Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360990 | XP_003600113.1 | 97.283 | 184 | 4 | 1 | 1 | 184 | 1 | 183 | 3.01e-126 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360990 | G7IY22 | 97.283 | 184 | 4 | 1 | 1 | 184 | 1 | 183 | 1.44e-126 | 362 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004950 | Msa0360990 | 0.813535 | 2.437521e-51 | -8.615850e-47 |
| Msa0006290 | Msa0360990 | 0.804132 | 2.501963e-49 | -8.615850e-47 |
| Msa0016670 | Msa0360990 | 0.804510 | 2.086804e-49 | -8.615850e-47 |
| Msa0027260 | Msa0360990 | 0.826420 | 2.740052e-54 | -8.615850e-47 |
| Msa0027580 | Msa0360990 | 0.801558 | 8.506523e-49 | -8.615850e-47 |
| Msa0032260 | Msa0360990 | 0.832930 | 7.137756e-56 | -8.615850e-47 |
| Msa0040690 | Msa0360990 | 0.801822 | 7.509389e-49 | -8.615850e-47 |
| Msa0047160 | Msa0360990 | 0.834072 | 3.702593e-56 | -8.615850e-47 |
| Msa0048180 | Msa0360990 | 0.819564 | 1.086838e-52 | -8.615850e-47 |
| Msa0052610 | Msa0360990 | 0.816828 | 4.521431e-52 | -8.615850e-47 |
| Msa0057400 | Msa0360990 | 0.815571 | 8.635437e-52 | -8.615850e-47 |
| Msa0057710 | Msa0360990 | 0.823823 | 1.125783e-53 | -8.615850e-47 |
| Msa0073670 | Msa0360990 | 0.831851 | 1.320384e-55 | -8.615850e-47 |
| Msa0076000 | Msa0360990 | 0.804331 | 2.274277e-49 | -8.615850e-47 |
| Msa0092740 | Msa0360990 | -0.813008 | 3.180860e-51 | -8.615850e-47 |
| Msa0094470 | Msa0360990 | 0.838098 | 3.518935e-57 | -8.615850e-47 |
| Msa0094950 | Msa0360990 | 0.831550 | 1.566877e-55 | -8.615850e-47 |
| Msa0097850 | Msa0360990 | 0.820682 | 6.028642e-53 | -8.615850e-47 |
| Msa0124990 | Msa0360990 | 0.806691 | 7.275843e-50 | -8.615850e-47 |
| Msa0127040 | Msa0360990 | 0.806315 | 8.731234e-50 | -8.615850e-47 |
| Msa0127310 | Msa0360990 | 0.844371 | 7.879954e-59 | -8.615850e-47 |
| Msa0128860 | Msa0360990 | 0.807319 | 5.355901e-50 | -8.615850e-47 |
| Msa0137040 | Msa0360990 | 0.809417 | 1.911955e-50 | -8.615850e-47 |
| Msa0137610 | Msa0360990 | -0.832056 | 1.175302e-55 | -8.615850e-47 |
| Msa0141340 | Msa0360990 | 0.808188 | 3.501783e-50 | -8.615850e-47 |
| Msa0144540 | Msa0360990 | 0.803755 | 2.995730e-49 | -8.615850e-47 |
| Msa0167480 | Msa0360990 | 0.824065 | 9.878183e-54 | -8.615850e-47 |
| Msa0170410 | Msa0360990 | 0.804074 | 2.571526e-49 | -8.615850e-47 |
| Msa0174730 | Msa0360990 | 0.806607 | 7.578277e-50 | -8.615850e-47 |
| Msa0183460 | Msa0360990 | 0.800283 | 1.549877e-48 | -8.615850e-47 |
| Msa0187930 | Msa0360990 | 0.804685 | 1.918162e-49 | -8.615850e-47 |
| Msa0194540 | Msa0360990 | 0.810737 | 9.932505e-51 | -8.615850e-47 |
| Msa0199690 | Msa0360990 | 0.812378 | 4.370445e-51 | -8.615850e-47 |
| Msa0211190 | Msa0360990 | 0.802409 | 5.686805e-49 | -8.615850e-47 |
| Msa0226470 | Msa0360990 | 0.819115 | 1.375539e-52 | -8.615850e-47 |
| Msa0227400 | Msa0360990 | 0.829629 | 4.625373e-55 | -8.615850e-47 |
| Msa0231100 | Msa0360990 | 0.822898 | 1.851241e-53 | -8.615850e-47 |
| Msa0231880 | Msa0360990 | 0.824131 | 9.528030e-54 | -8.615850e-47 |
| Msa0236270 | Msa0360990 | 0.801410 | 9.121904e-49 | -8.615850e-47 |
| Msa0239450 | Msa0360990 | 0.809486 | 1.847351e-50 | -8.615850e-47 |
| Msa0241800 | Msa0360990 | 0.804583 | 2.014557e-49 | -8.615850e-47 |
| Msa0244780 | Msa0360990 | 0.803254 | 3.806537e-49 | -8.615850e-47 |
| Msa0260240 | Msa0360990 | 0.834002 | 3.854954e-56 | -8.615850e-47 |
| Msa0260280 | Msa0360990 | 0.831839 | 1.329418e-55 | -8.615850e-47 |
| Msa0262310 | Msa0360990 | 0.820009 | 8.603322e-53 | -8.615850e-47 |
| Msa0262480 | Msa0360990 | 0.824978 | 6.021332e-54 | -8.615850e-47 |
| Msa0280430 | Msa0360990 | 0.829790 | 4.227672e-55 | -8.615850e-47 |
| Msa0291520 | Msa0360990 | 0.817326 | 3.493944e-52 | -8.615850e-47 |
| Msa0300350 | Msa0360990 | 0.815550 | 8.727949e-52 | -8.615850e-47 |
| Msa0304260 | Msa0360990 | 0.824241 | 8.979658e-54 | -8.615850e-47 |
