Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505150 | XP_024633708.1 | 95.332 | 407 | 9 | 2 | 1 | 407 | 1 | 397 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505150 | sp|P0C895|Y2010_ARATH | 57.105 | 373 | 147 | 3 | 38 | 407 | 11 | 373 | 8.40e-149 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505150 | A0A396IQ61 | 95.332 | 407 | 9 | 2 | 1 | 407 | 1 | 397 | 0.0 | 771 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0505150 | 0.809102 | 2.233746e-50 | -8.615850e-47 |
| Msa0008090 | Msa0505150 | 0.803373 | 3.596538e-49 | -8.615850e-47 |
| Msa0008410 | Msa0505150 | 0.838996 | 2.062835e-57 | -8.615850e-47 |
| Msa0016670 | Msa0505150 | 0.802105 | 6.568340e-49 | -8.615850e-47 |
| Msa0026660 | Msa0505150 | 0.803117 | 4.062696e-49 | -8.615850e-47 |
| Msa0027580 | Msa0505150 | 0.806858 | 6.707542e-50 | -8.615850e-47 |
| Msa0031510 | Msa0505150 | 0.809467 | 1.865007e-50 | -8.615850e-47 |
| Msa0032840 | Msa0505150 | -0.803981 | 2.689272e-49 | -8.615850e-47 |
| Msa0044020 | Msa0505150 | 0.804397 | 2.203278e-49 | -8.615850e-47 |
| Msa0047980 | Msa0505150 | 0.814303 | 1.650300e-51 | -8.615850e-47 |
| Msa0051270 | Msa0505150 | 0.800504 | 1.396939e-48 | -8.615850e-47 |
| Msa0053570 | Msa0505150 | 0.814748 | 1.315796e-51 | -8.615850e-47 |
| Msa0057140 | Msa0505150 | 0.809449 | 1.882281e-50 | -8.615850e-47 |
| Msa0057710 | Msa0505150 | 0.828503 | 8.672136e-55 | -8.615850e-47 |
| Msa0064350 | Msa0505150 | 0.816717 | 4.787655e-52 | -8.615850e-47 |
| Msa0068760 | Msa0505150 | 0.812805 | 3.523949e-51 | -8.615850e-47 |
| Msa0073670 | Msa0505150 | 0.843170 | 1.651618e-58 | -8.615850e-47 |
| Msa0074320 | Msa0505150 | 0.800648 | 1.305943e-48 | -8.615850e-47 |
| Msa0075340 | Msa0505150 | 0.806608 | 7.572586e-50 | -8.615850e-47 |
| Msa0076000 | Msa0505150 | 0.810911 | 9.110249e-51 | -8.615850e-47 |
| Msa0076040 | Msa0505150 | 0.836095 | 1.143598e-56 | -8.615850e-47 |
| Msa0077200 | Msa0505150 | 0.812941 | 3.289877e-51 | -8.615850e-47 |
| Msa0082280 | Msa0505150 | 0.837627 | 4.648773e-57 | -8.615850e-47 |
| Msa0094010 | Msa0505150 | 0.821064 | 4.924172e-53 | -8.615850e-47 |
| Msa0094950 | Msa0505150 | 0.829380 | 5.317632e-55 | -8.615850e-47 |
| Msa0099190 | Msa0505150 | 0.828801 | 7.343790e-55 | -8.615850e-47 |
| Msa0100800 | Msa0505150 | 0.800518 | 1.387833e-48 | -8.615850e-47 |
| Msa0101180 | Msa0505150 | 0.802774 | 4.782038e-49 | -8.615850e-47 |
| Msa0108870 | Msa0505150 | 0.818904 | 1.536517e-52 | -8.615850e-47 |
| Msa0111330 | Msa0505150 | 0.818545 | 1.854022e-52 | -8.615850e-47 |
| Msa0124990 | Msa0505150 | 0.812497 | 4.116130e-51 | -8.615850e-47 |
| Msa0126520 | Msa0505150 | 0.808119 | 3.621586e-50 | -8.615850e-47 |
| Msa0127820 | Msa0505150 | 0.802603 | 5.187085e-49 | -8.615850e-47 |
| Msa0155430 | Msa0505150 | 0.841125 | 5.744082e-58 | -8.615850e-47 |
| Msa0166750 | Msa0505150 | 0.827309 | 1.679964e-54 | -8.615850e-47 |
| Msa0167480 | Msa0505150 | 0.831971 | 1.233724e-55 | -8.615850e-47 |
| Msa0171850 | Msa0505150 | 0.809285 | 2.040856e-50 | -8.615850e-47 |
| Msa0173170 | Msa0505150 | 0.801539 | 8.586260e-49 | -8.615850e-47 |
| Msa0174770 | Msa0505150 | 0.853887 | 1.775616e-61 | -8.615850e-47 |
| Msa0177230 | Msa0505150 | 0.821478 | 3.952471e-53 | -8.615850e-47 |
| Msa0181610 | Msa0505150 | 0.852454 | 4.567245e-61 | -8.615850e-47 |
| Msa0182280 | Msa0505150 | 0.806878 | 6.641241e-50 | -8.615850e-47 |
| Msa0185400 | Msa0505150 | 0.849131 | 3.936111e-60 | -8.615850e-47 |
| Msa0186890 | Msa0505150 | 0.805369 | 1.380033e-49 | -8.615850e-47 |
| Msa0194540 | Msa0505150 | 0.806280 | 8.881201e-50 | -8.615850e-47 |
| Msa0199690 | Msa0505150 | 0.824323 | 8.591036e-54 | -8.615850e-47 |
| Msa0199880 | Msa0505150 | 0.800884 | 1.168591e-48 | -8.615850e-47 |
| Msa0226460 | Msa0505150 | 0.804144 | 2.486737e-49 | -8.615850e-47 |
| Msa0227400 | Msa0505150 | 0.818880 | 1.555761e-52 | -8.615850e-47 |
| Msa0236270 | Msa0505150 | 0.801564 | 8.484763e-49 | -8.615850e-47 |
| Msa0236980 | Msa0505150 | 0.800255 | 1.569991e-48 | -8.615850e-47 |
| Msa0372670 | Msa0505150 | 0.802394 | 5.728475e-49 | -8.615850e-47 |
| Msa0376280 | Msa0505150 | 0.808614 | 2.841072e-50 | -8.615850e-47 |
| Msa0376690 | Msa0505150 | 0.822582 | 2.193265e-53 | -8.615850e-47 |
| Msa0392940 | Msa0505150 | 0.833741 | 4.479331e-56 | -8.615850e-47 |
| Msa0394400 | Msa0505150 | 0.858235 | 9.468521e-63 | -8.615850e-47 |
| Msa0402330 | Msa0505150 | 0.843573 | 1.289185e-58 | -8.615850e-47 |
| Msa0403190 | Msa0505150 | 0.816010 | 6.894471e-52 | -8.615850e-47 |
| Msa0413450 | Msa0505150 | 0.940489 | 2.137152e-100 | -8.615850e-47 |
| Msa0416400 | Msa0505150 | 0.820379 | 7.076428e-53 | -8.615850e-47 |
| Msa0431770 | Msa0505150 | 0.820836 | 5.555799e-53 | -8.615850e-47 |
| Msa0432070 | Msa0505150 | 0.800719 | 1.263278e-48 | -8.615850e-47 |
| Msa0453230 | Msa0505150 | 0.815194 | 1.047188e-51 | -8.615850e-47 |
| Msa0462990 | Msa0505150 | 0.805291 | 1.432790e-49 | -8.615850e-47 |
| Msa0463500 | Msa0505150 | 0.810218 | 1.285703e-50 | -8.615850e-47 |
| Msa0469910 | Msa0505150 | -0.824538 | 7.646041e-54 | -8.615850e-47 |
| Msa0471590 | Msa0505150 | 0.821911 | 3.139538e-53 | -8.615850e-47 |
| Msa0481480 | Msa0505150 | 0.807073 | 6.039548e-50 | -8.615850e-47 |
| Msa0239450 | Msa0505150 | 0.845757 | 3.326810e-59 | -8.615850e-47 |
| Msa0242230 | Msa0505150 | 0.804815 | 1.801904e-49 | -8.615850e-47 |
| Msa0242680 | Msa0505150 | 0.822403 | 2.413550e-53 | -8.615850e-47 |
| Msa0259560 | Msa0505150 | 0.819734 | 9.940758e-53 | -8.615850e-47 |
| Msa0260240 | Msa0505150 | 0.828877 | 7.040952e-55 | -8.615850e-47 |
| Msa0260280 | Msa0505150 | 0.830289 | 3.193569e-55 | -8.615850e-47 |
| Msa0262480 | Msa0505150 | 0.813439 | 2.558490e-51 | -8.615850e-47 |
| Msa0264570 | Msa0505150 | 0.803414 | 3.525924e-49 | -8.615850e-47 |
| Msa0267870 | Msa0505150 | 0.819180 | 1.329833e-52 | -8.615850e-47 |
| Msa0280430 | Msa0505150 | 0.838516 | 2.744885e-57 | -8.615850e-47 |
| Msa0291520 | Msa0505150 | 0.870834 | 1.081622e-66 | -8.615850e-47 |
| Msa0304260 | Msa0505150 | 0.822781 | 1.971459e-53 | -8.615850e-47 |
| Msa0304300 | Msa0505150 | 0.815229 | 1.029043e-51 | -8.615850e-47 |
| Msa0304590 | Msa0505150 | 0.811377 | 7.217878e-51 | -8.615850e-47 |
| Msa0304660 | Msa0505150 | 0.810837 | 9.452245e-51 | -8.615850e-47 |
| Msa0310410 | Msa0505150 | 0.818248 | 2.164549e-52 | -8.615850e-47 |
| Msa0321170 | Msa0505150 | 0.813912 | 2.012882e-51 | -8.615850e-47 |
| Msa0321190 | Msa0505150 | 0.819223 | 1.300134e-52 | -8.615850e-47 |
| Msa0328210 | Msa0505150 | 0.830313 | 3.150399e-55 | -8.615850e-47 |
| Msa0331700 | Msa0505150 | 0.812916 | 3.331961e-51 | -8.615850e-47 |
| Msa0337510 | Msa0505150 | 0.801850 | 7.410114e-49 | -8.615850e-47 |
| Msa0355270 | Msa0505150 | 0.846724 | 1.815037e-59 | -8.615850e-47 |
| Msa0360990 | Msa0505150 | 0.813890 | 2.035315e-51 | -8.615850e-47 |
| Msa0484290 | Msa0505150 | 0.809510 | 1.825724e-50 | -8.615850e-47 |
| Msa0505150 | Msa0506940 | 0.804177 | 2.447734e-49 | -8.615850e-47 |
| Msa0505150 | Msa0513440 | 0.821987 | 3.013500e-53 | -8.615850e-47 |
| Msa0505150 | Msa0525340 | 0.817211 | 3.708911e-52 | -8.615850e-47 |
| Msa0505150 | Msa0526540 | 0.809175 | 2.154279e-50 | -8.615850e-47 |
| Msa0505150 | Msa0526890 | 0.805976 | 1.029119e-49 | -8.615850e-47 |
| Msa0505150 | Msa0529320 | 0.803934 | 2.750093e-49 | -8.615850e-47 |
| Msa0505150 | Msa0534080 | 0.804660 | 1.941661e-49 | -8.615850e-47 |
| Msa0505150 | Msa0541860 | 0.803264 | 3.788425e-49 | -8.615850e-47 |
| Msa0505150 | Msa0542160 | 0.816151 | 6.411652e-52 | -8.615850e-47 |
| Msa0505150 | Msa0545060 | 0.805022 | 1.631315e-49 | -8.615850e-47 |
| Msa0505150 | Msa0546360 | 0.803194 | 3.915318e-49 | -8.615850e-47 |
| Msa0505150 | Msa0550570 | 0.801401 | 9.162501e-49 | -8.615850e-47 |
| Msa0505150 | Msa0552810 | 0.830794 | 2.402251e-55 | -8.615850e-47 |
| Msa0505150 | Msa0560470 | 0.862619 | 4.457765e-64 | -8.615850e-47 |
| Msa0505150 | Msa0571920 | 0.800426 | 1.449013e-48 | -8.615850e-47 |
| Msa0505150 | Msa0576940 | 0.808876 | 2.497374e-50 | -8.615850e-47 |
| Msa0505150 | Msa0576980 | 0.829305 | 5.544018e-55 | -8.615850e-47 |
| Msa0505150 | Msa0580710 | 0.808883 | 2.488491e-50 | -8.615850e-47 |
| Msa0505150 | Msa0581070 | 0.865084 | 7.633069e-65 | -8.615850e-47 |
| Msa0505150 | Msa0585960 | 0.806173 | 9.354293e-50 | -8.615850e-47 |
| Msa0505150 | Msa0593700 | 0.803658 | 3.137653e-49 | -8.615850e-47 |
| Msa0505150 | Msa0600610 | 0.834998 | 2.167562e-56 | -8.615850e-47 |
| Msa0505150 | Msa0610090 | 0.805652 | 1.203555e-49 | -8.615850e-47 |
