 | -8.615850e-47 |
| Msa0103180 | Msa0144360 | 0.819855 | 9.327503e-53 | -8.615850e-47 |
| Msa0103180 | Msa0146280 | 0.835345 | 1.771110e-56 | -8.615850e-47 |
| Msa0103180 | Msa0152400 | 0.821669 | 3.571251e-53 | -8.615850e-47 |
| Msa0103180 | Msa0156230 | 0.804127 | 2.507074e-49 | -8.615850e-47 |
| Msa0103180 | Msa0197780 | 0.815514 | 8.891094e-52 | -8.615850e-47 |
| Msa0103180 | Msa0225180 | 0.804481 | 2.116344e-49 | -8.615850e-47 |
| Msa0103180 | Msa0260620 | 0.800991 | 1.111491e-48 | -8.615850e-47 |
| Msa0103180 | Msa0263080 | 0.812124 | 4.963167e-51 | -8.615850e-47 |
| Msa0103180 | Msa0279390 | 0.802471 | 5.524036e-49 | -8.615850e-47 |
| Msa0103180 | Msa0307850 | 0.820373 | 7.099735e-53 | -8.615850e-47 |
| Msa0103180 | Msa0318880 | 0.826594 | 2.490332e-54 | -8.615850e-47 |
| Msa0103180 | Msa0322590 | 0.804967 | 1.675269e-49 | -8.615850e-47 |
| Msa0103180 | Msa0333160 | 0.807961 | 3.913743e-50 | -8.615850e-47 |
| Msa0103180 | Msa0334040 | 0.815801 | 7.672968e-52 | -8.615850e-47 |
| Msa0103180 | Msa0363400 | 0.806027 | 1.003871e-49 | -8.615850e-47 |
| Msa0103180 | Msa0387950 | 0.844069 | 9.496129e-59 | -8.615850e-47 |
| Msa0103180 | Msa0410500 | 0.828821 | 7.263502e-55 | -8.615850e-47 |
| Msa0103180 | Msa0410870 | 0.804679 | 1.923999e-49 | -8.615850e-47 |
| Msa0103180 | Msa0427220 | 0.818653 | 1.752290e-52 | -8.615850e-47 |
| Msa0103180 | Msa0431770 | 0.809155 | 2.176162e-50 | -8.615850e-47 |
| Msa0103180 | Msa0475790 | 0.811584 | 6.508178e-51 | -8.615850e-47 |
| Msa0103180 | Msa0484290 | 0.803370 | 3.600121e-49 | -8.615850e-47 |
| Msa0103180 | Msa0510290 | 0.823924 | 1.065958e-53 | -8.615850e-47 |
| Msa0103180 | Msa0516120 | 0.820631 | 6.193308e-53 | -8.615850e-47 |
| Msa0103180 | Msa0531250 | 0.801090 | 1.060764e-48 | -8.615850e-47 |
| Msa0103180 | Msa0547020 | 0.828409 | 9.134300e-55 | -8.615850e-47 |
| Msa0103180 | Msa0556010 | 0.807306 | 5.391895e-50 | -8.615850e-47 |
| Msa0103180 | Msa0560470 | 0.804200 | 2.421564e-49 | -8.615850e-47 |
| Msa0103180 | Msa0576680 | 0.811299 | 7.502915e-51 | -8.615850e-47 |
| Msa0103180 | Msa0576690 | 0.817572 | 3.076715e-52 | -8.615850e-47 |
| Msa0103180 | Msa0578090 | 0.802971 | 4.354616e-49 | -8.615850e-47 |
| Msa0103180 | Msa0642880 | 0.804917 | 1.716075e-49 | -8.615850e-47 |
| Msa0103180 | Msa0684500 | 0.800596 | 1.338076e-48 | -8.615850e-47 |
| Msa0103180 | Msa0687450 | 0.808809 | 2.580692e-50 | -8.615850e-47 |
| Msa0103180 | Msa0689760 | 0.807454 | 5.014510e-50 | -8.615850e-47 |
| Msa0103180 | Msa0695130 | 0.811151 | 8.081038e-51 | -8.615850e-47 |
| Msa0103180 | Msa0716860 | 0.802847 | 4.619156e-49 | -8.615850e-47 |
| Msa0103180 | Msa0734960 | 0.835911 | 1.273940e-56 | -8.615850e-47 |
| Msa0103180 | Msa0749400 | 0.803258 | 3.797769e-49 | -8.615850e-47 |
| Msa0103180 | Msa0752510 | 0.803307 | 3.710998e-49 | -8.615850e-47 |
| Msa0103180 | Msa0767100 | 0.802529 | 5.373866e-49 | -8.615850e-47 |
| Msa0103180 | Msa0788770 | 0.812000 | 5.282615e-51 | -8.615850e-47 |
| Msa0103180 | Msa0790400 | 0.804809 | 1.807661e-49 | -8.615850e-47 |
| Msa0103180 | Msa0807610 | 0.803081 | 4.132712e-49 | -8.615850e-47 |
| Msa0103180 | Msa0809980 | 0.806190 | 9.277247e-50 | -8.615850e-47 |
| Msa0103180 | Msa0814630 | -0.807780 | 4.276593e-50 | -8.615850e-47 |
| Msa0103180 | Msa0818630 | 0.808922 | 2.440763e-50 | -8.615850e-47 |
| Msa0103180 | Msa0850150 | 0.825376 | 4.849906e-54 | -8.615850e-47 |
| Msa0103180 | Msa0855160 | -0.808076 | 3.698308e-50 | -8.615850e-47 |
| Msa0103180 | Msa0861510 | 0.808602 | 2.856777e-50 | -8.615850e-47 |
| Msa0103180 | Msa0861530 | 0.803963 | 2.712857e-49 | -8.615850e-47 |
| Msa0103180 | Msa0861600 | 0.807360 | 5.251230e-50 | -8.615850e-47 |
| Msa0103180 | Msa0869010 | 0.804332 | 2.272379e-49 | -8.615850e-47 |
| Msa0103180 | Msa0880040 | 0.801564 | 8.485135e-49 | -8.615850e-47 |
| Msa0103180 | Msa0888940 | 0.848347 | 6.495670e-60 | -8.615850e-47 |
| Msa0103180 | Msa0898760 | 0.801966 | 7.017648e-49 | -8.615850e-47 |
| Msa0103180 | Msa0928120 | 0.800733 | 1.255108e-48 | -8.615850e-47 |
| Msa0103180 | Msa0930780 | 0.836411 | 9.507974e-57 | -8.615850e-47 |
| Msa0103180 | Msa0944660 | 0.851897 | 6.577427e-61 | -8.615850e-47 |
| Msa0103180 | Msa0961690 | 0.805391 | 1.365714e-49 | -8.615850e-47 |
| Msa0103180 | Msa0963020 | 0.802606 | 5.181078e-49 | -8.615850e-47 |
| Msa0103180 | Msa0980940 | 0.842040 | 3.296039e-58 | -8.615850e-47 |
| Msa0103180 | Msa0985550 | 0.807483 | 4.944051e-50 | -8.615850e-47 |
| Msa0103180 | Msa0996020 | 0.803505 | 3.375894e-49 | -8.615850e-47 |
| Msa0103180 | Msa1004420 | 0.815898 | 7.300515e-52 | -8.615850e-47 |
| Msa0103180 | Msa1009750 | 0.829732 | 4.367051e-55 | -8.615850e-47 |
| Msa0103180 | Msa1010070 | 0.822731 | 2.025222e-53 | -8.615850e-47 |
| Msa0103180 | Msa1017510 | 0.800439 | 1.440751e-48 | -8.615850e-47 |
| Msa0103180 | Msa1027250 | 0.800465 | 1.423154e-48 | -8.615850e-47 |
| Msa0103180 | Msa1027360 | 0.809864 | 1.532797e-50 | -8.615850e-47 |
| Msa0103180 | Msa1041210 | 0.803534 | 3.329528e-49 | -8.615850e-47 |
| Msa0103180 | Msa1050910 | 0.803975 | 2.696879e-49 | -8.615850e-47 |
| Msa0103180 | Msa1051600 | 0.826845 | 2.169082e-54 | -8.615850e-47 |
| Msa0103180 | Msa1051990 | 0.800602 | 1.334353e-48 | -8.615850e-47 |
| Msa0103180 | Msa1055010 | 0.817373 | 3.411168e-52 | -8.615850e-47 |
| Msa0103180 | Msa1063950 | 0.802148 | 6.438331e-49 | -8.615850e-47 |
| Msa0103180 | Msa1093840 | 0.814633 | 1.394711e-51 | -8.615850e-47 |
| Msa0103180 | Msa1097820 | 0.835870 | 1.304841e-56 | -8.615850e-47 |
| Msa0103180 | Msa1102770 | 0.804100 | 2.540343e-49 | -8.615850e-47 |
| Msa0103180 | Msa1113590 | 0.806934 | 6.463987e-50 | -8.615850e-47 |
| Msa0103180 | Msa1127540 | 0.831002 | 2.136115e-55 | -8.615850e-47 |
| Msa0103180 | Msa1127590 | 0.803349 | 3.637076e-49 | -8.615850e-47 |
| Msa0103180 | Msa1129690 | 0.804009 | 2.653010e-49 | -8.615850e-47 |
| Msa0103180 | Msa1157870 | 0.801625 | 8.243569e-49 | -8.615850e-47 |
| Msa0103180 | Msa1165740 | 0.804544 | 2.053310e-49 | -8.615850e-47 |
| Msa0103180 | Msa1174100 | 0.839602 | 1.436357e-57 | -8.615850e-47 |
| Msa0103180 | Msa1174530 | 0.804486 | 2.111232e-49 | -8.615850e-47 |
| Msa0103180 | Msa1192850 | 0.835710 | 1.432439e-56 | -8.615850e-47 |
| Msa0103180 | Msa1201640 | 0.819737 | 9.923744e-53 | -8.615850e-47 |
| Msa0103180 | Msa1201810 | 0.830958 | 2.190270e-55 | -8.615850e-47 |
| Msa0103180 | Msa1201830 | 0.811783 | 5.890125e-51 | -8.615850e-47 |
| Msa0103180 | Msa1202580 | 0.805809 | 1.115719e-49 | -8.615850e-47 |
| Msa0103180 | Msa1211340 | 0.801594 | 8.364903e-49 | -8.615850e-47 |
| Msa0103180 | Msa1224830 | 0.805721 | 1.164139e-49 | -8.615850e-47 |
| Msa0103180 | Msa1235250 | 0.826436 | 2.716065e-54 | -8.615850e-47 |
| Msa0103180 | Msa1252190 | 0.823835 | 1.118320e-53 | -8.615850e-47 |
| Msa0103180 | Msa1274280 | 0.810107 | 1.358342e-50 | -8.615850e-47 |
| Msa0103180 | Msa1276660 | 0.817955 | 2.521648e-52 | -8.615850e-47 |
| Msa0103180 | Msa1292830 | 0.802379 | 5.768554e-49 | -8.615850e-47 |
| Msa0103180 | Msa1299360 | 0.808373 | 3.197693e-50 | -8.615850e-47 |
| Msa0103180 | Msa1303250 | 0.810423 | 1.161147e-50 | -8.615850e-47 |
| Msa0103180 | Msa1306390 | 0.822697 | 2.062455e-53 | -8.615850e-47 |
| Msa0103180 | Msa1327490 | 0.841877 | 3.639920e-58 | -8.615850e-47 |
| Msa0103180 | Msa1329790 | 0.802057 | 6.720825e-49 | -8.615850e-47 |
| Msa0103180 | Msa1341070 | 0.814787 | 1.289582e-51 | -8.615850e-47 |
| Msa0103180 | Msa1356610 | 0.800258 | 1.568336e-48 | -8.615850e-47 |
| Msa0103180 | Msa1364430 | 0.804129 | 2.504805e-49 | -8.615850e-47 |
| Msa0103180 | Msa1369150 | 0.807475 | 4.963864e-50 | -8.615850e-47 |
| Msa0103180 | Msa1374060 | 0.832371 | 9.819424e-56 | -8.615850e-47 |