| Msa0304300 | Msa0360990 | 0.809626 | 1.723904e-50 | -8.615850e-47 |
| Msa0304590 | Msa0360990 | 0.835182 | 1.947592e-56 | -8.615850e-47 |
| Msa0304660 | Msa0360990 | 0.834612 | 2.710589e-56 | -8.615850e-47 |
| Msa0331700 | Msa0360990 | 0.834617 | 2.701709e-56 | -8.615850e-47 |
| Msa0337650 | Msa0360990 | 0.841064 | 5.960375e-58 | -8.615850e-47 |
| Msa0355270 | Msa0360990 | 0.808530 | 2.959611e-50 | -8.615850e-47 |
| Msa0360990 | Msa0369220 | 0.814972 | 1.173322e-51 | -8.615850e-47 |
| Msa0360990 | Msa0370160 | -0.817799 | 2.734279e-52 | -8.615850e-47 |
| Msa0360990 | Msa0376690 | 0.817423 | 3.323690e-52 | -8.615850e-47 |
| Msa0360990 | Msa0392940 | 0.819693 | 1.015858e-52 | -8.615850e-47 |
| Msa0360990 | Msa0402330 | 0.801855 | 7.393991e-49 | -8.615850e-47 |
| Msa0360990 | Msa0413450 | 0.804961 | 1.679888e-49 | -8.615850e-47 |
| Msa0360990 | Msa0436200 | 0.802242 | 6.155157e-49 | -8.615850e-47 |
| Msa0360990 | Msa0437690 | -0.829973 | 3.813197e-55 | -8.615850e-47 |
| Msa0360990 | Msa0443390 | 0.822402 | 2.415030e-53 | -8.615850e-47 |
| Msa0360990 | Msa0453230 | 0.943341 | 1.433134e-102 | -8.615850e-47 |
| Msa0360990 | Msa0458060 | 0.824150 | 9.431177e-54 | -8.615850e-47 |
| Msa0360990 | Msa0463500 | 0.802072 | 6.673436e-49 | -8.615850e-47 |
| Msa0360990 | Msa0471590 | 0.817925 | 2.560092e-52 | -8.615850e-47 |
| Msa0360990 | Msa0505150 | 0.813890 | 2.035315e-51 | -8.615850e-47 |
| Msa0360990 | Msa0508590 | 0.806949 | 6.414625e-50 | -8.615850e-47 |
| Msa0360990 | Msa0508870 | 0.814494 | 1.497356e-51 | -8.615850e-47 |
| Msa0360990 | Msa0509950 | -0.824792 | 6.660884e-54 | -8.615850e-47 |
| Msa0360990 | Msa0525340 | 0.808661 | 2.774954e-50 | -8.615850e-47 |
| Msa0360990 | Msa0526540 | 0.813527 | 2.446693e-51 | -8.615850e-47 |
| Msa0360990 | Msa0534900 | 0.824025 | 1.009332e-53 | -8.615850e-47 |
| Msa0360990 | Msa0540550 | 0.815538 | 8.783051e-52 | -8.615850e-47 |
| Msa0360990 | Msa0546360 | 0.838944 | 2.127552e-57 | -8.615850e-47 |
| Msa0360990 | Msa0560470 | 0.831486 | 1.624095e-55 | -8.615850e-47 |
| Msa0360990 | Msa0576940 | 0.815597 | 8.519095e-52 | -8.615850e-47 |
| Msa0360990 | Msa0581070 | 0.811061 | 8.451198e-51 | -8.615850e-47 |
| Msa0360990 | Msa0581130 | 0.812019 | 5.233560e-51 | -8.615850e-47 |
| Msa0360990 | Msa0610390 | 0.811237 | 7.739772e-51 | -8.615850e-47 |
| Msa0360990 | Msa0615660 | 0.800436 | 1.442553e-48 | -8.615850e-47 |
| Msa0360990 | Msa0619510 | 0.811908 | 5.532902e-51 | -8.615850e-47 |
| Msa0360990 | Msa0639120 | 0.846642 | 1.911164e-59 | -8.615850e-47 |
| Msa0360990 | Msa0650920 | 0.817657 | 2.943580e-52 | -8.615850e-47 |
| Msa0360990 | Msa0654870 | 0.829728 | 4.376064e-55 | -8.615850e-47 |
| Msa0360990 | Msa0659600 | 0.806580 | 7.676565e-50 | -8.615850e-47 |
| Msa0360990 | Msa0663900 | 0.800363 | 1.492469e-48 | -8.615850e-47 |
| Msa0360990 | Msa0666230 | 0.811959 | 5.393643e-51 | -8.615850e-47 |
| Msa0360990 | Msa0677290 | 0.802302 | 5.983032e-49 | -8.615850e-47 |
| Msa0360990 | Msa0684500 | 0.811725 | 6.063986e-51 | -8.615850e-47 |
| Msa0360990 | Msa0687630 | 0.829647 | 4.580375e-55 | -8.615850e-47 |
| Msa0360990 | Msa0691900 | 0.808572 | 2.899740e-50 | -8.615850e-47 |
| Msa0360990 | Msa0698060 | 0.810434 | 1.154844e-50 | -8.615850e-47 |
| Msa0360990 | Msa0699570 | 0.800139 | 1.658221e-48 | -8.615850e-47 |
| Msa0360990 | Msa0701280 | 0.800300 | 1.537436e-48 | -8.615850e-47 |
| Msa0360990 | Msa0707390 | 0.814632 | 1.395271e-51 | -8.615850e-47 |
| Msa0360990 | Msa0711490 | 0.822865 | 1.884690e-53 | -8.615850e-47 |
| Msa0360990 | Msa0722020 | 0.800082 | 1.703122e-48 | -8.615850e-47 |
| Msa0360990 | Msa0730640 | 0.812728 | 3.663899e-51 | -8.615850e-47 |
| Msa0360990 | Msa0733480 | 0.838021 | 3.683310e-57 | -8.615850e-47 |
| Msa0360990 | Msa0738100 | 0.824934 | 6.167367e-54 | -8.615850e-47 |