| Msa0505150 | Msa0610390 | 0.817561 | 3.093134e-52 | -8.615850e-47 |
| Msa0505150 | Msa0614490 | 0.843150 | 1.672116e-58 | -8.615850e-47 |
| Msa0505150 | Msa0615660 | 0.806562 | 7.746047e-50 | -8.615850e-47 |
| Msa0505150 | Msa0618040 | 0.801190 | 1.012194e-48 | -8.615850e-47 |
| Msa0505150 | Msa0618310 | 0.814143 | 1.789670e-51 | -8.615850e-47 |
| Msa0505150 | Msa0620990 | 0.820460 | 6.780977e-53 | -8.615850e-47 |
| Msa0505150 | Msa0623700 | 0.808923 | 2.439179e-50 | -8.615850e-47 |
| Msa0505150 | Msa0626680 | 0.801600 | 8.342866e-49 | -8.615850e-47 |
| Msa0505150 | Msa0639120 | 0.866825 | 2.148286e-65 | -8.615850e-47 |
| Msa0505150 | Msa0641140 | 0.817926 | 2.559992e-52 | -8.615850e-47 |
| Msa0505150 | Msa0647730 | 0.807234 | 5.582905e-50 | -8.615850e-47 |
| Msa0505150 | Msa0650920 | 0.817433 | 3.306311e-52 | -8.615850e-47 |
| Msa0505150 | Msa0652300 | 0.819777 | 9.719320e-53 | -8.615850e-47 |
| Msa0505150 | Msa0654870 | 0.804006 | 2.657004e-49 | -8.615850e-47 |
| Msa0505150 | Msa0657790 | 0.827849 | 1.246579e-54 | -8.615850e-47 |
| Msa0505150 | Msa0658480 | 0.813950 | 1.974501e-51 | -8.615850e-47 |
| Msa0505150 | Msa0659030 | 0.848085 | 7.672179e-60 | -8.615850e-47 |
| Msa0505150 | Msa0659990 | 0.801990 | 6.938243e-49 | -8.615850e-47 |
| Msa0505150 | Msa0663900 | 0.824141 | 9.477358e-54 | -8.615850e-47 |
| Msa0505150 | Msa0664960 | 0.834884 | 2.315310e-56 | -8.615850e-47 |
| Msa0505150 | Msa0666230 | 0.815571 | 8.634344e-52 | -8.615850e-47 |
| Msa0505150 | Msa0680240 | 0.806952 | 6.406022e-50 | -8.615850e-47 |
| Msa0505150 | Msa0683780 | 0.809321 | 2.004375e-50 | -8.615850e-47 |
| Msa0505150 | Msa0684500 | 0.806857 | 6.711312e-50 | -8.615850e-47 |
| Msa0505150 | Msa0687630 | 0.860236 | 2.377665e-63 | -8.615850e-47 |
| Msa0505150 | Msa0692080 | 0.808761 | 2.641671e-50 | -8.615850e-47 |
| Msa0505150 | Msa0692840 | 0.808726 | 2.688635e-50 | -8.615850e-47 |
| Msa0505150 | Msa0692940 | 0.812771 | 3.584470e-51 | -8.615850e-47 |
| Msa0505150 | Msa0697690 | 0.810655 | 1.034776e-50 | -8.615850e-47 |
| Msa0505150 | Msa0702340 | 0.830240 | 3.283030e-55 | -8.615850e-47 |
| Msa0505150 | Msa0702590 | 0.825857 | 3.729723e-54 | -8.615850e-47 |
| Msa0505150 | Msa0702660 | 0.834230 | 3.379683e-56 | -8.615850e-47 |
| Msa0505150 | Msa0703230 | 0.806795 | 6.916498e-50 | -8.615850e-47 |
| Msa0505150 | Msa0704800 | 0.812310 | 4.520747e-51 | -8.615850e-47 |
| Msa0505150 | Msa0705000 | 0.860684 | 1.739336e-63 | -8.615850e-47 |
| Msa0505150 | Msa0705040 | 0.867803 | 1.045112e-65 | -8.615850e-47 |
| Msa0505150 | Msa0707390 | 0.859868 | 3.070137e-63 | -8.615850e-47 |
| Msa0505150 | Msa0711490 | 0.802210 | 6.250567e-49 | -8.615850e-47 |
| Msa0505150 | Msa0716410 | 0.803297 | 3.728525e-49 | -8.615850e-47 |
| Msa0505150 | Msa0718740 | 0.804644 | 1.957056e-49 | -8.615850e-47 |
| Msa0505150 | Msa0724150 | 0.812425 | 4.266611e-51 | -8.615850e-47 |
| Msa0505150 | Msa0733480 | 0.809772 | 1.603912e-50 | -8.615850e-47 |
| Msa0505150 | Msa0734960 | 0.831023 | 2.110676e-55 | -8.615850e-47 |
| Msa0505150 | Msa0735310 | 0.818131 | 2.300647e-52 | -8.615850e-47 |
| Msa0505150 | Msa0743800 | 0.827492 | 1.518720e-54 | -8.615850e-47 |
| Msa0505150 | Msa0749760 | 0.805630 | 1.216852e-49 | -8.615850e-47 |
| Msa0505150 | Msa0750920 | 0.832798 | 7.695792e-56 | -8.615850e-47 |
| Msa0505150 | Msa0755340 | 0.841921 | 3.544257e-58 | -8.615850e-47 |
| Msa0505150 | Msa0759860 | 0.810732 | 9.956497e-51 | -8.615850e-47 |
| Msa0505150 | Msa0783180 | 0.804899 | 1.730778e-49 | -8.615850e-47 |
| Msa0505150 | Msa0787750 | 0.800179 | 1.627176e-48 | -8.615850e-47 |
| Msa0505150 | Msa0787810 | 0.814774 | 1.298425e-51 | -8.615850e-47 |
| Msa0505150 | Msa0788770 | 0.806236 | 9.075009e-50 | -8.615850e-47 |
| Msa0505150 | Msa0795660 | 0.809353 | 1.973207e-50 | -8.615850e-47 |
| Msa0505150 | Msa0797120 | 0.817581 | 3.062112e-52 | -8.615850e-47 |
| Msa0505150 | Msa0797750 | 0.855515 | 5.990304e-62 | -8.615850e-47 |
| Msa0505150 | Msa0798720 | 0.820001 | 8.636162e-53 | -8.615850e-47 |
| Msa0505150 | Msa0805500 | 0.819690 | 1.017254e-52 | -8.615850e-47 |
| Msa0505150 | Msa0814250 | 0.818829 | 1.597622e-52 | -8.615850e-47 |
| Msa0505150 | Msa0814320 | 0.819559 | 1.089847e-52 | -8.615850e-47 |
| Msa0505150 | Msa0819540 | 0.838902 | 2.182318e-57 | -8.615850e-47 |
| Msa0505150 | Msa0824640 | 0.848179 | 7.229727e-60 | -8.615850e-47 |
| Msa0505150 | Msa0824730 | 0.820494 | 6.660665e-53 | -8.615850e-47 |
| Msa0505150 | Msa0824910 | 0.814014 | 1.911310e-51 | -8.615850e-47 |
| Msa0505150 | Msa0836500 | 0.814280 | 1.669445e-51 | -8.615850e-47 |
| Msa0505150 | Msa0839200 | 0.804787 | 1.826745e-49 | -8.615850e-47 |
| Msa0505150 | Msa0847080 | 0.817498 | 3.196965e-52 | -8.615850e-47 |
| Msa0505150 | Msa0863370 | 0.800316 | 1.526311e-48 | -8.615850e-47 |
| Msa0505150 | Msa0864010 | 0.855201 | 7.395675e-62 | -8.615850e-47 |
| Msa0505150 | Msa0869010 | 0.801985 | 6.952080e-49 | -8.615850e-47 |
| Msa0505150 | Msa0871890 | 0.805217 | 1.484855e-49 | -8.615850e-47 |
| Msa0505150 | Msa0888940 | 0.845695 | 3.460317e-59 | -8.615850e-47 |
| Msa0505150 | Msa0898760 | 0.834459 | 2.960421e-56 | -8.615850e-47 |
| Msa0505150 | Msa0900630 | 0.804897 | 1.732690e-49 | -8.615850e-47 |
| Msa0505150 | Msa0905550 | 0.803015 | 4.265273e-49 | -8.615850e-47 |
| Msa0505150 | Msa0928120 | 0.814595 | 1.422128e-51 | -8.615850e-47 |
| Msa0505150 | Msa0930780 | 0.806344 | 8.610613e-50 | -8.615850e-47 |
| Msa0505150 | Msa0940830 | 0.816223 | 6.176047e-52 | -8.615850e-47 |
| Msa0505150 | Msa0943170 | 0.868831 | 4.873296e-66 | -8.615850e-47 |
| Msa0505150 | Msa0948250 | 0.812277 | 4.597146e-51 | -8.615850e-47 |
| Msa0505150 | Msa0959840 | 0.834156 | 3.527299e-56 | -8.615850e-47 |
| Msa0505150 | Msa0960830 | 0.819951 | 8.869501e-53 | -8.615850e-47 |
| Msa0505150 | Msa0963020 | 0.825393 | 4.802764e-54 | -8.615850e-47 |
| Msa0505150 | Msa0966270 | 0.800166 | 1.637353e-48 | -8.615850e-47 |
| Msa0505150 | Msa0966720 | -0.807937 | 3.959652e-50 | -8.615850e-47 |
| Msa0505150 | Msa0967370 | 0.834758 | 2.490667e-56 | -8.615850e-47 |
| Msa0505150 | Msa0976330 | 0.825193 | 5.356718e-54 | -8.615850e-47 |
| Msa0505150 | Msa0980940 | 0.831949 | 1.248840e-55 | -8.615850e-47 |
| Msa0505150 | Msa0985550 | 0.811533 | 6.675515e-51 | -8.615850e-47 |
| Msa0505150 | Msa1003440 | 0.810718 | 1.002989e-50 | -8.615850e-47 |
| Msa0505150 | Msa1004420 | 0.830005 | 3.745511e-55 | -8.615850e-47 |
| Msa0505150 | Msa1005820 | 0.814556 | 1.450823e-51 | -8.615850e-47 |
| Msa0505150 | Msa1019240 | 0.815551 | 8.724014e-52 | -8.615850e-47 |
| Msa0505150 | Msa1019260 | 0.816836 | 4.503661e-52 | -8.615850e-47 |
| Msa0505150 | Msa1025940 | 0.838751 | 2.387914e-57 | -8.615850e-47 |
| Msa0505150 | Msa1030930 | 0.843615 | 1.256976e-58 | -8.615850e-47 |
| Msa0505150 | Msa1040890 | 0.819812 | 9.540625e-53 | -8.615850e-47 |
| Msa0505150 | Msa1061920 | 0.803786 | 2.951541e-49 | -8.615850e-47 |
| Msa0505150 | Msa1070050 | 0.837762 | 4.292293e-57 | -8.615850e-47 |
| Msa0505150 | Msa1073400 | 0.815939 | 7.148995e-52 | -8.615850e-47 |
| Msa0505150 | Msa1082700 | 0.826755 | 2.279621e-54 | -8.615850e-47 |
| Msa0505150 | Msa1083880 | 0.847161 | 1.377740e-59 | -8.615850e-47 |
| Msa0505150 | Msa1093330 | 0.816482 | 5.404864e-52 | -8.615850e-47 |
| Msa0505150 | Msa1104210 | 0.800784 | 1.224991e-48 | -8.615850e-47 |
| Msa0505150 | Msa1119200 | 0.816517 | 5.308849e-52 | -8.615850e-47 |
| Msa0505150 | Msa1126510 | 0.835599 | 1.528055e-56 | -8.615850e-47 |
| Msa0505150 | Msa1126770 | 0.856459 | 3.170797e-62 | -8.615850e-47 |
| Msa0505150 | Msa1127830 | 0.806986 | 6.300787e-50 | -8.615850e-47 |
| Msa0505150 | Msa1127890 | 0.816262 | 6.055340e-52 | -8.615850e-47 |
| Msa0505150 | Msa1131560 | 0.826294 | 2.936108e-54 | -8.615850e-47 |
| Msa0505150 | Msa1134110 | 0.800659 | 1.298900e-48 | -8.615850e-47 |
| Msa0505150 | Msa1143840 | 0.812132 | 4.944680e-51 | -8.615850e-47 |
| Msa0505150 | Msa1148580 | 0.800623 | 1.321493e-48 | -8.615850e-47 |
| Msa0505150 | Msa1150970 | 0.819196 | 1.318829e-52 | -8.615850e-47 |
| Msa0505150 | Msa1165870 | 0.813383 | 2.631147e-51 | -8.615850e-47 |
| Msa0505150 | Msa1166330 | 0.814673 | 1.366624e-51 | -8.615850e-47 |
| Msa0505150 | Msa1166340 | 0.812453 | 4.208460e-51 | -8.615850e-47 |
| Msa0505150 | Msa1166860 | 0.828606 | 8.189466e-55 | -8.615850e-47 |
| Msa0505150 | Msa1166870 | 0.828229 | 1.009412e-54 | -8.615850e-47 |
| Msa0505150 | Msa1174100 | 0.850100 | 2.112832e-60 | -8.615850e-47 |
| Msa0505150 | Msa1179950 | 0.819809 | 9.558316e-53 | -8.615850e-47 |