| Msa0103180 | Msa1406040 | 0.833179 | 6.186575e-56 | -8.615850e-47 |
| Msa0103180 | Msa1409950 | 0.804990 | 1.656881e-49 | -8.615850e-47 |
| Msa0103180 | Msa1411500 | 0.813975 | 1.949360e-51 | -8.615850e-47 |
| Msa0103180 | Msa1411950 | 0.803229 | 3.851746e-49 | -8.615850e-47 |
| Msa0103180 | Msa1418260 | 0.802117 | 6.531982e-49 | -8.615850e-47 |
| Msa0103180 | Msa1420250 | 0.808328 | 3.268383e-50 | -8.615850e-47 |
| Msa0103180 | Msa1424780 | 0.803512 | 3.365354e-49 | -8.615850e-47 |
| Msa0103180 | Msa1443300 | 0.809480 | 1.853143e-50 | -8.615850e-47 |
| Msa0103180 | Msa1443930 | 0.823095 | 1.665603e-53 | -8.615850e-47 |
| Msa0103180 | Msa1450720 | 0.820001 | 8.639652e-53 | -8.615850e-47 |
| Msa0103180 | Msa1459180 | 0.803839 | 2.878881e-49 | -8.615850e-47 |
| Msa0103180 | Msa1466460 | 0.805393 | 1.364082e-49 | -8.615850e-47 |
| Msa0103180 | Msa1466590 | 0.805883 | 1.076349e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103180 | MtrunA17_Chr1g0146551 | 95.009 | 581 | 12 | 1 | 1 | 581 | 1 | 564 | 0.0 | 1131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103180 | AT5G05240.2 | 38.929 | 411 | 189 | 12 | 188 | 581 | 85 | 450 | 3.86e-79 | 258 |
| Msa0103180 | AT5G05240.1 | 38.929 | 411 | 189 | 12 | 188 | 581 | 144 | 509 | 1.95e-78 | 258 |
| Msa0103180 | AT2G40630.2 | 44.538 | 119 | 62 | 2 | 435 | 549 | 365 | 483 | 2.18e-22 | 101 |
| Msa0103180 | AT2G40630.2 | 42.188 | 128 | 59 | 4 | 199 | 311 | 203 | 330 | 5.24e-20 | 94.0 |
| Msa0103180 | AT2G40630.1 | 44.538 | 119 | 62 | 2 | 435 | 549 | 365 | 483 | 2.64e-22 | 101 |
| Msa0103180 | AT2G40630.1 | 44.915 | 118 | 50 | 4 | 199 | 301 | 203 | 320 | 5.34e-20 | 94.4 |
| Msa0103180 | AT2G40630.3 | 42.188 | 128 | 59 | 4 | 199 | 311 | 203 | 330 | 3.18e-20 | 93.6 |
Find 133 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCCATACACGATTGAAAT+TGG | 0.142251 | 1_3:-10285018 | None:intergenic |
| CATTTGATGCACAATCTTTA+AGG | 0.151074 | 1_3:-10286766 | None:intergenic |
| TCTCGTGACAAAACAATAAA+AGG | 0.177223 | 1_3:+10284807 | Msa0103180:five_prime_UTR |
| GAACGAGTCCTCATGGATTT+TGG | 0.192385 | 1_3:+10286697 | Msa0103180:CDS |
| TTCCTTATGTCGAAGGAATT+TGG | 0.203422 | 1_3:+10287437 | Msa0103180:CDS |
| GTTTCATCTCTTTCTCTAAA+AGG | 0.205093 | 1_3:+10286899 | Msa0103180:CDS |
| ATCGGGTAGTCCCAGGGTTT+TGG | 0.259058 | 1_3:+10285956 | Msa0103180:CDS |
| TCGCATCTTTCACATGTTCT+AGG | 0.282682 | 1_3:-10286619 | None:intergenic |
| CTCATTGGATCTCTCTCCTT+TGG | 0.293606 | 1_3:-10286257 | None:intergenic |
| TGATTCTTCATTCGACATAT+TGG | 0.315817 | 1_3:-10286861 | None:intergenic |
| GGGTTTGTGTGAAGTGAAAA+TGG | 0.319326 | 1_3:-10284954 | None:intergenic |
| ATTTCAACTTCAACTGTTCA+TGG | 0.332360 | 1_3:+10286311 | Msa0103180:CDS |
| GACATCAAAGGGCGTCTTGC+GGG | 0.344234 | 1_3:+10287267 | Msa0103180:CDS |
| CAAGAGATTCAATAATTGTT+TGG | 0.346689 | 1_3:-10286511 | None:intergenic |
| AACATTGTTCAATCGTCATT+TGG | 0.348124 | 1_3:+10285849 | Msa0103180:CDS |
| TACCACAAGGATCATAATTC+TGG | 0.358167 | 1_3:-10287466 | None:intergenic |
| ATCCATACACGATTGAAATT+GGG | 0.362060 | 1_3:-10285017 | None:intergenic |
| TATGGTACAGAAAAGGCAAT+TGG | 0.362075 | 1_3:+10285819 | Msa0103180:intron |
| CCGGATAAAAGCAGTGGATT+TGG | 0.363540 | 1_3:+10286023 | Msa0103180:CDS |
| ATCTCTGTCCATATTCTCAT+TGG | 0.363658 | 1_3:-10286272 | None:intergenic |
| CGGATACAATGAAGGATATC+TGG | 0.365233 | 1_3:-10286003 | None:intergenic |
| AGAGAGATCCAATGAGAATA+TGG | 0.366976 | 1_3:+10286264 | Msa0103180:CDS |
| GACTGCGTTGTTTGATCATA+TGG | 0.368849 | 1_3:+10287547 | Msa0103180:CDS |
| AGAAGAAAGAGAAAAGGGTT+TGG | 0.378076 | 1_3:-10284989 | None:intergenic |
| CTCCAAATTCCTTCGACATA+AGG | 0.391145 | 1_3:-10287439 | None:intergenic |
| TCCCCAATTTCAATCGTGTA+TGG | 0.394336 | 1_3:+10285015 | Msa0103180:exon |
| AAAGCAATTGCTATGTGATC+AGG | 0.401348 | 1_3:+10288176 | Msa0103180:CDS |
| GGAAAGAGAAGAAAGAGAAA+AGG | 0.405697 | 1_3:-10284995 | None:intergenic |
| GAAAGAGAAGAAAGAGAAAA+GGG | 0.406997 | 1_3:-10284994 | None:intergenic |
| CTGCTACTGTTGCTTCTCAA+TGG | 0.416406 | 1_3:+10287226 | Msa0103180:CDS |
| ATAAACTGGAGCAAGGGTTA+TGG | 0.416768 | 1_3:+10288210 | Msa0103180:CDS |
| CAAGATGGAAGGAGCACATC+GGG | 0.417047 | 1_3:+10285939 | Msa0103180:CDS |
| GTTCATAATTTCAGGAAAGT+TGG | 0.420315 | 1_3:+10288136 | Msa0103180:intron |
| ATTGGATCTCTCTCCTTTGG+AGG | 0.421393 | 1_3:-10286254 | None:intergenic |
| CTCCCGCGTTTCTTTGGCAC+CGG | 0.423376 | 1_3:-10286341 | None:intergenic |
| TTGTCACGAGACAGATCTAT+AGG | 0.426391 | 1_3:-10284795 | None:intergenic |
| AGGGCGTGCAACATATAAAC+TGG | 0.427742 | 1_3:+10288196 | Msa0103180:CDS |
| AACGAACCTTTGAAGCAGAT+TGG | 0.437603 | 1_3:-10285078 | None:intergenic |
| CAGATATCCTTCATTGTATC+CGG | 0.438823 | 1_3:+10286004 | Msa0103180:CDS |
| CAAAGAGAGAACAAATCAAC+AGG | 0.439385 | 1_3:+10286405 | Msa0103180:CDS |
| AACTGTTCATGGAGGCATTC+CGG | 0.439849 | 1_3:+10286322 | Msa0103180:CDS |
| GGAATTGTTGTCGGAAAAGC+AGG | 0.454962 | 1_3:+10286067 | Msa0103180:CDS |
| TACTGTTGCTTCTCAATGGT+TGG | 0.455636 | 1_3:+10287230 | Msa0103180:CDS |
| AAAATCAAATATATATAAGA+AGG | 0.462198 | 1_3:+10287125 | Msa0103180:CDS |
| GATCTTAACACTGAAGTTTG+TGG | 0.464864 | 1_3:+10285978 | Msa0103180:CDS |
| TGTTCTTTGTGAAAACTTGT+TGG | 0.467575 | 1_3:-10286182 | None:intergenic |
| TCAAAGGATTTGTCTGAGAG+TGG | 0.474683 | 1_3:+10286218 | Msa0103180:CDS |
| CTTACATGATTAATAATCCC+AGG | 0.474734 | 1_3:-10286473 | None:intergenic |
| GACCGTCCAATCTGCTTCAA+AGG | 0.478163 | 1_3:+10285072 | Msa0103180:CDS |
| ATGGTACAGAAAAGGCAATT+GGG | 0.483116 | 1_3:+10285820 | Msa0103180:intron |
| TCATGTAAGAAATAGAAAAC+AGG | 0.494158 | 1_3:+10286487 | Msa0103180:CDS |
| TTAGGTGATGAGTGAGAAGA+GGG | 0.497120 | 1_3:+10285176 | Msa0103180:intron |
| TTCTACATCAAGACATCAAA+GGG | 0.503298 | 1_3:+10287256 | Msa0103180:CDS |
| CATCGAATGAGTGGAAGTAT+AGG | 0.503503 | 1_3:+10286581 | Msa0103180:CDS |
| CTTGAATCTGTGGTTGCTGC+AGG | 0.503538 | 1_3:+10285258 | Msa0103180:CDS |
| GGAGCACATCGGGTAGTCCC+AGG | 0.505732 | 1_3:+10285949 | Msa0103180:CDS |
| TTCTTCATTCGACATATTGG+TGG | 0.507223 | 1_3:-10286858 | None:intergenic |
| CTACTGAATGATTTAAACCC+TGG | 0.508197 | 1_3:+10286455 | Msa0103180:CDS |
| TAAAATAGCAGAGTTGCATC+AGG | 0.508788 | 1_3:+10287517 | Msa0103180:CDS |
| TGGACAGAGATGAAGCGAAA+TGG | 0.511689 | 1_3:+10286284 | Msa0103180:CDS |
| CAGCTTTGCGTCGCAGTAGG+AGG | 0.512130 | 1_3:+10287381 | Msa0103180:intron |
| AAAATAGGAGCATAGGAAGT+AGG | 0.512534 | 1_3:+10286549 | Msa0103180:CDS |
| TCCATACACGATTGAAATTG+GGG | 0.514783 | 1_3:-10285016 | None:intergenic |
| TACTGAATGATTTAAACCCT+GGG | 0.522493 | 1_3:+10286456 | Msa0103180:CDS |
| CAGAGTTGCATCAGGCAAGA+TGG | 0.523605 | 1_3:+10287525 | Msa0103180:CDS |
| GGTGCCTTTGTCAGTGGACG+TGG | 0.524014 | 1_3:+10285899 | Msa0103180:CDS |
| ATCATCTCAAATAGACATCT+CGG | 0.527484 | 1_3:+10291370 | Msa0103180:CDS |
| GAAATTGTCATCTTCAATGA+AGG | 0.527882 | 1_3:+10286823 | Msa0103180:CDS |
| TTACTAGTCGGAAGTCCCTC+AGG | 0.529587 | 1_3:-10287497 | None:intergenic |
| AAATCATTCAGTAGTCCACT+TGG | 0.530652 | 1_3:-10286446 | None:intergenic |
| TGACAAAGAACGAGTCCTCA+TGG | 0.531969 | 1_3:+10286690 | Msa0103180:CDS |
| ATGGAGAAAACATGGAGTGC+AGG | 0.532541 | 1_3:+10291985 | Msa0103180:CDS |
| TAAGGAGAAGGAATTGTTGT+CGG | 0.533565 | 1_3:+10286058 | Msa0103180:CDS |
| CTCGTGACAAAACAATAAAA+GGG | 0.536166 | 1_3:+10284808 | Msa0103180:five_prime_UTR |
| TGTGAGTGTGTTTAAGAGAG+TGG | 0.550688 | 1_3:-10284922 | None:intergenic |
| TTGTAGAAATGGAGAAAACA+TGG | 0.551955 | 1_3:+10291977 | Msa0103180:CDS |
| TGATACTAGATCCGTGAATG+TGG | 0.555113 | 1_3:+10286157 | Msa0103180:CDS |
| ACTTGTTGGTCCCACATTCA+CGG | 0.556729 | 1_3:-10286168 | None:intergenic |
| GTTGCCTTTCCTTATGTCGA+AGG | 0.558470 | 1_3:+10287430 | Msa0103180:CDS |