| Msa0360990 | Msa0750920 | 0.803697 | 3.080695e-49 | -8.615850e-47 |
| Msa0360990 | Msa0751010 | 0.807531 | 4.829097e-50 | -8.615850e-47 |
| Msa0360990 | Msa0774540 | 0.840584 | 7.961401e-58 | -8.615850e-47 |
| Msa0360990 | Msa0787750 | 0.805991 | 1.021595e-49 | -8.615850e-47 |
| Msa0360990 | Msa0789680 | 0.801692 | 7.987790e-49 | -8.615850e-47 |
| Msa0360990 | Msa0794050 | 0.806367 | 8.515111e-50 | -8.615850e-47 |
| Msa0360990 | Msa0797750 | 0.806211 | 9.185477e-50 | -8.615850e-47 |
| Msa0360990 | Msa0802410 | 0.802556 | 5.304837e-49 | -8.615850e-47 |
| Msa0360990 | Msa0805500 | 0.820548 | 6.472345e-53 | -8.615850e-47 |
| Msa0360990 | Msa0812140 | 0.802272 | 6.068296e-49 | -8.615850e-47 |
| Msa0360990 | Msa0812570 | 0.831800 | 1.358978e-55 | -8.615850e-47 |
| Msa0360990 | Msa0814250 | 0.815653 | 8.281641e-52 | -8.615850e-47 |
| Msa0360990 | Msa0823090 | 0.800563 | 1.359353e-48 | -8.615850e-47 |
| Msa0360990 | Msa0824640 | 0.805035 | 1.621369e-49 | -8.615850e-47 |
| Msa0360990 | Msa0826500 | 0.826283 | 2.954111e-54 | -8.615850e-47 |
| Msa0360990 | Msa0830880 | 0.801087 | 1.062218e-48 | -8.615850e-47 |
| Msa0360990 | Msa0839200 | 0.802080 | 6.646087e-49 | -8.615850e-47 |
| Msa0360990 | Msa0850960 | 0.809389 | 1.938659e-50 | -8.615850e-47 |
| Msa0360990 | Msa0852390 | 0.833977 | 3.911687e-56 | -8.615850e-47 |
| Msa0360990 | Msa0852860 | 0.803632 | 3.176909e-49 | -8.615850e-47 |
| Msa0360990 | Msa0864010 | 0.807536 | 4.819248e-50 | -8.615850e-47 |
| Msa0360990 | Msa0900630 | 0.821078 | 4.889213e-53 | -8.615850e-47 |
| Msa0360990 | Msa0926460 | 0.821976 | 3.032403e-53 | -8.615850e-47 |
| Msa0360990 | Msa0959840 | 0.812747 | 3.628375e-51 | -8.615850e-47 |
| Msa0360990 | Msa0965860 | 0.804120 | 2.516154e-49 | -8.615850e-47 |
| Msa0360990 | Msa0966720 | -0.803805 | 2.926088e-49 | -8.615850e-47 |
| Msa0360990 | Msa0970420 | 0.804519 | 2.077828e-49 | -8.615850e-47 |
| Msa0360990 | Msa0985550 | 0.815237 | 1.024897e-51 | -8.615850e-47 |
| Msa0360990 | Msa1006840 | 0.818599 | 1.801769e-52 | -8.615850e-47 |
| Msa0360990 | Msa1019240 | 0.841363 | 4.971954e-58 | -8.615850e-47 |
| Msa0360990 | Msa1019260 | 0.843948 | 1.023699e-58 | -8.615850e-47 |
| Msa0360990 | Msa1022970 | 0.814764 | 1.304673e-51 | -8.615850e-47 |
| Msa0360990 | Msa1055410 | 0.812156 | 4.885697e-51 | -8.615850e-47 |
| Msa0360990 | Msa1073400 | 0.807431 | 5.072799e-50 | -8.615850e-47 |
| Msa0360990 | Msa1073900 | 0.810830 | 9.482184e-51 | -8.615850e-47 |
| Msa0360990 | Msa1079230 | 0.804161 | 2.467572e-49 | -8.615850e-47 |
| Msa0360990 | Msa1084470 | 0.825938 | 3.567173e-54 | -8.615850e-47 |
| Msa0360990 | Msa1093330 | 0.801790 | 7.625667e-49 | -8.615850e-47 |
| Msa0360990 | Msa1093840 | 0.800981 | 1.116460e-48 | -8.615850e-47 |
| Msa0360990 | Msa1104140 | 0.826078 | 3.304898e-54 | -8.615850e-47 |
| Msa0360990 | Msa1104210 | 0.831661 | 1.471050e-55 | -8.615850e-47 |
| Msa0360990 | Msa1119200 | 0.825350 | 4.917102e-54 | -8.615850e-47 |
| Msa0360990 | Msa1122820 | 0.803136 | 4.025396e-49 | -8.615850e-47 |
| Msa0360990 | Msa1126510 | 0.814969 | 1.175183e-51 | -8.615850e-47 |
| Msa0360990 | Msa1126770 | 0.809272 | 2.053546e-50 | -8.615850e-47 |
| Msa0360990 | Msa1126850 | 0.800968 | 1.123451e-48 | -8.615850e-47 |
| Msa0360990 | Msa1131560 | 0.844917 | 5.616954e-59 | -8.615850e-47 |
| Msa0360990 | Msa1143840 | 0.802769 | 4.793763e-49 | -8.615850e-47 |
| Msa0360990 | Msa1165960 | 0.814709 | 1.341619e-51 | -8.615850e-47 |
| Msa0360990 | Msa1166330 | 0.803094 | 4.107126e-49 | -8.615850e-47 |
| Msa0360990 | Msa1166340 | 0.801518 | 8.669931e-49 | -8.615850e-47 |
| Msa0360990 | Msa1166860 | 0.809728 | 1.639499e-50 | -8.615850e-47 |
| Msa0360990 | Msa1166870 | 0.843830 | 1.100547e-58 | -8.615850e-47 |
| Msa0360990 | Msa1174100 | 0.809309 | 2.016594e-50 | -8.615850e-47 |