| Msa0505150 | Msa1179980 | 0.828317 | 9.616084e-55 | -8.615850e-47 |
| Msa0505150 | Msa1183660 | 0.830512 | 2.816908e-55 | -8.615850e-47 |
| Msa0505150 | Msa1184370 | 0.875967 | 2.028441e-68 | -8.615850e-47 |
| Msa0505150 | Msa1185130 | 0.804654 | 1.947417e-49 | -8.615850e-47 |
| Msa0505150 | Msa1193950 | -0.812212 | 4.750450e-51 | -8.615850e-47 |
| Msa0505150 | Msa1199290 | 0.829393 | 5.278167e-55 | -8.615850e-47 |
| Msa0505150 | Msa1201830 | 0.880223 | 6.549721e-70 | -8.615850e-47 |
| Msa0505150 | Msa1202580 | 0.807051 | 6.103689e-50 | -8.615850e-47 |
| Msa0505150 | Msa1204830 | 0.809653 | 1.701617e-50 | -8.615850e-47 |
| Msa0505150 | Msa1204850 | 0.834656 | 2.642277e-56 | -8.615850e-47 |
| Msa0505150 | Msa1207730 | 0.804635 | 1.965290e-49 | -8.615850e-47 |
| Msa0505150 | Msa1224840 | 0.834813 | 2.411949e-56 | -8.615850e-47 |
| Msa0505150 | Msa1227690 | 0.872765 | 2.473659e-67 | -8.615850e-47 |
| Msa0505150 | Msa1228890 | 0.818808 | 1.615419e-52 | -8.615850e-47 |
| Msa0505150 | Msa1235250 | 0.812882 | 3.389619e-51 | -8.615850e-47 |
| Msa0505150 | Msa1236480 | 0.808842 | 2.538696e-50 | -8.615850e-47 |
| Msa0505150 | Msa1246430 | 0.820432 | 6.879235e-53 | -8.615850e-47 |
| Msa0505150 | Msa1246530 | -0.836223 | 1.061472e-56 | -8.615850e-47 |
| Msa0505150 | Msa1252190 | 0.816610 | 5.061661e-52 | -8.615850e-47 |
| Msa0505150 | Msa1253810 | 0.802957 | 4.383103e-49 | -8.615850e-47 |
| Msa0505150 | Msa1254710 | 0.841616 | 4.265423e-58 | -8.615850e-47 |
| Msa0505150 | Msa1255410 | 0.808011 | 3.818529e-50 | -8.615850e-47 |
| Msa0505150 | Msa1256770 | 0.808501 | 3.002900e-50 | -8.615850e-47 |
| Msa0505150 | Msa1270620 | 0.821554 | 3.795852e-53 | -8.615850e-47 |
| Msa0505150 | Msa1270690 | 0.823954 | 1.048978e-53 | -8.615850e-47 |
| Msa0505150 | Msa1271580 | 0.828945 | 6.778970e-55 | -8.615850e-47 |
| Msa0505150 | Msa1272460 | 0.839652 | 1.393663e-57 | -8.615850e-47 |
| Msa0505150 | Msa1280560 | 0.809282 | 2.043449e-50 | -8.615850e-47 |
| Msa0505150 | Msa1283170 | 0.818933 | 1.513304e-52 | -8.615850e-47 |
| Msa0505150 | Msa1283990 | 0.804802 | 1.813788e-49 | -8.615850e-47 |
| Msa0505150 | Msa1286510 | 0.827274 | 1.712294e-54 | -8.615850e-47 |
| Msa0505150 | Msa1290450 | 0.811966 | 5.372855e-51 | -8.615850e-47 |
| Msa0505150 | Msa1292830 | 0.813706 | 2.234722e-51 | -8.615850e-47 |
| Msa0505150 | Msa1294840 | 0.882243 | 1.226367e-70 | -8.615850e-47 |
| Msa0505150 | Msa1295490 | -0.801662 | 8.100123e-49 | -8.615850e-47 |
| Msa0505150 | Msa1299360 | 0.814750 | 1.314199e-51 | -8.615850e-47 |
| Msa0505150 | Msa1306990 | 0.841078 | 5.908325e-58 | -8.615850e-47 |
| Msa0505150 | Msa1307950 | 0.846360 | 2.281641e-59 | -8.615850e-47 |
| Msa0505150 | Msa1309130 | 0.844625 | 6.732238e-59 | -8.615850e-47 |
| Msa0505150 | Msa1310690 | 0.842130 | 3.120241e-58 | -8.615850e-47 |
| Msa0505150 | Msa1316830 | 0.802428 | 5.637705e-49 | -8.615850e-47 |
| Msa0505150 | Msa1325930 | 0.801631 | 8.220688e-49 | -8.615850e-47 |
| Msa0505150 | Msa1329450 | 0.805060 | 1.602028e-49 | -8.615850e-47 |
| Msa0505150 | Msa1335940 | 0.826880 | 2.128319e-54 | -8.615850e-47 |
| Msa0505150 | Msa1337730 | 0.803850 | 2.863231e-49 | -8.615850e-47 |
| Msa0505150 | Msa1344850 | 0.860945 | 1.449911e-63 | -8.615850e-47 |
| Msa0505150 | Msa1345450 | 0.847626 | 1.026571e-59 | -8.615850e-47 |
| Msa0505150 | Msa1349570 | 0.807564 | 4.752071e-50 | -8.615850e-47 |
| Msa0505150 | Msa1358430 | 0.829391 | 5.284801e-55 | -8.615850e-47 |
| Msa0505150 | Msa1359390 | 0.803187 | 3.928428e-49 | -8.615850e-47 |
| Msa0505150 | Msa1363330 | 0.802577 | 5.253093e-49 | -8.615850e-47 |
| Msa0505150 | Msa1363860 | 0.842834 | 2.029669e-58 | -8.615850e-47 |
| Msa0505150 | Msa1365150 | 0.860008 | 2.786593e-63 | -8.615850e-47 |
| Msa0505150 | Msa1365200 | 0.833344 | 5.627211e-56 | -8.615850e-47 |
| Msa0505150 | Msa1367880 | 0.846620 | 1.937775e-59 | -8.615850e-47 |
| Msa0505150 | Msa1370860 | 0.846488 | 2.104786e-59 | -8.615850e-47 |
| Msa0505150 | Msa1380970 | 0.842598 | 2.345674e-58 | -8.615850e-47 |
| Msa0505150 | Msa1381120 | 0.834667 | 2.624660e-56 | -8.615850e-47 |
| Msa0505150 | Msa1385070 | 0.800941 | 1.138120e-48 | -8.615850e-47 |
| Msa0505150 | Msa1386230 | 0.801369 | 9.302633e-49 | -8.615850e-47 |
| Msa0505150 | Msa1386600 | 0.802177 | 6.348305e-49 | -8.615850e-47 |
| Msa0505150 | Msa1387190 | 0.835353 | 1.762639e-56 | -8.615850e-47 |
| Msa0505150 | Msa1389680 | 0.812766 | 3.594263e-51 | -8.615850e-47 |
| Msa0505150 | Msa1390230 | 0.806879 | 6.637000e-50 | -8.615850e-47 |
| Msa0505150 | Msa1397810 | 0.811883 | 5.601606e-51 | -8.615850e-47 |
| Msa0505150 | Msa1397940 | 0.856955 | 2.266830e-62 | -8.615850e-47 |
| Msa0505150 | Msa1398860 | 0.806302 | 8.786041e-50 | -8.615850e-47 |
| Msa0505150 | Msa1404190 | 0.842975 | 1.861638e-58 | -8.615850e-47 |
| Msa0505150 | Msa1406040 | 0.805077 | 1.588738e-49 | -8.615850e-47 |
| Msa0505150 | Msa1427060 | 0.801156 | 1.028515e-48 | -8.615850e-47 |
| Msa0505150 | Msa1431040 | 0.821555 | 3.793310e-53 | -8.615850e-47 |
| Msa0505150 | Msa1435750 | 0.805068 | 1.595695e-49 | -8.615850e-47 |
| Msa0505150 | Msa1438640 | 0.884446 | 1.904930e-71 | -8.615850e-47 |
| Msa0505150 | Msa1442850 | 0.871957 | 4.598716e-67 | -8.615850e-47 |
| Msa0505150 | Msa1443930 | 0.808265 | 3.372278e-50 | -8.615850e-47 |
| Msa0505150 | Msa1450280 | 0.815016 | 1.147337e-51 | -8.615850e-47 |
| Msa0505150 | Msa1461490 | 0.813179 | 2.918346e-51 | -8.615850e-47 |
| Msa0505150 | Msa1462860 | 0.800212 | 1.601999e-48 | -8.615850e-47 |
| Msa0505150 | Msa1465080 | 0.844267 | 8.401579e-59 | -8.615850e-47 |
| Msa0505150 | Msa1466990 | 0.811484 | 6.840843e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505150 | MtrunA17_Chr3g0105881 | 95.332 | 407 | 9 | 2 | 1 | 407 | 1 | 397 | 0.0 | 771 |
| Msa0505150 | MtrunA17_Chr3g0086371 | 35.271 | 258 | 153 | 5 | 150 | 405 | 15 | 260 | 1.04e-46 | 160 |
| Msa0505150 | MtrunA17_Chr4g0058541 | 36.111 | 144 | 82 | 3 | 222 | 364 | 220 | 354 | 3.96e-16 | 80.1 |
| Msa0505150 | MtrunA17_Chr4g0058541 | 30.924 | 249 | 138 | 10 | 157 | 395 | 246 | 470 | 2.75e-15 | 77.4 |
| Msa0505150 | MtrunA17_Chr5g0407461 | 32.821 | 195 | 118 | 4 | 170 | 364 | 269 | 450 | 1.76e-15 | 78.2 |
| Msa0505150 | MtrunA17_Chr5g0407461 | 27.778 | 216 | 136 | 6 | 158 | 366 | 298 | 500 | 1.57e-14 | 75.5 |
| Msa0505150 | MtrunA17_Chr5g0407461 | 27.749 | 191 | 120 | 5 | 167 | 353 | 358 | 534 | 2.03e-11 | 65.9 |
| Msa0505150 | MtrunA17_Chr3g0116991 | 32.653 | 196 | 115 | 6 | 162 | 353 | 253 | 435 | 2.61e-15 | 77.8 |
| Msa0505150 | MtrunA17_Chr3g0116991 | 35.417 | 144 | 83 | 3 | 222 | 364 | 217 | 351 | 1.38e-14 | 75.5 |
| Msa0505150 | MtrunA17_Chr3g0116991 | 32.258 | 217 | 100 | 6 | 183 | 365 | 227 | 430 | 2.98e-13 | 71.2 |
| Msa0505150 | MtrunA17_Chr4g0052921 | 33.645 | 214 | 126 | 9 | 158 | 365 | 324 | 527 | 1.99e-14 | 75.5 |
| Msa0505150 | MtrunA17_Chr7g0218991 | 34.302 | 172 | 100 | 6 | 194 | 361 | 127 | 289 | 8.37e-14 | 73.6 |
| Msa0505150 | MtrunA17_Chr8g0370111 | 28.962 | 183 | 116 | 4 | 184 | 364 | 317 | 487 | 2.03e-13 | 72.0 |
| Msa0505150 | MtrunA17_Chr8g0370111 | 31.953 | 169 | 104 | 2 | 179 | 347 | 289 | 446 | 4.04e-13 | 70.9 |
| Msa0505150 | MtrunA17_Chr8g0370111 | 31.818 | 176 | 108 | 3 | 189 | 364 | 276 | 439 | 7.54e-13 | 70.1 |
| Msa0505150 | MtrunA17_Chr4g0071581 | 28.959 | 221 | 139 | 7 | 138 | 354 | 57 | 263 | 1.28e-12 | 68.6 |
| Msa0505150 | MtrunA17_Chr7g0237821 | 29.694 | 229 | 127 | 8 | 170 | 372 | 257 | 477 | 2.04e-12 | 69.3 |
| Msa0505150 | MtrunA17_Chr7g0237821 | 32.000 | 200 | 114 | 6 | 169 | 347 | 159 | 357 | 3.25e-12 | 68.6 |
| Msa0505150 | MtrunA17_Chr2g0317831 | 29.348 | 184 | 101 | 4 | 191 | 358 | 21 | 191 | 2.61e-12 | 68.6 |
| Msa0505150 | MtrunA17_Chr3g0144581 | 35.338 | 133 | 81 | 5 | 246 | 374 | 136 | 267 | 2.88e-12 | 68.6 |
| Msa0505150 | MtrunA17_Chr1g0165141 | 32.381 | 210 | 126 | 9 | 146 | 349 | 213 | 412 | 3.82e-12 | 68.6 |
| Msa0505150 | MtrunA17_Chr5g0412701 | 35.625 | 160 | 89 | 4 | 188 | 344 | 228 | 376 | 5.08e-12 | 67.4 |
| Msa0505150 | MtrunA17_Chr5g0447001 | 33.099 | 142 | 88 | 4 | 234 | 368 | 243 | 384 | 6.49e-12 | 67.4 |
| Msa0505150 | MtrunA17_Chr4g0058761 | 32.857 | 210 | 126 | 7 | 170 | 373 | 447 | 647 | 8.54e-12 | 67.4 |
| Msa0505150 | MtrunA17_Chr7g0257621 | 29.388 | 245 | 147 | 10 | 159 | 380 | 234 | 475 | 1.00e-11 | 67.0 |
| Msa0505150 | MtrunA17_Chr7g0257621 | 26.991 | 226 | 121 | 7 | 190 | 372 | 146 | 370 | 3.50e-11 | 65.1 |
| Msa0505150 | MtrunA17_Chr4g0054721 | 30.168 | 179 | 110 | 4 | 183 | 357 | 195 | 362 | 1.16e-11 | 66.2 |
