Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525340 | RHN70765.1 | 93.639 | 393 | 25 | 0 | 1 | 393 | 1 | 393 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525340 | sp|Q9SJA7|SOX_ARATH | 61.538 | 390 | 145 | 2 | 8 | 392 | 9 | 398 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525340 | A0A396J2Y3 | 93.639 | 393 | 25 | 0 | 1 | 393 | 1 | 393 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0525340 | -0.817995 | 2.469576e-52 | -8.615850e-47 |
| Msa0001950 | Msa0525340 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0002540 | Msa0525340 | 0.806250 | 9.010823e-50 | -8.615850e-47 |
| Msa0016670 | Msa0525340 | 0.830385 | 3.026226e-55 | -8.615850e-47 |
| Msa0029540 | Msa0525340 | -0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0030310 | Msa0525340 | 0.831456 | 1.651916e-55 | -8.615850e-47 |
| Msa0032260 | Msa0525340 | 0.812239 | 4.684786e-51 | -8.615850e-47 |
| Msa0032370 | Msa0525340 | 0.811835 | 5.739799e-51 | -8.615850e-47 |
| Msa0032840 | Msa0525340 | -0.830962 | 2.185286e-55 | -8.615850e-47 |
| Msa0041620 | Msa0525340 | 0.853228 | 2.745164e-61 | -8.615850e-47 |
| Msa0044020 | Msa0525340 | 0.801876 | 7.321052e-49 | -8.615850e-47 |
| Msa0052610 | Msa0525340 | 0.831713 | 1.428448e-55 | -8.615850e-47 |
| Msa0057710 | Msa0525340 | 0.810275 | 1.249790e-50 | -8.615850e-47 |
| Msa0067870 | Msa0525340 | 0.806115 | 9.619048e-50 | -8.615850e-47 |
| Msa0068760 | Msa0525340 | 0.803376 | 3.590275e-49 | -8.615850e-47 |
| Msa0073670 | Msa0525340 | 0.837755 | 4.311208e-57 | -8.615850e-47 |
| Msa0074320 | Msa0525340 | 0.811481 | 6.853618e-51 | -8.615850e-47 |
| Msa0077200 | Msa0525340 | 0.800891 | 1.164894e-48 | -8.615850e-47 |
| Msa0078000 | Msa0525340 | -0.806739 | 7.106930e-50 | -8.615850e-47 |
| Msa0092740 | Msa0525340 | -0.801982 | 6.963560e-49 | -8.615850e-47 |
| Msa0094950 | Msa0525340 | 0.823885 | 1.088668e-53 | -8.615850e-47 |
| Msa0095380 | Msa0525340 | 0.839903 | 1.199050e-57 | -8.615850e-47 |
| Msa0096670 | Msa0525340 | 0.807762 | 4.314092e-50 | -8.615850e-47 |
| Msa0097850 | Msa0525340 | 0.815005 | 1.153873e-51 | -8.615850e-47 |
| Msa0099190 | Msa0525340 | 0.809163 | 2.167043e-50 | -8.615850e-47 |
| Msa0100800 | Msa0525340 | 0.816368 | 5.734575e-52 | -8.615850e-47 |
| Msa0111330 | Msa0525340 | 0.817578 | 3.067101e-52 | -8.615850e-47 |
| Msa0114540 | Msa0525340 | -0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0124340 | Msa0525340 | 0.804356 | 2.246686e-49 | -8.615850e-47 |
| Msa0124990 | Msa0525340 | 0.809016 | 2.330391e-50 | -8.615850e-47 |
| Msa0127310 | Msa0525340 | 0.805743 | 1.152148e-49 | -8.615850e-47 |
| Msa0128860 | Msa0525340 | 0.803985 | 2.684443e-49 | -8.615850e-47 |
| Msa0137610 | Msa0525340 | -0.812665 | 3.782449e-51 | -8.615850e-47 |
| Msa0138970 | Msa0525340 | -0.821238 | 4.490826e-53 | -8.615850e-47 |
| Msa0143080 | Msa0525340 | 0.801989 | 6.939941e-49 | -8.615850e-47 |
| Msa0143240 | Msa0525340 | -0.815607 | 8.478841e-52 | -8.615850e-47 |
| Msa0145950 | Msa0525340 | 0.828447 | 8.945946e-55 | -8.615850e-47 |
| Msa0152840 | Msa0525340 | 0.805117 | 1.558643e-49 | -8.615850e-47 |
| Msa0156650 | Msa0525340 | -0.808337 | 3.254413e-50 | -8.615850e-47 |
| Msa0162770 | Msa0525340 | -0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0167480 | Msa0525340 | 0.834997 | 2.167840e-56 | -8.615850e-47 |
| Msa0168640 | Msa0525340 | -0.816885 | 4.390580e-52 | -8.615850e-47 |
| Msa0172350 | Msa0525340 | 0.825176 | 5.406443e-54 | -8.615850e-47 |
| Msa0174730 | Msa0525340 | 0.800540 | 1.373984e-48 | -8.615850e-47 |
| Msa0182280 | Msa0525340 | 0.804036 | 2.619681e-49 | -8.615850e-47 |
| Msa0183620 | Msa0525340 | 0.803648 | 3.153179e-49 | -8.615850e-47 |
| Msa0183830 | Msa0525340 | 0.811755 | 5.973985e-51 | -8.615850e-47 |
| Msa0186890 | Msa0525340 | 0.837944 | 3.853987e-57 | -8.615850e-47 |
| Msa0187690 | Msa0525340 | 0.807925 | 3.983197e-50 | -8.615850e-47 |
| Msa0187930 | Msa0525340 | 0.810252 | 1.264133e-50 | -8.615850e-47 |
| Msa0194540 | Msa0525340 | 0.821672 | 3.565062e-53 | -8.615850e-47 |
| Msa0194970 | Msa0525340 | 0.813803 | 2.127244e-51 | -8.615850e-47 |
| Msa0197780 | Msa0525340 | 0.804292 | 2.317007e-49 | -8.615850e-47 |
| Msa0199690 | Msa0525340 | 0.807352 | 5.271813e-50 | -8.615850e-47 |
| Msa0219250 | Msa0525340 | -0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0222920 | Msa0525340 | 0.834656 | 2.642099e-56 | -8.615850e-47 |
| Msa0226470 | Msa0525340 | 0.820792 | 5.687937e-53 | -8.615850e-47 |
| Msa0227400 | Msa0525340 | 0.831052 | 2.077070e-55 | -8.615850e-47 |
| Msa0230550 | Msa0525340 | -0.824545 | 7.616610e-54 | -8.615850e-47 |
| Msa0231880 | Msa0525340 | 0.828758 | 7.524154e-55 | -8.615850e-47 |
| Msa0236980 | Msa0525340 | 0.823128 | 1.636555e-53 | -8.615850e-47 |
| Msa0370160 | Msa0525340 | -0.824859 | 6.424761e-54 | -8.615850e-47 |
| Msa0374250 | Msa0525340 | 0.803626 | 3.185961e-49 | -8.615850e-47 |
| Msa0376040 | Msa0525340 | 0.808312 | 3.294909e-50 | -8.615850e-47 |
| Msa0383310 | Msa0525340 | 0.902398 | 1.009461e-78 | -8.615850e-47 |
| Msa0392940 | Msa0525340 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0394400 | Msa0525340 | 0.814882 | 1.228585e-51 | -8.615850e-47 |
| Msa0402330 | Msa0525340 | 0.831932 | 1.261207e-55 | -8.615850e-47 |
| Msa0413450 | Msa0525340 | 0.817457 | 3.264424e-52 | -8.615850e-47 |
| Msa0416400 | Msa0525340 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
| Msa0420000 | Msa0525340 | 0.817060 | 4.010401e-52 | -8.615850e-47 |
| Msa0422830 | Msa0525340 | 0.800054 | 1.725066e-48 | -8.615850e-47 |
| Msa0422910 | Msa0525340 | 0.810399 | 1.175056e-50 | -8.615850e-47 |
| Msa0425940 | Msa0525340 | 0.812041 | 5.175093e-51 | -8.615850e-47 |
| Msa0426160 | Msa0525340 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
| Msa0429210 | Msa0525340 | 0.805909 | 1.063065e-49 | -8.615850e-47 |
| Msa0431770 | Msa0525340 | 0.818939 | 1.508290e-52 | -8.615850e-47 |
| Msa0436200 | Msa0525340 | 0.828233 | 1.007567e-54 | -8.615850e-47 |
| Msa0436280 | Msa0525340 | -0.836480 | 9.131905e-57 | -8.615850e-47 |
| Msa0437690 | Msa0525340 | -0.837209 | 5.949460e-57 | -8.615850e-47 |
| Msa0441800 | Msa0525340 | 0.800836 | 1.195448e-48 | -8.615850e-47 |
| Msa0463500 | Msa0525340 | 0.831696 | 1.441927e-55 | -8.615850e-47 |
| Msa0469790 | Msa0525340 | 0.808729 | 2.684673e-50 | -8.615850e-47 |
| Msa0469910 | Msa0525340 | -0.845567 | 3.747916e-59 | -8.615850e-47 |
| Msa0471590 | Msa0525340 | 0.802517 | 5.403274e-49 | -8.615850e-47 |
| Msa0472380 | Msa0525340 | 0.801561 | 8.495300e-49 | -8.615850e-47 |
| Msa0477180 | Msa0525340 | 0.871772 | 5.296272e-67 | -8.615850e-47 |
| Msa0480320 | Msa0525340 | 0.801910 | 7.204096e-49 | -8.615850e-47 |
| Msa0242680 | Msa0525340 | 0.813962 | 1.962646e-51 | -8.615850e-47 |
| Msa0244780 | Msa0525340 | 0.807609 | 4.649631e-50 | -8.615850e-47 |
| Msa0246690 | Msa0525340 | 0.804092 | 2.550301e-49 | -8.615850e-47 |
| Msa0259560 | Msa0525340 | 0.800527 | 1.382130e-48 | -8.615850e-47 |
| Msa0260240 | Msa0525340 | 0.820496 | 6.652374e-53 | -8.615850e-47 |
| Msa0260280 | Msa0525340 | 0.822590 | 2.183295e-53 | -8.615850e-47 |
| Msa0262310 | Msa0525340 | 0.807169 | 5.763965e-50 | -8.615850e-47 |
| Msa0262480 | Msa0525340 | 0.818124 | 2.308313e-52 | -8.615850e-47 |
| Msa0264570 | Msa0525340 | 0.807327 | 5.336054e-50 | -8.615850e-47 |
| Msa0267760 | Msa0525340 | 0.821179 | 4.634175e-53 | -8.615850e-47 |
| Msa0268130 | Msa0525340 | 0.809873 | 1.525809e-50 | -8.615850e-47 |
| Msa0275030 | Msa0525340 | 0.824093 | 9.728029e-54 | -8.615850e-47 |
| Msa0275400 | Msa0525340 | -0.827451 | 1.553580e-54 | -8.615850e-47 |
| Msa0280430 | Msa0525340 | 0.804317 | 2.289373e-49 | -8.615850e-47 |
| Msa0280900 | Msa0525340 | 0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa0291520 | Msa0525340 | 0.811384 | 7.193503e-51 | -8.615850e-47 |
| Msa0298990 | Msa0525340 | 0.804538 | 2.058721e-49 | -8.615850e-47 |
| Msa0300350 | Msa0525340 | 0.822694 | 2.065804e-53 | -8.615850e-47 |
| Msa0304260 | Msa0525340 | 0.811852 | 5.689500e-51 | -8.615850e-47 |
| Msa0304300 | Msa0525340 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0304590 | Msa0525340 | 0.802489 | 5.474802e-49 | -8.615850e-47 |
| Msa0304660 | Msa0525340 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0317310 | Msa0525340 | 0.820286 | 7.431477e-53 | -8.615850e-47 |
| Msa0320100 | Msa0525340 | 0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa0328210 | Msa0525340 | 0.819945 | 8.895390e-53 | -8.615850e-47 |
| Msa0331700 | Msa0525340 | 0.807050 | 6.108106e-50 | -8.615850e-47 |
| Msa0337650 | Msa0525340 | 0.823967 | 1.041158e-53 | -8.615850e-47 |
| Msa0347680 | Msa0525340 | 0.809396 | 1.931388e-50 | -8.615850e-47 |
| Msa0355270 | Msa0525340 | 0.840019 | 1.118836e-57 | -8.615850e-47 |
| Msa0360990 | Msa0525340 | 0.808661 | 2.774954e-50 | -8.615850e-47 |
| Msa0484290 | Msa0525340 | 0.804428 | 2.170818e-49 | -8.615850e-47 |
| Msa0505150 | Msa0525340 | 0.817211 | 3.708911e-52 | -8.615850e-47 |
| Msa0508590 | Msa0525340 | 0.820092 | 8.234711e-53 | -8.615850e-47 |
| Msa0508630 | Msa0525340 | 0.809972 | 1.452764e-50 | -8.615850e-47 |