| Msa0360990 | Msa1179950 | 0.823103 | 1.658916e-53 | -8.615850e-47 |
| Msa0360990 | Msa1179980 | 0.824781 | 6.701066e-54 | -8.615850e-47 |
| Msa0360990 | Msa1183660 | 0.813559 | 2.407210e-51 | -8.615850e-47 |
| Msa0360990 | Msa1184370 | 0.806443 | 8.207316e-50 | -8.615850e-47 |
| Msa0360990 | Msa1201650 | 0.802841 | 4.633244e-49 | -8.615850e-47 |
| Msa0360990 | Msa1201830 | 0.829405 | 5.244873e-55 | -8.615850e-47 |
| Msa0360990 | Msa1202580 | 0.816302 | 5.932787e-52 | -8.615850e-47 |
| Msa0360990 | Msa1204250 | 0.838445 | 2.863123e-57 | -8.615850e-47 |
| Msa0360990 | Msa1211830 | 0.802765 | 4.802608e-49 | -8.615850e-47 |
| Msa0360990 | Msa1218600 | 0.822628 | 2.139763e-53 | -8.615850e-47 |
| Msa0360990 | Msa1227690 | 0.833901 | 4.085463e-56 | -8.615850e-47 |
| Msa0360990 | Msa1237940 | 0.829206 | 5.861175e-55 | -8.615850e-47 |
| Msa0360990 | Msa1254610 | 0.811094 | 8.312178e-51 | -8.615850e-47 |
| Msa0360990 | Msa1254710 | 0.806023 | 1.005897e-49 | -8.615850e-47 |
| Msa0360990 | Msa1265630 | 0.831392 | 1.712876e-55 | -8.615850e-47 |
| Msa0360990 | Msa1270620 | 0.841693 | 4.069668e-58 | -8.615850e-47 |
| Msa0360990 | Msa1270690 | 0.830009 | 3.737105e-55 | -8.615850e-47 |
| Msa0360990 | Msa1271580 | 0.830868 | 2.304614e-55 | -8.615850e-47 |
| Msa0360990 | Msa1274280 | 0.801196 | 1.009083e-48 | -8.615850e-47 |
| Msa0360990 | Msa1286510 | 0.816948 | 4.250130e-52 | -8.615850e-47 |
| Msa0360990 | Msa1294840 | 0.819176 | 1.332194e-52 | -8.615850e-47 |
| Msa0360990 | Msa1295110 | 0.813594 | 2.365337e-51 | -8.615850e-47 |
| Msa0360990 | Msa1299700 | 0.820254 | 7.558690e-53 | -8.615850e-47 |
| Msa0360990 | Msa1306990 | 0.832892 | 7.292022e-56 | -8.615850e-47 |
| Msa0360990 | Msa1332220 | 0.800237 | 1.583446e-48 | -8.615850e-47 |
| Msa0360990 | Msa1332590 | 0.805367 | 1.381673e-49 | -8.615850e-47 |
| Msa0360990 | Msa1333110 | 0.837355 | 5.457176e-57 | -8.615850e-47 |
| Msa0360990 | Msa1349570 | 0.803445 | 3.474576e-49 | -8.615850e-47 |
| Msa0360990 | Msa1355700 | 0.810821 | 9.524832e-51 | -8.615850e-47 |
| Msa0360990 | Msa1359390 | 0.805453 | 1.325320e-49 | -8.615850e-47 |
| Msa0360990 | Msa1363330 | 0.810593 | 1.067034e-50 | -8.615850e-47 |
| Msa0360990 | Msa1365150 | 0.821998 | 2.995939e-53 | -8.615850e-47 |
| Msa0360990 | Msa1367880 | 0.808945 | 2.413724e-50 | -8.615850e-47 |
| Msa0360990 | Msa1368210 | 0.826206 | 3.080059e-54 | -8.615850e-47 |
| Msa0360990 | Msa1379760 | 0.815283 | 1.000740e-51 | -8.615850e-47 |
| Msa0360990 | Msa1386600 | 0.810450 | 1.145678e-50 | -8.615850e-47 |
| Msa0360990 | Msa1394290 | 0.824354 | 8.447036e-54 | -8.615850e-47 |
| Msa0360990 | Msa1394500 | 0.800444 | 1.437203e-48 | -8.615850e-47 |
| Msa0360990 | Msa1397940 | 0.811640 | 6.327311e-51 | -8.615850e-47 |
| Msa0360990 | Msa1404190 | 0.819969 | 8.782784e-53 | -8.615850e-47 |
| Msa0360990 | Msa1432700 | 0.806597 | 7.615789e-50 | -8.615850e-47 |
| Msa0360990 | Msa1438640 | 0.818438 | 1.959886e-52 | -8.615850e-47 |
| Msa0360990 | Msa1444310 | 0.849914 | 2.381528e-60 | -8.615850e-47 |
| Msa0360990 | Msa1450280 | 0.811729 | 6.050484e-51 | -8.615850e-47 |
| Msa0360990 | Msa1461490 | 0.832685 | 8.209078e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360990 | MtrunA17_Chr3g0099071 | 97.283 | 184 | 4 | 1 | 1 | 184 | 1 | 183 | 2.77e-130 | 362 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360990 | AT4G26965.1 | 58.602 | 186 | 73 | 2 | 1 | 184 | 1 | 184 | 5.14e-68 | 206 |
| Msa0360990 | AT4G26965.2 | 60.403 | 149 | 55 | 2 | 38 | 184 | 1 | 147 | 2.54e-50 | 159 |
Find 76 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGATGGGTGGTGTTTA+AGG | 0.097388 | 3_1:-51055439 | Msa0360990:CDS |
| ACCATCAATTTGTTCATTTC+TGG | 0.124667 | 3_1:+51056626 | None:intergenic |
| TCAAAACTAAAGATATTATT+TGG | 0.159337 | 3_1:+51051170 | None:intergenic |