| Msa0505150 | MtrunA17_Chr4g0054721 | 32.258 | 186 | 112 | 4 | 160 | 344 | 222 | 394 | 1.63e-11 | 65.9 |
| Msa0505150 | MtrunA17_Chr2g0298891 | 28.646 | 192 | 120 | 5 | 167 | 354 | 101 | 279 | 1.71e-11 | 65.1 |
| Msa0505150 | MtrunA17_Chr4g0051961 | 31.754 | 211 | 120 | 8 | 170 | 359 | 257 | 464 | 1.96e-11 | 66.2 |
| Msa0505150 | MtrunA17_Chr4g0034221 | 30.508 | 177 | 116 | 2 | 188 | 364 | 89 | 258 | 4.56e-11 | 65.1 |
| Msa0505150 | MtrunA17_Chr2g0280191 | 27.570 | 214 | 134 | 5 | 182 | 375 | 135 | 347 | 7.06e-11 | 64.3 |
| Msa0505150 | MtrunA17_Chr7g0244931 | 29.464 | 224 | 141 | 8 | 170 | 386 | 241 | 454 | 8.06e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505150 | AT2G30105.1 | 57.105 | 373 | 147 | 3 | 38 | 407 | 11 | 373 | 8.54e-150 | 429 |
| Msa0505150 | AT5G07910.1 | 37.452 | 259 | 150 | 4 | 149 | 406 | 15 | 262 | 3.96e-41 | 146 |
| Msa0505150 | AT4G26050.1 | 29.596 | 223 | 133 | 7 | 138 | 353 | 88 | 293 | 1.40e-15 | 78.2 |
| Msa0505150 | AT3G26500.1 | 30.000 | 240 | 137 | 9 | 160 | 372 | 165 | 400 | 2.98e-15 | 77.8 |
| Msa0505150 | AT2G19330.1 | 32.292 | 192 | 113 | 6 | 167 | 354 | 119 | 297 | 3.26e-14 | 73.9 |
| Msa0505150 | AT2G17440.1 | 25.163 | 306 | 190 | 7 | 71 | 347 | 115 | 410 | 1.32e-13 | 72.8 |
| Msa0505150 | AT2G17440.1 | 28.889 | 180 | 114 | 4 | 187 | 364 | 284 | 451 | 1.13e-11 | 67.0 |
| Msa0505150 | AT2G17440.1 | 29.412 | 187 | 114 | 5 | 162 | 344 | 306 | 478 | 2.83e-11 | 65.5 |
| Msa0505150 | AT4G20140.1 | 38.251 | 183 | 99 | 8 | 194 | 372 | 352 | 524 | 1.35e-13 | 73.6 |
| Msa0505150 | AT4G35470.1 | 30.811 | 185 | 114 | 4 | 184 | 366 | 297 | 469 | 1.75e-13 | 72.4 |
| Msa0505150 | AT4G35470.1 | 33.714 | 175 | 104 | 3 | 179 | 352 | 269 | 432 | 9.12e-13 | 70.5 |
| Msa0505150 | AT4G35470.2 | 30.811 | 185 | 114 | 4 | 184 | 366 | 297 | 469 | 2.28e-13 | 72.0 |
| Msa0505150 | AT4G35470.2 | 33.714 | 175 | 104 | 3 | 179 | 352 | 269 | 432 | 9.49e-13 | 70.1 |
| Msa0505150 | AT1G12970.1 | 32.692 | 208 | 118 | 8 | 160 | 349 | 166 | 369 | 3.65e-13 | 71.2 |
| Msa0505150 | AT1G12970.1 | 34.783 | 138 | 82 | 3 | 228 | 364 | 182 | 312 | 2.49e-12 | 68.6 |
| Msa0505150 | AT1G12970.1 | 29.648 | 199 | 120 | 6 | 157 | 347 | 204 | 390 | 6.40e-11 | 64.3 |
| Msa0505150 | AT5G44700.1 | 34.973 | 183 | 105 | 8 | 194 | 372 | 353 | 525 | 4.54e-13 | 71.6 |
| Msa0505150 | AT3G15410.1 | 30.723 | 166 | 91 | 3 | 191 | 343 | 21 | 175 | 5.17e-13 | 71.2 |
| Msa0505150 | AT3G15410.1 | 33.862 | 189 | 99 | 4 | 184 | 365 | 119 | 288 | 1.32e-12 | 69.7 |
| Msa0505150 | AT3G11330.1 | 34.028 | 144 | 85 | 3 | 222 | 364 | 215 | 349 | 5.76e-13 | 70.9 |
| Msa0505150 | AT3G11330.1 | 36.364 | 187 | 100 | 7 | 183 | 364 | 225 | 397 | 7.66e-12 | 67.4 |
| Msa0505150 | AT3G11330.1 | 27.843 | 255 | 151 | 8 | 120 | 353 | 191 | 433 | 2.81e-11 | 65.5 |
| Msa0505150 | AT5G48940.1 | 31.780 | 236 | 129 | 10 | 170 | 375 | 170 | 403 | 7.33e-13 | 71.2 |
| Msa0505150 | AT3G15410.2 | 33.862 | 189 | 99 | 4 | 184 | 365 | 125 | 294 | 1.49e-12 | 69.7 |
| Msa0505150 | AT3G15410.2 | 32.143 | 140 | 84 | 2 | 204 | 343 | 53 | 181 | 4.69e-12 | 68.2 |
| Msa0505150 | AT1G08590.1 | 28.826 | 281 | 154 | 11 | 149 | 395 | 46 | 314 | 3.29e-12 | 68.9 |
| Msa0505150 | AT5G05850.1 | 30.734 | 218 | 121 | 7 | 155 | 349 | 225 | 435 | 5.48e-12 | 67.8 |
| Msa0505150 | AT5G05850.1 | 36.364 | 187 | 100 | 7 | 183 | 364 | 231 | 403 | 3.92e-11 | 65.1 |
| Msa0505150 | AT4G29880.1 | 30.455 | 220 | 135 | 7 | 138 | 353 | 84 | 289 | 9.36e-12 | 66.6 |
| Msa0505150 | AT5G56040.2 | 30.978 | 184 | 114 | 7 | 170 | 349 | 257 | 431 | 2.44e-11 | 66.2 |
| Msa0505150 | AT5G56040.1 | 30.978 | 184 | 114 | 7 | 170 | 349 | 257 | 431 | 4.41e-11 | 65.5 |
Find 92 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTACTTCCTATATGATTAT+TGG | 0.126241 | 3_4:+50514568 | Msa0505150:three_prime_UTR |
| GTCTAATATTTGCTGAATTA+TGG | 0.152293 | 3_4:+50514621 | Msa0505150:three_prime_UTR |
| CAATAGTTATTTCTGTATTA+TGG | 0.188941 | 3_4:-50514171 | None:intergenic |
| ACCACTGAACTTCACGCTTA+TGG | 0.247375 | 3_4:-50509791 | None:intergenic |
| TGTTCAGAAAACGTTGAAAA+TGG | 0.248715 | 3_4:+50509726 | Msa0505150:CDS |
| GCTGGCCTTCCTGATGAAAT+AGG | 0.255143 | 3_4:+50512820 | Msa0505150:CDS |
| TGTTGGATGAATCAATTAAC+TGG | 0.277999 | 3_4:+50512579 | Msa0505150:CDS |
| AGTAAAATCAGTGAATTTAT+AGG | 0.289858 | 3_4:+50513124 | Msa0505150:CDS |
| AGTTATGCTTATGGCTTCTC+AGG | 0.308207 | 3_4:+50510055 | Msa0505150:CDS |
| CCTGATGAGGTTTGGATTTG+TGG | 0.315655 | 3_4:+50512346 | Msa0505150:CDS |
| AAGGCCAGCTAATTGATTAT+TGG | 0.315782 | 3_4:-50512806 | None:intergenic |
| TCTTGAAAGCCAACAATAAT+AGG | 0.326003 | 3_4:+50512863 | Msa0505150:CDS |
| GAACTTCACGCTTATGGTTA+TGG | 0.329665 | 3_4:-50509785 | None:intergenic |
| AAGAGACTTGAGTTCTTTGA+TGG | 0.342074 | 3_4:-50509848 | None:intergenic |
| TTCATTGTACCTATTATTGT+TGG | 0.358586 | 3_4:-50512872 | None:intergenic |
| TGGCTATCTTTCCTCGTTGT+TGG | 0.358694 | 3_4:-50510863 | None:intergenic |
| GCTGCTTCAAATTTGAGAAA+TGG | 0.364821 | 3_4:+50510026 | Msa0505150:CDS |
| ACCATGTAACTCACCGGTTC+TGG | 0.367890 | 3_4:-50512646 | None:intergenic |
| GTAAGTTGTGAAATTTCAAC+AGG | 0.371793 | 3_4:-50512418 | None:intergenic |
| TTGTTTAACAGGTAAGGTTT+TGG | 0.373873 | 3_4:+50509986 | Msa0505150:intron |
| TATTAATTCTAATAACTTGT+TGG | 0.379499 | 3_4:+50512562 | Msa0505150:CDS |
| GTAAAATCAGTGAATTTATA+GGG | 0.387035 | 3_4:+50513125 | Msa0505150:CDS |
| CTGCTTCAAATTTGAGAAAT+GGG | 0.396764 | 3_4:+50510027 | Msa0505150:CDS |
| AGGCCATACCTGATGAGGTT+TGG | 0.398152 | 3_4:+50512338 | Msa0505150:intron |
| GTCAGATGCCCTATTTCATC+AGG | 0.417982 | 3_4:-50512829 | None:intergenic |
| TCACACATTGATCTTCTTCA+AGG | 0.421656 | 3_4:+50509682 | Msa0505150:CDS |
| CCACAAATCCAAACCTCATC+AGG | 0.424745 | 3_4:-50512346 | None:intergenic |
| AATATTTCCAATAATCATAT+AGG | 0.426974 | 3_4:-50514575 | None:intergenic |
| TAATGATGTGAAGAAAATTC+CGG | 0.428289 | 3_4:+50510898 | Msa0505150:CDS |
| ACAACTTTGCCATCTGCGTT+GGG | 0.432785 | 3_4:+50512751 | Msa0505150:CDS |
| TGGGTCTAAAGTTATGCTTA+TGG | 0.436621 | 3_4:+50510046 | Msa0505150:CDS |
| TTGCTTGCAGCTTTCCACCT+TGG | 0.442166 | 3_4:+50514144 | Msa0505150:CDS |
| TACTATCATTGAACCAGAAC+CGG | 0.446260 | 3_4:+50512633 | Msa0505150:CDS |
| TGATTGAGGTGAAATTGAAA+TGG | 0.448406 | 3_4:-50509824 | None:intergenic |
| TGGGATCGATAACCTCTTTG+AGG | 0.453759 | 3_4:+50512770 | Msa0505150:CDS |
| GCTTCTCAGGGTTTATATCA+AGG | 0.455521 | 3_4:+50510068 | Msa0505150:CDS |
| CTGGCCTTCCTGATGAAATA+GGG | 0.456466 | 3_4:+50512821 | Msa0505150:CDS |
| GGTTCAATGATAGTACTGTT+AGG | 0.458087 | 3_4:-50512625 | None:intergenic |
| AACAACTTTGCCATCTGCGT+TGG | 0.464316 | 3_4:+50512750 | Msa0505150:CDS |
| CTAAAACTACTGAATGTCTC+TGG | 0.466762 | 3_4:-50513360 | None:intergenic |
| CTTTGCATCTTAGTAACAAT+GGG | 0.467481 | 3_4:+50514089 | Msa0505150:CDS |
| TTGGAACGGTGGAAAGCAAC+AGG | 0.470716 | 3_4:+50510932 | Msa0505150:CDS |
| ACCACACCAGAGGCATGTTA+AGG | 0.472651 | 3_4:-50514486 | None:intergenic |
| GATTGAGGTGAAATTGAAAT+GGG | 0.477695 | 3_4:-50509823 | None:intergenic |
| TTTCTTTCAGTTTGAAGGAT+GGG | 0.479136 | 3_4:+50514315 | Msa0505150:intron |
| TTGAAATTTCACAACTTACT+CGG | 0.495415 | 3_4:+50512422 | Msa0505150:CDS |
| AACATTCCTTAACATGCCTC+TGG | 0.497077 | 3_4:+50514480 | Msa0505150:three_prime_UTR |
| GGGATCGATAACCTCTTTGA+GGG | 0.505620 | 3_4:+50512771 | Msa0505150:CDS |
| AACTCTCAGAAAGCGACAAA+CGG | 0.507282 | 3_4:+50512714 | Msa0505150:intron |
| GTCTCCAATAATCAATTAGC+TGG | 0.517863 | 3_4:+50512802 | Msa0505150:CDS |
| CCTCTGGTGTGGTGGCAGAT+TGG | 0.518911 | 3_4:+50514496 | Msa0505150:three_prime_UTR |
| CTTCTCAGGGTTTATATCAA+GGG | 0.518957 | 3_4:+50510069 | Msa0505150:CDS |
| TTGGCCCCTTGGAAGAACAT+TGG | 0.519841 | 3_4:-50509884 | None:intergenic |
| CTGCCACCAATGTTCTTCCA+AGG | 0.522373 | 3_4:+50509878 | Msa0505150:CDS |
| TCCTGTCTTGAAGAGAGCTC+AGG | 0.525916 | 3_4:+50510835 | Msa0505150:CDS |
| TAAATAGGCCATACCTGATG+AGG | 0.529297 | 3_4:+50512333 | Msa0505150:intron |
| GCCTGAGCTCTCTTCAAGAC+AGG | 0.529659 | 3_4:-50510836 | None:intergenic |
| CATCATTACTAGAGCTTGAG+TGG | 0.530604 | 3_4:-50510883 | None:intergenic |
| TGAAATTGAAATGGGTATTG+TGG | 0.530969 | 3_4:-50509815 | None:intergenic |
| GTTATGCTTATGGCTTCTCA+GGG | 0.531457 | 3_4:+50510056 | Msa0505150:CDS |
| AGTTCTTTGATGGTTGATTG+AGG | 0.535316 | 3_4:-50509838 | None:intergenic |
| AGCATTGTCTGAATGCAACT+TGG | 0.542609 | 3_4:+50510961 | Msa0505150:CDS |
| GCCCCTTGGAAGAACATTGG+TGG | 0.542876 | 3_4:-50509881 | None:intergenic |
| TTCTGTATTATGGAGATCCA+AGG | 0.552344 | 3_4:-50514161 | None:intergenic |