| Msa0509950 | Msa0525340 | -0.832171 | 1.100642e-55 | -8.615850e-47 |
| Msa0516040 | Msa0525340 | 0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0520320 | Msa0525340 | 0.804701 | 1.903772e-49 | -8.615850e-47 |
| Msa0521880 | Msa0525340 | 0.807122 | 5.896442e-50 | -8.615850e-47 |
| Msa0524590 | Msa0525340 | 0.808394 | 3.165085e-50 | -8.615850e-47 |
| Msa0525340 | Msa0526540 | 0.833962 | 3.944968e-56 | -8.615850e-47 |
| Msa0525340 | Msa0526710 | 0.815827 | 7.572109e-52 | -8.615850e-47 |
| Msa0525340 | Msa0532330 | 0.804554 | 2.042978e-49 | -8.615850e-47 |
| Msa0525340 | Msa0535030 | 0.809051 | 2.290129e-50 | -8.615850e-47 |
| Msa0525340 | Msa0535060 | 0.803269 | 3.778775e-49 | -8.615850e-47 |
| Msa0525340 | Msa0541860 | 0.838735 | 2.410710e-57 | -8.615850e-47 |
| Msa0525340 | Msa0542160 | 0.814537 | 1.464487e-51 | -8.615850e-47 |
| Msa0525340 | Msa0560470 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
| Msa0525340 | Msa0568820 | 0.816464 | 5.457327e-52 | -8.615850e-47 |
| Msa0525340 | Msa0576690 | 0.820278 | 7.463631e-53 | -8.615850e-47 |
| Msa0525340 | Msa0576940 | 0.835575 | 1.548995e-56 | -8.615850e-47 |
| Msa0525340 | Msa0578090 | 0.810872 | 9.285934e-51 | -8.615850e-47 |
| Msa0525340 | Msa0579290 | 0.805882 | 1.077267e-49 | -8.615850e-47 |
| Msa0525340 | Msa0581070 | 0.823562 | 1.295413e-53 | -8.615850e-47 |
| Msa0525340 | Msa0586850 | 0.800018 | 1.754813e-48 | -8.615850e-47 |
| Msa0525340 | Msa0590680 | 0.814910 | 1.210783e-51 | -8.615850e-47 |
| Msa0525340 | Msa0591060 | 0.842262 | 2.879758e-58 | -8.615850e-47 |
| Msa0525340 | Msa0591770 | 0.835466 | 1.651020e-56 | -8.615850e-47 |
| Msa0525340 | Msa0610390 | 0.803993 | 2.674252e-49 | -8.615850e-47 |
| Msa0525340 | Msa0616340 | 0.806570 | 7.714645e-50 | -8.615850e-47 |
| Msa0525340 | Msa0618010 | 0.809758 | 1.614907e-50 | -8.615850e-47 |
| Msa0525340 | Msa0619070 | 0.823305 | 1.487734e-53 | -8.615850e-47 |
| Msa0525340 | Msa0620990 | 0.834254 | 3.332612e-56 | -8.615850e-47 |
| Msa0525340 | Msa0623700 | 0.824905 | 6.264156e-54 | -8.615850e-47 |
| Msa0525340 | Msa0639120 | 0.822056 | 2.904572e-53 | -8.615850e-47 |
| Msa0525340 | Msa0647380 | 0.835392 | 1.723052e-56 | -8.615850e-47 |
| Msa0525340 | Msa0650920 | 0.804854 | 1.768694e-49 | -8.615850e-47 |
| Msa0525340 | Msa0654870 | 0.815617 | 8.434718e-52 | -8.615850e-47 |
| Msa0525340 | Msa0663900 | 0.809544 | 1.795524e-50 | -8.615850e-47 |
| Msa0525340 | Msa0664760 | 0.802276 | 6.057485e-49 | -8.615850e-47 |
| Msa0525340 | Msa0664960 | 0.814019 | 1.906965e-51 | -8.615850e-47 |
| Msa0525340 | Msa0669850 | 0.834085 | 3.674322e-56 | -8.615850e-47 |
| Msa0525340 | Msa0670270 | 0.806159 | 9.420438e-50 | -8.615850e-47 |
| Msa0525340 | Msa0670980 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
| Msa0525340 | Msa0677290 | 0.824017 | 1.013426e-53 | -8.615850e-47 |
| Msa0525340 | Msa0678860 | 0.800459 | 1.427351e-48 | -8.615850e-47 |
| Msa0525340 | Msa0680240 | 0.820383 | 7.062897e-53 | -8.615850e-47 |
| Msa0525340 | Msa0684500 | 0.808714 | 2.703862e-50 | -8.615850e-47 |
| Msa0525340 | Msa0687630 | 0.840170 | 1.021727e-57 | -8.615850e-47 |
| Msa0525340 | Msa0690250 | 0.824907 | 6.259320e-54 | -8.615850e-47 |
| Msa0525340 | Msa0692080 | 0.819551 | 1.094588e-52 | -8.615850e-47 |
| Msa0525340 | Msa0701280 | 0.810847 | 9.402754e-51 | -8.615850e-47 |
| Msa0525340 | Msa0703230 | 0.836496 | 9.043884e-57 | -8.615850e-47 |
| Msa0525340 | Msa0705040 | 0.806639 | 7.459236e-50 | -8.615850e-47 |
| Msa0525340 | Msa0707390 | 0.848315 | 6.629444e-60 | -8.615850e-47 |
| Msa0525340 | Msa0711490 | 0.803222 | 3.863389e-49 | -8.615850e-47 |
| Msa0525340 | Msa0712310 | 0.819121 | 1.371334e-52 | -8.615850e-47 |
| Msa0525340 | Msa0715010 | -0.802119 | 6.525399e-49 | -8.615850e-47 |
| Msa0525340 | Msa0718740 | 0.813556 | 2.411687e-51 | -8.615850e-47 |
| Msa0525340 | Msa0735310 | 0.801798 | 7.598076e-49 | -8.615850e-47 |
| Msa0525340 | Msa0743680 | 0.825808 | 3.830147e-54 | -8.615850e-47 |
| Msa0525340 | Msa0750920 | 0.844109 | 9.263408e-59 | -8.615850e-47 |
| Msa0525340 | Msa0752620 | 0.802281 | 6.045105e-49 | -8.615850e-47 |
| Msa0525340 | Msa0754720 | -0.806668 | 7.354923e-50 | -8.615850e-47 |
| Msa0525340 | Msa0755340 | 0.840756 | 7.179578e-58 | -8.615850e-47 |
| Msa0525340 | Msa0761580 | 0.806823 | 6.821896e-50 | -8.615850e-47 |
| Msa0525340 | Msa0778320 | 0.807799 | 4.236383e-50 | -8.615850e-47 |
| Msa0525340 | Msa0784620 | 0.804800 | 1.815718e-49 | -8.615850e-47 |
| Msa0525340 | Msa0795010 | 0.814296 | 1.656347e-51 | -8.615850e-47 |
| Msa0525340 | Msa0795030 | 0.824194 | 9.213200e-54 | -8.615850e-47 |
| Msa0525340 | Msa0813720 | 0.828514 | 8.617973e-55 | -8.615850e-47 |
| Msa0525340 | Msa0814250 | 0.812354 | 4.421489e-51 | -8.615850e-47 |
| Msa0525340 | Msa0814320 | 0.806086 | 9.758375e-50 | -8.615850e-47 |
| Msa0525340 | Msa0824730 | 0.808175 | 3.524523e-50 | -8.615850e-47 |
| Msa0525340 | Msa0830990 | 0.821801 | 3.329114e-53 | -8.615850e-47 |
| Msa0525340 | Msa0836130 | 0.818496 | 1.901432e-52 | -8.615850e-47 |
| Msa0525340 | Msa0845750 | 0.816638 | 4.988909e-52 | -8.615850e-47 |
| Msa0525340 | Msa0850960 | 0.841965 | 3.450076e-58 | -8.615850e-47 |
| Msa0525340 | Msa0863800 | 0.817674 | 2.918127e-52 | -8.615850e-47 |
| Msa0525340 | Msa0864010 | 0.809700 | 1.662348e-50 | -8.615850e-47 |
| Msa0525340 | Msa0883030 | 0.800959 | 1.128476e-48 | -8.615850e-47 |
| Msa0525340 | Msa0903330 | 0.818942 | 1.506312e-52 | -8.615850e-47 |
| Msa0525340 | Msa0930780 | 0.822525 | 2.261198e-53 | -8.615850e-47 |
| Msa0525340 | Msa0937670 | 0.816058 | 6.725779e-52 | -8.615850e-47 |
| Msa0525340 | Msa0947530 | -0.837507 | 4.989340e-57 | -8.615850e-47 |
| Msa0525340 | Msa0957450 | -0.818299 | 2.107072e-52 | -8.615850e-47 |
| Msa0525340 | Msa0960830 | 0.800064 | 1.717469e-48 | -8.615850e-47 |
| Msa0525340 | Msa0966720 | -0.816030 | 6.822893e-52 | -8.615850e-47 |
| Msa0525340 | Msa0970420 | 0.812624 | 3.859673e-51 | -8.615850e-47 |
| Msa0525340 | Msa0974810 | 0.812994 | 3.202973e-51 | -8.615850e-47 |
| Msa0525340 | Msa0976330 | 0.812067 | 5.107160e-51 | -8.615850e-47 |
| Msa0525340 | Msa0985550 | 0.814403 | 1.568601e-51 | -8.615850e-47 |
| Msa0525340 | Msa1000940 | 0.815690 | 8.123390e-52 | -8.615850e-47 |
| Msa0525340 | Msa1001580 | 0.800032 | 1.742965e-48 | -8.615850e-47 |
| Msa0525340 | Msa1004420 | 0.805167 | 1.521476e-49 | -8.615850e-47 |
| Msa0525340 | Msa1008060 | -0.825796 | 3.856136e-54 | -8.615850e-47 |
| Msa0525340 | Msa1019240 | 0.827065 | 1.921554e-54 | -8.615850e-47 |
| Msa0525340 | Msa1019260 | 0.823878 | 1.092900e-53 | -8.615850e-47 |
| Msa0525340 | Msa1022970 | 0.809876 | 1.523344e-50 | -8.615850e-47 |
| Msa0525340 | Msa1028470 | -0.802704 | 4.945509e-49 | -8.615850e-47 |
| Msa0525340 | Msa1044340 | 0.809322 | 2.004141e-50 | -8.615850e-47 |
| Msa0525340 | Msa1049510 | -0.810925 | 9.043591e-51 | -8.615850e-47 |
| Msa0525340 | Msa1054240 | 0.814258 | 1.688002e-51 | -8.615850e-47 |
| Msa0525340 | Msa1061720 | 0.808551 | 2.929814e-50 | -8.615850e-47 |
| Msa0525340 | Msa1067440 | -0.820206 | 7.751765e-53 | -8.615850e-47 |
| Msa0525340 | Msa1069660 | -0.824381 | 8.323158e-54 | -8.615850e-47 |
| Msa0525340 | Msa1079370 | -0.801521 | 8.658460e-49 | -8.615850e-47 |
| Msa0525340 | Msa1082700 | 0.842674 | 2.238997e-58 | -8.615850e-47 |
| Msa0525340 | Msa1084470 | 0.806699 | 7.246715e-50 | -8.615850e-47 |
| Msa0525340 | Msa1087810 | 0.805600 | 1.234670e-49 | -8.615850e-47 |
| Msa0525340 | Msa1094420 | 0.808538 | 2.948181e-50 | -8.615850e-47 |
| Msa0525340 | Msa1098720 | -0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa0525340 | Msa1101580 | 0.806172 | 9.358965e-50 | -8.615850e-47 |
| Msa0525340 | Msa1104140 | 0.806743 | 7.093881e-50 | -8.615850e-47 |
| Msa0525340 | Msa1104210 | 0.813804 | 2.125885e-51 | -8.615850e-47 |
| Msa0525340 | Msa1122820 | 0.811990 | 5.310948e-51 | -8.615850e-47 |
| Msa0525340 | Msa1126120 | -0.835053 | 2.099221e-56 | -8.615850e-47 |
| Msa0525340 | Msa1126510 | 0.815248 | 1.018685e-51 | -8.615850e-47 |
| Msa0525340 | Msa1126770 | 0.823086 | 1.673505e-53 | -8.615850e-47 |
| Msa0525340 | Msa1139810 | 0.807411 | 5.121659e-50 | -8.615850e-47 |
| Msa0525340 | Msa1166010 | 0.841575 | 4.371654e-58 | -8.615850e-47 |
| Msa0525340 | Msa1166860 | 0.804708 | 1.897430e-49 | -8.615850e-47 |
| Msa0525340 | Msa1166870 | 0.833856 | 4.193395e-56 | -8.615850e-47 |
| Msa0525340 | Msa1171770 | -0.820626 | 6.211428e-53 | -8.615850e-47 |
| Msa0525340 | Msa1184370 | 0.802260 | 6.104646e-49 | -8.615850e-47 |
| Msa0525340 | Msa1193950 | -0.820139 | 8.031101e-53 | -8.615850e-47 |
| Msa0525340 | Msa1201830 | 0.816593 | 5.104440e-52 | -8.615850e-47 |
| Msa0525340 | Msa1208890 | -0.809236 | 2.090314e-50 | -8.615850e-47 |
| Msa0525340 | Msa1217860 | 0.825294 | 5.068939e-54 | -8.615850e-47 |
| Msa0525340 | Msa1226620 | 0.818087 | 2.353090e-52 | -8.615850e-47 |
| Msa0525340 | Msa1227690 | 0.824259 | 8.892189e-54 | -8.615850e-47 |
| Msa0525340 | Msa1237030 | 0.830301 | 3.172056e-55 | -8.615850e-47 |
| Msa0525340 | Msa1246530 | -0.816124 | 6.499367e-52 | -8.615850e-47 |