| AAACACGAAAATAGGAGCAT+AGG | 0.561239 | 1_3:+10286542 | Msa0103180:CDS |
| AAATCAAATATATATAAGAA+GGG | 0.565456 | 1_3:+10287126 | Msa0103180:CDS |
| TTACAGCTTTGCGTCGCAGT+AGG | 0.568245 | 1_3:+10287378 | Msa0103180:intron |
| CAACTTCAGAAAATCACTCC+AGG | 0.571349 | 1_3:+10288247 | Msa0103180:CDS |
| CACCAAGGTGCCTTTGTCAG+TGG | 0.574240 | 1_3:+10285893 | Msa0103180:CDS |
| CTTCTACATCAAGACATCAA+AGG | 0.576241 | 1_3:+10287255 | Msa0103180:CDS |
| TTACATGATTAATAATCCCA+GGG | 0.576690 | 1_3:-10286472 | None:intergenic |
| CAAAAGAAGAGCAAGATGGA+AGG | 0.579626 | 1_3:+10285928 | Msa0103180:CDS |
| AGACATCAAAGGGCGTCTTG+CGG | 0.583767 | 1_3:+10287266 | Msa0103180:CDS |
| GGATGAAGCACTTATTGAAG+AGG | 0.586487 | 1_3:+10287568 | Msa0103180:CDS |
| TGAGAAACTCAGTAAGGAGA+AGG | 0.588059 | 1_3:+10286046 | Msa0103180:CDS |
| TTTAGGTGATGAGTGAGAAG+AGG | 0.588914 | 1_3:+10285175 | Msa0103180:intron |
| TTCATGCTTATCTCCCAAGT+GGG | 0.592567 | 1_3:-10285205 | None:intergenic |
| AAGCAATTGCTATGTGATCA+GGG | 0.593015 | 1_3:+10288177 | Msa0103180:CDS |
| TTGTATCCGGATAAAAGCAG+TGG | 0.593470 | 1_3:+10286017 | Msa0103180:CDS |
| CAAAGGATTTGTCTGAGAGT+GGG | 0.595800 | 1_3:+10286219 | Msa0103180:CDS |
| GAAGAGGGTTAATACCCACT+TGG | 0.597622 | 1_3:+10285191 | Msa0103180:CDS |
| GTTTCAAAAGAAGAGCAAGA+TGG | 0.600220 | 1_3:+10285924 | Msa0103180:CDS |
| GCAACATATAAACTGGAGCA+AGG | 0.601221 | 1_3:+10288203 | Msa0103180:CDS |
| GTGTTAAGATCCAAAACCCT+GGG | 0.601860 | 1_3:-10285966 | None:intergenic |
| AACCTTTGAAGCAGATTGGA+CGG | 0.604309 | 1_3:-10285074 | None:intergenic |
| CAGGAAAGAGAACAACTTGG+TGG | 0.607354 | 1_3:+10286086 | Msa0103180:CDS |
| GAAGTATAGGCGTTAACAAG+AGG | 0.608696 | 1_3:+10286594 | Msa0103180:CDS |
| AATGAAAGATCTTGAATCTG+TGG | 0.610845 | 1_3:+10285248 | Msa0103180:CDS |
| TTCCGGTGCCAAAGAAACGC+GGG | 0.612331 | 1_3:+10286339 | Msa0103180:CDS |
| GTCCACTGACAAAGGCACCT+TGG | 0.612422 | 1_3:-10285895 | None:intergenic |
| AAGAGGGTTAATACCCACTT+GGG | 0.613767 | 1_3:+10285192 | Msa0103180:CDS |
| ACATCCACGTCCACTGACAA+AGG | 0.613781 | 1_3:-10285903 | None:intergenic |
| CAAGCAGCACATCGAATGAG+TGG | 0.614102 | 1_3:+10286572 | Msa0103180:CDS |
| GAGCAGTGCTGAACCTCCAA+AGG | 0.617641 | 1_3:+10286241 | Msa0103180:CDS |
| ATTTGGTGAGAAACTCAGTA+AGG | 0.617815 | 1_3:+10286040 | Msa0103180:CDS |
| GAAAGAGAACAACTTGGTGG+TGG | 0.618516 | 1_3:+10286089 | Msa0103180:CDS |
| TTGTGGTATGAAATTTCCTG+AGG | 0.620717 | 1_3:+10287481 | Msa0103180:CDS |
| ACAAAGATTGCAGCTCCAAG+TGG | 0.624079 | 1_3:+10286431 | Msa0103180:CDS |
| AAGTATAGGCGTTAACAAGA+GGG | 0.629743 | 1_3:+10286595 | Msa0103180:CDS |
| AGTGTTAAGATCCAAAACCC+TGG | 0.632315 | 1_3:-10285967 | None:intergenic |
| AATTCCTTCGACATAAGGAA+AGG | 0.634583 | 1_3:-10287434 | None:intergenic |
| TGTGGTATGAAATTTCCTGA+GGG | 0.635397 | 1_3:+10287482 | Msa0103180:CDS |
| GAGCACATCGGGTAGTCCCA+GGG | 0.635736 | 1_3:+10285950 | Msa0103180:CDS |
| GATACTAGATCCGTGAATGT+GGG | 0.637534 | 1_3:+10286158 | Msa0103180:CDS |
| ATTCCGGTGCCAAAGAAACG+CGG | 0.642368 | 1_3:+10286338 | Msa0103180:CDS |
| CAACATATAAACTGGAGCAA+GGG | 0.643176 | 1_3:+10288204 | Msa0103180:CDS |
| GCAAGATGGAAGGAGCACAT+CGG | 0.648843 | 1_3:+10285938 | Msa0103180:CDS |
| AGAATCATCAAATGTTACAA+CGG | 0.650924 | 1_3:+10286877 | Msa0103180:CDS |
| GACCAGAATTATGATCCTTG+TGG | 0.652264 | 1_3:+10287464 | Msa0103180:CDS |
| AAGCAGGAAAGAGAACAACT+TGG | 0.671542 | 1_3:+10286083 | Msa0103180:CDS |
| GTTCATGCTTATCTCCCAAG+TGG | 0.674448 | 1_3:-10285206 | None:intergenic |
| TCAACTTCAACTGTTCATGG+AGG | 0.674980 | 1_3:+10286314 | Msa0103180:CDS |
| TCAGGAAATTTCATACCACA+AGG | 0.683637 | 1_3:-10287479 | None:intergenic |
| CGGTGCCAAAGAAACGCGGG+AGG | 0.698051 | 1_3:+10286342 | Msa0103180:CDS |
| GAACACGAGAGGAATTAATG+TGG | 0.701018 | 1_3:+10286118 | Msa0103180:CDS |
| TGAGATGTCACAAATCACCA+AGG | 0.717810 | 1_3:+10285878 | Msa0103180:CDS |
| GGTGGTGATGTGAACACGAG+AGG | 0.718627 | 1_3:+10286107 | Msa0103180:CDS |
| TTTACCCTCCAAAATCCATG+AGG | 0.742859 | 1_3:-10286705 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTTTAAAATAAATT+TGG | + | chr1_3:10290667-10290686 | Msa0103180:intron | 0.0% |
| !!! | AATTGAAATTGAATTTTTTT+GGG | - | chr1_3:10284871-10284890 | None:intergenic | 10.0% |
| !!! | AAATTGAAATTGAATTTTTT+TGG | - | chr1_3:10284872-10284891 | None:intergenic | 10.0% |
| !! | AAAATCAAATATATATAAGA+AGG | + | chr1_3:10287125-10287144 | Msa0103180:CDS | 10.0% |
| !! | AAATCAAATATATATAAGAA+GGG | + | chr1_3:10287126-10287145 | Msa0103180:CDS | 10.0% |
| !!! | AACTTTAAAAGAAATAAATA+TGG | - | chr1_3:10287298-10287317 | None:intergenic | 10.0% |
| !!! | TTTCTTTTAAAGTTTTTAAA+CGG | + | chr1_3:10287304-10287323 | Msa0103180:intron | 10.0% |
| !! | TAATATAATAAAGATAAAAG+AGG | + | chr1_3:10290711-10290730 | Msa0103180:intron | 10.0% |
| !!! | ATTGAAATTGAATTTTTTTG+GGG | - | chr1_3:10284870-10284889 | None:intergenic | 15.0% |
| !!! | GTTTTGATTTTTTTTTTTTC+TGG | + | chr1_3:10285152-10285171 | Msa0103180:intron | 15.0% |
| !!! | ATTTTTTTTTTTTCTGGTTT+AGG | + | chr1_3:10285158-10285177 | Msa0103180:intron | 15.0% |
| !! | TGTAAATGATATTTCATATT+TGG | + | chr1_3:10285399-10285418 | Msa0103180:intron | 15.0% |
| !! | ACTTTATGAATATTCATAAA+AGG | - | chr1_3:10285669-10285688 | None:intergenic | 15.0% |
| !! | AATAATGCATAATAAAAACA+AGG | + | chr1_3:10286975-10286994 | Msa0103180:intron | 15.0% |
| !! | ATAATGCATAATAAAAACAA+GGG | + | chr1_3:10286976-10286995 | Msa0103180:intron | 15.0% |
| !!! | TTCTTTTAAAGTTTTTAAAC+GGG | + | chr1_3:10287305-10287324 | Msa0103180:intron | 15.0% |
| !! | ATAATATGTATTCTTACATT+AGG | - | chr1_3:10288287-10288306 | None:intergenic | 15.0% |
| !!! | TATTATTGATTTTATGATGT+TGG | + | chr1_3:10288301-10288320 | Msa0103180:intron | 15.0% |
| !!! | TGATAGTACTTATATTTTAA+AGG | + | chr1_3:10288494-10288513 | Msa0103180:intron | 15.0% |
| !!! | GATAGTACTTATATTTTAAA+GGG | + | chr1_3:10288495-10288514 | Msa0103180:intron | 15.0% |
| !!! | AAGAATCTTTTCTTATATAT+AGG | - | chr1_3:10288872-10288891 | None:intergenic | 15.0% |
| !!! | AAGAATCTTTTCTTATATAT+AGG | + | chr1_3:10288872-10288891 | Msa0103180:intron | 15.0% |
| !! | ATTCTATGATATAAAGAAAA+AGG | - | chr1_3:10289192-10289211 | None:intergenic | 15.0% |
| !! | TTATATCATAGAATAGATTT+AGG | + | chr1_3:10289198-10289217 | Msa0103180:intron | 15.0% |
| !! | TATATCATAGAATAGATTTA+GGG | + | chr1_3:10289199-10289218 | Msa0103180:intron | 15.0% |
| !! | ATCTGATTAAAAAAGTTTAT+CGG | + | chr1_3:10289911-10289930 | Msa0103180:intron | 15.0% |
| !!! | TCCTAATTTAATAATTTTGT+TGG | + | chr1_3:10289979-10289998 | Msa0103180:intron | 15.0% |
| !!! | CCTAATTTAATAATTTTGTT+GGG | + | chr1_3:10289980-10289999 | Msa0103180:intron | 15.0% |
| !! | GTTATAAACTTATAATTGTA+GGG | + | chr1_3:10290460-10290479 | Msa0103180:intron | 15.0% |
| !! | TAAAATAAATTTGGAGAATA+TGG | + | chr1_3:10290676-10290695 | Msa0103180:intron | 15.0% |
| !! | CAAAAATAAAAACCAAATAT+GGG | - | chr1_3:10290975-10290994 | None:intergenic | 15.0% |
| !! | TATTTGAAAATAGAGTTAAA+TGG | + | chr1_3:10291052-10291071 | Msa0103180:intron | 15.0% |
| !! | ATTCACAAATATCTATATTA+TGG | - | chr1_3:10291127-10291146 | None:intergenic | 15.0% |
| !!! | ATTTTCAAGATTATAATGAT+TGG | - | chr1_3:10291218-10291237 | None:intergenic | 15.0% |
| !! | CAGAAATAACATTTATATAT+TGG | - | chr1_3:10291305-10291324 | None:intergenic | 15.0% |
| !! | ATAGTAAGTTGTTGAATATT+AGG | - | chr1_3:10285556-10285575 | None:intergenic | 20.0% |
| !! | AATAAAATTTGATAGAGTCA+AGG | + | chr1_3:10285642-10285661 | Msa0103180:intron | 20.0% |
| !! | TTATGAATATTCATAAAGTC+AGG | + | chr1_3:10285670-10285689 | Msa0103180:intron | 20.0% |
| !! | TATGAATATTCATAAAGTCA+GGG | + | chr1_3:10285671-10285690 | Msa0103180:intron | 20.0% |
| !! | TAATGCATAATAAAAACAAG+GGG | + | chr1_3:10286977-10286996 | Msa0103180:intron | 20.0% |