| AACTATTGATATTCTTCGTG+AGG | 0.553098 | 3_4:+50514186 | Msa0505150:CDS |
| GTTTCTGATGCTTTGAGCGA+CGG | 0.553617 | 3_4:-50514354 | None:intergenic |
| ATTGTCTGAATGCAACTTGG+AGG | 0.555976 | 3_4:+50510964 | Msa0505150:CDS |
| GCTTTGCATCTTAGTAACAA+TGG | 0.556237 | 3_4:+50514088 | Msa0505150:CDS |
| CTTGGAAGAACATTGGTGGC+AGG | 0.562297 | 3_4:-50509877 | None:intergenic |
| TTAACATGCCTCTGGTGTGG+TGG | 0.562298 | 3_4:+50514488 | Msa0505150:three_prime_UTR |
| AATCCAAACCTCATCAGGTA+TGG | 0.568325 | 3_4:-50512341 | None:intergenic |
| ACCGTACCTCAACAAGAGAA+TGG | 0.569320 | 3_4:-50513153 | None:intergenic |
| TGCCACCAATGTTCTTCCAA+GGG | 0.570209 | 3_4:+50509879 | Msa0505150:CDS |
| GAAATGCCATTCTCTTGTTG+AGG | 0.574653 | 3_4:+50513147 | Msa0505150:CDS |
| TTCTCAGGGTTTATATCAAG+GGG | 0.575770 | 3_4:+50510070 | Msa0505150:CDS |
| TCCTTAACATGCCTCTGGTG+TGG | 0.578270 | 3_4:+50514485 | Msa0505150:three_prime_UTR |
| AAACAAATAGAATTCCGAGT+TGG | 0.580256 | 3_4:+50514373 | Msa0505150:CDS |
| TTTGGAAGATTCTGTGACAG+TGG | 0.587012 | 3_4:+50510004 | Msa0505150:CDS |
| GTTATCGATCCCAACGCAGA+TGG | 0.592731 | 3_4:-50512760 | None:intergenic |
| GTTGGATGAATCAATTAACT+GGG | 0.623225 | 3_4:+50512580 | Msa0505150:CDS |
| ACCATAAGCGTGAAGTTCAG+TGG | 0.625008 | 3_4:+50509790 | Msa0505150:CDS |
| GATGCCCTATTTCATCAGGA+AGG | 0.628283 | 3_4:-50512825 | None:intergenic |
| AATCTCTAGAAACTCCAACT+CGG | 0.645232 | 3_4:-50514387 | None:intergenic |
| TTGAAAATGGAAATCGATGG+CGG | 0.645679 | 3_4:+50509739 | Msa0505150:CDS |
| GCAAGAGTTCTACATTGCAA+CGG | 0.654515 | 3_4:+50512376 | Msa0505150:CDS |
| TGTATTATGGAGATCCAAGG+TGG | 0.659626 | 3_4:-50514158 | None:intergenic |
| GCCACCAATGTTCTTCCAAG+GGG | 0.666344 | 3_4:+50509880 | Msa0505150:CDS |
| CTCAGGCTGTTCCAACAACG+AGG | 0.670414 | 3_4:+50510852 | Msa0505150:CDS |
| GACGTGCAGCTCCCTCAAAG+AGG | 0.673870 | 3_4:-50512782 | None:intergenic |
| CCAATCTGCCACCACACCAG+AGG | 0.675773 | 3_4:-50514496 | None:intergenic |
| ACGTTGAAAATGGAAATCGA+TGG | 0.691196 | 3_4:+50509736 | Msa0505150:CDS |
| TAAGTTGTGAAATTTCAACA+GGG | 0.745389 | 3_4:-50512417 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAAAAATTAAAATTAC+CGG | + | chr3_4:50512193-50512212 | Msa0505150:intron | 10.0% |
| !!! | TTTGCAATTTTAATTTAAAT+AGG | + | chr3_4:50512318-50512337 | Msa0505150:intron | 10.0% |
| !!! | TGTTTTTTTATTAACTTAGT+TGG | + | chr3_4:50511403-50511422 | Msa0505150:intron | 15.0% |
| !!! | CATATTTTTCCATAATTTTA+AGG | + | chr3_4:50511538-50511557 | Msa0505150:intron | 15.0% |
| !! | CAAAAAATCTTTAAATTACA+AGG | - | chr3_4:50512015-50512034 | None:intergenic | 15.0% |
| !! | ATATCGAATTTCAAAATTTA+AGG | - | chr3_4:50512129-50512148 | None:intergenic | 15.0% |
| !! | TCTAAAAAATTAAAATTACC+GGG | + | chr3_4:50512194-50512213 | Msa0505150:intron | 15.0% |
| !!! | ATCTATAAATTTTTTCTCAT+TGG | + | chr3_4:50512487-50512506 | Msa0505150:intron | 15.0% |
| !!! | TATTAATTCTAATAACTTGT+TGG | + | chr3_4:50512562-50512581 | Msa0505150:CDS | 15.0% |
| !! | ATTTCACTTATGATTTAATT+CGG | - | chr3_4:50513244-50513263 | None:intergenic | 15.0% |
| !!! | CAATTTTTTTTTTGTTTTTG+TGG | + | chr3_4:50513299-50513318 | Msa0505150:intron | 15.0% |
| !! | TTGTAATTTCGAAAAATTTA+AGG | - | chr3_4:50513481-50513500 | None:intergenic | 15.0% |
| !! | TACATTCAATATTAAACTAA+TGG | + | chr3_4:50513787-50513806 | Msa0505150:intron | 15.0% |
| !! | AATATTTCCAATAATCATAT+AGG | - | chr3_4:50514578-50514597 | None:intergenic | 15.0% |
| !! | CTATTTACTCAAATTATTAC+CGG | - | chr3_4:50510240-50510259 | None:intergenic | 20.0% |
| !!! | ATGCTTTTAATTTGAAGTAT+TGG | + | chr3_4:50510310-50510329 | Msa0505150:intron | 20.0% |
| !!! | GTTATTTTCATAAGCTATTA+TGG | + | chr3_4:50510418-50510437 | Msa0505150:intron | 20.0% |
| !! | TCAAATATGTCATTCTAAAT+AGG | + | chr3_4:50510543-50510562 | Msa0505150:intron | 20.0% |
| !! | AATTGCTTATTTCATAATAC+AGG | + | chr3_4:50511190-50511209 | Msa0505150:intron | 20.0% |
| !!! | TTTTTATTAACTTAGTTGGA+AGG | + | chr3_4:50511407-50511426 | Msa0505150:intron | 20.0% |
| !!! | TGAATATTACATTTTGCAAA+GGG | + | chr3_4:50511744-50511763 | Msa0505150:intron | 20.0% |
| !!! | TATATAAATTTTATACCGGA+AGG | + | chr3_4:50511895-50511914 | Msa0505150:intron | 20.0% |
| !!! | ATATAAATTTTATACCGGAA+GGG | + | chr3_4:50511896-50511915 | Msa0505150:intron | 20.0% |
| !! | AATCCAAAAAAAACATTAGA+GGG | - | chr3_4:50511988-50512007 | None:intergenic | 20.0% |
| !! | AAATCTTTAAATTACAAGGT+TGG | - | chr3_4:50512011-50512030 | None:intergenic | 20.0% |
| !! | AGAAGAATCTTTAAATTACA+AGG | + | chr3_4:50512165-50512184 | Msa0505150:intron | 20.0% |
| !! | CTAAAAAATTAAAATTACCG+GGG | + | chr3_4:50512195-50512214 | Msa0505150:intron | 20.0% |
| !! | TAAAAAATTAAAATTACCGG+GGG | + | chr3_4:50512196-50512215 | Msa0505150:intron | 20.0% |
| !! | TTGACAAGCAATTAAAATTA+GGG | - | chr3_4:50512268-50512287 | None:intergenic | 20.0% |
| !! | ATTGACAAGCAATTAAAATT+AGG | - | chr3_4:50512269-50512288 | None:intergenic | 20.0% |
| !! | AGTAAAATCAGTGAATTTAT+AGG | + | chr3_4:50513124-50513143 | Msa0505150:CDS | 20.0% |
| !! | GTAAAATCAGTGAATTTATA+GGG | + | chr3_4:50513125-50513144 | Msa0505150:CDS | 20.0% |
| !!! | GGATTTTTTTTTTGCATTTT+TGG | + | chr3_4:50513607-50513626 | Msa0505150:intron | 20.0% |
| !! | CTTAACTCATTAGATTTAAA+GGG | - | chr3_4:50513761-50513780 | None:intergenic | 20.0% |
| !! | ACTTAACTCATTAGATTTAA+AGG | - | chr3_4:50513762-50513781 | None:intergenic | 20.0% |
| !! | ATTCAATATTAAACTAATGG+TGG | + | chr3_4:50513790-50513809 | Msa0505150:intron | 20.0% |
| !!! | CAATAGTTATTTCTGTATTA+TGG | - | chr3_4:50514174-50514193 | None:intergenic | 20.0% |
| !!! | AAGTATTGCATTTTAATTGA+AGG | + | chr3_4:50514246-50514265 | Msa0505150:intron | 20.0% |
| !!! | TATTGGAAATATTTTTCTAG+TGG | + | chr3_4:50514585-50514604 | Msa0505150:three_prime_UTR | 20.0% |
| ! | TGAATGTTGAATTGTTTAAC+AGG | + | chr3_4:50509975-50509994 | Msa0505150:intron | 25.0% |
| !!! | TCATAGATTATAGTCTTGTT+TGG | + | chr3_4:50510337-50510356 | Msa0505150:intron | 25.0% |
| ! | ATAAGTGTTTATCGTATAAG+TGG | + | chr3_4:50510388-50510407 | Msa0505150:intron | 25.0% |
| ! | AAGCTATTATGGAGAATTTA+TGG | + | chr3_4:50510429-50510448 | Msa0505150:intron | 25.0% |
| ! | TTATGGTTGAGGTAAATAAT+TGG | + | chr3_4:50510576-50510595 | Msa0505150:intron | 25.0% |
| ! | TATGGTTGAGGTAAATAATT+GGG | + | chr3_4:50510577-50510596 | Msa0505150:intron | 25.0% |
| ! | TTATTATGCTACTCAGTAAA+AGG | + | chr3_4:50510709-50510728 | Msa0505150:intron | 25.0% |
| !!! | AGATTTCATATGTTTTGTTC+AGG | + | chr3_4:50510808-50510827 | Msa0505150:intron | 25.0% |
| ! | TAATGATGTGAAGAAAATTC+CGG | + | chr3_4:50510898-50510917 | Msa0505150:CDS | 25.0% |
| !! | TTTTTATGTCAACTGGAAAT+TGG | + | chr3_4:50511034-50511053 | Msa0505150:intron | 25.0% |
| !! | TTTTATGTCAACTGGAAATT+GGG | + | chr3_4:50511035-50511054 | Msa0505150:intron | 25.0% |
| ! | TGATTTGATGAACTAGTAAA+TGG | - | chr3_4:50511249-50511268 | None:intergenic | 25.0% |
| ! | TTAGTTATTCGAACGTTTAA+AGG | + | chr3_4:50511292-50511311 | Msa0505150:intron | 25.0% |
| ! | TAGTTATTCGAACGTTTAAA+GGG | + | chr3_4:50511293-50511312 | Msa0505150:intron | 25.0% |
| ! | TCTAATATGAATTTAGTCAC+AGG | - | chr3_4:50511362-50511381 | None:intergenic | 25.0% |
| ! | TTATGGAAAAATATGAGCAA+AGG | - | chr3_4:50511533-50511552 | None:intergenic | 25.0% |
| !! | TTTTGCGAACCTTAAAATTA+TGG | - | chr3_4:50511550-50511569 | None:intergenic | 25.0% |
| ! | TGACTAAACATAGTAATACT+TGG | - | chr3_4:50511687-50511706 | None:intergenic | 25.0% |
| !! | GTGAATATTACATTTTGCAA+AGG | + | chr3_4:50511743-50511762 | Msa0505150:intron | 25.0% |
| ! | AAAGAATTACAAAAGCTAGA+TGG | + | chr3_4:50511862-50511881 | Msa0505150:intron | 25.0% |
| ! | ATCCAAAAAAAACATTAGAG+GGG | - | chr3_4:50511987-50512006 | None:intergenic | 25.0% |
| ! | GAATCCAAAAAAAACATTAG+AGG | - | chr3_4:50511989-50512008 | None:intergenic | 25.0% |
| ! | TACAAAATAGATGATATGAC+AGG | + | chr3_4:50512062-50512081 | Msa0505150:intron | 25.0% |
| ! | ACAAAATAGATGATATGACA+GGG | + | chr3_4:50512063-50512082 | Msa0505150:intron | 25.0% |
| !! | TTTGAAATTCGATATCATGA+AGG | + | chr3_4:50512134-50512153 | Msa0505150:intron | 25.0% |
| ! | GAATCTTTAAATTACAAGGT+TGG | + | chr3_4:50512169-50512188 | Msa0505150:intron | 25.0% |
| !! | AAACCAAAATTTGCTCAAAT+TGG | + | chr3_4:50512219-50512238 | Msa0505150:intron | 25.0% |
| !! | AACCAAAATTTGCTCAAATT+GGG | + | chr3_4:50512220-50512239 | Msa0505150:intron | 25.0% |
| !!! | TTTTAATTGCTTGTCAATTG+TGG | + | chr3_4:50512271-50512290 | Msa0505150:intron | 25.0% |
| ! | AATTGCAAACAAAAGTAAAG+AGG | - | chr3_4:50512307-50512326 | None:intergenic | 25.0% |