| Msa0525340 | Msa1252190 | 0.808292 | 3.326739e-50 | -8.615850e-47 |
| Msa0525340 | Msa1254710 | 0.830317 | 3.144140e-55 | -8.615850e-47 |
| Msa0525340 | Msa1269580 | -0.837704 | 4.442702e-57 | -8.615850e-47 |
| Msa0525340 | Msa1274280 | 0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0525340 | Msa1281190 | 0.826980 | 2.014359e-54 | -8.615850e-47 |
| Msa0525340 | Msa1284520 | 0.800383 | 1.478690e-48 | -8.615850e-47 |
| Msa0525340 | Msa1292830 | 0.803105 | 4.085075e-49 | -8.615850e-47 |
| Msa0525340 | Msa1294840 | 0.801161 | 1.026114e-48 | -8.615850e-47 |
| Msa0525340 | Msa1294960 | 0.802752 | 4.832267e-49 | -8.615850e-47 |
| Msa0525340 | Msa1310690 | 0.802641 | 5.095703e-49 | -8.615850e-47 |
| Msa0525340 | Msa1316830 | 0.815565 | 8.662503e-52 | -8.615850e-47 |
| Msa0525340 | Msa1335940 | 0.824919 | 6.216649e-54 | -8.615850e-47 |
| Msa0525340 | Msa1341070 | 0.834448 | 2.979663e-56 | -8.615850e-47 |
| Msa0525340 | Msa1343070 | 0.803606 | 3.217538e-49 | -8.615850e-47 |
| Msa0525340 | Msa1362510 | 0.804393 | 2.207598e-49 | -8.615850e-47 |
| Msa0525340 | Msa1363330 | 0.829362 | 5.369658e-55 | -8.615850e-47 |
| Msa0525340 | Msa1365150 | 0.841563 | 4.404365e-58 | -8.615850e-47 |
| Msa0525340 | Msa1365200 | 0.803539 | 3.321875e-49 | -8.615850e-47 |
| Msa0525340 | Msa1367880 | 0.824538 | 7.647807e-54 | -8.615850e-47 |
| Msa0525340 | Msa1373510 | 0.819574 | 1.081352e-52 | -8.615850e-47 |
| Msa0525340 | Msa1379570 | 0.807153 | 5.808229e-50 | -8.615850e-47 |
| Msa0525340 | Msa1379760 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
| Msa0525340 | Msa1382310 | 0.831820 | 1.344178e-55 | -8.615850e-47 |
| Msa0525340 | Msa1386600 | 0.828568 | 8.364288e-55 | -8.615850e-47 |
| Msa0525340 | Msa1390310 | 0.819385 | 1.194125e-52 | -8.615850e-47 |
| Msa0525340 | Msa1397810 | 0.825170 | 5.425005e-54 | -8.615850e-47 |
| Msa0525340 | Msa1397940 | 0.808492 | 3.016365e-50 | -8.615850e-47 |
| Msa0525340 | Msa1400610 | -0.802801 | 4.722722e-49 | -8.615850e-47 |
| Msa0525340 | Msa1403930 | -0.809624 | 1.725679e-50 | -8.615850e-47 |
| Msa0525340 | Msa1404190 | 0.820901 | 5.367619e-53 | -8.615850e-47 |
| Msa0525340 | Msa1406040 | 0.846330 | 2.324128e-59 | -8.615850e-47 |
| Msa0525340 | Msa1429360 | -0.832876 | 7.358574e-56 | -8.615850e-47 |
| Msa0525340 | Msa1438640 | 0.849579 | 2.954478e-60 | -8.615850e-47 |
| Msa0525340 | Msa1439960 | 0.837428 | 5.228489e-57 | -8.615850e-47 |
| Msa0525340 | Msa1442220 | -0.831068 | 2.058447e-55 | -8.615850e-47 |
| Msa0525340 | Msa1442850 | 0.819166 | 1.339394e-52 | -8.615850e-47 |
| Msa0525340 | Msa1448690 | 0.800307 | 1.532184e-48 | -8.615850e-47 |
| Msa0525340 | Msa1450280 | 0.801479 | 8.829941e-49 | -8.615850e-47 |
| Msa0525340 | Msa1461490 | 0.848165 | 7.293709e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525340 | MtrunA17_Chr3g0139051 | 93.639 | 393 | 25 | 0 | 1 | 393 | 1 | 393 | 0.0 | 769 |
| Msa0525340 | MtrunA17_Chr3g0139041 | 75.515 | 388 | 94 | 1 | 6 | 393 | 4 | 390 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525340 | AT2G24580.1 | 61.538 | 390 | 145 | 2 | 8 | 392 | 9 | 398 | 0.0 | 513 |
Find 151 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGAAATCCTACCAATTA+TGG | 0.163765 | 3_4:-78880319 | Msa0525340:CDS |
| GATTGTTCTGGCGGCAGTTT+TGG | 0.168120 | 3_4:+78880201 | None:intergenic |
| GGATTCACATTCCAGATAAT+TGG | 0.173596 | 3_4:-78880127 | Msa0525340:CDS |
| TTAACACAGCACCGTGATTA+TGG | 0.201891 | 3_4:+78880033 | None:intergenic |
| TAGCTGGTCCTAGTTTATTT+TGG | 0.209684 | 3_4:+78875526 | None:intergenic |
| TTCAAGATGGCTCCTGTTAT+TGG | 0.214331 | 3_4:-78879459 | Msa0525340:CDS |
| CTTGAGCTTCTTCCCATAAT+TGG | 0.224881 | 3_4:+78880306 | None:intergenic |
| TGCCTTGTAATTTAAACTTT+TGG | 0.240158 | 3_4:-78875370 | Msa0525340:three_prime_UTR |
| TGGTTATATTTGCAGGAATT+TGG | 0.266914 | 3_4:-78875716 | Msa0525340:intron |
| CAAAGTGACTTCTAAGGTTT+AGG | 0.271926 | 3_4:-78879361 | Msa0525340:intron |
| GATAAGTGGGGTTGAAATTC+CGG | 0.295732 | 3_4:-78879877 | Msa0525340:CDS |
| GATTTCTTGGGTGGTGAGTT+TGG | 0.296378 | 3_4:-78879522 | Msa0525340:CDS |
| AAGATTCAAAGTGACTTCTA+AGG | 0.328744 | 3_4:-78879367 | Msa0525340:CDS |
| AGGTTGATTTGAAACACTTT+AGG | 0.329368 | 3_4:-78879395 | Msa0525340:CDS |
| GTTAAAATCTTCCCAATAAC+AGG | 0.330826 | 3_4:+78879447 | None:intergenic |
| TCAAGATGGCTCCTGTTATT+GGG | 0.345751 | 3_4:-78879458 | Msa0525340:CDS |
| TGAGTTTCCGGGTTTGATTA+AGG | 0.346779 | 3_4:-78879724 | Msa0525340:CDS |
| TGGAAACTCTGCTATGTTAC+TGG | 0.352482 | 3_4:-78879845 | Msa0525340:CDS |
| TTGATTAAGGTGGCGGTTCA+CGG | 0.360760 | 3_4:-78879711 | Msa0525340:CDS |
| AATTTGGAAGGTCAAAGTTT+TGG | 0.362477 | 3_4:-78875700 | Msa0525340:three_prime_UTR |
| GCCTCGTTTGGCGGCGTAGT+AGG | 0.367313 | 3_4:+78880454 | None:intergenic |
| ATTTCTTGGGTGGTGAGTTT+GGG | 0.369932 | 3_4:-78879521 | Msa0525340:CDS |
| GAGAGACCAACCCAATTATC+TGG | 0.379000 | 3_4:+78880116 | None:intergenic |
| TGTTGTCGGCGCCGGCGTCA+TGG | 0.385217 | 3_4:-78880489 | Msa0525340:CDS |
| AATCAAATTGTTCGAGAAGA+AGG | 0.386128 | 3_4:+78880423 | None:intergenic |
| TAACACAGCACCGTGATTAT+GGG | 0.386735 | 3_4:+78880034 | None:intergenic |
| CTTGACAGGGGAGATTGTTC+TGG | 0.394219 | 3_4:+78880189 | None:intergenic |
| TGGGCGACAGAGAGGATCAT+TGG | 0.402552 | 3_4:+78880221 | None:intergenic |
| GATTCACATTCCAGATAATT+GGG | 0.406800 | 3_4:-78880126 | Msa0525340:CDS |
| CTCACGGCGGAGGACTTGAC+AGG | 0.408606 | 3_4:+78880175 | None:intergenic |
| CATGAAATCCTACCAATTAT+GGG | 0.408669 | 3_4:-78880318 | Msa0525340:CDS |
| GTATCAATTTCTTAGTGAAA+AGG | 0.412043 | 3_4:-78875608 | Msa0525340:three_prime_UTR |
| TATCAATTTCTTAGTGAAAA+GGG | 0.412564 | 3_4:-78875607 | Msa0525340:three_prime_UTR |
| GATTATGATGTCATTGTTGT+CGG | 0.413369 | 3_4:-78880503 | Msa0525340:CDS |
| GCTATGTTACTGGAGGATTA+AGG | 0.415435 | 3_4:-78879835 | Msa0525340:CDS |
| TTTGTTGGAGTTGTTCTAGC+TGG | 0.416618 | 3_4:+78875510 | None:intergenic |
| GAGATGAAGGAGTGGGTTGA+AGG | 0.417841 | 3_4:-78879633 | Msa0525340:CDS |
| GGTAGGATTTCATGACCATT+TGG | 0.418690 | 3_4:+78880327 | None:intergenic |
| CACCAAAAGTTTAAATTACA+AGG | 0.426541 | 3_4:+78875368 | None:intergenic |
| TGAAATTCCGGTTCAACCAT+TGG | 0.427438 | 3_4:-78879865 | Msa0525340:CDS |
| TTTCCAACGTTTGCTAGCTT+GGG | 0.428381 | 3_4:-78879777 | Msa0525340:CDS |
| TCAACGATCATGGACTGTTC+AGG | 0.430100 | 3_4:-78880530 | Msa0525340:exon |
| AGAGTTTCCAATGGTTGAAC+CGG | 0.447224 | 3_4:+78879858 | None:intergenic |
| GAAAGGATAATAGATAGAAC+AGG | 0.447983 | 3_4:+78880623 | None:intergenic |
| GTTGTCGGCGCCGGCGTCAT+GGG | 0.448760 | 3_4:-78880488 | Msa0525340:CDS |
| ATACAAGACTGTTTCACAAC+AGG | 0.472960 | 3_4:+78879579 | None:intergenic |
| AACGTTTGCTAGCTTGGGTA+GGG | 0.473620 | 3_4:-78879772 | Msa0525340:CDS |
| GAGGATTAAGGAAGGTCACC+AGG | 0.474413 | 3_4:-78879823 | Msa0525340:CDS |
| CTTGATCAGTTGCATGGGCA+TGG | 0.475335 | 3_4:-78875449 | Msa0525340:three_prime_UTR |
| AGGATCATTGGATCGTTTGA+AGG | 0.481098 | 3_4:+78880233 | None:intergenic |
| CAGGGGAAGTTTACAATTGG+TGG | 0.482610 | 3_4:-78879804 | Msa0525340:CDS |
| CAACGTTTGCTAGCTTGGGT+AGG | 0.482904 | 3_4:-78879773 | Msa0525340:CDS |
| AACCGAGCTTGCAGTGGATG+GGG | 0.483462 | 3_4:-78879427 | Msa0525340:CDS |
| TTTGGCAGTAATGTTGTTGA+GGG | 0.484250 | 3_4:+78880345 | None:intergenic |
| AGATGAAGGAGTGGGTTGAA+GGG | 0.484936 | 3_4:-78879632 | Msa0525340:CDS |
| CACATTCCAGATAATTGGGT+TGG | 0.485990 | 3_4:-78880122 | Msa0525340:CDS |
| CACCAGGGGAAGTTTACAAT+TGG | 0.486347 | 3_4:-78879807 | Msa0525340:CDS |
| AAGCTAGTAAAGAAGATAAG+TGG | 0.486678 | 3_4:-78879891 | Msa0525340:CDS |
| CGGCAACTTGCTCACGGCGG+AGG | 0.489123 | 3_4:+78880165 | None:intergenic |
| AATTATCTGGAATGTGAATC+CGG | 0.491329 | 3_4:+78880129 | None:intergenic |
| TAACCGAGCTTGCAGTGGAT+GGG | 0.492737 | 3_4:-78879428 | Msa0525340:CDS |
| GATGTCATTGTTGTCGGCGC+CGG | 0.493784 | 3_4:-78880497 | Msa0525340:CDS |
| CACCACCGTGGTTCCTCCCA+CGG | 0.495212 | 3_4:-78880395 | Msa0525340:CDS |
| CAATAACAAATCAACGATCA+TGG | 0.496054 | 3_4:-78880540 | Msa0525340:exon |
| CACCAATTGTAAACTTCCCC+TGG | 0.502498 | 3_4:+78879805 | None:intergenic |
| TTCAGGTCATGGGTTCAAGA+TGG | 0.505834 | 3_4:-78879472 | Msa0525340:CDS |
| TAACAACAGAAAGTGTAAGT+AGG | 0.507729 | 3_4:-78875582 | Msa0525340:three_prime_UTR |
| TCAATGACAAAATCCTCATC+CGG | 0.508092 | 3_4:+78879543 | None:intergenic |
| TCCGGGTTTGATTAAGGTGG+CGG | 0.508515 | 3_4:-78879718 | Msa0525340:CDS |
| TGTTGTTACAGTGGGAGCTT+GGG | 0.510640 | 3_4:-78879919 | Msa0525340:CDS |
| TTAACCGAGCTTGCAGTGGA+TGG | 0.511740 | 3_4:-78879429 | Msa0525340:CDS |
| AGCTAGTAAAGAAGATAAGT+GGG | 0.513331 | 3_4:-78879890 | Msa0525340:CDS |
| CGGTGGCAACCCGTGTGACC+CGG | 0.513627 | 3_4:-78879691 | Msa0525340:CDS |
| TGAAGGGAGATTCTGCGGGT+TGG | 0.515546 | 3_4:-78879616 | Msa0525340:CDS |
| ATCAAATTGTTCGAGAAGAA+GGG | 0.518597 | 3_4:+78880424 | None:intergenic |
| TATATTTGCAGGAATTTGGA+AGG | 0.520459 | 3_4:-78875712 | Msa0525340:intron |
| TACAGTGCAAAGGAAATTGA+AGG | 0.520934 | 3_4:-78875666 | Msa0525340:three_prime_UTR |
| AACAACAGAAAGTGTAAGTA+GGG | 0.525388 | 3_4:-78875581 | Msa0525340:three_prime_UTR |
| TTTACACTTGATCAGTTGCA+TGG | 0.525780 | 3_4:-78875455 | Msa0525340:three_prime_UTR |