| CCTGACTCTACTTCCTTCTT+TGG | 0.206566 | 3_1:+51052942 | None:intergenic |
| TAGTTATTTGTCTGAAAATA+TGG | 0.219909 | 3_1:-51051029 | Msa0360990:three_prime_UTR |
| GGTTGAATGGGCAGCGTAAA+AGG | 0.231907 | 3_1:-51055254 | Msa0360990:CDS |
| TTGGAATATAACGTTGATTC+TGG | 0.241713 | 3_1:+51056838 | None:intergenic |
| AGGGTACTTGGGAAGATTAC+TGG | 0.298626 | 3_1:-51056705 | Msa0360990:CDS |
| CATCTATGTGTGTGAGAAAC+AGG | 0.300613 | 3_1:+51056863 | None:intergenic |
| ATTAGAACACACAACAAGTT+TGG | 0.320829 | 3_1:+51056819 | None:intergenic |
| GTTGGAGGCTGCCAGGTTCC+AGG | 0.321767 | 3_1:+51051432 | None:intergenic |
| ACTAATTGCTCCAAGTGATA+TGG | 0.335532 | 3_1:+51050978 | None:intergenic |
| GTCTGAAAATATGGATGTAT+TGG | 0.340919 | 3_1:-51051020 | Msa0360990:three_prime_UTR |
| TGGCAGCCTCCAACTTGATC+TGG | 0.355187 | 3_1:-51051423 | Msa0360990:exon |
| ACCAGAAATGAACAAATTGA+TGG | 0.357823 | 3_1:-51056627 | Msa0360990:CDS |
| AAGAGATGGGTGGTGTTTAA+GGG | 0.371563 | 3_1:-51055438 | Msa0360990:CDS |
| TTCACATTATCATAGATAAC+AGG | 0.373890 | 3_1:-51050933 | Msa0360990:three_prime_UTR |
| TTCAGGACTTCAGAGCCAAC+TGG | 0.383317 | 3_1:-51051474 | Msa0360990:intron |
| GTTTCAGGAACAGATGGAAT+TGG | 0.393307 | 3_1:-51053224 | Msa0360990:intron |
| ATGGCTGGTGTGGATAAAAC+TGG | 0.401451 | 3_1:-51056663 | Msa0360990:CDS |
| AATCAGAATGAGGCAAAATC+AGG | 0.414787 | 3_1:+51051376 | None:intergenic |
| TCCTAGTGAAAGAGAAGAGA+TGG | 0.447561 | 3_1:-51055452 | Msa0360990:intron |
| CATGATCCTACATCCATTCC+AGG | 0.453705 | 3_1:-51055411 | Msa0360990:intron |
| GAATGGATATGTTGGTTGAA+TGG | 0.457830 | 3_1:-51055267 | Msa0360990:CDS |
| GATATTATTTGGAAAGAACT+AGG | 0.462132 | 3_1:+51051181 | None:intergenic |
| ACTATCCTCTTATATATCTC+AGG | 0.470302 | 3_1:-51050883 | Msa0360990:three_prime_UTR |
| TTTCAATTTACCTCTGGAGT+TGG | 0.471997 | 3_1:+51055228 | None:intergenic |
| ACTTCAGAGCCAACTGGGTC+AGG | 0.472998 | 3_1:-51051468 | Msa0360990:CDS |
| AATGGATATGTTGGTTGAAT+GGG | 0.479178 | 3_1:-51055266 | Msa0360990:CDS |
| TGACTACCTTCGGAAGAAAC+CGG | 0.488607 | 3_1:+51052770 | None:intergenic |
| GTTGTTCACCAATCGAACTA+TGG | 0.489049 | 3_1:-51056682 | Msa0360990:CDS |
| AGATCAAGTTGGAGGCTGCC+AGG | 0.490958 | 3_1:+51051425 | None:intergenic |
| GGCAGCCTCCAACTTGATCT+GGG | 0.494082 | 3_1:-51051422 | Msa0360990:exon |
| CATAAAATATATACCTGGAA+TGG | 0.499350 | 3_1:+51055398 | None:intergenic |
| GATAGTACAATAGAAAGTAA+AGG | 0.500814 | 3_1:+51050900 | None:intergenic |
| CCAAAGAAGGAAGTAGAGTC+AGG | 0.502701 | 3_1:-51052942 | Msa0360990:CDS |
| CAGGAATGTTGGTGTCAGTA+AGG | 0.508934 | 3_1:+51051395 | None:intergenic |
| CTCAAGTCATCCCTTGTGCC+AGG | 0.509785 | 3_1:+51052548 | None:intergenic |
| CAGTTTCCGGTTTCTTCCGA+AGG | 0.522530 | 3_1:-51052776 | Msa0360990:intron |
| TTCACCAATCGAACTATGGC+TGG | 0.525835 | 3_1:-51056678 | Msa0360990:CDS |
| TATATACCTGGAATGGATGT+AGG | 0.527072 | 3_1:+51055405 | None:intergenic |
| GGCAAGGGTCCTTGCTTGCA+AGG | 0.528303 | 3_1:+51051107 | None:intergenic |
| GTTGAATGGGCAGCGTAAAA+GGG | 0.537561 | 3_1:-51055253 | Msa0360990:CDS |
| AGTTCTCAAGAAAGAAGAAG+AGG | 0.538559 | 3_1:-51052974 | Msa0360990:CDS |
| GGGTACTTGGGAAGATTACT+GGG | 0.540612 | 3_1:-51056704 | Msa0360990:CDS |
| TGAGGCAAAATCAGGAATGT+TGG | 0.541862 | 3_1:+51051384 | None:intergenic |
| GAGGAAAGGAAAGCCAAAGA+AGG | 0.545436 | 3_1:-51052955 | Msa0360990:CDS |
| CACACCAGCCATAGTTCGAT+TGG | 0.548606 | 3_1:+51056674 | None:intergenic |
| CAATCGAACTATGGCTGGTG+TGG | 0.548825 | 3_1:-51056673 | Msa0360990:CDS |
| GTCCTCCCAGATCAAGTTGG+AGG | 0.564469 | 3_1:+51051417 | None:intergenic |
| ACAATCTTATCCATATCACT+TGG | 0.570544 | 3_1:-51050988 | Msa0360990:three_prime_UTR |
| TTATTCGTTTCAGGAACAGA+TGG | 0.571562 | 3_1:-51053230 | Msa0360990:intron |
| TCAAGAAAGAAGAAGAGGAA+AGG | 0.573085 | 3_1:-51052969 | Msa0360990:CDS |