| ! | TAAGTTGTGAAATTTCAACA+GGG | - | chr3_4:50512420-50512439 | None:intergenic | 25.0% |
| ! | TTGAAATTTCACAACTTACT+CGG | + | chr3_4:50512422-50512441 | Msa0505150:CDS | 25.0% |
| ! | TTCATTGTACCTATTATTGT+TGG | - | chr3_4:50512875-50512894 | None:intergenic | 25.0% |
| !!! | TTTTGATAATAACCACTAAG+TGG | + | chr3_4:50513045-50513064 | Msa0505150:intron | 25.0% |
| !! | ACTAAGAAACTTTCTGAAAA+AGG | - | chr3_4:50513205-50513224 | None:intergenic | 25.0% |
| !!! | TTTTTCAGAAAGTTTCTTAG+TGG | + | chr3_4:50513204-50513223 | Msa0505150:intron | 25.0% |
| !! | TAATCTCTTTTTCTTAGATG+AGG | + | chr3_4:50513266-50513285 | Msa0505150:intron | 25.0% |
| !!! | TTTTTTTTTCCTTCCAAGAT+TGG | + | chr3_4:50513398-50513417 | Msa0505150:intron | 25.0% |
| ! | AATTAACGAGGTAAAACAAA+TGG | - | chr3_4:50513520-50513539 | None:intergenic | 25.0% |
| ! | ATTTGAGAACAAAATTAACG+AGG | - | chr3_4:50513532-50513551 | None:intergenic | 25.0% |
| ! | GCTAAAAGAAGATATATTCA+AGG | + | chr3_4:50513586-50513605 | Msa0505150:intron | 25.0% |
| !! | ATTAGAGTAAACAGTGATTT+TGG | - | chr3_4:50513676-50513695 | None:intergenic | 25.0% |
| ! | AAATTTGTATCACAGTGATA+GGG | + | chr3_4:50513864-50513883 | Msa0505150:intron | 25.0% |
| !! | AGTTAATTTTGCAAGTATCT+GGG | + | chr3_4:50513913-50513932 | Msa0505150:intron | 25.0% |
| ! | GTTACTTCCTATATGATTAT+TGG | + | chr3_4:50514568-50514587 | Msa0505150:three_prime_UTR | 25.0% |
| !! | GTCTAATATTTGCTGAATTA+TGG | + | chr3_4:50514621-50514640 | Msa0505150:three_prime_UTR | 25.0% |
| TGTTCAGAAAACGTTGAAAA+TGG | + | chr3_4:50509726-50509745 | Msa0505150:CDS | 30.0% | |
| ! | TGAAATTGAAATGGGTATTG+TGG | - | chr3_4:50509818-50509837 | None:intergenic | 30.0% |
| GATTGAGGTGAAATTGAAAT+GGG | - | chr3_4:50509826-50509845 | None:intergenic | 30.0% | |
| TGATTGAGGTGAAATTGAAA+TGG | - | chr3_4:50509827-50509846 | None:intergenic | 30.0% | |
| !! | AACCTTTGAAGATGAGTTTT+TGG | - | chr3_4:50509906-50509925 | None:intergenic | 30.0% |
| TCACACATCAATGAACAAAA+GGG | - | chr3_4:50509954-50509973 | None:intergenic | 30.0% | |
| TTCACACATCAATGAACAAA+AGG | - | chr3_4:50509955-50509974 | None:intergenic | 30.0% | |
| GTTGAATTGTTTAACAGGTA+AGG | + | chr3_4:50509980-50509999 | Msa0505150:intron | 30.0% | |
| ! | TTGTTTAACAGGTAAGGTTT+TGG | + | chr3_4:50509986-50510005 | Msa0505150:intron | 30.0% |
| CTGCTTCAAATTTGAGAAAT+GGG | + | chr3_4:50510027-50510046 | Msa0505150:CDS | 30.0% | |
| TCCATGTGTTGTATGATATT+CGG | - | chr3_4:50510215-50510234 | None:intergenic | 30.0% | |
| TAAGTACTTGTAAGACTGTT+TGG | - | chr3_4:50510509-50510528 | None:intergenic | 30.0% | |
| !! | AAATAGGTCGTATGGTTTTA+TGG | + | chr3_4:50510559-50510578 | Msa0505150:intron | 30.0% |
| ATGGTTGAGGTAAATAATTG+GGG | + | chr3_4:50510578-50510597 | Msa0505150:intron | 30.0% | |
| !! | AATCTACAAGCTTCACTTTT+CGG | - | chr3_4:50510793-50510812 | None:intergenic | 30.0% |
| !! | TTCATATGTTTTGTTCAGGA+TGG | + | chr3_4:50510812-50510831 | Msa0505150:intron | 30.0% |
| AGAAAATTCCGGTAAAAAAC+AGG | + | chr3_4:50510909-50510928 | Msa0505150:CDS | 30.0% | |
| ! | GCTTAGATTTTTATGTCAAC+TGG | + | chr3_4:50511027-50511046 | Msa0505150:intron | 30.0% |
| ! | AACGCATTAGGTTTTACTTA+AGG | + | chr3_4:50511066-50511085 | Msa0505150:intron | 30.0% |
| ! | ACGCATTAGGTTTTACTTAA+GGG | + | chr3_4:50511067-50511086 | Msa0505150:intron | 30.0% |
| ! | TTCTATGCCATATATGCTTT+TGG | + | chr3_4:50511131-50511150 | Msa0505150:intron | 30.0% |
| ! | TTTACATGTTAGAGGTATGT+AGG | + | chr3_4:50511167-50511186 | Msa0505150:intron | 30.0% |
| TAATACAGGATGATTAGAGA+TGG | + | chr3_4:50511204-50511223 | Msa0505150:intron | 30.0% | |
| AATACAGGATGATTAGAGAT+GGG | + | chr3_4:50511205-50511224 | Msa0505150:intron | 30.0% | |
| AGTTATTCGAACGTTTAAAG+GGG | + | chr3_4:50511294-50511313 | Msa0505150:intron | 30.0% | |
| ! | TTTAGAACTATGTCATGACA+TGG | - | chr3_4:50511433-50511452 | None:intergenic | 30.0% |
| !! | CATGACATAGTTCTAAATTG+CGG | + | chr3_4:50511436-50511455 | Msa0505150:intron | 30.0% |
| CCTTCTAAACCTTTATATTG+CGG | - | chr3_4:50511481-50511500 | None:intergenic | 30.0% | |
| AACACATGTCTAAAAGTGAA+TGG | - | chr3_4:50511575-50511594 | None:intergenic | 30.0% | |
| !! | TTCACTTTTAGACATGTGTT+AGG | + | chr3_4:50511575-50511594 | Msa0505150:intron | 30.0% |
| !! | AAGGGATGATACTACTTTTA+AGG | + | chr3_4:50511914-50511933 | Msa0505150:intron | 30.0% |
| !! | AGGGATGATACTACTTTTAA+GGG | + | chr3_4:50511915-50511934 | Msa0505150:intron | 30.0% |
| TAAACCAAAATTCGCTCAAA+TGG | - | chr3_4:50511963-50511982 | None:intergenic | 30.0% | |
| TCCAAAAAAAACATTAGAGG+GGG | - | chr3_4:50511986-50512005 | None:intergenic | 30.0% | |
| TGTACAGTCAAATTTCACAA+AGG | - | chr3_4:50512046-50512065 | None:intergenic | 30.0% | |
| CAAAATAGATGATATGACAG+GGG | + | chr3_4:50512064-50512083 | Msa0505150:intron | 30.0% | |
| AAAATAGATGATATGACAGG+GGG | + | chr3_4:50512065-50512084 | Msa0505150:intron | 30.0% | |
| ! | ACCAAAATTTGCTCAAATTG+GGG | + | chr3_4:50512221-50512240 | Msa0505150:intron | 30.0% |
| GTAAGTTGTGAAATTTCAAC+AGG | - | chr3_4:50512421-50512440 | None:intergenic | 30.0% | |
| ! | TAGACTTTTCTCATTCTTCA+TGG | + | chr3_4:50512457-50512476 | Msa0505150:intron | 30.0% |
| TGTTGGATGAATCAATTAAC+TGG | + | chr3_4:50512579-50512598 | Msa0505150:CDS | 30.0% | |
| GTTGGATGAATCAATTAACT+GGG | + | chr3_4:50512580-50512599 | Msa0505150:CDS | 30.0% | |
| TCTGAGAGTTAAACAAAAAC+AGG | - | chr3_4:50512704-50512723 | None:intergenic | 30.0% | |
| TCTTGAAAGCCAACAATAAT+AGG | + | chr3_4:50512863-50512882 | Msa0505150:CDS | 30.0% | |
| ATTAGCATTAGACATTGGAT+AGG | - | chr3_4:50512958-50512977 | None:intergenic | 30.0% | |
| TATCCAATGTCTAATGCTAA+TGG | + | chr3_4:50512957-50512976 | Msa0505150:intron | 30.0% | |
| ATCCAATGTCTAATGCTAAT+GGG | + | chr3_4:50512958-50512977 | Msa0505150:intron | 30.0% | |
| !! | TAATGCTAATGGGTTTACTT+AGG | + | chr3_4:50512968-50512987 | Msa0505150:intron | 30.0% |
| !!! | TTTTTTTGTTTTTGTGGAGC+AGG | + | chr3_4:50513305-50513324 | Msa0505150:intron | 30.0% |
| !!! | CAGTAGTTTTAGCAATTTGA+AGG | + | chr3_4:50513371-50513390 | Msa0505150:CDS | 30.0% |
| !!! | TAGTTTTAGCAATTTGAAGG+TGG | + | chr3_4:50513374-50513393 | Msa0505150:intron | 30.0% |
| ! | ACCATTCTTCTGAAAGTAAA+CGG | + | chr3_4:50513427-50513446 | Msa0505150:intron | 30.0% |
| !!! | TTTTGCATTTTTGGTACACT+CGG | + | chr3_4:50513616-50513635 | Msa0505150:intron | 30.0% |
| ! | AATTCACTTCTGAGAAATTG+AGG | + | chr3_4:50513836-50513855 | Msa0505150:intron | 30.0% |
| CAAATTTGTATCACAGTGAT+AGG | + | chr3_4:50513863-50513882 | Msa0505150:intron | 30.0% | |
| ! | GAGTTAATTTTGCAAGTATC+TGG | + | chr3_4:50513912-50513931 | Msa0505150:intron | 30.0% |
| ATCACATGCTCAAAGTAAAA+TGG | + | chr3_4:50513999-50514018 | Msa0505150:intron | 30.0% | |
| ! | GCAAGAAAAGTTAGCATTTT+TGG | - | chr3_4:50514037-50514056 | None:intergenic | 30.0% |
| ! | CTGCATAATTTTCACAAATG+TGG | - | chr3_4:50514068-50514087 | None:intergenic | 30.0% |
| CACATTTGTGAAAATTATGC+AGG | + | chr3_4:50514066-50514085 | Msa0505150:intron | 30.0% | |
| CTTTGCATCTTAGTAACAAT+GGG | + | chr3_4:50514089-50514108 | Msa0505150:CDS | 30.0% | |
| !!! | CAAGTCTTGAATAGTTTTGA+TGG | - | chr3_4:50514127-50514146 | None:intergenic | 30.0% |
| AACTATTGATATTCTTCGTG+AGG | + | chr3_4:50514186-50514205 | Msa0505150:CDS | 30.0% | |
| GGCTTATCATAGTTATTCAT+TGG | + | chr3_4:50514267-50514286 | Msa0505150:intron | 30.0% | |
| ! | TTTTCTTTCAGTTTGAAGGA+TGG | + | chr3_4:50514314-50514333 | Msa0505150:intron | 30.0% |
| TTTCTTTCAGTTTGAAGGAT+GGG | + | chr3_4:50514315-50514334 | Msa0505150:intron | 30.0% | |
| AAACAAATAGAATTCCGAGT+TGG | + | chr3_4:50514373-50514392 | Msa0505150:CDS | 30.0% | |
| !! | GTTTCTAGAGATTTTGATGA+AGG | + | chr3_4:50514397-50514416 | Msa0505150:CDS | 30.0% |
| TCACACATTGATCTTCTTCA+AGG | + | chr3_4:50509682-50509701 | Msa0505150:CDS | 35.0% | |
| ACGTTGAAAATGGAAATCGA+TGG | + | chr3_4:50509736-50509755 | Msa0505150:CDS | 35.0% | |
| TTGAAAATGGAAATCGATGG+CGG | + | chr3_4:50509739-50509758 | Msa0505150:CDS | 35.0% | |
| ! | AGTTCTTTGATGGTTGATTG+AGG | - | chr3_4:50509841-50509860 | None:intergenic | 35.0% |
| AAGAGACTTGAGTTCTTTGA+TGG | - | chr3_4:50509851-50509870 | None:intergenic | 35.0% | |
| GCTGCTTCAAATTTGAGAAA+TGG | + | chr3_4:50510026-50510045 | Msa0505150:CDS | 35.0% | |
| ! | TGGGTCTAAAGTTATGCTTA+TGG | + | chr3_4:50510046-50510065 | Msa0505150:CDS | 35.0% |
| CTTCTCAGGGTTTATATCAA+GGG | + | chr3_4:50510069-50510088 | Msa0505150:CDS | 35.0% | |
| TTCTCAGGGTTTATATCAAG+GGG | + | chr3_4:50510070-50510089 | Msa0505150:CDS | 35.0% | |
| !! | TGTTGTATGATATTCGGTGT+CGG | - | chr3_4:50510209-50510228 | None:intergenic | 35.0% |