| GATTTGAAACACTTTAGGAT+TGG | 0.528059 | 3_4:-78879390 | Msa0525340:CDS |
| GTGTGGTTTAGCGTTGTGAA+AGG | 0.530622 | 3_4:+78880668 | None:intergenic |
| GTGTTGTTACAGTGGGAGCT+TGG | 0.532196 | 3_4:-78879920 | Msa0525340:CDS |
| TGGGTTGAAGGGAGATTCTG+CGG | 0.533320 | 3_4:-78879621 | Msa0525340:CDS |
| TTTGTCATTGATTTCTTGGG+TGG | 0.534690 | 3_4:-78879531 | Msa0525340:CDS |
| AGGAAAATGTAAGAGGAACA+AGG | 0.534752 | 3_4:-78875646 | Msa0525340:three_prime_UTR |
| ATGTGAGAAATTGAGAATGA+AGG | 0.536583 | 3_4:+78880566 | None:intergenic |
| GGTCTCTTATCCGGGTCACA+CGG | 0.536854 | 3_4:+78879681 | None:intergenic |
| TGTGGTTTAGCGTTGTGAAA+GGG | 0.537583 | 3_4:+78880669 | None:intergenic |
| TCAACAACATTACTGCCAAA+TGG | 0.539320 | 3_4:-78880342 | Msa0525340:CDS |
| AGAAATTGAGAATGAAGGAA+AGG | 0.542237 | 3_4:+78880571 | None:intergenic |
| GTATTCAATGACTCCGGATG+AGG | 0.542283 | 3_4:-78879556 | Msa0525340:CDS |
| GTAAGCTGCGCGAATTGTGC+GGG | 0.543156 | 3_4:+78880367 | None:intergenic |
| TTTGGCGGCGTAGTAGGCGG+TGG | 0.546830 | 3_4:+78880460 | None:intergenic |
| CAAAGCTCATCACTTTGACA+TGG | 0.547108 | 3_4:-78880258 | Msa0525340:CDS |
| ATTTGGCAGTAATGTTGTTG+AGG | 0.547801 | 3_4:+78880344 | None:intergenic |
| ATCTGGAATGTGAATCCGGC+CGG | 0.550849 | 3_4:+78880133 | None:intergenic |
| TTGATCAGTTGCATGGGCAT+GGG | 0.553856 | 3_4:-78875448 | Msa0525340:three_prime_UTR |
| AGCTTCTTCCCATAATTGGT+AGG | 0.558510 | 3_4:+78880310 | None:intergenic |
| TTACACTTGATCAGTTGCAT+GGG | 0.560982 | 3_4:-78875454 | Msa0525340:three_prime_UTR |
| GAAGAAGCTCAAGCTCAAGC+AGG | 0.562723 | 3_4:-78880296 | Msa0525340:CDS |
| AAATTGAAGGAAAATGTAAG+AGG | 0.565961 | 3_4:-78875653 | Msa0525340:three_prime_UTR |
| GGAAAATGTAAGAGGAACAA+GGG | 0.566853 | 3_4:-78875645 | Msa0525340:three_prime_UTR |
| AATCCGGCCGGAGAATTTGT+CGG | 0.568911 | 3_4:+78880145 | None:intergenic |
| GGTAAGCTGCGCGAATTGTG+CGG | 0.569669 | 3_4:+78880366 | None:intergenic |
| CAAGTTGCCGACAAATTCTC+CGG | 0.569878 | 3_4:-78880152 | Msa0525340:CDS |
| GAACCCATGACCTGAAAACC+CGG | 0.571256 | 3_4:+78879479 | None:intergenic |
| TGTGATGATGGATGAGATGA+AGG | 0.572411 | 3_4:-78879646 | Msa0525340:CDS |
| TTGCCGACAAATTCTCCGGC+CGG | 0.574294 | 3_4:-78880148 | Msa0525340:CDS |
| GGATCATTGGATCGTTTGAA+GGG | 0.576890 | 3_4:+78880234 | None:intergenic |
| AAAGCTCATCACTTTGACAT+GGG | 0.578190 | 3_4:-78880257 | Msa0525340:CDS |
| ATTTGTCGGCAACTTGCTCA+CGG | 0.585420 | 3_4:+78880159 | None:intergenic |
| TAATTGAACCAAAATAAACT+AGG | 0.586910 | 3_4:-78875534 | Msa0525340:three_prime_UTR |
| GACAGGGGAGATTGTTCTGG+CGG | 0.593037 | 3_4:+78880192 | None:intergenic |
| CGTGAATATAACTATTAGTG+TGG | 0.593409 | 3_4:+78880651 | None:intergenic |
| GTCTCTTATCCGGGTCACAC+GGG | 0.598944 | 3_4:+78879682 | None:intergenic |
| GCCTACTACGCCGCCAAACG+AGG | 0.599772 | 3_4:-78880455 | Msa0525340:CDS |
| ACCGAGCTTGCAGTGGATGG+GGG | 0.601393 | 3_4:-78879426 | Msa0525340:CDS |
| TGTGCGGGATTCACCGTGGG+AGG | 0.601763 | 3_4:+78880382 | None:intergenic |
| TTGTATGTATTCAATGACTC+CGG | 0.607281 | 3_4:-78879562 | Msa0525340:CDS |
| AATTGTGCGGGATTCACCGT+GGG | 0.611044 | 3_4:+78880379 | None:intergenic |
| GGGTTGAAGGGAGATTCTGC+GGG | 0.611176 | 3_4:-78879620 | Msa0525340:CDS |
| TCGTTTGGCGGCGTAGTAGG+CGG | 0.613771 | 3_4:+78880457 | None:intergenic |
| CAGTCACTCGCCCATAATCA+CGG | 0.616130 | 3_4:-78880044 | Msa0525340:CDS |
| TCACGGCGGAGGACTTGACA+GGG | 0.617693 | 3_4:+78880176 | None:intergenic |
| ACCGCCACCTTAATCAAACC+CGG | 0.624770 | 3_4:+78879717 | None:intergenic |
| GTTTCCGGGTTTGATTAAGG+TGG | 0.627790 | 3_4:-78879721 | Msa0525340:CDS |
| AGGATTAAGGAAGGTCACCA+GGG | 0.630417 | 3_4:-78879822 | Msa0525340:CDS |
| CCCGGATAAGAGACCGTGGG+GGG | 0.630913 | 3_4:-78879673 | Msa0525340:CDS |
| ATTCACCGTGGGAGGAACCA+CGG | 0.631205 | 3_4:+78880390 | None:intergenic |
| AGGATAATAGATAGAACAGG+AGG | 0.639923 | 3_4:+78880626 | None:intergenic |
| AAACTCTGCTATGTTACTGG+AGG | 0.639972 | 3_4:-78879842 | Msa0525340:CDS |
| TAACATAGCAGAGTTTCCAA+TGG | 0.642710 | 3_4:+78879849 | None:intergenic |
| TGACCCGGATAAGAGACCGT+GGG | 0.643272 | 3_4:-78879676 | Msa0525340:CDS |
| AAACCCGGAAACTCAAAACT+CGG | 0.646393 | 3_4:+78879732 | None:intergenic |
| TGTTACTGGAGGATTAAGGA+AGG | 0.649177 | 3_4:-78879831 | Msa0525340:CDS |
| CTACCCAAGCTAGCAAACGT+TGG | 0.649915 | 3_4:+78879774 | None:intergenic |
| TGATGGATGAGATGAAGGAG+TGG | 0.652204 | 3_4:-78879641 | Msa0525340:CDS |
| GGTGGAGCTTCCCATGACGC+CGG | 0.655227 | 3_4:+78880478 | None:intergenic |
| GATGGATGAGATGAAGGAGT+GGG | 0.660248 | 3_4:-78879640 | Msa0525340:CDS |
| GACCCGGATAAGAGACCGTG+GGG | 0.662266 | 3_4:-78879675 | Msa0525340:CDS |
| GAATTGTGCGGGATTCACCG+TGG | 0.663241 | 3_4:+78880378 | None:intergenic |
| GTGACCCGGATAAGAGACCG+TGG | 0.667189 | 3_4:-78879677 | Msa0525340:CDS |
| CACGGCGGAGGACTTGACAG+GGG | 0.693821 | 3_4:+78880177 | None:intergenic |
| GTTGGTCTCTCAACAGAACA+CGG | 0.695902 | 3_4:-78880104 | Msa0525340:CDS |
| GGATTAAGGAAGGTCACCAG+GGG | 0.699475 | 3_4:-78879821 | Msa0525340:CDS |
| GCTAGTAAAGAAGATAAGTG+GGG | 0.704260 | 3_4:-78879889 | Msa0525340:CDS |
| ACCCGGATAAGAGACCGTGG+GGG | 0.723073 | 3_4:-78879674 | Msa0525340:CDS |
| ATTAAGGTGGCGGTTCACGG+TGG | 0.723292 | 3_4:-78879708 | Msa0525340:CDS |
| TGTCGGCAACTTGCTCACGG+CGG | 0.753211 | 3_4:+78880162 | None:intergenic |
| CACCGTGGGAGGAACCACGG+TGG | 0.786190 | 3_4:+78880393 | None:intergenic |
| GGTCTCTCAACAGAACACGG+TGG | 0.834718 | 3_4:-78880101 | Msa0525340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAGTATCTTTTATTAAAA+TGG | + | chr3_4:78876830-78876849 | None:intergenic | 10.0% |
| !!! | TTTTAATAAAAGATACTATA+AGG | - | chr3_4:78876830-78876849 | Msa0525340:intron | 10.0% |
| !!! | ATTCAAATTTCAATTTTTAA+GGG | + | chr3_4:78876876-78876895 | None:intergenic | 10.0% |
| !!! | AATTCAAATTTCAATTTTTA+AGG | + | chr3_4:78876877-78876896 | None:intergenic | 10.0% |
| !! | AATAAAAGAATTCAAAATAA+CGG | + | chr3_4:78877404-78877423 | None:intergenic | 10.0% |
| !!! | AATCATTTATTTTGAATTTT+AGG | - | chr3_4:78877429-78877448 | Msa0525340:intron | 10.0% |
| !! | AAATAAAAAACAAGAAAAAA+TGG | - | chr3_4:78879135-78879154 | Msa0525340:intron | 10.0% |
| !!! | TAGTATTCAAAGTATTATAA+AGG | - | chr3_4:78877086-78877105 | Msa0525340:intron | 15.0% |
| !!! | GTTATTTTGAATTCTTTTAT+TGG | - | chr3_4:78877403-78877422 | Msa0525340:intron | 15.0% |
| !!! | TTTATTTTTGGAATTAATGA+GGG | + | chr3_4:78879115-78879134 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTGGAATTAATG+AGG | + | chr3_4:78879116-78879135 | None:intergenic | 15.0% |
| !!! | TGAGATTAAGATTTATGTTT+TGG | - | chr3_4:78876678-78876697 | Msa0525340:intron | 20.0% |
| !! | AGAAGATTATATCTATCAAA+CGG | - | chr3_4:78876743-78876762 | Msa0525340:intron | 20.0% |
| !! | TCTGTTATAATTGTGATTAT+TGG | - | chr3_4:78876971-78876990 | Msa0525340:intron | 20.0% |
| !! | TTATAATTGTGATTATTGGA+TGG | - | chr3_4:78876975-78876994 | Msa0525340:intron | 20.0% |
| !! | AAAATAAACAACTTTCTCAT+TGG | - | chr3_4:78877178-78877197 | Msa0525340:intron | 20.0% |
| !!! | TCAAGTAAGATACATTTTTA+GGG | - | chr3_4:78877312-78877331 | Msa0525340:intron | 20.0% |
| !! | GGAAAATAAATAAACAAAGA+AGG | + | chr3_4:78877383-78877402 | None:intergenic | 20.0% |
| !!! | GAAGAATATAGTTTAAGTTA+TGG | - | chr3_4:78878700-78878719 | Msa0525340:intron | 20.0% |
| !!! | TCAAATTAGTCATTAACTTT+TGG | - | chr3_4:78879023-78879042 | Msa0525340:intron | 20.0% |
| !! | TGCTAATAAAACTATCTATT+AGG | - | chr3_4:78879185-78879204 | Msa0525340:intron | 20.0% |
| !!! | AATTTATGTCAAGTTGATAT+TGG | - | chr3_4:78880252-78880271 | Msa0525340:CDS | 20.0% |
| !! | TATCAATTTCTTAGTGAAAA+GGG | - | chr3_4:78880381-78880400 | Msa0525340:CDS | 20.0% |
| !! | TAATTGAACCAAAATAAACT+AGG | - | chr3_4:78880454-78880473 | Msa0525340:CDS | 20.0% |
| !! | TGAATATAACAAAAAAGTTC+AGG | + | chr3_4:78880687-78880706 | None:intergenic | 20.0% |
| !! | AAAAAATGTGTTGTTACAGT+GGG | - | chr3_4:78876061-78876080 | Msa0525340:intron | 25.0% |
| !!! | GATTTTGTCATTGATTTCTT+GGG | - | chr3_4:78876454-78876473 | Msa0525340:intron | 25.0% |
| ! | TATACCTAATGCAATAATTG+AGG | - | chr3_4:78876702-78876721 | Msa0525340:intron | 25.0% |
| !! | TTTTCCTCAATTATTGCATT+AGG | + | chr3_4:78876709-78876728 | None:intergenic | 25.0% |
| !!! | AATAGTAAGTTGATTGCAAT+TGG | - | chr3_4:78876998-78877017 | Msa0525340:intron | 25.0% |
| ! | TATTATTGGAAACTTGATGT+TGG | - | chr3_4:78877033-78877052 | Msa0525340:intron | 25.0% |
| ! | ATAAGTTCATGAGTTAAAAC+CGG | - | chr3_4:78877114-78877133 | Msa0525340:intron | 25.0% |
| !! | CTCAAGTAAGATACATTTTT+AGG | - | chr3_4:78877311-78877330 | Msa0525340:intron | 25.0% |
| !!! | GGGATAAATTTTTGAGTTTA+TGG | - | chr3_4:78877353-78877372 | Msa0525340:intron | 25.0% |
| ! | TTTAAATCTAATGCAGTTCA+TGG | + | chr3_4:78877615-78877634 | None:intergenic | 25.0% |
| ! | ATGAACTGCATTAGATTTAA+AGG | - | chr3_4:78877614-78877633 | Msa0525340:intron | 25.0% |
| !! | TTTTGATGTAGAAATCCTTA+TGG | - | chr3_4:78877639-78877658 | Msa0525340:intron | 25.0% |
| ! | TTACTGAATTTCATAAACCT+TGG | - | chr3_4:78877702-78877721 | Msa0525340:intron | 25.0% |
| ! | AGAGATATCTGTCAAATTAA+AGG | - | chr3_4:78878122-78878141 | Msa0525340:intron | 25.0% |