| !! | AGATTTAGAAAAAAGAGAAA+GGG | - | chr1_3:10288105-10288124 | None:intergenic | 20.0% |
| !!! | GATTGGTTAAAATAAATTTC+AGG | - | chr1_3:10288591-10288610 | None:intergenic | 20.0% |
| !! | ATATCATAGAATAGATTTAG+GGG | + | chr1_3:10289200-10289219 | Msa0103180:intron | 20.0% |
| !! | ATTATCATATAAAACACAAG+AGG | - | chr1_3:10289741-10289760 | None:intergenic | 20.0% |
| !! | CCCAACAAAATTATTAAATT+AGG | - | chr1_3:10289983-10290002 | None:intergenic | 20.0% |
| !! | TTCAATATTCTGTTTACAAT+AGG | - | chr1_3:10290011-10290030 | None:intergenic | 20.0% |
| !! | GGTTATAAACTTATAATTGT+AGG | + | chr1_3:10290459-10290478 | Msa0103180:intron | 20.0% |
| !! | TTATTGAGTGAAATCAATAT+GGG | - | chr1_3:10290573-10290592 | None:intergenic | 20.0% |
| !! | AATAGCTTATTTGATAAGTT+TGG | - | chr1_3:10290847-10290866 | None:intergenic | 20.0% |
| !! | CCAAAAATAAAAACCAAATA+TGG | - | chr1_3:10290976-10290995 | None:intergenic | 20.0% |
| !!! | CCATATTTGGTTTTTATTTT+TGG | + | chr1_3:10290973-10290992 | Msa0103180:intron | 20.0% |
| !! | TCATCATCATATATTTGATT+TGG | + | chr1_3:10291011-10291030 | Msa0103180:intron | 20.0% |
| !!! | CTCTATTTTCAAATATAAGA+TGG | - | chr1_3:10291047-10291066 | None:intergenic | 20.0% |
| !! | AATTATCAAAATTGTGACTA+AGG | - | chr1_3:10291338-10291357 | None:intergenic | 20.0% |
| !! | GAGAAAAAATACAATGATAT+TGG | - | chr1_3:10291905-10291924 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAACATTTACACT+TGG | + | chr1_3:10291934-10291953 | Msa0103180:intron | 20.0% |
| !!! | ATAGTTCTATTTTGTAGAAA+TGG | + | chr1_3:10291966-10291985 | Msa0103180:intron | 20.0% |
| !!! | TGAATTTTTTTGGGGATAAA+GGG | - | chr1_3:10284862-10284881 | None:intergenic | 25.0% |
| !!! | TTGAATTTTTTTGGGGATAA+AGG | - | chr1_3:10284863-10284882 | None:intergenic | 25.0% |
| ! | AGGTAATTTCATTATTGGAT+TGG | + | chr1_3:10285278-10285297 | Msa0103180:intron | 25.0% |
| ! | GGTAATTTCATTATTGGATT+GGG | + | chr1_3:10285279-10285298 | Msa0103180:intron | 25.0% |
| ! | GGTTTAAATTTACATGCATA+TGG | + | chr1_3:10285300-10285319 | Msa0103180:intron | 25.0% |
| ! | TTTGTTGAACATCCTTAAAT+AGG | + | chr1_3:10285471-10285490 | Msa0103180:intron | 25.0% |
| ! | AGATTATGAGTATTTCAGAA+AGG | + | chr1_3:10285500-10285519 | Msa0103180:intron | 25.0% |
| ! | ATAGTAAGTGGATAAACTTA+AGG | - | chr1_3:10285583-10285602 | None:intergenic | 25.0% |
| ! | TACAAAGTTAGAGACTAATT+TGG | + | chr1_3:10285712-10285731 | Msa0103180:intron | 25.0% |
| !! | CTATATTGTTGTATGCATTT+TGG | + | chr1_3:10285744-10285763 | Msa0103180:intron | 25.0% |
| !! | ATGATACGCTTTTGTATTTA+TGG | + | chr1_3:10285801-10285820 | Msa0103180:intron | 25.0% |
| ! | TTGTATTTATGGTACAGAAA+AGG | + | chr1_3:10285812-10285831 | Msa0103180:intron | 25.0% |
| ! | TGAAATTCTTGAGCAAAAAA+TGG | + | chr1_3:10286376-10286395 | Msa0103180:CDS | 25.0% |
| ! | TTACATGATTAATAATCCCA+GGG | - | chr1_3:10286475-10286494 | None:intergenic | 25.0% |
| ! | TCATGTAAGAAATAGAAAAC+AGG | + | chr1_3:10286487-10286506 | Msa0103180:CDS | 25.0% |
| ! | CAAGAGATTCAATAATTGTT+TGG | - | chr1_3:10286514-10286533 | None:intergenic | 25.0% |
| ! | TAACTGAAAAACACGAAAAT+AGG | + | chr1_3:10286534-10286553 | Msa0103180:CDS | 25.0% |
| ! | AGAATCATCAAATGTTACAA+CGG | + | chr1_3:10286877-10286896 | Msa0103180:CDS | 25.0% |
| ! | GGAAAATTAATCTTCACATT+AGG | + | chr1_3:10287037-10287056 | Msa0103180:intron | 25.0% |
| ! | TAGTATAGATGTCATCTAAT+GGG | + | chr1_3:10287061-10287080 | Msa0103180:intron | 25.0% |
| ! | GTACCATAAAAAGTTGTTTA+GGG | + | chr1_3:10287083-10287102 | Msa0103180:intron | 25.0% |
| !! | ATACCCTAAACAACTTTTTA+TGG | - | chr1_3:10287089-10287108 | None:intergenic | 25.0% |
| ! | ATAATGAAAATGCTTACATG+TGG | + | chr1_3:10287334-10287353 | Msa0103180:intron | 25.0% |
| !! | AAAACACAACTATTTTGTCA+TGG | + | chr1_3:10287611-10287630 | Msa0103180:intron | 25.0% |
| ! | CCTTGATAAAACTTCAAAAA+CGG | - | chr1_3:10287713-10287732 | None:intergenic | 25.0% |
| !! | ATTTCCTCAAACTTTTGTAA+GGG | - | chr1_3:10287775-10287794 | None:intergenic | 25.0% |
| !! | TATTTCCTCAAACTTTTGTA+AGG | - | chr1_3:10287776-10287795 | None:intergenic | 25.0% |
| ! | CAGATTTAGAAAAAAGAGAA+AGG | - | chr1_3:10288106-10288125 | None:intergenic | 25.0% |
| !!! | CTTTCTCTTTTTTCTAAATC+TGG | + | chr1_3:10288104-10288123 | Msa0103180:intron | 25.0% |
| ! | CTTGTATTGTTCATAATTTC+AGG | + | chr1_3:10288128-10288147 | Msa0103180:intron | 25.0% |
| ! | AAAGCTGTTTAATTCTTAGA+TGG | + | chr1_3:10288438-10288457 | Msa0103180:intron | 25.0% |
| ! | TTAAAGGGATAAGAAGAAAA+TGG | + | chr1_3:10288510-10288529 | Msa0103180:intron | 25.0% |
| ! | TAAAGGGATAAGAAGAAAAT+GGG | + | chr1_3:10288511-10288530 | Msa0103180:intron | 25.0% |
| !! | ATTTTCATCACTTAATGTGA+CGG | - | chr1_3:10288649-10288668 | None:intergenic | 25.0% |
| ! | GATGAAAATATGTATCCTTT+AGG | + | chr1_3:10288660-10288679 | Msa0103180:intron | 25.0% |
| !! | TCTTTTCTTATATATAGGAC+CGG | - | chr1_3:10288877-10288896 | None:intergenic | 25.0% |
| !! | TCTTTTCTTATATATAGGAC+CGG | + | chr1_3:10288877-10288896 | Msa0103180:intron | 25.0% |
| ! | TATCATAGAATAGATTTAGG+GGG | + | chr1_3:10289201-10289220 | Msa0103180:intron | 25.0% |
| ! | ATTAGAGATTCATGATATCA+AGG | + | chr1_3:10289236-10289255 | Msa0103180:intron | 25.0% |
| ! | TAAGGTTTCTCAACAATTAA+TGG | + | chr1_3:10289293-10289312 | Msa0103180:intron | 25.0% |
| ! | TGTAATCCATATAGTTTAAG+TGG | + | chr1_3:10289694-10289713 | Msa0103180:intron | 25.0% |
| ! | GTAATCCATATAGTTTAAGT+GGG | + | chr1_3:10289695-10289714 | Msa0103180:intron | 25.0% |
| ! | TAATCCATATAGTTTAAGTG+GGG | + | chr1_3:10289696-10289715 | Msa0103180:intron | 25.0% |
| !!! | AGTAAATGGTATGTTGATTT+CGG | + | chr1_3:10289843-10289862 | Msa0103180:intron | 25.0% |
| !!! | TTTTTTTGATAGGCAAATGT+TGG | + | chr1_3:10290043-10290062 | Msa0103180:intron | 25.0% |
| !!! | TTTTTTCTCTGTTATTGTGT+TGG | + | chr1_3:10290437-10290456 | Msa0103180:intron | 25.0% |
| !! | TTTTTCTCTGTTATTGTGTT+GGG | + | chr1_3:10290438-10290457 | Msa0103180:intron | 25.0% |
| ! | CTTATTGAGTGAAATCAATA+TGG | - | chr1_3:10290574-10290593 | None:intergenic | 25.0% |
| !! | ATTGATTTCACTCAATAAGA+AGG | + | chr1_3:10290575-10290594 | Msa0103180:intron | 25.0% |
| ! | ATTGAATAAAATCCTACAAG+AGG | - | chr1_3:10290641-10290660 | None:intergenic | 25.0% |
| ! | GAATGACTCAAATTAATCAA+AGG | - | chr1_3:10290925-10290944 | None:intergenic | 25.0% |
| !!! | ATTTTTGGCAAATAACTTGA+TGG | + | chr1_3:10290988-10291007 | Msa0103180:intron | 25.0% |
| ! | ACTAACATGCAAATTCAATA+TGG | + | chr1_3:10291165-10291184 | Msa0103180:intron | 25.0% |
| ! | AAAATTGCATGTTGAGTATA+TGG | - | chr1_3:10291429-10291448 | None:intergenic | 25.0% |
| !!! | TAATTTTTTCTGCATGTCAA+TGG | - | chr1_3:10291730-10291749 | None:intergenic | 25.0% |
| !!! | ATTGTATTTTTTCTCATGAG+TGG | + | chr1_3:10291910-10291929 | Msa0103180:intron | 25.0% |
| ! | ACAAAATAGAACTATCTAAG+AGG | - | chr1_3:10291961-10291980 | None:intergenic | 25.0% |
| TCTCGTGACAAAACAATAAA+AGG | + | chr1_3:10284807-10284826 | Msa0103180:five_prime_UTR | 30.0% | |
| CTCGTGACAAAACAATAAAA+GGG | + | chr1_3:10284808-10284827 | Msa0103180:five_prime_UTR | 30.0% | |
| !!! | GGGTTTGGATTTTGAAATTA+GGG | - | chr1_3:10284977-10284996 | None:intergenic | 30.0% |
| !!! | AGGGTTTGGATTTTGAAATT+AGG | - | chr1_3:10284978-10284997 | None:intergenic | 30.0% |
| GAAAGAGAAGAAAGAGAAAA+GGG | - | chr1_3:10284997-10285016 | None:intergenic | 30.0% | |
| ATCCATACACGATTGAAATT+GGG | - | chr1_3:10285020-10285039 | None:intergenic | 30.0% | |
| !! | ATTTTGACACGTTTTCTAAG+GGG | - | chr1_3:10285231-10285250 | None:intergenic | 30.0% |
| !! | CATTTTGACACGTTTTCTAA+GGG | - | chr1_3:10285232-10285251 | None:intergenic | 30.0% |
| !! | TCATTTTGACACGTTTTCTA+AGG | - | chr1_3:10285233-10285252 | None:intergenic | 30.0% |