| ACCGAATATCATACAACACA+TGG | + | chr3_4:50510211-50510230 | Msa0505150:intron | 35.0% | |
| GTCATTCTAAATAGGTCGTA+TGG | + | chr3_4:50510551-50510570 | Msa0505150:intron | 35.0% | |
| TGGTTGAGGTAAATAATTGG+GGG | + | chr3_4:50510579-50510598 | Msa0505150:intron | 35.0% | |
| AATTCCGGTAAAAAACAGGT+TGG | + | chr3_4:50510913-50510932 | Msa0505150:CDS | 35.0% | |
| TGGAGGTAAACAATTAGTCA+TGG | + | chr3_4:50510981-50511000 | Msa0505150:intron | 35.0% | |
| ! | AAACGCTCCAAAAGCATATA+TGG | - | chr3_4:50511141-50511160 | None:intergenic | 35.0% |
| CATACCTCTAACATGTAAAC+CGG | - | chr3_4:50511166-50511185 | None:intergenic | 35.0% | |
| !! | TGATTAGAGATGGGCTATTT+AGG | + | chr3_4:50511214-50511233 | Msa0505150:intron | 35.0% |
| CAATTGCAACCGCAATATAA+AGG | + | chr3_4:50511469-50511488 | Msa0505150:intron | 35.0% | |
| CCGCAATATAAAGGTTTAGA+AGG | + | chr3_4:50511478-50511497 | Msa0505150:intron | 35.0% | |
| TGGAAAAATATGAGCAAAGG+TGG | - | chr3_4:50511530-50511549 | None:intergenic | 35.0% | |
| !!! | CTGTGCTCAACTTGTTTTAT+AGG | + | chr3_4:50511643-50511662 | Msa0505150:intron | 35.0% |
| TGTTCTTTCAGCTTTCTCAT+GGG | - | chr3_4:50511827-50511846 | None:intergenic | 35.0% | |
| ATGTTCTTTCAGCTTTCTCA+TGG | - | chr3_4:50511828-50511847 | None:intergenic | 35.0% | |
| AGAAAGCTGAAAGAACATGA+GGG | + | chr3_4:50511830-50511849 | Msa0505150:intron | 35.0% | |
| AAAAGTAGTATCATCCCTTC+CGG | - | chr3_4:50511913-50511932 | None:intergenic | 35.0% | |
| AAAATTCGCTCAAATGGCAA+GGG | - | chr3_4:50511957-50511976 | None:intergenic | 35.0% | |
| !!! | ACCCCCTCTAATGTTTTTTT+TGG | + | chr3_4:50511982-50512001 | Msa0505150:intron | 35.0% |
| ! | CCAAAATTTGCTCAAATTGG+GGG | + | chr3_4:50512222-50512241 | Msa0505150:intron | 35.0% |
| ! | CAAAATTTGCTCAAATTGGG+GGG | + | chr3_4:50512223-50512242 | Msa0505150:intron | 35.0% |
| ! | AAAATTTGCTCAAATTGGGG+GGG | + | chr3_4:50512224-50512243 | Msa0505150:intron | 35.0% |
| GGTTCAATGATAGTACTGTT+AGG | - | chr3_4:50512628-50512647 | None:intergenic | 35.0% | |
| TACTATCATTGAACCAGAAC+CGG | + | chr3_4:50512633-50512652 | Msa0505150:CDS | 35.0% | |
| CATATAACCATGTAACTCAC+CGG | - | chr3_4:50512655-50512674 | None:intergenic | 35.0% | |
| GTCTCCAATAATCAATTAGC+TGG | + | chr3_4:50512802-50512821 | Msa0505150:CDS | 35.0% | |
| AAGGCCAGCTAATTGATTAT+TGG | - | chr3_4:50512809-50512828 | None:intergenic | 35.0% | |
| AACCCATTAGCATTAGACAT+TGG | - | chr3_4:50512963-50512982 | None:intergenic | 35.0% | |
| ATCAAAAAATCCTCTGCATG+AGG | - | chr3_4:50513032-50513051 | None:intergenic | 35.0% | |
| !! | TCGATGTGTCTATTTTTCTC+AGG | + | chr3_4:50513098-50513117 | Msa0505150:intron | 35.0% |
| CTAAAACTACTGAATGTCTC+TGG | - | chr3_4:50513363-50513382 | None:intergenic | 35.0% | |
| GAATGGTTTCAAACCAATCT+TGG | - | chr3_4:50513414-50513433 | None:intergenic | 35.0% | |
| ACCGTTTACTTTCAGAAGAA+TGG | - | chr3_4:50513431-50513450 | None:intergenic | 35.0% | |
| !!! | TTTGCATTTTTGGTACACTC+GGG | + | chr3_4:50513617-50513636 | Msa0505150:intron | 35.0% |
| GAAACTTCCTCGCATATTTA+TGG | + | chr3_4:50513649-50513668 | Msa0505150:intron | 35.0% | |
| ! | TTTTGGTCCATAAATATGCG+AGG | - | chr3_4:50513659-50513678 | None:intergenic | 35.0% |
| CTGAAGAGAAGTTGAGATAA+AGG | - | chr3_4:50513724-50513743 | None:intergenic | 35.0% | |
| GAATTTGTATGAGCAAGCAA+GGG | - | chr3_4:50513821-50513840 | None:intergenic | 35.0% | |
| TGAATTTGTATGAGCAAGCA+AGG | - | chr3_4:50513822-50513841 | None:intergenic | 35.0% | |
| ACAGTGATAGGGAAAATCAA+AGG | + | chr3_4:50513875-50513894 | Msa0505150:intron | 35.0% | |
| GCTTTGCATCTTAGTAACAA+TGG | + | chr3_4:50514088-50514107 | Msa0505150:CDS | 35.0% | |
| !!! | CTTGAATAGTTTTGATGGCA+GGG | - | chr3_4:50514122-50514141 | None:intergenic | 35.0% |
| !!! | TCTTGAATAGTTTTGATGGC+AGG | - | chr3_4:50514123-50514142 | None:intergenic | 35.0% |
| TTCTGTATTATGGAGATCCA+AGG | - | chr3_4:50514164-50514183 | None:intergenic | 35.0% | |
| GCATGACAGCAAAATATTTG+TGG | + | chr3_4:50514291-50514310 | Msa0505150:intron | 35.0% | |
| ! | GTGGTTTTCTTTCAGTTTGA+AGG | + | chr3_4:50514310-50514329 | Msa0505150:intron | 35.0% |
| ! | AATCTCTAGAAACTCCAACT+CGG | - | chr3_4:50514390-50514409 | None:intergenic | 35.0% |
| GAACTTCACGCTTATGGTTA+TGG | - | chr3_4:50509788-50509807 | None:intergenic | 40.0% | |
| GGCCAAAAACTCATCTTCAA+AGG | + | chr3_4:50509901-50509920 | Msa0505150:CDS | 40.0% | |
| TTTGGAAGATTCTGTGACAG+TGG | + | chr3_4:50510004-50510023 | Msa0505150:CDS | 40.0% | |
| AGTTATGCTTATGGCTTCTC+AGG | + | chr3_4:50510055-50510074 | Msa0505150:CDS | 40.0% | |
| GTTATGCTTATGGCTTCTCA+GGG | + | chr3_4:50510056-50510075 | Msa0505150:CDS | 40.0% | |
| GCTTCTCAGGGTTTATATCA+AGG | + | chr3_4:50510068-50510087 | Msa0505150:CDS | 40.0% | |
| ATCATACAACACATGGACAC+CGG | + | chr3_4:50510218-50510237 | Msa0505150:intron | 40.0% | |
| !!! | GTCGTATGGTTTTATGGTTG+AGG | + | chr3_4:50510565-50510584 | Msa0505150:intron | 40.0% |
| GGTTGAGGTAAATAATTGGG+GGG | + | chr3_4:50510580-50510599 | Msa0505150:intron | 40.0% | |
| TTTCACATGGGTAATGACCA+AGG | + | chr3_4:50510645-50510664 | Msa0505150:intron | 40.0% | |
| CATCATTACTAGAGCTTGAG+TGG | - | chr3_4:50510886-50510905 | None:intergenic | 40.0% | |
| !!! | CGTTCCAACCTGTTTTTTAC+CGG | - | chr3_4:50510920-50510939 | None:intergenic | 40.0% |
| ! | CGGTAAAAAACAGGTTGGAA+CGG | + | chr3_4:50510918-50510937 | Msa0505150:CDS | 40.0% |
| ! | TAAAAAACAGGTTGGAACGG+TGG | + | chr3_4:50510921-50510940 | Msa0505150:CDS | 40.0% |
| AGCATTGTCTGAATGCAACT+TGG | + | chr3_4:50510961-50510980 | Msa0505150:CDS | 40.0% | |
| ATTGTCTGAATGCAACTTGG+AGG | + | chr3_4:50510964-50510983 | Msa0505150:CDS | 40.0% | |
| TTCTCCGGTTTACATGTTAG+AGG | + | chr3_4:50511159-50511178 | Msa0505150:intron | 40.0% | |
| TATTCGAACGTTTAAAGGGG+TGG | + | chr3_4:50511297-50511316 | Msa0505150:intron | 40.0% | |
| !! | GGTTTAGAAGGTATCCGTAA+TGG | + | chr3_4:50511490-50511509 | Msa0505150:intron | 40.0% |
| GACATGTGTTAGGTTTCTTC+TGG | + | chr3_4:50511585-50511604 | Msa0505150:intron | 40.0% | |
| ! | ACAGCAGATGAGGTACTTTA+CGG | - | chr3_4:50511627-50511646 | None:intergenic | 40.0% |
| ! | TTTGAAGTCTGCATAGAGCT+TGG | + | chr3_4:50511708-50511727 | Msa0505150:intron | 40.0% |
| CAAGTAACACTGCTTATGAC+AGG | + | chr3_4:50511773-50511792 | Msa0505150:intron | 40.0% | |
| GAGAAAGCTGAAAGAACATG+AGG | + | chr3_4:50511829-50511848 | Msa0505150:intron | 40.0% | |
| AAATTCGCTCAAATGGCAAG+GGG | - | chr3_4:50511956-50511975 | None:intergenic | 40.0% | |
| CAAAATTCGCTCAAATGGCA+AGG | - | chr3_4:50511958-50511977 | None:intergenic | 40.0% | |
| !! | CTTGCCATTTGAGCGAATTT+TGG | + | chr3_4:50511956-50511975 | Msa0505150:intron | 40.0% |
| ! | CCCCCAATTTGAGCAAATTT+TGG | - | chr3_4:50512225-50512244 | None:intergenic | 40.0% |
| ! | AAATTTGCTCAAATTGGGGG+GGG | + | chr3_4:50512225-50512244 | Msa0505150:intron | 40.0% |
| TAAATAGGCCATACCTGATG+AGG | + | chr3_4:50512333-50512352 | Msa0505150:intron | 40.0% | |
| AATCCAAACCTCATCAGGTA+TGG | - | chr3_4:50512344-50512363 | None:intergenic | 40.0% | |
| GCAAGAGTTCTACATTGCAA+CGG | + | chr3_4:50512376-50512395 | Msa0505150:CDS | 40.0% | |
| AACTCTCAGAAAGCGACAAA+CGG | + | chr3_4:50512714-50512733 | Msa0505150:intron | 40.0% | |
| ! | TGTCATTCATCATTTTCCCC+AGG | + | chr3_4:50512932-50512951 | Msa0505150:intron | 40.0% |
| ATTAGACATTGGATAGGCCT+GGG | - | chr3_4:50512952-50512971 | None:intergenic | 40.0% | |
| AATTTCATCTCCTCATGCAG+AGG | + | chr3_4:50513019-50513038 | Msa0505150:intron | 40.0% | |
| ! | ACCACTAAGTGGTGTTCTTT+TGG | + | chr3_4:50513056-50513075 | Msa0505150:intron | 40.0% |
| ACCAAAAGAACACCACTTAG+TGG | - | chr3_4:50513060-50513079 | None:intergenic | 40.0% | |
| GAAATGCCATTCTCTTGTTG+AGG | + | chr3_4:50513147-50513166 | Msa0505150:CDS | 40.0% | |
| GGTTTCAAACCAATCTTGGA+AGG | - | chr3_4:50513410-50513429 | None:intergenic | 40.0% | |
| !!! | TTGCATTTTTGGTACACTCG+GGG | + | chr3_4:50513618-50513637 | Msa0505150:intron | 40.0% |
| TGTATTATGGAGATCCAAGG+TGG | - | chr3_4:50514161-50514180 | None:intergenic | 40.0% | |
| AACATTCCTTAACATGCCTC+TGG | + | chr3_4:50514480-50514499 | Msa0505150:three_prime_UTR | 40.0% | |
| ACCATAAGCGTGAAGTTCAG+TGG | + | chr3_4:50509790-50509809 | Msa0505150:CDS | 45.0% | |
| ACCACTGAACTTCACGCTTA+TGG | - | chr3_4:50509794-50509813 | None:intergenic | 45.0% | |
| TGCCACCAATGTTCTTCCAA+GGG | + | chr3_4:50509879-50509898 | Msa0505150:CDS | 45.0% | |
| !!! | AAGATGAGTTTTTGGCCCCT+TGG | - | chr3_4:50509898-50509917 | None:intergenic | 45.0% |
| AGTGCTTTACTACGTGTGCA+TGG | + | chr3_4:50510618-50510637 | Msa0505150:intron | 45.0% | |