| ! | GAGATATCTGTCAAATTAAA+GGG | - | chr3_4:78878123-78878142 | Msa0525340:intron | 25.0% |
| ! | AGATATCTGTCAAATTAAAG+GGG | - | chr3_4:78878124-78878143 | Msa0525340:intron | 25.0% |
| ! | AGAGATTTCTGTCAAATTAA+AGG | - | chr3_4:78878337-78878356 | Msa0525340:intron | 25.0% |
| ! | GAGATTTCTGTCAAATTAAA+GGG | - | chr3_4:78878338-78878357 | Msa0525340:intron | 25.0% |
| !! | AAGTTTTGCTAACCAATATA+TGG | + | chr3_4:78878462-78878481 | None:intergenic | 25.0% |
| ! | ACTTCAGAATAATTCCTTAT+AGG | - | chr3_4:78878478-78878497 | Msa0525340:intron | 25.0% |
| ! | CTAATGTTATATAGCCTATA+AGG | + | chr3_4:78878495-78878514 | None:intergenic | 25.0% |
| ! | CTTATAGGCTATATAACATT+AGG | - | chr3_4:78878493-78878512 | Msa0525340:intron | 25.0% |
| ! | CTTAAACTATATTCTTCCAT+AGG | + | chr3_4:78878697-78878716 | None:intergenic | 25.0% |
| !!! | GTCACATATTCTTTTAACTT+AGG | + | chr3_4:78878726-78878745 | None:intergenic | 25.0% |
| !! | TTTGTAATCCCTTTTCTTTT+TGG | - | chr3_4:78879083-78879102 | Msa0525340:intron | 25.0% |
| ! | ACAAATATTCCCTTAATTGT+TGG | + | chr3_4:78879469-78879488 | None:intergenic | 25.0% |
| ! | CTATAAAGTAATGAAGAGAA+TGG | - | chr3_4:78879501-78879520 | Msa0525340:CDS | 25.0% |
| ! | ATGAATTGTGTTTGTATCAA+AGG | - | chr3_4:78879921-78879940 | Msa0525340:CDS | 25.0% |
| ! | GTATTACTAGGATTCTATAA+CGG | - | chr3_4:78880099-78880118 | Msa0525340:CDS | 25.0% |
| ! | TATTACTAGGATTCTATAAC+GGG | - | chr3_4:78880100-78880119 | Msa0525340:CDS | 25.0% |
| !! | TTGATATTGGTTATATTTGC+AGG | - | chr3_4:78880265-78880284 | Msa0525340:CDS | 25.0% |
| ! | TCAAAAAAATTACAGTGCAA+AGG | - | chr3_4:78880312-78880331 | Msa0525340:CDS | 25.0% |
| ! | AAATTGAAGGAAAATGTAAG+AGG | - | chr3_4:78880335-78880354 | Msa0525340:CDS | 25.0% |
| ! | GTATCAATTTCTTAGTGAAA+AGG | - | chr3_4:78880380-78880399 | Msa0525340:CDS | 25.0% |
| !! | TGCCTTGTAATTTAAACTTT+TGG | - | chr3_4:78880618-78880637 | Msa0525340:five_prime_UTR | 25.0% |
| ! | CACCAAAAGTTTAAATTACA+AGG | + | chr3_4:78880623-78880642 | None:intergenic | 25.0% |
| !! | CTTGTAATTTAAACTTTTGG+TGG | - | chr3_4:78880621-78880640 | Msa0525340:five_prime_UTR | 25.0% |
| CGTGAATATAACTATTAGTG+TGG | + | chr3_4:78875340-78875359 | None:intergenic | 30.0% | |
| GAAAGGATAATAGATAGAAC+AGG | + | chr3_4:78875368-78875387 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTCTCTGAGAATTG+GGG | + | chr3_4:78875393-78875412 | None:intergenic | 30.0% |
| !!! | GTGTTTTTTCTCTGAGAATT+GGG | + | chr3_4:78875394-78875413 | None:intergenic | 30.0% |
| !!! | TGTGTTTTTTCTCTGAGAAT+TGG | + | chr3_4:78875395-78875414 | None:intergenic | 30.0% |
| AGAAATTGAGAATGAAGGAA+AGG | + | chr3_4:78875420-78875439 | None:intergenic | 30.0% | |
| ATGTGAGAAATTGAGAATGA+AGG | + | chr3_4:78875425-78875444 | None:intergenic | 30.0% | |
| CAATAACAAATCAACGATCA+TGG | - | chr3_4:78875448-78875467 | Msa0525340:three_prime_UTR | 30.0% | |
| GATTATGATGTCATTGTTGT+CGG | - | chr3_4:78875485-78875504 | Msa0525340:three_prime_UTR | 30.0% | |
| ATCAAATTGTTCGAGAAGAA+GGG | + | chr3_4:78875567-78875586 | None:intergenic | 30.0% | |
| AATCAAATTGTTCGAGAAGA+AGG | + | chr3_4:78875568-78875587 | None:intergenic | 30.0% | |
| TCATGAAATCCTACCAATTA+TGG | - | chr3_4:78875669-78875688 | Msa0525340:three_prime_UTR | 30.0% | |
| CATGAAATCCTACCAATTAT+GGG | - | chr3_4:78875670-78875689 | Msa0525340:three_prime_UTR | 30.0% | |
| ! | AATTATCTGGAATGTGAATC+CGG | + | chr3_4:78875862-78875881 | None:intergenic | 30.0% |
| GATTCACATTCCAGATAATT+GGG | - | chr3_4:78875862-78875881 | Msa0525340:intron | 30.0% | |
| !!! | GTTGTTATTTTAACAGCCAA+AGG | - | chr3_4:78876022-78876041 | Msa0525340:intron | 30.0% |
| !!! | TAACAACACATTTTTTGCCA+CGG | + | chr3_4:78876057-78876076 | None:intergenic | 30.0% |
| ! | CAAAAAATGTGTTGTTACAG+TGG | - | chr3_4:78876060-78876079 | Msa0525340:intron | 30.0% |
| AAGCTAGTAAAGAAGATAAG+TGG | - | chr3_4:78876097-78876116 | Msa0525340:intron | 30.0% | |
| AGCTAGTAAAGAAGATAAGT+GGG | - | chr3_4:78876098-78876117 | Msa0525340:intron | 30.0% | |
| TTGTATGTATTCAATGACTC+CGG | - | chr3_4:78876426-78876445 | Msa0525340:intron | 30.0% | |
| !!! | GGATTTTGTCATTGATTTCT+TGG | - | chr3_4:78876453-78876472 | Msa0525340:intron | 30.0% |
| ! | TTTGGGAAAAATGTGGTTTT+AGG | - | chr3_4:78876484-78876503 | Msa0525340:intron | 30.0% |
| GTTAAAATCTTCCCAATAAC+AGG | + | chr3_4:78876544-78876563 | None:intergenic | 30.0% | |
| !! | AGGTTGATTTGAAACACTTT+AGG | - | chr3_4:78876593-78876612 | Msa0525340:intron | 30.0% |
| !! | GATTTGAAACACTTTAGGAT+TGG | - | chr3_4:78876598-78876617 | Msa0525340:intron | 30.0% |
| AAGATTCAAAGTGACTTCTA+AGG | - | chr3_4:78876621-78876640 | Msa0525340:intron | 30.0% | |
| TAGAACAGACAGAATTGAAT+GGG | + | chr3_4:78876781-78876800 | None:intergenic | 30.0% | |
| TAACAGATGCATTCAAAATG+CGG | + | chr3_4:78876958-78876977 | None:intergenic | 30.0% | |
| TTTCTCTCTTGAAATTATGC+CGG | - | chr3_4:78877057-78877076 | Msa0525340:intron | 30.0% | |
| ACTTTGAATACTAATACTGC+CGG | + | chr3_4:78877079-78877098 | None:intergenic | 30.0% | |
| CTGGTTCATATTTATTCAAG+TGG | + | chr3_4:78877204-78877223 | None:intergenic | 30.0% | |
| !! | AAGTGATGTTTTCGTTTTTC+TGG | + | chr3_4:78877223-78877242 | None:intergenic | 30.0% |
| TCTTAATTATCACCAGTTAG+AGG | - | chr3_4:78877249-78877268 | Msa0525340:intron | 30.0% | |
| AACCATTGCTGATATAACTA+TGG | + | chr3_4:78877283-78877302 | None:intergenic | 30.0% | |
| TAGTTATATCAGCAATGGTT+TGG | - | chr3_4:78877283-78877302 | Msa0525340:intron | 30.0% | |
| !! | AGTAAGATACATTTTTAGGG+CGG | - | chr3_4:78877315-78877334 | Msa0525340:intron | 30.0% |
| AAACAAAACCACAAATAGCA+AGG | + | chr3_4:78877501-78877520 | None:intergenic | 30.0% | |
| TATGAGTGCTTGTATGAATA+TGG | - | chr3_4:78877572-78877591 | Msa0525340:intron | 30.0% | |
| ! | ATTCAGTAAGTGGAGTTTTA+TGG | + | chr3_4:78877691-78877710 | None:intergenic | 30.0% |
| GGTTTATGAAATTCAGTAAG+TGG | + | chr3_4:78877701-78877720 | None:intergenic | 30.0% | |
| ! | TATTTGATGAAGTGTTCATG+AGG | - | chr3_4:78877970-78877989 | Msa0525340:intron | 30.0% |
| ! | ATTTGATGAAGTGTTCATGA+GGG | - | chr3_4:78877971-78877990 | Msa0525340:intron | 30.0% |
| !! | ATATCTCTAAAGTCATTCTC+GGG | + | chr3_4:78878110-78878129 | None:intergenic | 30.0% |
| !! | GATATCTCTAAAGTCATTCT+CGG | + | chr3_4:78878111-78878130 | None:intergenic | 30.0% |
| !! | AAATCTCTAAAGTCATTCTC+GGG | + | chr3_4:78878325-78878344 | None:intergenic | 30.0% |
| !! | GAAATCTCTAAAGTCATTCT+CGG | + | chr3_4:78878326-78878345 | None:intergenic | 30.0% |
| TAAGCATCATATGTTAGTGA+AGG | - | chr3_4:78878403-78878422 | Msa0525340:intron | 30.0% | |
| ! | TCTGTATATAAGCTTTGACT+TGG | + | chr3_4:78878430-78878449 | None:intergenic | 30.0% |
| AGTCAAAGCTTATATACAGA+AGG | - | chr3_4:78878430-78878449 | Msa0525340:intron | 30.0% | |
| CTCTGTGATTCATCTTTAAA+TGG | + | chr3_4:78878613-78878632 | None:intergenic | 30.0% | |
| ATGAATCACAGAGTTGTAAA+TGG | - | chr3_4:78878620-78878639 | Msa0525340:intron | 30.0% | |
| AGAGTTGTAAATGGTGATAT+GGG | - | chr3_4:78878629-78878648 | Msa0525340:intron | 30.0% | |
| AGTTAAAAGAATATGTGACG+TGG | - | chr3_4:78878727-78878746 | Msa0525340:intron | 30.0% | |
| TAGCTCATAGATAATCAACT+TGG | + | chr3_4:78878995-78879014 | None:intergenic | 30.0% | |
| AGTTAATGACTAATTTGAGC+TGG | + | chr3_4:78879021-78879040 | None:intergenic | 30.0% | |
| ! | TAACTTTTGGCAGATTCTAT+AGG | - | chr3_4:78879036-78879055 | Msa0525340:intron | 30.0% |
| ! | AACTTTTGGCAGATTCTATA+GGG | - | chr3_4:78879037-78879056 | Msa0525340:intron | 30.0% |
| !! | CACACTAATTCTACTTTTGA+CGG | + | chr3_4:78879290-78879309 | None:intergenic | 30.0% |
| TCTCTCATCATTCTGTAAAT+TGG | - | chr3_4:78879324-78879343 | Msa0525340:intron | 30.0% | |
| TCATTCTGTAAATTGGATTG+TGG | - | chr3_4:78879331-78879350 | Msa0525340:intron | 30.0% | |
| TCACTTGATCCAACAATTAA+GGG | - | chr3_4:78879457-78879476 | Msa0525340:CDS | 30.0% | |
| ! | AAGAACAGAATTTCTAGAAG+GGG | + | chr3_4:78879592-78879611 | None:intergenic | 30.0% |
| ! | CAAGAACAGAATTTCTAGAA+GGG | + | chr3_4:78879593-78879612 | None:intergenic | 30.0% |
| ! | ACAAGAACAGAATTTCTAGA+AGG | + | chr3_4:78879594-78879613 | None:intergenic | 30.0% |
| TGAATTTGTGGTCAAATGAA+GGG | + | chr3_4:78879622-78879641 | None:intergenic | 30.0% | |
| ATGAATTTGTGGTCAAATGA+AGG | + | chr3_4:78879623-78879642 | None:intergenic | 30.0% | |
| GTAACTCTCAAATGAATTTG+TGG | + | chr3_4:78879634-78879653 | None:intergenic | 30.0% | |
| ! | GTTAGTGAAAGCATATGTAA+GGG | + | chr3_4:78879718-78879737 | None:intergenic | 30.0% |
| ! | TGTTAGTGAAAGCATATGTA+AGG | + | chr3_4:78879719-78879738 | None:intergenic | 30.0% |
| !! | TTTTGTTTCTTTTGAACACG+AGG | - | chr3_4:78879752-78879771 | Msa0525340:CDS | 30.0% |
| TTAAAAGAAGAACTGAGCTA+AGG | + | chr3_4:78880221-78880240 | None:intergenic | 30.0% | |
| TGGTTATATTTGCAGGAATT+TGG | - | chr3_4:78880272-78880291 | Msa0525340:CDS | 30.0% | |
| TATATTTGCAGGAATTTGGA+AGG | - | chr3_4:78880276-78880295 | Msa0525340:CDS | 30.0% | |
| ! | AATTTGGAAGGTCAAAGTTT+TGG | - | chr3_4:78880288-78880307 | Msa0525340:CDS | 30.0% |
| ! | TAACAACAGAAAGTGTAAGT+AGG | - | chr3_4:78880406-78880425 | Msa0525340:CDS | 30.0% |
| ! | AACAACAGAAAGTGTAAGTA+GGG | - | chr3_4:78880407-78880426 | Msa0525340:CDS | 30.0% |