| AATGAAAGATCTTGAATCTG+TGG | + | chr1_3:10285248-10285267 | Msa0103180:CDS | 30.0% | |
| TAATCTCAAGGACCTATTTA+AGG | - | chr1_3:10285486-10285505 | None:intergenic | 30.0% | |
| CTGAAATACTCATAATCTCA+AGG | - | chr1_3:10285498-10285517 | None:intergenic | 30.0% | |
| GAATATTAGGACCAATTTGT+CGG | - | chr1_3:10285543-10285562 | None:intergenic | 30.0% | |
| ! | AGGACTAAATTGATAGTAAG+TGG | - | chr1_3:10285595-10285614 | None:intergenic | 30.0% |
| GTCCTTATTGTATTCTTTGA+TGG | + | chr1_3:10285610-10285629 | Msa0103180:intron | 30.0% | |
| GTCCATCAAAGAATACAATA+AGG | - | chr1_3:10285615-10285634 | None:intergenic | 30.0% | |
| AAAGTTAGAGACTAATTTGG+TGG | + | chr1_3:10285715-10285734 | Msa0103180:intron | 30.0% | |
| AACATTGTTCAATCGTCATT+TGG | + | chr1_3:10285849-10285868 | Msa0103180:CDS | 30.0% | |
| TGTTCTTTGTGAAAACTTGT+TGG | - | chr1_3:10286185-10286204 | None:intergenic | 30.0% | |
| ! | ACAAGTTTTCACAAAGAACA+TGG | + | chr1_3:10286185-10286204 | Msa0103180:CDS | 30.0% |
| !! | ACATGGTCATTTTAAGTCAA+AGG | + | chr1_3:10286202-10286221 | Msa0103180:CDS | 30.0% |
| ATTTCAACTTCAACTGTTCA+TGG | + | chr1_3:10286311-10286330 | Msa0103180:CDS | 30.0% | |
| TACTGAATGATTTAAACCCT+GGG | + | chr1_3:10286456-10286475 | Msa0103180:CDS | 30.0% | |
| CTTACATGATTAATAATCCC+AGG | - | chr1_3:10286476-10286495 | None:intergenic | 30.0% | |
| GCTTGTTCATGATAAAAAGT+AGG | - | chr1_3:10286656-10286675 | None:intergenic | 30.0% | |
| ACATACAATGTAGAAAAAGC+TGG | + | chr1_3:10286743-10286762 | Msa0103180:CDS | 30.0% | |
| CATTTGATGCACAATCTTTA+AGG | - | chr1_3:10286769-10286788 | None:intergenic | 30.0% | |
| GAAATTGTCATCTTCAATGA+AGG | + | chr1_3:10286823-10286842 | Msa0103180:CDS | 30.0% | |
| TGATTCTTCATTCGACATAT+TGG | - | chr1_3:10286864-10286883 | None:intergenic | 30.0% | |
| GTTTCATCTCTTTCTCTAAA+AGG | + | chr1_3:10286899-10286918 | Msa0103180:CDS | 30.0% | |
| AAACATAAGCAGAAGGAAAA+TGG | - | chr1_3:10286932-10286951 | None:intergenic | 30.0% | |
| CTAGTATAGATGTCATCTAA+TGG | + | chr1_3:10287060-10287079 | Msa0103180:intron | 30.0% | |
| GGTACCATAAAAAGTTGTTT+AGG | + | chr1_3:10287082-10287101 | Msa0103180:intron | 30.0% | |
| ! | TGATTTTACAAGCTGAAACA+TGG | - | chr1_3:10287112-10287131 | None:intergenic | 30.0% |
| !! | AGAAGTATTCGTATCAGTAA+AGG | - | chr1_3:10287197-10287216 | None:intergenic | 30.0% |
| TTCTACATCAAGACATCAAA+GGG | + | chr1_3:10287256-10287275 | Msa0103180:CDS | 30.0% | |
| !!! | AACTCTGCTATTTTACTAGT+CGG | - | chr1_3:10287512-10287531 | None:intergenic | 30.0% |
| !!! | GCTTATTTTAGGTTTCCTTT+AGG | + | chr1_3:10287641-10287660 | Msa0103180:intron | 30.0% |
| !!! | CCGTTTTTGAAGTTTTATCA+AGG | + | chr1_3:10287710-10287729 | Msa0103180:intron | 30.0% |
| ! | TCAAACTTTTGTAAGGGAAA+TGG | - | chr1_3:10287769-10287788 | None:intergenic | 30.0% |
| ATTTCCCTTACAAAAGTTTG+AGG | + | chr1_3:10287768-10287787 | Msa0103180:intron | 30.0% | |
| ACTATTTCCTCTCTTTGATA+AGG | + | chr1_3:10287971-10287990 | Msa0103180:intron | 30.0% | |
| CTATTTCCTCTCTTTGATAA+GGG | + | chr1_3:10287972-10287991 | Msa0103180:intron | 30.0% | |
| GTTCATAATTTCAGGAAAGT+TGG | + | chr1_3:10288136-10288155 | Msa0103180:intron | 30.0% | |
| TAGGCAAGTAAAAATTTACC+TGG | - | chr1_3:10288268-10288287 | None:intergenic | 30.0% | |
| AAGTGATAGAGCAATATTGA+AGG | + | chr1_3:10288698-10288717 | Msa0103180:intron | 30.0% | |
| AGTGATAGAGCAATATTGAA+GGG | + | chr1_3:10288699-10288718 | Msa0103180:intron | 30.0% | |
| AAGACTGAAGACTAATGATA+GGG | + | chr1_3:10288909-10288928 | Msa0103180:intron | 30.0% | |
| ! | TTGAAAGCCTTGTAAATGAA+AGG | + | chr1_3:10288953-10288972 | Msa0103180:intron | 30.0% |
| TTTCCACCAAATAAAAAGCT+AGG | - | chr1_3:10289345-10289364 | None:intergenic | 30.0% | |
| CAAGACAAAGGTAAAAAGTT+AGG | - | chr1_3:10289372-10289391 | None:intergenic | 30.0% | |
| ! | TAAGAAGTACATCAAGACAA+AGG | - | chr1_3:10289384-10289403 | None:intergenic | 30.0% |
| TTGTCTTGATGTACTTCTTA+TGG | + | chr1_3:10289384-10289403 | Msa0103180:intron | 30.0% | |
| !!! | CTGCAATGCATGTATTTTTT+AGG | + | chr1_3:10289427-10289446 | Msa0103180:intron | 30.0% |
| TGTACATATTGAGTCAATAG+AGG | + | chr1_3:10289462-10289481 | Msa0103180:intron | 30.0% | |
| TAGAAGTAAGACGATTCATA+TGG | + | chr1_3:10289546-10289565 | Msa0103180:intron | 30.0% | |
| AGAAGTAAGACGATTCATAT+GGG | + | chr1_3:10289547-10289566 | Msa0103180:intron | 30.0% | |
| ATTAAAAGTAGAAGCAGTAC+TGG | + | chr1_3:10289579-10289598 | Msa0103180:intron | 30.0% | |
| ! | ACTGGATTAGATGTGAAAAT+TGG | + | chr1_3:10289597-10289616 | Msa0103180:intron | 30.0% |
| GAGTTAATTGTCCAAATTGA+TGG | + | chr1_3:10289656-10289675 | Msa0103180:intron | 30.0% | |
| ! | TCTCTATTTCTCCATCAATT+TGG | - | chr1_3:10289670-10289689 | None:intergenic | 30.0% |
| TATTGTACAACAATAACACG+AGG | + | chr1_3:10289789-10289808 | Msa0103180:intron | 30.0% | |
| !! | ATGTCCAATTTCTGGTTAAA+TGG | + | chr1_3:10289943-10289962 | Msa0103180:intron | 30.0% |
| ACAACCATTTAACCAGAAAT+TGG | - | chr1_3:10289950-10289969 | None:intergenic | 30.0% | |
| ! | TTCTGGTTAAATGGTTGTAT+CGG | + | chr1_3:10289952-10289971 | Msa0103180:intron | 30.0% |
| !! | TTGGTGATTAGTTTGTAATG+AGG | + | chr1_3:10290062-10290081 | Msa0103180:intron | 30.0% |
| !! | TGATTAGTTTGTAATGAGGA+AGG | + | chr1_3:10290066-10290085 | Msa0103180:intron | 30.0% |
| !! | GATTAGTTTGTAATGAGGAA+GGG | + | chr1_3:10290067-10290086 | Msa0103180:intron | 30.0% |
| !! | ATTAGTTTGTAATGAGGAAG+GGG | + | chr1_3:10290068-10290087 | Msa0103180:intron | 30.0% |
| TTAGTAGCATAGATCTACAT+TGG | + | chr1_3:10290097-10290116 | Msa0103180:intron | 30.0% | |
| GATCAATAGATTCTCTATCA+AGG | + | chr1_3:10290186-10290205 | Msa0103180:intron | 30.0% | |
| ! | ATCAAGGAGAGCATATTAAA+TGG | + | chr1_3:10290202-10290221 | Msa0103180:intron | 30.0% |
| TAGGAAGGCGAAAATTATAT+AGG | + | chr1_3:10290249-10290268 | Msa0103180:intron | 30.0% | |
| AGGAAGGCGAAAATTATATA+GGG | + | chr1_3:10290250-10290269 | Msa0103180:intron | 30.0% | |
| ! | TGGACTAGATTATTTGCAAT+CGG | + | chr1_3:10290402-10290421 | Msa0103180:intron | 30.0% |
| CTTACTTTGTTACCCATATT+TGG | + | chr1_3:10290960-10290979 | Msa0103180:intron | 30.0% | |
| TGTGATTAGACATATGAGTA+AGG | - | chr1_3:10291102-10291121 | None:intergenic | 30.0% | |
| ! | TTCAATATGGTGAAGTATCA+TGG | + | chr1_3:10291178-10291197 | Msa0103180:intron | 30.0% |
| ! | TCAATATGGTGAAGTATCAT+GGG | + | chr1_3:10291179-10291198 | Msa0103180:intron | 30.0% |
| ATCATCTCAAATAGACATCT+CGG | + | chr1_3:10291370-10291389 | Msa0103180:CDS | 30.0% | |
| TACACAATCTTGTCTATTGA+TGG | + | chr1_3:10291486-10291505 | Msa0103180:intron | 30.0% | |
| AATAGTGACTATAGCACTAT+AGG | - | chr1_3:10291547-10291566 | None:intergenic | 30.0% | |
| ATATGTTCACCAGATTATGT+TGG | + | chr1_3:10291673-10291692 | Msa0103180:intron | 30.0% | |
| GCAGAAAAAATTAGTGAAGT+TGG | + | chr1_3:10291737-10291756 | Msa0103180:intron | 30.0% | |
| TTGTAGAAATGGAGAAAACA+TGG | + | chr1_3:10291977-10291996 | Msa0103180:CDS | 30.0% | |
| AGAAGAAAGAGAAAAGGGTT+TGG | - | chr1_3:10284992-10285011 | None:intergenic | 35.0% | |
| GGAAAGAGAAGAAAGAGAAA+AGG | - | chr1_3:10284998-10285017 | None:intergenic | 35.0% | |
| TCCATACACGATTGAAATTG+GGG | - | chr1_3:10285019-10285038 | None:intergenic | 35.0% | |
| CATCCATACACGATTGAAAT+TGG | - | chr1_3:10285021-10285040 | None:intergenic | 35.0% | |
| GCTGCAGGTAATTTCATTAT+TGG | + | chr1_3:10285273-10285292 | Msa0103180:intron | 35.0% | |
| ACTCTCTTAAACCGACAAAT+TGG | + | chr1_3:10285529-10285548 | Msa0103180:intron | 35.0% | |
| TATGGTACAGAAAAGGCAAT+TGG | + | chr1_3:10285819-10285838 | Msa0103180:intron | 35.0% | |
| ATGGTACAGAAAAGGCAATT+GGG | + | chr1_3:10285820-10285839 | Msa0103180:intron | 35.0% | |
| GTTTCAAAAGAAGAGCAAGA+TGG | + | chr1_3:10285924-10285943 | Msa0103180:CDS | 35.0% | |