| TGTGCATGGATCGTTTCACA+TGG | + | chr3_4:50510632-50510651 | Msa0505150:intron | 45.0% | |
| GTGCATGGATCGTTTCACAT+GGG | + | chr3_4:50510633-50510652 | Msa0505150:intron | 45.0% | |
| ! | TGACCAAGGCTAGTTAGAAG+TGG | + | chr3_4:50510659-50510678 | Msa0505150:intron | 45.0% |
| ! | GTACCACTTCTAACTAGCCT+TGG | - | chr3_4:50510665-50510684 | None:intergenic | 45.0% |
| TGGCTATCTTTCCTCGTTGT+TGG | - | chr3_4:50510866-50510885 | None:intergenic | 45.0% | |
| CAACTGGAAATTGGGAGATG+TGG | + | chr3_4:50511043-50511062 | Msa0505150:intron | 45.0% | |
| !!! | ATGCTTTTGGAGCGTTTCTC+CGG | + | chr3_4:50511144-50511163 | Msa0505150:intron | 45.0% |
| CAGCTTTCTCATGGGAATCA+AGG | - | chr3_4:50511819-50511838 | None:intergenic | 45.0% | |
| AATTCGCTCAAATGGCAAGG+GGG | - | chr3_4:50511955-50511974 | None:intergenic | 45.0% | |
| CCTGACATTTAGGCGAATTC+TGG | - | chr3_4:50512095-50512114 | None:intergenic | 45.0% | |
| CCAGAATTCGCCTAAATGTC+AGG | + | chr3_4:50512092-50512111 | Msa0505150:intron | 45.0% | |
| GAATTCGCCTAAATGTCAGG+AGG | + | chr3_4:50512095-50512114 | Msa0505150:intron | 45.0% | |
| ACTTTCGCCTCCTGACATTT+AGG | - | chr3_4:50512105-50512124 | None:intergenic | 45.0% | |
| !!! | GAGCAAATTTTGGTTTCCCC+CGG | - | chr3_4:50512215-50512234 | None:intergenic | 45.0% |
| ! | AATTTGCTCAAATTGGGGGG+GGG | + | chr3_4:50512226-50512245 | Msa0505150:intron | 45.0% |
| CCACAAATCCAAACCTCATC+AGG | - | chr3_4:50512349-50512368 | None:intergenic | 45.0% | |
| CCTGATGAGGTTTGGATTTG+TGG | + | chr3_4:50512346-50512365 | Msa0505150:CDS | 45.0% | |
| AACAACTTTGCCATCTGCGT+TGG | + | chr3_4:50512750-50512769 | Msa0505150:CDS | 45.0% | |
| ACAACTTTGCCATCTGCGTT+GGG | + | chr3_4:50512751-50512770 | Msa0505150:CDS | 45.0% | |
| TGGGATCGATAACCTCTTTG+AGG | + | chr3_4:50512770-50512789 | Msa0505150:CDS | 45.0% | |
| GGGATCGATAACCTCTTTGA+GGG | + | chr3_4:50512771-50512790 | Msa0505150:CDS | 45.0% | |
| ! | CTGGCCTTCCTGATGAAATA+GGG | + | chr3_4:50512821-50512840 | Msa0505150:CDS | 45.0% |
| GATGCCCTATTTCATCAGGA+AGG | - | chr3_4:50512828-50512847 | None:intergenic | 45.0% | |
| GTCAGATGCCCTATTTCATC+AGG | - | chr3_4:50512832-50512851 | None:intergenic | 45.0% | |
| TTAGACATTGGATAGGCCTG+GGG | - | chr3_4:50512951-50512970 | None:intergenic | 45.0% | |
| CATTAGACATTGGATAGGCC+TGG | - | chr3_4:50512953-50512972 | None:intergenic | 45.0% | |
| GCCATTCTCTTGTTGAGGTA+CGG | + | chr3_4:50513152-50513171 | Msa0505150:intron | 45.0% | |
| ACCGTACCTCAACAAGAGAA+TGG | - | chr3_4:50513156-50513175 | None:intergenic | 45.0% | |
| GTGTCTTTGACCAGTCACTT+TGG | + | chr3_4:50513552-50513571 | Msa0505150:intron | 45.0% | |
| ATTGCTTGCACCAAAGTGAC+TGG | - | chr3_4:50513565-50513584 | None:intergenic | 45.0% | |
| ! | GTTTCTGATGCTTTGAGCGA+CGG | - | chr3_4:50514357-50514376 | None:intergenic | 45.0% |
| !!! | TTTTTATATAAATTTTATAC+CGG | + | chr3_4:50511891-50511910 | Msa0505150:intron | 5.0% |
| ! | CTTGGAAGAACATTGGTGGC+AGG | - | chr3_4:50509880-50509899 | None:intergenic | 50.0% |
| CTGCCACCAATGTTCTTCCA+AGG | + | chr3_4:50509878-50509897 | Msa0505150:CDS | 50.0% | |
| GCCACCAATGTTCTTCCAAG+GGG | + | chr3_4:50509880-50509899 | Msa0505150:CDS | 50.0% | |
| TTGGCCCCTTGGAAGAACAT+TGG | - | chr3_4:50509887-50509906 | None:intergenic | 50.0% | |
| TCCTGTCTTGAAGAGAGCTC+AGG | + | chr3_4:50510835-50510854 | Msa0505150:CDS | 50.0% | |
| TTGGAACGGTGGAAAGCAAC+AGG | + | chr3_4:50510932-50510951 | Msa0505150:CDS | 50.0% | |
| TGGGAGATGTGGAACGCATT+AGG | + | chr3_4:50511054-50511073 | Msa0505150:intron | 50.0% | |
| CCGCGATTGGGATTCCATTA+CGG | - | chr3_4:50511507-50511526 | None:intergenic | 50.0% | |
| ! | CCGTAATGGAATCCCAATCG+CGG | + | chr3_4:50511504-50511523 | Msa0505150:intron | 50.0% |
| ! | CAAGTTGAGCACAGCAGATG+AGG | - | chr3_4:50511637-50511656 | None:intergenic | 50.0% |
| GAAGTCTGCATAGAGCTTGG+AGG | + | chr3_4:50511711-50511730 | Msa0505150:intron | 50.0% | |
| ATTCGCTCAAATGGCAAGGG+GGG | - | chr3_4:50511954-50511973 | None:intergenic | 50.0% | |
| ATTTGCTCAAATTGGGGGGG+GGG | + | chr3_4:50512227-50512246 | Msa0505150:intron | 50.0% | |
| AGGCCATACCTGATGAGGTT+TGG | + | chr3_4:50512338-50512357 | Msa0505150:intron | 50.0% | |
| ACCAGAACCGGTGAGTTACA+TGG | + | chr3_4:50512645-50512664 | Msa0505150:intron | 50.0% | |
| !! | ACCATGTAACTCACCGGTTC+TGG | - | chr3_4:50512649-50512668 | None:intergenic | 50.0% |
| GTTATCGATCCCAACGCAGA+TGG | - | chr3_4:50512763-50512782 | None:intergenic | 50.0% | |
| !! | GCTGGCCTTCCTGATGAAAT+AGG | + | chr3_4:50512820-50512839 | Msa0505150:CDS | 50.0% |
| TTGCTTGCAGCTTTCCACCT+TGG | + | chr3_4:50514144-50514163 | Msa0505150:CDS | 50.0% | |
| TCCTTAACATGCCTCTGGTG+TGG | + | chr3_4:50514485-50514504 | Msa0505150:three_prime_UTR | 50.0% | |
| ! | ACCACACCAGAGGCATGTTA+AGG | - | chr3_4:50514489-50514508 | None:intergenic | 50.0% |
| TTAACATGCCTCTGGTGTGG+TGG | + | chr3_4:50514488-50514507 | Msa0505150:three_prime_UTR | 50.0% | |
| GCCCCTTGGAAGAACATTGG+TGG | - | chr3_4:50509884-50509903 | None:intergenic | 55.0% | |
| GCCTGAGCTCTCTTCAAGAC+AGG | - | chr3_4:50510839-50510858 | None:intergenic | 55.0% | |
| CTCAGGCTGTTCCAACAACG+AGG | + | chr3_4:50510852-50510871 | Msa0505150:CDS | 55.0% | |
| TTTGCTCAAATTGGGGGGGG+GGG | + | chr3_4:50512228-50512247 | Msa0505150:intron | 55.0% | |
| GAGCAAAGGTGGCCGCGATT+GGG | - | chr3_4:50511519-50511538 | None:intergenic | 60.0% | |
| TGAGCAAAGGTGGCCGCGAT+TGG | - | chr3_4:50511520-50511539 | None:intergenic | 60.0% | |
| TTGCTCAAATTGGGGGGGGG+GGG | + | chr3_4:50512229-50512248 | Msa0505150:intron | 60.0% | |
| GACGTGCAGCTCCCTCAAAG+AGG | - | chr3_4:50512785-50512804 | None:intergenic | 60.0% | |
| CCAATCTGCCACCACACCAG+AGG | - | chr3_4:50514499-50514518 | None:intergenic | 60.0% | |
| CCTCTGGTGTGGTGGCAGAT+TGG | + | chr3_4:50514496-50514515 | Msa0505150:three_prime_UTR | 60.0% | |
| TGCTCAAATTGGGGGGGGGG+GGG | + | chr3_4:50512230-50512249 | Msa0505150:intron | 65.0% | |
| GCTCAAATTGGGGGGGGGGG+GGG | + | chr3_4:50512231-50512250 | Msa0505150:intron | 70.0% | |
| CTCAAATTGGGGGGGGGGGG+GGG | + | chr3_4:50512232-50512251 | Msa0505150:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 50509670 | 50514656 | 50509670 | ID=Msa0505150;Name=Msa0505150 |
| chr3_4 | mRNA | 50509670 | 50514656 | 50509670 | ID=Msa0505150-mRNA-1;Parent=Msa0505150;Name=Msa0505150-mRNA-1;_AED=0.12;_eAED=0.13;_QI=0|0.88|0.8|1|1|1|10|221|407 |
| chr3_4 | exon | 50509670 | 50509922 | 50509670 | ID=Msa0505150-mRNA-1:exon:10899;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50509997 | 50510091 | 50509997 | ID=Msa0505150-mRNA-1:exon:10900;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50510830 | 50510985 | 50510830 | ID=Msa0505150-mRNA-1:exon:10901;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50512340 | 50512450 | 50512340 | ID=Msa0505150-mRNA-1:exon:10902;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50512554 | 50512654 | 50512554 | ID=Msa0505150-mRNA-1:exon:10903;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50512723 | 50512884 | 50512723 | ID=Msa0505150-mRNA-1:exon:10904;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50513120 | 50513168 | 50513120 | ID=Msa0505150-mRNA-1:exon:10905;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50513327 | 50513392 | 50513327 | ID=Msa0505150-mRNA-1:exon:10906;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50514088 | 50514207 | 50514088 | ID=Msa0505150-mRNA-1:exon:10907;Parent=Msa0505150-mRNA-1 |
| chr3_4 | exon | 50514325 | 50514656 | 50514325 | ID=Msa0505150-mRNA-1:exon:10908;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50509670 | 50509922 | 50509670 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50509997 | 50510091 | 50509997 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50510830 | 50510985 | 50510830 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50512340 | 50512450 | 50512340 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50512554 | 50512654 | 50512554 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50512723 | 50512884 | 50512723 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50513120 | 50513168 | 50513120 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50513327 | 50513392 | 50513327 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50514088 | 50514207 | 50514088 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | CDS | 50514325 | 50514435 | 50514325 | ID=Msa0505150-mRNA-1:cds;Parent=Msa0505150-mRNA-1 |
| chr3_4 | three_prime_UTR | 50514436 | 50514656 | 50514436 | ID=Msa0505150-mRNA-1:three_prime_utr;Parent=Msa0505150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