| !! | AAGCATAAACTGAGTTTTGT+TGG | + | chr3_4:78880496-78880515 | None:intergenic | 30.0% |
| AGGATAATAGATAGAACAGG+AGG | + | chr3_4:78875365-78875384 | None:intergenic | 35.0% | |
| !!! | GTTTTTTCTCTGAGAATTGG+GGG | + | chr3_4:78875392-78875411 | None:intergenic | 35.0% |
| TTTGGCAGTAATGTTGTTGA+GGG | + | chr3_4:78875646-78875665 | None:intergenic | 35.0% | |
| ATTTGGCAGTAATGTTGTTG+AGG | + | chr3_4:78875647-78875666 | None:intergenic | 35.0% | |
| TCAACAACATTACTGCCAAA+TGG | - | chr3_4:78875646-78875665 | Msa0525340:three_prime_UTR | 35.0% | |
| AAAGCTCATCACTTTGACAT+GGG | - | chr3_4:78875731-78875750 | Msa0525340:intron | 35.0% | |
| GGATTCACATTCCAGATAAT+TGG | - | chr3_4:78875861-78875880 | Msa0525340:intron | 35.0% | |
| ! | AAACATCGTTACAGCTTTTG+TGG | + | chr3_4:78875924-78875943 | None:intergenic | 35.0% |
| GTAGACATAAAAAACGACAG+CGG | - | chr3_4:78875995-78876014 | Msa0525340:intron | 35.0% | |
| GCTAGTAAAGAAGATAAGTG+GGG | - | chr3_4:78876099-78876118 | Msa0525340:intron | 35.0% | |
| TAACATAGCAGAGTTTCCAA+TGG | + | chr3_4:78876142-78876161 | None:intergenic | 35.0% | |
| !!! | TTGGGTAGGGTTTTATTGTA+TGG | - | chr3_4:78876229-78876248 | Msa0525340:intron | 35.0% |
| ATACAAGACTGTTTCACAAC+AGG | + | chr3_4:78876412-78876431 | None:intergenic | 35.0% | |
| TCAATGACAAAATCCTCATC+CGG | + | chr3_4:78876448-78876467 | None:intergenic | 35.0% | |
| !! | TTTGTCATTGATTTCTTGGG+TGG | - | chr3_4:78876457-78876476 | Msa0525340:intron | 35.0% |
| !!! | AAAAATGTGGTTTTAGGTGC+CGG | - | chr3_4:78876490-78876509 | Msa0525340:intron | 35.0% |
| !! | CAAAGTGACTTCTAAGGTTT+AGG | - | chr3_4:78876627-78876646 | Msa0525340:intron | 35.0% |
| CTAGAACAGACAGAATTGAA+TGG | + | chr3_4:78876782-78876801 | None:intergenic | 35.0% | |
| GGAGTCTGCAAATGTATTAT+TGG | - | chr3_4:78877019-78877038 | Msa0525340:intron | 35.0% | |
| !! | TTAAAACCGGTGGTTGTTTT+CGG | - | chr3_4:78877127-78877146 | Msa0525340:intron | 35.0% |
| AGGAATTGAGCAGATAATTC+AGG | + | chr3_4:78877481-78877500 | None:intergenic | 35.0% | |
| AAACCCGCATGAAATTATGA+AGG | - | chr3_4:78877530-78877549 | Msa0525340:intron | 35.0% | |
| ACAGCCTTCATAATTTCATG+CGG | + | chr3_4:78877537-78877556 | None:intergenic | 35.0% | |
| CATCAAAAGTAACTACAGCA+GGG | + | chr3_4:78877737-78877756 | None:intergenic | 35.0% | |
| AACTCTTAGATCTTGGTTAG+AGG | + | chr3_4:78877891-78877910 | None:intergenic | 35.0% | |
| GCACAAAAACTCTTAGATCT+TGG | + | chr3_4:78877898-78877917 | None:intergenic | 35.0% | |
| CTTCATCAAATAGCAAGGAA+AGG | + | chr3_4:78877962-78877981 | None:intergenic | 35.0% | |
| GAACACTTCATCAAATAGCA+AGG | + | chr3_4:78877967-78877986 | None:intergenic | 35.0% | |
| ! | TTTGATGAAGTGTTCATGAG+GGG | - | chr3_4:78877972-78877991 | Msa0525340:intron | 35.0% |
| AGAAGGAGATAGCCATATAT+TGG | - | chr3_4:78878447-78878466 | Msa0525340:intron | 35.0% | |
| ! | TGTGAGTGATTACTGATTAG+TGG | - | chr3_4:78878523-78878542 | Msa0525340:intron | 35.0% |
| CAGAGTTGTAAATGGTGATA+TGG | - | chr3_4:78878628-78878647 | Msa0525340:intron | 35.0% | |
| TCACACTGTGGACAATATTA+TGG | - | chr3_4:78878652-78878671 | Msa0525340:intron | 35.0% | |
| TGTGGACAATATTATGGCTA+AGG | - | chr3_4:78878658-78878677 | Msa0525340:intron | 35.0% | |
| ! | AGTTAGCTTCACAATATGTG+CGG | + | chr3_4:78878930-78878949 | None:intergenic | 35.0% |
| TAATGACTAATTTGAGCTGG+AGG | + | chr3_4:78879018-78879037 | None:intergenic | 35.0% | |
| ! | ACTTTTGGCAGATTCTATAG+GGG | - | chr3_4:78879038-78879057 | Msa0525340:intron | 35.0% |
| !!! | ATCCCTTTTCTTTTTGGCTT+AGG | - | chr3_4:78879089-78879108 | Msa0525340:intron | 35.0% |
| TAGCAAGCACACTTAGTATT+AGG | - | chr3_4:78879215-78879234 | Msa0525340:intron | 35.0% | |
| AAGCACACTTAGTATTAGGT+TGG | - | chr3_4:78879219-78879238 | Msa0525340:intron | 35.0% | |
| CTGTTATGATACCTATTGAG+AGG | - | chr3_4:78879380-78879399 | Msa0525340:CDS | 35.0% | |
| ! | AACAGATTGGCTAGAGAAAA+GGG | - | chr3_4:78879427-78879446 | Msa0525340:CDS | 35.0% |
| GTCACTTGATCCAACAATTA+AGG | - | chr3_4:78879456-78879475 | Msa0525340:CDS | 35.0% | |
| ! | GAGAATAGCTTAAGTTGTTC+TGG | - | chr3_4:78880008-78880027 | Msa0525340:CDS | 35.0% |
| !!! | ACAGTCTGGTTTTCAGAATA+AGG | + | chr3_4:78880081-78880100 | None:intergenic | 35.0% |
| GAAAACCAGACTGTATTACT+AGG | - | chr3_4:78880087-78880106 | Msa0525340:CDS | 35.0% | |
| AGAATCCTAGTAATACAGTC+TGG | + | chr3_4:78880095-78880114 | None:intergenic | 35.0% | |
| AAAGCAGGAACTATAACAAG+AGG | + | chr3_4:78880146-78880165 | None:intergenic | 35.0% | |
| TAGTTCCTGCTTTCTCTTAT+TGG | - | chr3_4:78880153-78880172 | Msa0525340:CDS | 35.0% | |
| AAATGCCAATAAGAGAAAGC+AGG | + | chr3_4:78880161-78880180 | None:intergenic | 35.0% | |
| TACAGTGCAAAGGAAATTGA+AGG | - | chr3_4:78880322-78880341 | Msa0525340:CDS | 35.0% | |
| AGGAAAATGTAAGAGGAACA+AGG | - | chr3_4:78880342-78880361 | Msa0525340:CDS | 35.0% | |
| GGAAAATGTAAGAGGAACAA+GGG | - | chr3_4:78880343-78880362 | Msa0525340:CDS | 35.0% | |
| ! | TAGCTGGTCCTAGTTTATTT+TGG | + | chr3_4:78880465-78880484 | None:intergenic | 35.0% |
| TTTACACTTGATCAGTTGCA+TGG | - | chr3_4:78880533-78880552 | Msa0525340:exon | 35.0% | |
| TTACACTTGATCAGTTGCAT+GGG | - | chr3_4:78880534-78880553 | Msa0525340:exon | 35.0% | |
| TGTGGTTTAGCGTTGTGAAA+GGG | + | chr3_4:78875322-78875341 | None:intergenic | 40.0% | |
| !! | TTTGATTTTCTTCACCACCG+TGG | - | chr3_4:78875581-78875600 | Msa0525340:three_prime_UTR | 40.0% |
| GGTAGGATTTCATGACCATT+TGG | + | chr3_4:78875664-78875683 | None:intergenic | 40.0% | |
| AGCTTCTTCCCATAATTGGT+AGG | + | chr3_4:78875681-78875700 | None:intergenic | 40.0% | |
| CTTGAGCTTCTTCCCATAAT+TGG | + | chr3_4:78875685-78875704 | None:intergenic | 40.0% | |
| CAAAGCTCATCACTTTGACA+TGG | - | chr3_4:78875730-78875749 | Msa0525340:intron | 40.0% | |
| GGATCATTGGATCGTTTGAA+GGG | + | chr3_4:78875757-78875776 | None:intergenic | 40.0% | |
| AGGATCATTGGATCGTTTGA+AGG | + | chr3_4:78875758-78875777 | None:intergenic | 40.0% | |
| CACATTCCAGATAATTGGGT+TGG | - | chr3_4:78875866-78875885 | Msa0525340:intron | 40.0% | |
| TAACACAGCACCGTGATTAT+GGG | + | chr3_4:78875957-78875976 | None:intergenic | 40.0% | |
| TTAACACAGCACCGTGATTA+TGG | + | chr3_4:78875958-78875977 | None:intergenic | 40.0% | |
| GATAAGTGGGGTTGAAATTC+CGG | - | chr3_4:78876111-78876130 | Msa0525340:intron | 40.0% | |
| TGAAATTCCGGTTCAACCAT+TGG | - | chr3_4:78876123-78876142 | Msa0525340:intron | 40.0% | |
| AGAGTTTCCAATGGTTGAAC+CGG | + | chr3_4:78876133-78876152 | None:intergenic | 40.0% | |
| TGGAAACTCTGCTATGTTAC+TGG | - | chr3_4:78876143-78876162 | Msa0525340:intron | 40.0% | |
| AAACTCTGCTATGTTACTGG+AGG | - | chr3_4:78876146-78876165 | Msa0525340:intron | 40.0% | |
| GCTATGTTACTGGAGGATTA+AGG | - | chr3_4:78876153-78876172 | Msa0525340:intron | 40.0% | |
| TGTTACTGGAGGATTAAGGA+AGG | - | chr3_4:78876157-78876176 | Msa0525340:intron | 40.0% | |
| !! | TTTTCCAACGTTTGCTAGCT+TGG | - | chr3_4:78876210-78876229 | Msa0525340:intron | 40.0% |
| ! | TTTCCAACGTTTGCTAGCTT+GGG | - | chr3_4:78876211-78876230 | Msa0525340:intron | 40.0% |
| AAACCCGGAAACTCAAAACT+CGG | + | chr3_4:78876259-78876278 | None:intergenic | 40.0% | |
| TGAGTTTCCGGGTTTGATTA+AGG | - | chr3_4:78876264-78876283 | Msa0525340:intron | 40.0% | |
| !! | TGTGATGATGGATGAGATGA+AGG | - | chr3_4:78876342-78876361 | Msa0525340:intron | 40.0% |
| ATTTCTTGGGTGGTGAGTTT+GGG | - | chr3_4:78876467-78876486 | Msa0525340:intron | 40.0% | |
| TGGTGAGTTTGGGAAAAATG+TGG | - | chr3_4:78876477-78876496 | Msa0525340:intron | 40.0% | |
| !!! | AAAATGTGGTTTTAGGTGCC+GGG | - | chr3_4:78876491-78876510 | Msa0525340:intron | 40.0% |
| TTCAAGATGGCTCCTGTTAT+TGG | - | chr3_4:78876529-78876548 | Msa0525340:intron | 40.0% | |
| TCAAGATGGCTCCTGTTATT+GGG | - | chr3_4:78876530-78876549 | Msa0525340:intron | 40.0% | |
| ATTCAAAATGCGGAGGGTTA+TGG | + | chr3_4:78876948-78876967 | None:intergenic | 40.0% | |
| AGATGCATTCAAAATGCGGA+GGG | + | chr3_4:78876954-78876973 | None:intergenic | 40.0% | |
| AGTTCATGAGTTAAAACCGG+TGG | - | chr3_4:78877117-78877136 | Msa0525340:intron | 40.0% | |
| AACTATCCGAAAACAACCAC+CGG | + | chr3_4:78877136-78877155 | None:intergenic | 40.0% | |
| ATCACCAGTTAGAGGTTACA+AGG | - | chr3_4:78877257-78877276 | Msa0525340:intron | 40.0% | |
| GGCCATAGTTATATCAGCAA+TGG | - | chr3_4:78877278-78877297 | Msa0525340:intron | 40.0% | |
| !! | GCTCAATTCCTTGCTATTTG+TGG | - | chr3_4:78877490-78877509 | Msa0525340:intron | 40.0% |
| CAGCCTTCATAATTTCATGC+GGG | + | chr3_4:78877536-78877555 | None:intergenic | 40.0% | |
| CCATCAAAAGTAACTACAGC+AGG | + | chr3_4:78877738-78877757 | None:intergenic | 40.0% | |
| !!! | CCTGCTGTAGTTACTTTTGA+TGG | - | chr3_4:78877735-78877754 | Msa0525340:intron | 40.0% |
| !!! | GCTGTAGTTACTTTTGATGG+AGG | - | chr3_4:78877738-78877757 | Msa0525340:intron | 40.0% |
| !! | TTACTTTTGATGGAGGTACG+AGG | - | chr3_4:78877745-78877764 | Msa0525340:intron | 40.0% |
| TGCCTGACAATAGATTGTGA+CGG | - | chr3_4:78877786-78877805 | Msa0525340:intron | 40.0% | |
| TATGATGTCGCCTTTGATGT+TGG | - | chr3_4:78877861-78877880 | Msa0525340:intron | 40.0% | |
| ATGATGTCGCCTTTGATGTT+GGG | - | chr3_4:78877862-78877881 | Msa0525340:intron | 40.0% | |