| GATCTTAACACTGAAGTTTG+TGG | + | chr1_3:10285978-10285997 | Msa0103180:CDS | 35.0% | |
| CAGATATCCTTCATTGTATC+CGG | + | chr1_3:10286004-10286023 | Msa0103180:CDS | 35.0% | |
| ! | CTTTTATCCGGATACAATGA+AGG | - | chr1_3:10286014-10286033 | None:intergenic | 35.0% |
| ! | ATTTGGTGAGAAACTCAGTA+AGG | + | chr1_3:10286040-10286059 | Msa0103180:CDS | 35.0% |
| TAAGGAGAAGGAATTGTTGT+CGG | + | chr1_3:10286058-10286077 | Msa0103180:CDS | 35.0% | |
| AGAGAGATCCAATGAGAATA+TGG | + | chr1_3:10286264-10286283 | Msa0103180:CDS | 35.0% | |
| ATCTCTGTCCATATTCTCAT+TGG | - | chr1_3:10286275-10286294 | None:intergenic | 35.0% | |
| CAAAGAGAGAACAAATCAAC+AGG | + | chr1_3:10286405-10286424 | Msa0103180:CDS | 35.0% | |
| AAATCATTCAGTAGTCCACT+TGG | - | chr1_3:10286449-10286468 | None:intergenic | 35.0% | |
| CTACTGAATGATTTAAACCC+TGG | + | chr1_3:10286455-10286474 | Msa0103180:CDS | 35.0% | |
| ! | AAACACGAAAATAGGAGCAT+AGG | + | chr1_3:10286542-10286561 | Msa0103180:CDS | 35.0% |
| ! | AAAATAGGAGCATAGGAAGT+AGG | + | chr1_3:10286549-10286568 | Msa0103180:CDS | 35.0% |
| AAGTATAGGCGTTAACAAGA+GGG | + | chr1_3:10286595-10286614 | Msa0103180:CDS | 35.0% | |
| TTCTTCATTCGACATATTGG+TGG | - | chr1_3:10286861-10286880 | None:intergenic | 35.0% | |
| AGACAAGAAACATAAGCAGA+AGG | - | chr1_3:10286939-10286958 | None:intergenic | 35.0% | |
| GCATAATAAAAACAAGGGGT+TGG | + | chr1_3:10286981-10287000 | Msa0103180:intron | 35.0% | |
| CTTCTACATCAAGACATCAA+AGG | + | chr1_3:10287255-10287274 | Msa0103180:CDS | 35.0% | |
| AATTCCTTCGACATAAGGAA+AGG | - | chr1_3:10287437-10287456 | None:intergenic | 35.0% | |
| TTCCTTATGTCGAAGGAATT+TGG | + | chr1_3:10287437-10287456 | Msa0103180:CDS | 35.0% | |
| TACCACAAGGATCATAATTC+TGG | - | chr1_3:10287469-10287488 | None:intergenic | 35.0% | |
| TCAGGAAATTTCATACCACA+AGG | - | chr1_3:10287482-10287501 | None:intergenic | 35.0% | |
| TTGTGGTATGAAATTTCCTG+AGG | + | chr1_3:10287481-10287500 | Msa0103180:CDS | 35.0% | |
| TGTGGTATGAAATTTCCTGA+GGG | + | chr1_3:10287482-10287501 | Msa0103180:CDS | 35.0% | |
| TAAAATAGCAGAGTTGCATC+AGG | + | chr1_3:10287517-10287536 | Msa0103180:CDS | 35.0% | |
| !! | ACTATTTTGTCATGGTCTTG+AGG | + | chr1_3:10287619-10287638 | Msa0103180:intron | 35.0% |
| !! | ATGGTCTTGAGGCTTATTTT+AGG | + | chr1_3:10287630-10287649 | Msa0103180:intron | 35.0% |
| TGATGCTGAAACTATTTCCA+TGG | - | chr1_3:10287677-10287696 | None:intergenic | 35.0% | |
| AGTTGAATGCATGTCTTCAT+AGG | + | chr1_3:10287867-10287886 | Msa0103180:intron | 35.0% | |
| AAACAAGTTTGAACATGCCA+AGG | + | chr1_3:10287906-10287925 | Msa0103180:intron | 35.0% | |
| AGCAATGCATATATGTACCT+TGG | - | chr1_3:10287926-10287945 | None:intergenic | 35.0% | |
| CTAGGTATTCAATTTCACCA+TGG | - | chr1_3:10288014-10288033 | None:intergenic | 35.0% | |
| CATGGTGAAATTGAATACCT+AGG | + | chr1_3:10288012-10288031 | Msa0103180:intron | 35.0% | |
| !! | TAGGAAAGTACCAAGTTACT+CGG | + | chr1_3:10288031-10288050 | Msa0103180:intron | 35.0% |
| ACAATTACCATGAACGTAGT+TGG | + | chr1_3:10288077-10288096 | Msa0103180:intron | 35.0% | |
| AAAGCAATTGCTATGTGATC+AGG | + | chr1_3:10288176-10288195 | Msa0103180:CDS | 35.0% | |
| AAGCAATTGCTATGTGATCA+GGG | + | chr1_3:10288177-10288196 | Msa0103180:CDS | 35.0% | |
| CAACATATAAACTGGAGCAA+GGG | + | chr1_3:10288204-10288223 | Msa0103180:CDS | 35.0% | |
| !!! | TTTTCTGAAGTTGCAAACTG+TGG | - | chr1_3:10288240-10288259 | None:intergenic | 35.0% |
| ! | TTTTATGATGTTGGCACTGT+TGG | + | chr1_3:10288310-10288329 | Msa0103180:intron | 35.0% |
| TTTATGATGTTGGCACTGTT+GGG | + | chr1_3:10288311-10288330 | Msa0103180:intron | 35.0% | |
| AGTACTTAGCAGGTCTTAAA+TGG | + | chr1_3:10288534-10288553 | Msa0103180:intron | 35.0% | |
| ACCAATCAATCCAATGTTAG+AGG | + | chr1_3:10288604-10288623 | Msa0103180:intron | 35.0% | |
| CCAATCAATCCAATGTTAGA+GGG | + | chr1_3:10288605-10288624 | Msa0103180:intron | 35.0% | |
| !! | CTCTAAAATCCCTCTAACAT+TGG | - | chr1_3:10288617-10288636 | None:intergenic | 35.0% |
| TTCTTATATATAGGACCGGA+GGG | - | chr1_3:10288881-10288900 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | - | chr1_3:10288880-10288899 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | + | chr1_3:10288880-10288899 | Msa0103180:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | + | chr1_3:10288881-10288900 | Msa0103180:intron | 35.0% | |
| GAAGACTGAAGACTAATGAT+AGG | + | chr1_3:10288908-10288927 | Msa0103180:intron | 35.0% | |
| CCAAACACCTTTCATTTACA+AGG | - | chr1_3:10288963-10288982 | None:intergenic | 35.0% | |
| !! | CCTTGTAAATGAAAGGTGTT+TGG | + | chr1_3:10288960-10288979 | Msa0103180:intron | 35.0% |
| ATATCAAGGATATGCACGAA+GGG | + | chr1_3:10289250-10289269 | Msa0103180:intron | 35.0% | |
| TGTTGAGAAACCTTATAGCT+CGG | - | chr1_3:10289288-10289307 | None:intergenic | 35.0% | |
| CAAATAAAAAGCTAGGAGCT+TGG | - | chr1_3:10289338-10289357 | None:intergenic | 35.0% | |
| !! | CAAGCTCCTAGCTTTTTATT+TGG | + | chr1_3:10289336-10289355 | Msa0103180:intron | 35.0% |
| CAATAGAGGAAATCAACAAG+AGG | + | chr1_3:10289476-10289495 | Msa0103180:intron | 35.0% | |
| TCAACAAGAGGATAGAGATT+TGG | + | chr1_3:10289488-10289507 | Msa0103180:intron | 35.0% | |
| ! | GAGATATTTTATCCAAGCTC+TGG | - | chr1_3:10289636-10289655 | None:intergenic | 35.0% |
| ATTGATGGAGAAATAGAGAG+AGG | + | chr1_3:10289671-10289690 | Msa0103180:intron | 35.0% | |
| TCAACATACCATTTACTCGA+CGG | - | chr1_3:10289840-10289859 | None:intergenic | 35.0% | |
| ! | GCTGCATTGGTATATTATGT+AGG | - | chr1_3:10290127-10290146 | None:intergenic | 35.0% |
| ! | AAGGAGAGCATATTAAATGG+AGG | + | chr1_3:10290205-10290224 | Msa0103180:intron | 35.0% |
| ! | AGGAGAGCATATTAAATGGA+GGG | + | chr1_3:10290206-10290225 | Msa0103180:intron | 35.0% |
| ! | AATCCAATTGTTAGAGGCAT+AGG | + | chr1_3:10290230-10290249 | Msa0103180:intron | 35.0% |
| AAATCGTTAAGAACGACTAG+AGG | + | chr1_3:10290274-10290293 | Msa0103180:intron | 35.0% | |
| TTGGCTATAGATATGAGTTG+TGG | + | chr1_3:10290305-10290324 | Msa0103180:intron | 35.0% | |
| TGGCTATAGATATGAGTTGT+GGG | + | chr1_3:10290306-10290325 | Msa0103180:intron | 35.0% | |
| GGACTAGATTATTTGCAATC+GGG | + | chr1_3:10290403-10290422 | Msa0103180:intron | 35.0% | |
| !!! | GGTTTTGAATCTCTTTGACA+AGG | - | chr1_3:10290886-10290905 | None:intergenic | 35.0% |
| ! | ATCTTGTCTATTGATGGTAG+CGG | + | chr1_3:10291492-10291511 | Msa0103180:intron | 35.0% |
| TTGTACTAGATAGCGTATTG+CGG | + | chr1_3:10291576-10291595 | Msa0103180:intron | 35.0% | |
| ATTACAGCACTATAGCATAG+CGG | - | chr1_3:10291621-10291640 | None:intergenic | 35.0% | |
| TGACTAGTGTCTAGAAATAG+CGG | - | chr1_3:10291654-10291673 | None:intergenic | 35.0% | |
| GAAAGACAACCAACATAATC+TGG | - | chr1_3:10291685-10291704 | None:intergenic | 35.0% | |
| TTGTCACGAGACAGATCTAT+AGG | - | chr1_3:10284798-10284817 | None:intergenic | 40.0% | |
| GGGATAAAGGGAAAAATCGT+GGG | - | chr1_3:10284850-10284869 | None:intergenic | 40.0% | |
| TGTGAGTGTGTTTAAGAGAG+TGG | - | chr1_3:10284925-10284944 | None:intergenic | 40.0% | |
| GGGTTTGTGTGAAGTGAAAA+TGG | - | chr1_3:10284957-10284976 | None:intergenic | 40.0% | |
| TCCCCAATTTCAATCGTGTA+TGG | + | chr1_3:10285015-10285034 | Msa0103180:exon | 40.0% | |
| !! | AACCTTTGAAGCAGATTGGA+CGG | - | chr1_3:10285077-10285096 | None:intergenic | 40.0% |
| !! | AACGAACCTTTGAAGCAGAT+TGG | - | chr1_3:10285081-10285100 | None:intergenic | 40.0% |
| TTTAGGTGATGAGTGAGAAG+AGG | + | chr1_3:10285175-10285194 | Msa0103180:intron | 40.0% | |
| TTAGGTGATGAGTGAGAAGA+GGG | + | chr1_3:10285176-10285195 | Msa0103180:intron | 40.0% | |
| AAGAGGGTTAATACCCACTT+GGG | + | chr1_3:10285192-10285211 | Msa0103180:CDS | 40.0% | |
| TTCATGCTTATCTCCCAAGT+GGG | - | chr1_3:10285208-10285227 | None:intergenic | 40.0% | |
| !! | TTTGTCGGTTTAAGAGAGTC+AGG | - | chr1_3:10285528-10285547 | None:intergenic | 40.0% |