| TTGAAGAATCACCTGGCACA+AGG | 0.573819 | 3_1:-51052559 | Msa0360990:CDS |
| TTGCACCTGAGATATATAAG+AGG | 0.577367 | 3_1:+51050878 | None:intergenic |
| TCAGGACTTCAGAGCCAACT+GGG | 0.578081 | 3_1:-51051473 | Msa0360990:intron |
| GTCAGGCGTGTCGTCAACAC+TGG | 0.592271 | 3_1:-51052925 | Msa0360990:intron |
| CCTAGTGAAAGAGAAGAGAT+GGG | 0.599846 | 3_1:-51055451 | Msa0360990:intron |
| AATAAATAAAACATCACGCA+CGG | 0.602974 | 3_1:+51051347 | None:intergenic |
| AAGGTCCTCCCAGATCAAGT+TGG | 0.610876 | 3_1:+51051414 | None:intergenic |
| AAAGATGCACCTGACCCAGT+TGG | 0.611828 | 3_1:+51051459 | None:intergenic |
| TCAAATCTAAACATTAACAA+AGG | 0.615999 | 3_1:-51051133 | Msa0360990:three_prime_UTR |
| AACGAGGTTGAAGAATCACC+TGG | 0.620751 | 3_1:-51052566 | Msa0360990:CDS |
| CTGGCACAAGGGATGACTTG+AGG | 0.632013 | 3_1:-51052547 | Msa0360990:intron |
| TGGTCATATTCGTCGAACAA+AGG | 0.634744 | 3_1:+51051258 | None:intergenic |
| ATCTATGTGTGTGAGAAACA+GGG | 0.645448 | 3_1:+51056864 | None:intergenic |
| TCCATTGTAGGAAACGCTAG+TGG | 0.650147 | 3_1:-51052824 | Msa0360990:intron |
| AACGCGTCAAGTTGTCATTG+TGG | 0.653574 | 3_1:+51051238 | None:intergenic |
| GGGGTAAAGAAATTCAATTG+TGG | 0.655027 | 3_1:+51056755 | None:intergenic |
| AGCCTCCAACTTGATCTGGG+AGG | 0.661097 | 3_1:-51051419 | Msa0360990:exon |
| GTGGTACAGTGACAGCATCA+TGG | 0.664664 | 3_1:+51056774 | None:intergenic |
| TAAAAGGGCTCCAACTCCAG+AGG | 0.675471 | 3_1:-51055238 | Msa0360990:intron |
| TTTCTTTAATATAGGTAACG+AGG | 0.678560 | 3_1:-51052582 | Msa0360990:intron |
| TGAAGAATCACCTGGCACAA+GGG | 0.690362 | 3_1:-51052558 | Msa0360990:CDS |
| TGGCTGGTGTGGATAAAACT+GGG | 0.698720 | 3_1:-51056662 | Msa0360990:CDS |
| AGTGAAAGAGAAGAGATGGG+TGG | 0.731002 | 3_1:-51055448 | Msa0360990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTATTTATTTTATT+GGG | + | chr3_1:51051014-51051033 | None:intergenic | 0.0% |
| !!! | TTTTTATTTATTTATTTTAT+TGG | + | chr3_1:51051015-51051034 | None:intergenic | 0.0% |
| !!! | TTATTTATTTATTTTATTGG+GGG | + | chr3_1:51051012-51051031 | None:intergenic | 10.0% |
| !! | TTAAAAGTTTAAATTCAATA+GGG | + | chr3_1:51052043-51052062 | None:intergenic | 10.0% |
| !!! | TAATTTGTTAAAGATAATTA+AGG | + | chr3_1:51053363-51053382 | None:intergenic | 10.0% |
| !!! | TGATTTTCTTAAATTATTAA+CGG | - | chr3_1:51054012-51054031 | Msa0360990:intron | 10.0% |
| !!! | AATAATTTAACTTTGAAAAA+AGG | + | chr3_1:51055057-51055076 | None:intergenic | 10.0% |
| !!! | TATTTTGATATAATCTTTTT+AGG | - | chr3_1:51055880-51055899 | Msa0360990:intron | 10.0% |
| !!! | ATTTTGATATAATCTTTTTA+GGG | - | chr3_1:51055881-51055900 | Msa0360990:intron | 10.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | - | chr3_1:51051404-51051423 | Msa0360990:three_prime_UTR | 15.0% |
| !! | TTAATTGTTCTTATATTCTA+CGG | - | chr3_1:51051669-51051688 | Msa0360990:intron | 15.0% |
| !! | CTTAAAAGTTTAAATTCAAT+AGG | + | chr3_1:51052044-51052063 | None:intergenic | 15.0% |
| !!! | TTGAATTTAAACTTTTAAGA+AGG | - | chr3_1:51052045-51052064 | Msa0360990:intron | 15.0% |
| !!! | TGAATTTAAACTTTTAAGAA+GGG | - | chr3_1:51052046-51052065 | Msa0360990:intron | 15.0% |
| !!! | TGTTAATTATTTTAGTTGAA+TGG | - | chr3_1:51052461-51052480 | Msa0360990:intron | 15.0% |
| !! | TTCAAAAAATTTGATAGATA+AGG | + | chr3_1:51054605-51054624 | None:intergenic | 15.0% |
| !! | ACATTTACTTTCTTTAATAT+AGG | - | chr3_1:51055155-51055174 | Msa0360990:intron | 15.0% |
| !! | AAATGAAAATCCATTAATTA+AGG | + | chr3_1:51055391-51055410 | None:intergenic | 15.0% |
| !! | ATTAAAATCAATATAGTCAA+TGG | + | chr3_1:51055541-51055560 | None:intergenic | 15.0% |
| !!! | TATTTATTCCTCAAAAATTT+TGG | - | chr3_1:51056413-51056432 | Msa0360990:intron | 15.0% |
| !!! | AAATTATACCAAAATTTTTG+AGG | + | chr3_1:51056424-51056443 | None:intergenic | 15.0% |
| !! | TCAAAACTAAAGATATTATT+TGG | + | chr3_1:51056578-51056597 | None:intergenic | 15.0% |