| TCCTCACAATATAGTGCTTG+AGG | - | chr3_4:78877998-78878017 | Msa0525340:intron | 40.0% | |
| TCCTCAAGCACTATATTGTG+AGG | + | chr3_4:78878002-78878021 | None:intergenic | 40.0% | |
| ATATAGTGCTTGAGGAGTTG+AGG | - | chr3_4:78878006-78878025 | Msa0525340:intron | 40.0% | |
| !! | AAAGGGGCTTTAGTTTGACT+AGG | - | chr3_4:78878140-78878159 | Msa0525340:intron | 40.0% |
| AGTTTGACTAGGTGGATACA+CGG | - | chr3_4:78878151-78878170 | Msa0525340:intron | 40.0% | |
| !!! | ATACACGGAAGGTTTTGGTT+AGG | - | chr3_4:78878166-78878185 | Msa0525340:intron | 40.0% |
| TTAGGCATCATATGTCAGTG+AGG | - | chr3_4:78878184-78878203 | Msa0525340:intron | 40.0% | |
| TAGGCATCATATGTCAGTGA+GGG | - | chr3_4:78878185-78878204 | Msa0525340:intron | 40.0% | |
| TAAAGGGACTTCAGTTTGAC+TGG | - | chr3_4:78878354-78878373 | Msa0525340:intron | 40.0% | |
| GAATATGTGACGTGGTCTAT+CGG | - | chr3_4:78878735-78878754 | Msa0525340:intron | 40.0% | |
| !! | TTGGTTTGTTGGAGCTAGAT+TGG | - | chr3_4:78878890-78878909 | Msa0525340:intron | 40.0% |
| !! | TGGTTTGTTGGAGCTAGATT+GGG | - | chr3_4:78878891-78878910 | Msa0525340:intron | 40.0% |
| GGGATTACAAACGAACAGTT+CGG | + | chr3_4:78879074-78879093 | None:intergenic | 40.0% | |
| GGCCTAAGCCAAAAAGAAAA+GGG | + | chr3_4:78879094-78879113 | None:intergenic | 40.0% | |
| TCAAAGGGGAATCAACAGAT+TGG | - | chr3_4:78879414-78879433 | Msa0525340:CDS | 40.0% | |
| ! | CAACAGATTGGCTAGAGAAA+AGG | - | chr3_4:78879426-78879445 | Msa0525340:CDS | 40.0% |
| GAATGGATGAATGATGTGAG+AGG | - | chr3_4:78879518-78879537 | Msa0525340:CDS | 40.0% | |
| !! | GTTGTTCTGGTTTATGCTCT+AGG | - | chr3_4:78880021-78880040 | Msa0525340:CDS | 40.0% |
| ! | ACTAGGATTCTATAACGGGA+CGG | - | chr3_4:78880104-78880123 | Msa0525340:CDS | 40.0% |
| ACTGAGCTAAGGAAGAAACA+GGG | + | chr3_4:78880210-78880229 | None:intergenic | 40.0% | |
| AACTGAGCTAAGGAAGAAAC+AGG | + | chr3_4:78880211-78880230 | None:intergenic | 40.0% | |
| TTTGTTGGAGTTGTTCTAGC+TGG | + | chr3_4:78880481-78880500 | None:intergenic | 40.0% | |
| GTGTGGTTTAGCGTTGTGAA+AGG | + | chr3_4:78875323-78875342 | None:intergenic | 45.0% | |
| ! | TCAACGATCATGGACTGTTC+AGG | - | chr3_4:78875458-78875477 | Msa0525340:three_prime_UTR | 45.0% |
| ! | GTTCGAGAAGAAGGGTTTTG+AGG | + | chr3_4:78875559-78875578 | None:intergenic | 45.0% |
| ! | ATTGTTCTGGCGGCAGTTTT+GGG | + | chr3_4:78875789-78875808 | None:intergenic | 45.0% |
| ! | ATTTGTCGGCAACTTGCTCA+CGG | + | chr3_4:78875832-78875851 | None:intergenic | 45.0% |
| CAAGTTGCCGACAAATTCTC+CGG | - | chr3_4:78875836-78875855 | Msa0525340:intron | 45.0% | |
| GAGAGACCAACCCAATTATC+TGG | + | chr3_4:78875875-78875894 | None:intergenic | 45.0% | |
| ! | GTTGGTCTCTCAACAGAACA+CGG | - | chr3_4:78875884-78875903 | Msa0525340:intron | 45.0% |
| GCCAAAGGTGAAAAATTCCG+TGG | - | chr3_4:78876037-78876056 | Msa0525340:intron | 45.0% | |
| ! | GCCACGGAATTTTTCACCTT+TGG | + | chr3_4:78876041-78876060 | None:intergenic | 45.0% |
| TGTTGTTACAGTGGGAGCTT+GGG | - | chr3_4:78876069-78876088 | Msa0525340:intron | 45.0% | |
| AGGATTAAGGAAGGTCACCA+GGG | - | chr3_4:78876166-78876185 | Msa0525340:intron | 45.0% | |
| CACCAGGGGAAGTTTACAAT+TGG | - | chr3_4:78876181-78876200 | Msa0525340:intron | 45.0% | |
| CACCAATTGTAAACTTCCCC+TGG | + | chr3_4:78876186-78876205 | None:intergenic | 45.0% | |
| CAGGGGAAGTTTACAATTGG+TGG | - | chr3_4:78876184-78876203 | Msa0525340:intron | 45.0% | |
| ! | AACGTTTGCTAGCTTGGGTA+GGG | - | chr3_4:78876216-78876235 | Msa0525340:intron | 45.0% |
| !!! | ATCGCCGAGTTTTGAGTTTC+CGG | - | chr3_4:78876252-78876271 | Msa0525340:intron | 45.0% |
| GTTTCCGGGTTTGATTAAGG+TGG | - | chr3_4:78876267-78876286 | Msa0525340:intron | 45.0% | |
| ! | TTGATTAAGGTGGCGGTTCA+CGG | - | chr3_4:78876277-78876296 | Msa0525340:intron | 45.0% |
| ! | TGATGGATGAGATGAAGGAG+TGG | - | chr3_4:78876347-78876366 | Msa0525340:intron | 45.0% |
| GATGGATGAGATGAAGGAGT+GGG | - | chr3_4:78876348-78876367 | Msa0525340:intron | 45.0% | |
| !! | AGATGAAGGAGTGGGTTGAA+GGG | - | chr3_4:78876356-78876375 | Msa0525340:intron | 45.0% |
| GTATTCAATGACTCCGGATG+AGG | - | chr3_4:78876432-78876451 | Msa0525340:intron | 45.0% | |
| GATTTCTTGGGTGGTGAGTT+TGG | - | chr3_4:78876466-78876485 | Msa0525340:intron | 45.0% | |
| TTCAGGTCATGGGTTCAAGA+TGG | - | chr3_4:78876516-78876535 | Msa0525340:intron | 45.0% | |
| !! | GATTTTAACCGAGCTTGCAG+TGG | - | chr3_4:78876555-78876574 | Msa0525340:intron | 45.0% |
| CAGATGCATTCAAAATGCGG+AGG | + | chr3_4:78876955-78876974 | None:intergenic | 45.0% | |
| !! | ATGGCCTTGTAACCTCTAAC+TGG | + | chr3_4:78877264-78877283 | None:intergenic | 45.0% |
| ! | GGCGGAGTTTCTTTTAGCAA+GGG | - | chr3_4:78877333-78877352 | Msa0525340:intron | 45.0% |
| CTGTCTTGCTGCATTCCATA+AGG | + | chr3_4:78877657-78877676 | None:intergenic | 45.0% | |
| CACCGTCACAATCTATTGTC+AGG | + | chr3_4:78877791-78877810 | None:intergenic | 45.0% | |
| AATGCAACCTAGATGCCTTG+AGG | - | chr3_4:78877834-78877853 | Msa0525340:intron | 45.0% | |
| ! | ATATCTGCCTCAAGGCATCT+AGG | + | chr3_4:78877844-78877863 | None:intergenic | 45.0% |
| TGATGTCGCCTTTGATGTTG+GGG | - | chr3_4:78877863-78877882 | Msa0525340:intron | 45.0% | |
| AGGCATCATATGTCAGTGAG+GGG | - | chr3_4:78878186-78878205 | Msa0525340:intron | 45.0% | |
| TCCTTGGAATATAGTGCTCG+AGG | - | chr3_4:78878212-78878231 | Msa0525340:intron | 45.0% | |
| TCCTCGAGCACTATATTCCA+AGG | + | chr3_4:78878216-78878235 | None:intergenic | 45.0% | |
| ATATAGTGCTCGAGGAGTTG+AGG | - | chr3_4:78878220-78878239 | Msa0525340:intron | 45.0% | |
| ! | GCTTGATACACGGAAGGTTT+TGG | - | chr3_4:78878379-78878398 | Msa0525340:intron | 45.0% |
| AGGTAAGTGACTCTAGCCTA+TGG | - | chr3_4:78878678-78878697 | Msa0525340:intron | 45.0% | |
| ACGTTGTCAATACACAGTCC+TGG | + | chr3_4:78878800-78878819 | None:intergenic | 45.0% | |
| TTCCCTGTGTAGCCATGAAT+CGG | - | chr3_4:78878851-78878870 | Msa0525340:intron | 45.0% | |
| ATGAATCGGTGAGTGGTGTT+GGG | - | chr3_4:78878865-78878884 | Msa0525340:intron | 45.0% | |
| !! | GGTGTTGGGAATTGGTTTGT+TGG | - | chr3_4:78878879-78878898 | Msa0525340:intron | 45.0% |
| GCACATGCTTAAGCAGCTTT+GGG | - | chr3_4:78878955-78878974 | Msa0525340:intron | 45.0% | |
| !! | GCAGCTTTGGGATATAGTAG+TGG | - | chr3_4:78878967-78878986 | Msa0525340:intron | 45.0% |
| GGGCCTAAGCCAAAAAGAAA+AGG | + | chr3_4:78879095-78879114 | None:intergenic | 45.0% | |
| ATGGTTACCGATGAATGCGT+AGG | - | chr3_4:78879154-78879173 | Msa0525340:intron | 45.0% | |
| ATCCAGTCCTACGCATTCAT+CGG | + | chr3_4:78879164-78879183 | None:intergenic | 45.0% | |
| GTGGCTGTTGTACACAATTG+TGG | - | chr3_4:78879350-78879369 | Msa0525340:intron | 45.0% | |
| GATACCTATTGAGAGGAAGC+CGG | - | chr3_4:78879387-78879406 | Msa0525340:CDS | 45.0% | |
| ATACCTATTGAGAGGAAGCC+GGG | - | chr3_4:78879388-78879407 | Msa0525340:CDS | 45.0% | |
| ! | TTGATTCCCCTTTGATGACC+CGG | + | chr3_4:78879409-78879428 | None:intergenic | 45.0% |
| AGAAGGGGAAGAAGTTCAGA+GGG | + | chr3_4:78879577-78879596 | None:intergenic | 45.0% | |
| TAGAAGGGGAAGAAGTTCAG+AGG | + | chr3_4:78879578-78879597 | None:intergenic | 45.0% | |
| ACAGATAAAGCAGAACCCCA+GGG | + | chr3_4:78879799-78879818 | None:intergenic | 45.0% | |
| AACAGATAAAGCAGAACCCC+AGG | + | chr3_4:78879800-78879819 | None:intergenic | 45.0% | |
| TTGATCAGTTGCATGGGCAT+GGG | - | chr3_4:78880540-78880559 | Msa0525340:exon | 45.0% | |
| !!! | TGTTTTTTATTTTTTATTTT+TGG | + | chr3_4:78879127-78879146 | None:intergenic | 5.0% |
| ! | CTCTGAGAATTGGGGGAGAA+AGG | + | chr3_4:78875385-78875404 | None:intergenic | 50.0% |
| !!! | AAGGGTTTTGAGGCCTCGTT+TGG | + | chr3_4:78875549-78875568 | None:intergenic | 50.0% |
| AATTGTGCGGGATTCACCGT+GGG | + | chr3_4:78875612-78875631 | None:intergenic | 50.0% | |
| GAAGAAGCTCAAGCTCAAGC+AGG | - | chr3_4:78875692-78875711 | Msa0525340:three_prime_UTR | 50.0% | |
| ! | GATTGTTCTGGCGGCAGTTT+TGG | + | chr3_4:78875790-78875809 | None:intergenic | 50.0% |
| CTTGACAGGGGAGATTGTTC+TGG | + | chr3_4:78875802-78875821 | None:intergenic | 50.0% | |
| AATCCGGCCGGAGAATTTGT+CGG | + | chr3_4:78875846-78875865 | None:intergenic | 50.0% | |
| ! | ATCTGGAATGTGAATCCGGC+CGG | + | chr3_4:78875858-78875877 | None:intergenic | 50.0% |
| CAGTCACTCGCCCATAATCA+CGG | - | chr3_4:78875944-78875963 | Msa0525340:intron | 50.0% | |
| ! | GTGTTGTTACAGTGGGAGCT+TGG | - | chr3_4:78876068-78876087 | Msa0525340:intron | 50.0% |
| GAGGATTAAGGAAGGTCACC+AGG | - | chr3_4:78876165-78876184 | Msa0525340:intron | 50.0% | |
| GGATTAAGGAAGGTCACCAG+GGG | - | chr3_4:78876167-78876186 | Msa0525340:intron | 50.0% | |
| CTACCCAAGCTAGCAAACGT+TGG | + | chr3_4:78876217-78876236 | None:intergenic | 50.0% | |
| ! | CAACGTTTGCTAGCTTGGGT+AGG | - | chr3_4:78876215-78876234 | Msa0525340:intron | 50.0% |
| !!! | TCGCCGAGTTTTGAGTTTCC+GGG | - | chr3_4:78876253-78876272 | Msa0525340:intron | 50.0% |
| TCCGGGTTTGATTAAGGTGG+CGG | - | chr3_4:78876270-78876289 | Msa0525340:intron | 50.0% | |
| ACCGCCACCTTAATCAAACC+CGG | + | chr3_4:78876274-78876293 | None:intergenic | 50.0% | |
| !! | GAGATGAAGGAGTGGGTTGA+AGG | - | chr3_4:78876355-78876374 | Msa0525340:intron | 50.0% |
| ! | TGGGTTGAAGGGAGATTCTG+CGG | - | chr3_4:78876367-78876386 | Msa0525340:intron | 50.0% |