| TGAGATGTCACAAATCACCA+AGG | + | chr1_3:10285878-10285897 | Msa0103180:CDS | 40.0% | |
| CAAAAGAAGAGCAAGATGGA+AGG | + | chr1_3:10285928-10285947 | Msa0103180:CDS | 40.0% | |
| GTGTTAAGATCCAAAACCCT+GGG | - | chr1_3:10285969-10285988 | None:intergenic | 40.0% | |
| AGTGTTAAGATCCAAAACCC+TGG | - | chr1_3:10285970-10285989 | None:intergenic | 40.0% | |
| CGGATACAATGAAGGATATC+TGG | - | chr1_3:10286006-10286025 | None:intergenic | 40.0% | |
| TTGTATCCGGATAAAAGCAG+TGG | + | chr1_3:10286017-10286036 | Msa0103180:CDS | 40.0% | |
| !! | CCAAATCCACTGCTTTTATC+CGG | - | chr1_3:10286026-10286045 | None:intergenic | 40.0% |
| TGAGAAACTCAGTAAGGAGA+AGG | + | chr1_3:10286046-10286065 | Msa0103180:CDS | 40.0% | |
| AAGCAGGAAAGAGAACAACT+TGG | + | chr1_3:10286083-10286102 | Msa0103180:CDS | 40.0% | |
| GAACACGAGAGGAATTAATG+TGG | + | chr1_3:10286118-10286137 | Msa0103180:CDS | 40.0% | |
| TGATACTAGATCCGTGAATG+TGG | + | chr1_3:10286157-10286176 | Msa0103180:CDS | 40.0% | |
| GATACTAGATCCGTGAATGT+GGG | + | chr1_3:10286158-10286177 | Msa0103180:CDS | 40.0% | |
| TCAAAGGATTTGTCTGAGAG+TGG | + | chr1_3:10286218-10286237 | Msa0103180:CDS | 40.0% | |
| CAAAGGATTTGTCTGAGAGT+GGG | + | chr1_3:10286219-10286238 | Msa0103180:CDS | 40.0% | |
| TCAACTTCAACTGTTCATGG+AGG | + | chr1_3:10286314-10286333 | Msa0103180:CDS | 40.0% | |
| ! | CATCGAATGAGTGGAAGTAT+AGG | + | chr1_3:10286581-10286600 | Msa0103180:CDS | 40.0% |
| GAAGTATAGGCGTTAACAAG+AGG | + | chr1_3:10286594-10286613 | Msa0103180:CDS | 40.0% | |
| TCGCATCTTTCACATGTTCT+AGG | - | chr1_3:10286622-10286641 | None:intergenic | 40.0% | |
| TTTACCCTCCAAAATCCATG+AGG | - | chr1_3:10286708-10286727 | None:intergenic | 40.0% | |
| !! | TCATGGATTTTGGAGGGTAA+AGG | + | chr1_3:10286707-10286726 | Msa0103180:CDS | 40.0% |
| GCTGCATTAGTTCATCACAA+CGG | - | chr1_3:10287017-10287036 | None:intergenic | 40.0% | |
| GTTGTGATGAACTAATGCAG+CGG | + | chr1_3:10287016-10287035 | Msa0103180:intron | 40.0% | |
| ! | TACTGTTGCTTCTCAATGGT+TGG | + | chr1_3:10287230-10287249 | Msa0103180:CDS | 40.0% |
| CTCCAAATTCCTTCGACATA+AGG | - | chr1_3:10287442-10287461 | None:intergenic | 40.0% | |
| GACCAGAATTATGATCCTTG+TGG | + | chr1_3:10287464-10287483 | Msa0103180:CDS | 40.0% | |
| GACTGCGTTGTTTGATCATA+TGG | + | chr1_3:10287547-10287566 | Msa0103180:CDS | 40.0% | |
| ! | GGATGAAGCACTTATTGAAG+AGG | + | chr1_3:10287568-10287587 | Msa0103180:CDS | 40.0% |
| CATGGCATAGATTGACCTAA+AGG | - | chr1_3:10287659-10287678 | None:intergenic | 40.0% | |
| CTTTAGGTCAATCTATGCCA+TGG | + | chr1_3:10287657-10287676 | Msa0103180:intron | 40.0% | |
| TTTCCTCTCTTTGATAAGGG+TGG | + | chr1_3:10287975-10287994 | Msa0103180:intron | 40.0% | |
| TATCCACCCTTATCAAAGAG+AGG | - | chr1_3:10287981-10288000 | None:intergenic | 40.0% | |
| TTGATAAGGGTGGATACTAG+AGG | + | chr1_3:10287985-10288004 | Msa0103180:intron | 40.0% | |
| GAGTAACTTGGTACTTTCCT+AGG | - | chr1_3:10288032-10288051 | None:intergenic | 40.0% | |
| CTGTAATAAGCCGAGTAACT+TGG | - | chr1_3:10288044-10288063 | None:intergenic | 40.0% | |
| GCAACATATAAACTGGAGCA+AGG | + | chr1_3:10288203-10288222 | Msa0103180:CDS | 40.0% | |
| ATAAACTGGAGCAAGGGTTA+TGG | + | chr1_3:10288210-10288229 | Msa0103180:CDS | 40.0% | |
| CAACTTCAGAAAATCACTCC+AGG | + | chr1_3:10288247-10288266 | Msa0103180:CDS | 40.0% | |
| !! | AGAAAATGGGAGTACTTAGC+AGG | + | chr1_3:10288524-10288543 | Msa0103180:intron | 40.0% |
| CCCTCTAACATTGGATTGAT+TGG | - | chr1_3:10288608-10288627 | None:intergenic | 40.0% | |
| GTCTAAGTTCACAGACCTAA+AGG | - | chr1_3:10288678-10288697 | None:intergenic | 40.0% | |
| !! | GTTGATTTTACTACTCCCTC+CGG | + | chr1_3:10288746-10288765 | Msa0103180:intron | 40.0% |
| GCTTTCAACAAAACCTCTCT+TGG | - | chr1_3:10288941-10288960 | None:intergenic | 40.0% | |
| TCACAGTAAAACCACATCAC+AGG | + | chr1_3:10289080-10289099 | Msa0103180:intron | 40.0% | |
| CACAGTAAAACCACATCACA+GGG | + | chr1_3:10289081-10289100 | Msa0103180:intron | 40.0% | |
| GATATCAAGGATATGCACGA+AGG | + | chr1_3:10289249-10289268 | Msa0103180:intron | 40.0% | |
| !! | GCTCCTAGCTTTTTATTTGG+TGG | + | chr1_3:10289339-10289358 | Msa0103180:intron | 40.0% |
| AGACGATTCATATGGGATGT+AGG | + | chr1_3:10289554-10289573 | Msa0103180:intron | 40.0% | |
| ! | ATCCAAGCTCTGGTATGATA+TGG | - | chr1_3:10289626-10289645 | None:intergenic | 40.0% |
| ATCGCCCCACTTAAACTATA+TGG | - | chr1_3:10289703-10289722 | None:intergenic | 40.0% | |
| TTTAAGTGGGGCGATTGAAA+TGG | + | chr1_3:10289708-10289727 | Msa0103180:intron | 40.0% | |
| ATAAACTCAGTGTAGCAGCT+TGG | + | chr1_3:10289812-10289831 | Msa0103180:intron | 40.0% | |
| ! | GTTGATTTCGGCTGCTTTAA+AGG | + | chr1_3:10289855-10289874 | Msa0103180:intron | 40.0% |
| TCTGACACATGTCCAATTTC+TGG | + | chr1_3:10289935-10289954 | Msa0103180:intron | 40.0% | |
| AAGTCAAGATTCAGCTGCAT+TGG | - | chr1_3:10290140-10290159 | None:intergenic | 40.0% | |
| TGCAGCTGAATCTTGACTTA+AGG | + | chr1_3:10290141-10290160 | Msa0103180:intron | 40.0% | |
| AGCTGAATCTTGACTTAAGG+TGG | + | chr1_3:10290144-10290163 | Msa0103180:intron | 40.0% | |
| GAGGGTAATCCAATTGTTAG+AGG | + | chr1_3:10290224-10290243 | Msa0103180:intron | 40.0% | |
| CTTCCTATGCCTCTAACAAT+TGG | - | chr1_3:10290236-10290255 | None:intergenic | 40.0% | |
| ! | CAATTGTTAGAGGCATAGGA+AGG | + | chr1_3:10290234-10290253 | Msa0103180:intron | 40.0% |
| ACGACTAGAGGTCAATGATT+TGG | + | chr1_3:10290286-10290305 | Msa0103180:intron | 40.0% | |
| TGAGTTGTGGGAGAACATTA+TGG | + | chr1_3:10290318-10290337 | Msa0103180:intron | 40.0% | |
| TTTCCAACACGCTCTCTTAT+TGG | + | chr1_3:10290507-10290526 | Msa0103180:intron | 40.0% | |
| TCAATATGGGTTCCACACTT+CGG | - | chr1_3:10290560-10290579 | None:intergenic | 40.0% | |
| ! | AAGGTGAGTGTTAAGAGTGT+CGG | + | chr1_3:10290594-10290613 | Msa0103180:intron | 40.0% |
| ! | AAAGGCATGTCTCTGATTCA+GGG | - | chr1_3:10290907-10290926 | None:intergenic | 40.0% |
| GTGAATGTCGACGATGATTT+AGG | + | chr1_3:10291141-10291160 | Msa0103180:intron | 40.0% | |
| GGGGATAAAGGGAAAAATCG+TGG | - | chr1_3:10284851-10284870 | None:intergenic | 45.0% | |
| GAAGAGGGTTAATACCCACT+TGG | + | chr1_3:10285191-10285210 | Msa0103180:CDS | 45.0% | |
| GTTCATGCTTATCTCCCAAG+TGG | - | chr1_3:10285209-10285228 | None:intergenic | 45.0% | |
| ! | CCGGATAAAAGCAGTGGATT+TGG | + | chr1_3:10286023-10286042 | Msa0103180:CDS | 45.0% |
| GGAATTGTTGTCGGAAAAGC+AGG | + | chr1_3:10286067-10286086 | Msa0103180:CDS | 45.0% | |
| CAGGAAAGAGAACAACTTGG+TGG | + | chr1_3:10286086-10286105 | Msa0103180:CDS | 45.0% | |
| ! | GAAAGAGAACAACTTGGTGG+TGG | + | chr1_3:10286089-10286108 | Msa0103180:CDS | 45.0% |
| ! | ACTTGTTGGTCCCACATTCA+CGG | - | chr1_3:10286171-10286190 | None:intergenic | 45.0% |
| ATTGGATCTCTCTCCTTTGG+AGG | - | chr1_3:10286257-10286276 | None:intergenic | 45.0% | |
| CTCATTGGATCTCTCTCCTT+TGG | - | chr1_3:10286260-10286279 | None:intergenic | 45.0% | |
| TGGACAGAGATGAAGCGAAA+TGG | + | chr1_3:10286284-10286303 | Msa0103180:CDS | 45.0% | |
| !! | AACTGTTCATGGAGGCATTC+CGG | + | chr1_3:10286322-10286341 | Msa0103180:CDS | 45.0% |
| ACAAAGATTGCAGCTCCAAG+TGG | + | chr1_3:10286431-10286450 | Msa0103180:CDS | 45.0% | |
| TGACAAAGAACGAGTCCTCA+TGG | + | chr1_3:10286690-10286709 | Msa0103180:CDS | 45.0% | |
| ! | GAACGAGTCCTCATGGATTT+TGG | + | chr1_3:10286697-10286716 | Msa0103180:CDS | 45.0% |
| ! | GAGTCCTCATGGATTTTGGA+GGG | + | chr1_3:10286701-10286720 | Msa0103180:CDS | 45.0% |
| ! | CTGCTACTGTTGCTTCTCAA+TGG | + | chr1_3:10287226-10287245 | Msa0103180:CDS | 45.0% |
| GTTGCCTTTCCTTATGTCGA+AGG | + | chr1_3:10287430-10287449 | Msa0103180:CDS | 45.0% | |
| AGGGCGTGCAACATATAAAC+TGG | + | chr1_3:10288196-10288215 | Msa0103180:CDS | 45.0% | |
| ! | AAGGTGTTTGGATTGCCTTG+CGG | + | chr1_3:10288972-10288991 | Msa0103180:intron | 45.0% |