| !!! | TGAGTTTTGTTTTTTATCTT+TGG | + | chr3_1:51050848-51050867 | None:intergenic | 20.0% |
| !! | ATAAATAAATAAAAATGCGG+AGG | - | chr3_1:51051020-51051039 | Msa0360990:three_prime_UTR | 20.0% |
| !! | TAAATAAATAAAAATGCGGA+GGG | - | chr3_1:51051021-51051040 | Msa0360990:three_prime_UTR | 20.0% |
| !! | TAAACACAAGCATATATTAA+AGG | + | chr3_1:51051180-51051199 | None:intergenic | 20.0% |
| !! | TAATATATGCTTGTGTTTAT+TGG | - | chr3_1:51051181-51051200 | Msa0360990:three_prime_UTR | 20.0% |
| !!! | TTATGGGTTTTATTGATTTT+TGG | - | chr3_1:51051206-51051225 | Msa0360990:three_prime_UTR | 20.0% |
| !!! | ATTTGGTAATACTTTGAAAA+AGG | - | chr3_1:51051710-51051729 | Msa0360990:intron | 20.0% |
| !!! | TTTGGTAATACTTTGAAAAA+GGG | - | chr3_1:51051711-51051730 | Msa0360990:intron | 20.0% |
| !!! | AATGTAACATTTTAAAACCA+TGG | - | chr3_1:51052172-51052191 | Msa0360990:intron | 20.0% |
| !! | ATTCTATTTCGTATTATTGA+TGG | - | chr3_1:51052430-51052449 | Msa0360990:intron | 20.0% |
| !!! | ATTTAACGATTTGTTCAATA+AGG | - | chr3_1:51052774-51052793 | Msa0360990:intron | 20.0% |
| !!! | CATTTTGTTCTTGTAATATT+CGG | - | chr3_1:51053145-51053164 | Msa0360990:intron | 20.0% |
| !!! | TGTTTCTGAGATAATATATT+TGG | - | chr3_1:51053300-51053319 | Msa0360990:intron | 20.0% |
| !!! | ATTTAATAGTTGATACAAAG+AGG | + | chr3_1:51053681-51053700 | None:intergenic | 20.0% |
| !! | GAAAAATAAATTAAAGATGG+TGG | + | chr3_1:51053763-51053782 | None:intergenic | 20.0% |
| !! | GCTGAAAAATAAATTAAAGA+TGG | + | chr3_1:51053766-51053785 | None:intergenic | 20.0% |
| !! | TTGATAAAAATATAGTGTTC+CGG | - | chr3_1:51054178-51054197 | Msa0360990:intron | 20.0% |
| !! | AAATAATAATTTCACTTAGC+TGG | + | chr3_1:51054471-51054490 | None:intergenic | 20.0% |
| !! | AAAAAATTTGATAGATAAGG+TGG | + | chr3_1:51054602-51054621 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTTACTTACTCTT+AGG | - | chr3_1:51054878-51054897 | Msa0360990:intron | 20.0% |
| !! | CTAATTTATATTTCCATTGT+AGG | - | chr3_1:51054909-51054928 | Msa0360990:intron | 20.0% |
| !!! | TGTCTTTTTTCCTTAATTAA+TGG | - | chr3_1:51055378-51055397 | Msa0360990:intron | 20.0% |
| !! | AAATATCTAAACAAAAGGAT+TGG | + | chr3_1:51055426-51055445 | None:intergenic | 20.0% |
| !! | CATGAAAATATCTAAACAAA+AGG | + | chr3_1:51055431-51055450 | None:intergenic | 20.0% |
| !! | TAATTAGATTCTACTTCTTA+GGG | + | chr3_1:51055506-51055525 | None:intergenic | 20.0% |
| !! | TCAAATCTAAACATTAACAA+AGG | - | chr3_1:51056612-51056631 | Msa0360990:intron | 20.0% |
| !! | TAGTTATTTGTCTGAAAATA+TGG | - | chr3_1:51056716-51056735 | Msa0360990:exon | 20.0% |
| ! | CTTGTGTTTATTGGATTTAT+GGG | - | chr3_1:51051190-51051209 | Msa0360990:three_prime_UTR | 25.0% |
| ! | CTGATAGGAATTTAAGAAAA+TGG | - | chr3_1:51051481-51051500 | Msa0360990:intron | 25.0% |
| !! | TTGGTAATACTTTGAAAAAG+GGG | - | chr3_1:51051712-51051731 | Msa0360990:intron | 25.0% |
| ! | AAGTTTAAATTCAATAGGGT+TGG | + | chr3_1:51052039-51052058 | None:intergenic | 25.0% |
| ! | AGTAAAATAAGTAAGAACCA+TGG | + | chr3_1:51052192-51052211 | None:intergenic | 25.0% |
| !!! | TGTCTGATTATACTTGTTTT+TGG | - | chr3_1:51052268-51052287 | Msa0360990:intron | 25.0% |
| ! | CATAAAATATATACCTGGAA+TGG | + | chr3_1:51052350-51052369 | None:intergenic | 25.0% |
| !! | CATTCCAGGTATATATTTTA+TGG | - | chr3_1:51052348-51052367 | Msa0360990:intron | 25.0% |
| ! | ATCACATGTATTAATAGATG+TGG | + | chr3_1:51052412-51052431 | None:intergenic | 25.0% |
| !!! | TTTTAGTTGAATGGATATGT+TGG | - | chr3_1:51052470-51052489 | Msa0360990:intron | 25.0% |
| ! | AGCAAAATGTTATCAAATAG+TGG | - | chr3_1:51052717-51052736 | Msa0360990:intron | 25.0% |
| !! | GTTCAATAAGGACAAAATTT+TGG | - | chr3_1:51052786-51052805 | Msa0360990:CDS | 25.0% |
| !!! | ACAAAATTTTGGCTAAGATA+GGG | - | chr3_1:51052797-51052816 | Msa0360990:CDS | 25.0% |