| !!! | GTTTTAGGTGCCGGGTTTTC+AGG | - | chr3_4:78876499-78876518 | Msa0525340:intron | 50.0% |
| GAACCCATGACCTGAAAACC+CGG | + | chr3_4:78876512-78876531 | None:intergenic | 50.0% | |
| TTAACCGAGCTTGCAGTGGA+TGG | - | chr3_4:78876559-78876578 | Msa0525340:intron | 50.0% | |
| TAACCGAGCTTGCAGTGGAT+GGG | - | chr3_4:78876560-78876579 | Msa0525340:intron | 50.0% | |
| AGTGGATGGGGGAACTAATG+AGG | - | chr3_4:78876573-78876592 | Msa0525340:intron | 50.0% | |
| ! | GGGCGGAGTTTCTTTTAGCA+AGG | - | chr3_4:78877332-78877351 | Msa0525340:intron | 50.0% |
| !! | TAACTACAGCAGGGCACTGA+GGG | + | chr3_4:78877728-78877747 | None:intergenic | 50.0% |
| GCGACATCATATCTGCCTCA+AGG | + | chr3_4:78877852-78877871 | None:intergenic | 50.0% | |
| TAGAGGAGCCCCAACATCAA+AGG | + | chr3_4:78877874-78877893 | None:intergenic | 50.0% | |
| !! | GGGGCTTTAGTTTGACTAGG+TGG | - | chr3_4:78878143-78878162 | Msa0525340:intron | 50.0% |
| TGACTAGGTGGATACACGGA+AGG | - | chr3_4:78878155-78878174 | Msa0525340:intron | 50.0% | |
| ! | GGTGGATACACGGAAGGTTT+TGG | - | chr3_4:78878161-78878180 | Msa0525340:intron | 50.0% |
| AGGGACTTCAGTTTGACTGG+CGG | - | chr3_4:78878357-78878376 | Msa0525340:intron | 50.0% | |
| TTGACTGGCGGCTTGATACA+CGG | - | chr3_4:78878369-78878388 | Msa0525340:intron | 50.0% | |
| GTTGCGAATTTGCACTGCAG+CGG | - | chr3_4:78878545-78878564 | Msa0525340:intron | 50.0% | |
| TGGTGATATGGGTCACACTG+TGG | - | chr3_4:78878640-78878659 | Msa0525340:intron | 50.0% | |
| GTGACGTGGTCTATCGGTAA+TGG | - | chr3_4:78878741-78878760 | Msa0525340:intron | 50.0% | |
| TTGATGCACGCCTGGAAAAG+TGG | - | chr3_4:78878768-78878787 | Msa0525340:intron | 50.0% | |
| !!! | CTGGTGCTATCCACTTTTCC+AGG | + | chr3_4:78878781-78878800 | None:intergenic | 50.0% |
| CTGGAAAAGTGGATAGCACC+AGG | - | chr3_4:78878779-78878798 | Msa0525340:intron | 50.0% | |
| !! | CACCGATTCATGGCTACACA+GGG | + | chr3_4:78878856-78878875 | None:intergenic | 50.0% |
| !! | TCACCGATTCATGGCTACAC+AGG | + | chr3_4:78878857-78878876 | None:intergenic | 50.0% |
| TGTAGCCATGAATCGGTGAG+TGG | - | chr3_4:78878858-78878877 | Msa0525340:intron | 50.0% | |
| !! | CAACACCACTCACCGATTCA+TGG | + | chr3_4:78878866-78878885 | None:intergenic | 50.0% |
| CATGAATCGGTGAGTGGTGT+TGG | - | chr3_4:78878864-78878883 | Msa0525340:intron | 50.0% | |
| CGCACATGCTTAAGCAGCTT+TGG | - | chr3_4:78878954-78878973 | Msa0525340:intron | 50.0% | |
| TACCGATGAATGCGTAGGAC+TGG | - | chr3_4:78879159-78879178 | Msa0525340:intron | 50.0% | |
| CAGATAAAGCAGAACCCCAG+GGG | + | chr3_4:78879798-78879817 | None:intergenic | 50.0% | |
| CTTGATCAGTTGCATGGGCA+TGG | - | chr3_4:78880539-78880558 | Msa0525340:exon | 50.0% | |
| GATGTCATTGTTGTCGGCGC+CGG | - | chr3_4:78875491-78875510 | Msa0525340:three_prime_UTR | 55.0% | |
| !!! | GGTTTTGAGGCCTCGTTTGG+CGG | + | chr3_4:78875546-78875565 | None:intergenic | 55.0% |
| ATTCACCGTGGGAGGAACCA+CGG | + | chr3_4:78875601-78875620 | None:intergenic | 55.0% | |
| GAATTGTGCGGGATTCACCG+TGG | + | chr3_4:78875613-78875632 | None:intergenic | 55.0% | |
| GTAAGCTGCGCGAATTGTGC+GGG | + | chr3_4:78875624-78875643 | None:intergenic | 55.0% | |
| GGTAAGCTGCGCGAATTGTG+CGG | + | chr3_4:78875625-78875644 | None:intergenic | 55.0% | |
| TGGGCGACAGAGAGGATCAT+TGG | + | chr3_4:78875770-78875789 | None:intergenic | 55.0% | |
| GACAGGGGAGATTGTTCTGG+CGG | + | chr3_4:78875799-78875818 | None:intergenic | 55.0% | |
| TTGCCGACAAATTCTCCGGC+CGG | - | chr3_4:78875840-78875859 | Msa0525340:intron | 55.0% | |
| GGTCTCTCAACAGAACACGG+TGG | - | chr3_4:78875887-78875906 | Msa0525340:intron | 55.0% | |
| ! | ATTAAGGTGGCGGTTCACGG+TGG | - | chr3_4:78876280-78876299 | Msa0525340:intron | 55.0% |
| GTCTCTTATCCGGGTCACAC+GGG | + | chr3_4:78876309-78876328 | None:intergenic | 55.0% | |
| GGTCTCTTATCCGGGTCACA+CGG | + | chr3_4:78876310-78876329 | None:intergenic | 55.0% | |
| TGACCCGGATAAGAGACCGT+GGG | - | chr3_4:78876312-78876331 | Msa0525340:intron | 55.0% | |
| GGGTTGAAGGGAGATTCTGC+GGG | - | chr3_4:78876368-78876387 | Msa0525340:intron | 55.0% | |
| TGAAGGGAGATTCTGCGGGT+TGG | - | chr3_4:78876372-78876391 | Msa0525340:intron | 55.0% | |
| !!! | GTGCCGGGTTTTCAGGTCAT+GGG | - | chr3_4:78876506-78876525 | Msa0525340:intron | 55.0% |
| AACCGAGCTTGCAGTGGATG+GGG | - | chr3_4:78876561-78876580 | Msa0525340:intron | 55.0% | |
| !! | GTAACTACAGCAGGGCACTG+AGG | + | chr3_4:78877729-78877748 | None:intergenic | 55.0% |
| TGTCAGTGAGGGGAAGTCCT+TGG | - | chr3_4:78878196-78878215 | Msa0525340:intron | 55.0% | |
| ! | ATGGACAGTTGATGCACGCC+TGG | - | chr3_4:78878760-78878779 | Msa0525340:intron | 55.0% |
| ! | CGGTGAGTGGTGTTGGGAAT+TGG | - | chr3_4:78878871-78878890 | Msa0525340:intron | 55.0% |
| AGCTGCTTAAGCATGTGCGC+AGG | + | chr3_4:78878953-78878972 | None:intergenic | 55.0% | |
| TGACCCGGCTTCCTCTCAAT+AGG | + | chr3_4:78879394-78879413 | None:intergenic | 55.0% | |
| AGAGGAAGCCGGGTCATCAA+AGG | - | chr3_4:78879398-78879417 | Msa0525340:CDS | 55.0% | |
| GAGGAAGCCGGGTCATCAAA+GGG | - | chr3_4:78879399-78879418 | Msa0525340:CDS | 55.0% | |
| AGGAAGCCGGGTCATCAAAG+GGG | - | chr3_4:78879400-78879419 | Msa0525340:CDS | 55.0% | |
| ! | CTTTGAAAGTCACCGCCCCT+GGG | - | chr3_4:78879780-78879799 | Msa0525340:CDS | 55.0% |
| TTTGAAAGTCACCGCCCCTG+GGG | - | chr3_4:78879781-78879800 | Msa0525340:CDS | 55.0% | |
| ATAAAGCAGAACCCCAGGGG+CGG | + | chr3_4:78879795-78879814 | None:intergenic | 55.0% | |
| TCGTTTGGCGGCGTAGTAGG+CGG | + | chr3_4:78875534-78875553 | None:intergenic | 60.0% | |
| !!! | GGCAGTTTTGGGCGACAGAG+AGG | + | chr3_4:78875778-78875797 | None:intergenic | 60.0% |
| TCACGGCGGAGGACTTGACA+GGG | + | chr3_4:78875815-78875834 | None:intergenic | 60.0% | |
| ! | TGTCGGCAACTTGCTCACGG+CGG | + | chr3_4:78875829-78875848 | None:intergenic | 60.0% |
| GTGACCCGGATAAGAGACCG+TGG | - | chr3_4:78876311-78876330 | Msa0525340:intron | 60.0% | |
| GACCCGGATAAGAGACCGTG+GGG | - | chr3_4:78876313-78876332 | Msa0525340:intron | 60.0% | |
| ACCCGGATAAGAGACCGTGG+GGG | - | chr3_4:78876314-78876333 | Msa0525340:intron | 60.0% | |
| ATCATCACACCTGCCCCCCA+CGG | + | chr3_4:78876331-78876350 | None:intergenic | 60.0% | |
| !!! | GGTGCCGGGTTTTCAGGTCA+TGG | - | chr3_4:78876505-78876524 | Msa0525340:intron | 60.0% |
| ACCGAGCTTGCAGTGGATGG+GGG | - | chr3_4:78876562-78876581 | Msa0525340:intron | 60.0% | |
| TCCCCCATCCACTGCAAGCT+CGG | + | chr3_4:78876566-78876585 | None:intergenic | 60.0% | |
| CTGGCGGCTTGATACACGGA+AGG | - | chr3_4:78878373-78878392 | Msa0525340:intron | 60.0% | |
| !! | GCTTTGAAAGTCACCGCCCC+TGG | - | chr3_4:78879779-78879798 | Msa0525340:CDS | 60.0% |
| GGTGGAGCTTCCCATGACGC+CGG | + | chr3_4:78875513-78875532 | None:intergenic | 65.0% | |
| TTTGGCGGCGTAGTAGGCGG+TGG | + | chr3_4:78875531-78875550 | None:intergenic | 65.0% | |
| GCCTACTACGCCGCCAAACG+AGG | - | chr3_4:78875533-78875552 | Msa0525340:three_prime_UTR | 65.0% | |
| GCCTCGTTTGGCGGCGTAGT+AGG | + | chr3_4:78875537-78875556 | None:intergenic | 65.0% | |
| CACCACCGTGGTTCCTCCCA+CGG | - | chr3_4:78875593-78875612 | Msa0525340:three_prime_UTR | 65.0% | |
| TGTGCGGGATTCACCGTGGG+AGG | + | chr3_4:78875609-78875628 | None:intergenic | 65.0% | |
| CACGGCGGAGGACTTGACAG+GGG | + | chr3_4:78875814-78875833 | None:intergenic | 65.0% | |
| CTCACGGCGGAGGACTTGAC+AGG | + | chr3_4:78875816-78875835 | None:intergenic | 65.0% | |
| CCCCCCACGGTCTCTTATCC+GGG | + | chr3_4:78876318-78876337 | None:intergenic | 65.0% | |
| CCCGGATAAGAGACCGTGGG+GGG | - | chr3_4:78876315-78876334 | Msa0525340:intron | 65.0% | |
| GCCCCCCACGGTCTCTTATC+CGG | + | chr3_4:78876319-78876338 | None:intergenic | 65.0% | |
| GATAAGAGACCGTGGGGGGC+AGG | - | chr3_4:78876319-78876338 | Msa0525340:intron | 65.0% | |
| GTGGGGGGCAGGTGTGATGA+TGG | - | chr3_4:78876330-78876349 | Msa0525340:intron | 65.0% | |
| !! | TGTTGTCGGCGCCGGCGTCA+TGG | - | chr3_4:78875499-78875518 | Msa0525340:three_prime_UTR | 70.0% |
| !! | GTTGTCGGCGCCGGCGTCAT+GGG | - | chr3_4:78875500-78875519 | Msa0525340:three_prime_UTR | 70.0% |
| CACCGTGGGAGGAACCACGG+TGG | + | chr3_4:78875598-78875617 | None:intergenic | 70.0% | |
| ! | CGGCAACTTGCTCACGGCGG+AGG | + | chr3_4:78875826-78875845 | None:intergenic | 70.0% |
| CGGTGGCAACCCGTGTGACC+CGG | - | chr3_4:78876297-78876316 | Msa0525340:intron | 70.0% | |
| !! | CAGCAGGGCACTGAGGGCCA+AGG | + | chr3_4:78877722-78877741 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 78875304 | 78880706 | 78875304 | ID=Msa0525340;Name=Msa0525340 |
| chr3_4 | mRNA | 78875304 | 78880706 | 78875304 | ID=Msa0525340-mRNA-1;Parent=Msa0525340;Name=Msa0525340-mRNA-1;_AED=0.16;_eAED=0.16;_QI=163|1|1|1|0|1|2|420|393 |
| chr3_4 | exon | 78875304 | 78875723 | 78875304 | ID=Msa0525340-mRNA-1:exon:23500;Parent=Msa0525340-mRNA-1 |
| chr3_4 | exon | 78879362 | 78880706 | 78879362 | ID=Msa0525340-mRNA-1:exon:23499;Parent=Msa0525340-mRNA-1 |
| chr3_4 | five_prime_UTR | 78880544 | 78880706 | 78880544 | ID=Msa0525340-mRNA-1:five_prime_utr;Parent=Msa0525340-mRNA-1 |
| chr3_4 | CDS | 78879362 | 78880543 | 78879362 | ID=Msa0525340-mRNA-1:cds;Parent=Msa0525340-mRNA-1 |
| chr3_4 | three_prime_UTR | 78875304 | 78875723 | 78875304 | ID=Msa0525340-mRNA-1:three_prime_utr;Parent=Msa0525340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