| GGCAACTTAACCGAGCTATA+AGG | + | chr1_3:10289275-10289294 | Msa0103180:intron | 45.0% | |
| GACCATATCATACCAGAGCT+TGG | + | chr1_3:10289621-10289640 | Msa0103180:intron | 45.0% | |
| ! | GGTTAAATGGTTGTATCGGC+TGG | + | chr1_3:10289956-10289975 | Msa0103180:intron | 45.0% |
| CTTATCGCACTAGGTAGAGT+AGG | - | chr1_3:10290363-10290382 | None:intergenic | 45.0% | |
| CTACTCTACCTAGTGCGATA+AGG | + | chr1_3:10290361-10290380 | Msa0103180:intron | 45.0% | |
| TACCTAGTGCGATAAGGCAT+AGG | + | chr1_3:10290367-10290386 | Msa0103180:intron | 45.0% | |
| AACCTATGCCTTATCGCACT+AGG | - | chr1_3:10290372-10290391 | None:intergenic | 45.0% | |
| GGCATAGGTTGTTGACACAA+TGG | + | chr1_3:10290382-10290401 | Msa0103180:intron | 45.0% | |
| ! | CATCCAATAAGAGAGCGTGT+TGG | - | chr1_3:10290513-10290532 | None:intergenic | 45.0% |
| !! | AATCCTACAAGAGGAGTGCT+AGG | - | chr1_3:10290632-10290651 | None:intergenic | 45.0% |
| ! | CAAAGGCATGTCTCTGATTC+AGG | - | chr1_3:10290908-10290927 | None:intergenic | 45.0% |
| ATGGAGAAAACATGGAGTGC+AGG | + | chr1_3:10291985-10292004 | Msa0103180:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTGAT+AGG | + | chr1_3:10290033-10290052 | Msa0103180:intron | 5.0% |
| GACCGTCCAATCTGCTTCAA+AGG | + | chr1_3:10285072-10285091 | Msa0103180:CDS | 50.0% | |
| CTTGAATCTGTGGTTGCTGC+AGG | + | chr1_3:10285258-10285277 | Msa0103180:CDS | 50.0% | |
| ACATCCACGTCCACTGACAA+AGG | - | chr1_3:10285906-10285925 | None:intergenic | 50.0% | |
| ! | GCAAGATGGAAGGAGCACAT+CGG | + | chr1_3:10285938-10285957 | Msa0103180:CDS | 50.0% |
| ! | CAAGATGGAAGGAGCACATC+GGG | + | chr1_3:10285939-10285958 | Msa0103180:CDS | 50.0% |
| ! | ATTCCGGTGCCAAAGAAACG+CGG | + | chr1_3:10286338-10286357 | Msa0103180:CDS | 50.0% |
| ! | CTTTTCCTCCCGCGTTTCTT+TGG | - | chr1_3:10286350-10286369 | None:intergenic | 50.0% |
| CAAGCAGCACATCGAATGAG+TGG | + | chr1_3:10286572-10286591 | Msa0103180:CDS | 50.0% | |
| ! | CGAGTCCTCATGGATTTTGG+AGG | + | chr1_3:10286700-10286719 | Msa0103180:CDS | 50.0% |
| !! | AGACATCAAAGGGCGTCTTG+CGG | + | chr1_3:10287266-10287285 | Msa0103180:CDS | 50.0% |
| TTACAGCTTTGCGTCGCAGT+AGG | + | chr1_3:10287378-10287397 | Msa0103180:intron | 50.0% | |
| TTACTAGTCGGAAGTCCCTC+AGG | - | chr1_3:10287500-10287519 | None:intergenic | 50.0% | |
| CAGAGTTGCATCAGGCAAGA+TGG | + | chr1_3:10287525-10287544 | Msa0103180:CDS | 50.0% | |
| !! | GTGGATACTAGAGGTGTCCA+TGG | + | chr1_3:10287994-10288013 | Msa0103180:intron | 50.0% |
| !! | AAGGGCACCAACTACGTTCA+TGG | - | chr1_3:10288087-10288106 | None:intergenic | 50.0% |
| CTTCAGTCTTCTACTCCCTC+CGG | - | chr1_3:10288899-10288918 | None:intergenic | 50.0% | |
| ACGATGTGGCCGCAAAATTG+AGG | + | chr1_3:10289005-10289024 | Msa0103180:intron | 50.0% | |
| ! | CTGCGGCAACCTCAATTTTG+CGG | - | chr1_3:10289017-10289036 | None:intergenic | 50.0% |
| GCTCAATTGCAGACTGATGC+AGG | - | chr1_3:10289048-10289067 | None:intergenic | 50.0% | |
| !! | GCGCAATGTAGTGGACACAA+TGG | + | chr1_3:10289103-10289122 | Msa0103180:intron | 50.0% |
| TGGCTGCATCACACTACATC+AGG | + | chr1_3:10289123-10289142 | Msa0103180:intron | 50.0% | |
| CAAGGATATGCACGAAGGGA+TGG | + | chr1_3:10289254-10289273 | Msa0103180:intron | 50.0% | |
| AAGCTAGGAGCTTGGAGTTG+AGG | - | chr1_3:10289330-10289349 | None:intergenic | 50.0% | |
| GCTTGGAACCGTCGAGTAAA+TGG | + | chr1_3:10289829-10289848 | Msa0103180:intron | 50.0% | |
| TGCGACTCATTTCCGAAGTG+TGG | + | chr1_3:10290545-10290564 | Msa0103180:intron | 50.0% | |
| ! | CACCAAGGTGCCTTTGTCAG+TGG | + | chr1_3:10285893-10285912 | Msa0103180:CDS | 55.0% |
| !! | GTCCACTGACAAAGGCACCT+TGG | - | chr1_3:10285898-10285917 | None:intergenic | 55.0% |
| ! | ATCGGGTAGTCCCAGGGTTT+TGG | + | chr1_3:10285956-10285975 | Msa0103180:CDS | 55.0% |
| ! | GGTGGTGATGTGAACACGAG+AGG | + | chr1_3:10286107-10286126 | Msa0103180:CDS | 55.0% |
| ! | GAGCAGTGCTGAACCTCCAA+AGG | + | chr1_3:10286241-10286260 | Msa0103180:CDS | 55.0% |
| ! | TTCCGGTGCCAAAGAAACGC+GGG | + | chr1_3:10286339-10286358 | Msa0103180:CDS | 55.0% |
| !! | GACATCAAAGGGCGTCTTGC+GGG | + | chr1_3:10287267-10287286 | Msa0103180:CDS | 55.0% |
| !! | GATAGGGAGAGTGCCAAGAG+AGG | + | chr1_3:10288925-10288944 | Msa0103180:intron | 55.0% |
| ATCGTGTGATGTGGACCGCA+AGG | - | chr1_3:10288990-10289009 | None:intergenic | 55.0% | |
| TGATGCAGGTGCAGACACTG+CGG | - | chr1_3:10289034-10289053 | None:intergenic | 55.0% | |
| CTACATTGCGCCCTGTGATG+TGG | - | chr1_3:10289094-10289113 | None:intergenic | 55.0% | |
| CATCACAGGGCGCAATGTAG+TGG | + | chr1_3:10289094-10289113 | Msa0103180:intron | 55.0% | |
| AGGAGCTTGGAGTTGAGGCT+TGG | - | chr1_3:10289325-10289344 | None:intergenic | 55.0% | |
| GCTCCTAGCACTCCTCTTGT+AGG | + | chr1_3:10290626-10290645 | Msa0103180:intron | 55.0% | |
| GGTGCCTTTGTCAGTGGACG+TGG | + | chr1_3:10285899-10285918 | Msa0103180:CDS | 60.0% | |
| GAGCACATCGGGTAGTCCCA+GGG | + | chr1_3:10285950-10285969 | Msa0103180:CDS | 60.0% | |
| CTCCCGCGTTTCTTTGGCAC+CGG | - | chr1_3:10286344-10286363 | None:intergenic | 60.0% | |
| CAGCTTTGCGTCGCAGTAGG+AGG | + | chr1_3:10287381-10287400 | Msa0103180:intron | 60.0% | |
| GCGGTCCACATCACACGATG+TGG | + | chr1_3:10288991-10289010 | Msa0103180:intron | 60.0% | |
| TGCGGCCACATCGTGTGATG+TGG | - | chr1_3:10288999-10289018 | None:intergenic | 60.0% | |
| GGAGCACATCGGGTAGTCCC+AGG | + | chr1_3:10285949-10285968 | Msa0103180:CDS | 65.0% | |
| ! | CGGTGCCAAAGAAACGCGGG+AGG | + | chr1_3:10286342-10286361 | Msa0103180:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 10284778 | 10292032 | 10284778 | ID=Msa0103180;Name=Msa0103180 |
| chr1_3 | mRNA | 10284778 | 10292032 | 10284778 | ID=Msa0103180-mRNA-1;Parent=Msa0103180;Name=Msa0103180-mRNA-1;_AED=0.17;_eAED=0.17;_QI=256|0.62|0.55|0.88|0.5|0.66|9|0|600 |
| chr1_3 | exon | 10284778 | 10285093 | 10284778 | ID=Msa0103180-mRNA-1:exon:4281;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10285180 | 10285279 | 10285180 | ID=Msa0103180-mRNA-1:exon:4282;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10285829 | 10286924 | 10285829 | ID=Msa0103180-mRNA-1:exon:4283;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10287104 | 10287150 | 10287104 | ID=Msa0103180-mRNA-1:exon:4284;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10287226 | 10287288 | 10287226 | ID=Msa0103180-mRNA-1:exon:4285;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10287384 | 10287601 | 10287384 | ID=Msa0103180-mRNA-1:exon:4286;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10288150 | 10288268 | 10288150 | ID=Msa0103180-mRNA-1:exon:4287;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10291370 | 10291406 | 10291370 | ID=Msa0103180-mRNA-1:exon:4288;Parent=Msa0103180-mRNA-1 |
| chr1_3 | exon | 10291970 | 10292032 | 10291970 | ID=Msa0103180-mRNA-1:exon:4289;Parent=Msa0103180-mRNA-1 |
| chr1_3 | five_prime_UTR | 10284778 | 10285033 | 10284778 | ID=Msa0103180-mRNA-1:five_prime_utr;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10285034 | 10285093 | 10285034 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10285180 | 10285279 | 10285180 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10285829 | 10286924 | 10285829 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10287104 | 10287150 | 10287104 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10287226 | 10287288 | 10287226 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10287384 | 10287601 | 10287384 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10288150 | 10288268 | 10288150 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10291370 | 10291406 | 10291370 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| chr1_3 | CDS | 10291970 | 10292032 | 10291970 | ID=Msa0103180-mRNA-1:cds;Parent=Msa0103180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