| ! | TTTCTCTGAATATTACTTAG+AGG | - | chr3_1:51053042-51053061 | Msa0360990:intron | 25.0% |
| ! | TTCTCTGAATATTACTTAGA+GGG | - | chr3_1:51053043-51053062 | Msa0360990:intron | 25.0% |
| ! | GAAGTTAATTTCAGAATGAA+CGG | + | chr3_1:51053339-51053358 | None:intergenic | 25.0% |
| ! | CTAACATTAAAACCTATTAG+AGG | - | chr3_1:51053480-51053499 | Msa0360990:intron | 25.0% |
| ! | ATGAGAACAATAAGATTAGT+AGG | - | chr3_1:51053880-51053899 | Msa0360990:intron | 25.0% |
| ! | TGAGAACAATAAGATTAGTA+GGG | - | chr3_1:51053881-51053900 | Msa0360990:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr3_1:51053987-51054006 | None:intergenic | 25.0% |
| ! | TCTTAAATTATTAACGGTGT+CGG | - | chr3_1:51054018-51054037 | Msa0360990:intron | 25.0% |
| ! | TGAATTGGAAGAAAATTTCA+TGG | - | chr3_1:51054318-51054337 | Msa0360990:intron | 25.0% |
| !!! | ATTGCTTTTTTATTCGTTTC+AGG | - | chr3_1:51054506-51054525 | Msa0360990:intron | 25.0% |
| ! | TTTCTTTAATATAGGTAACG+AGG | - | chr3_1:51055163-51055182 | Msa0360990:intron | 25.0% |
| ! | TTAAACCAAAATATTGTCAC+AGG | + | chr3_1:51055481-51055500 | None:intergenic | 25.0% |
| ! | GTAATTAGATTCTACTTCTT+AGG | + | chr3_1:51055507-51055526 | None:intergenic | 25.0% |
| !!! | GACATTATTTCTTTTGTTGA+AGG | - | chr3_1:51055586-51055605 | Msa0360990:intron | 25.0% |
| !! | TTGATGTCTTTTATTCTTTG+TGG | - | chr3_1:51055692-51055711 | Msa0360990:intron | 25.0% |
| ! | TGAAATGGTTACTTGAAAAA+AGG | + | chr3_1:51055735-51055754 | None:intergenic | 25.0% |
| ! | TATGTCCAAGTGTTTATATT+TGG | - | chr3_1:51055812-51055831 | Msa0360990:intron | 25.0% |
| ! | AGTAATGATATGAACTATGA+GGG | + | chr3_1:51056218-51056237 | None:intergenic | 25.0% |
| !! | GTTTGTAAAATTTTGCTTTC+AGG | - | chr3_1:51056254-51056273 | Msa0360990:intron | 25.0% |
| ! | AATAAATAAAACATCACGCA+CGG | + | chr3_1:51056401-51056420 | None:intergenic | 25.0% |
| ! | GATATTATTTGGAAAGAACT+AGG | + | chr3_1:51056567-51056586 | None:intergenic | 25.0% |
| ! | AAAATTGGAATCAGAATTAC+TGG | - | chr3_1:51056691-51056710 | Msa0360990:CDS | 25.0% |
| ! | TTCACATTATCATAGATAAC+AGG | - | chr3_1:51056812-51056831 | Msa0360990:five_prime_UTR | 25.0% |
| ! | GATAGTACAATAGAAAGTAA+AGG | + | chr3_1:51056848-51056867 | None:intergenic | 25.0% |
| !! | TTGGAATATAACGTTGATTC+TGG | + | chr3_1:51050910-51050929 | None:intergenic | 30.0% |
| ATTAGAACACACAACAAGTT+TGG | + | chr3_1:51050929-51050948 | None:intergenic | 30.0% | |
| ACCAGAAATGAACAAATTGA+TGG | - | chr3_1:51051118-51051137 | Msa0360990:intron | 30.0% | |
| ! | ACCATCAATTTGTTCATTTC+TGG | + | chr3_1:51051122-51051141 | None:intergenic | 30.0% |
| GCTTGTGTTTATTGGATTTA+TGG | - | chr3_1:51051189-51051208 | Msa0360990:three_prime_UTR | 30.0% | |
| !!! | ATTTTTGGTGTATGCCAAAA+GGG | - | chr3_1:51051221-51051240 | Msa0360990:three_prime_UTR | 30.0% |
| TATGAAACACATATACTCCT+CGG | - | chr3_1:51051334-51051353 | Msa0360990:three_prime_UTR | 30.0% | |
| GATCGAATATAACTGCATAA+AGG | - | chr3_1:51051508-51051527 | Msa0360990:intron | 30.0% | |
| ACTCTTTCAATCATAAGTGT+TGG | - | chr3_1:51051548-51051567 | Msa0360990:intron | 30.0% | |
| GGTGCTAAAATATACTCATA+TGG | - | chr3_1:51051569-51051588 | Msa0360990:intron | 30.0% | |
| ! | CACTCTTAAGGTTTAGAATT+TGG | - | chr3_1:51051693-51051712 | Msa0360990:intron | 30.0% |
| ! | TAATACTTTGAAAAAGGGGT+TGG | - | chr3_1:51051716-51051735 | Msa0360990:intron | 30.0% |
| TATGAAAACCTGTTATGTCA+TGG | - | chr3_1:51051853-51051872 | Msa0360990:intron | 30.0% | |
| TTCTCTTTGATCACTAAGAT+TGG | + | chr3_1:51051925-51051944 | None:intergenic | 30.0% | |
| ! | ACTTGTGATTTGTAAGTTTC+AGG | - | chr3_1:51051996-51052015 | Msa0360990:intron | 30.0% |
| GGTTCATTCATGATATCATT+TGG | - | chr3_1:51052135-51052154 | Msa0360990:intron | 30.0% | |
| GCTACCATAAAATATATACC+TGG | + | chr3_1:51052355-51052374 | None:intergenic | 30.0% | |
| CGTTCAACTGCTAAAATTAT+TGG | - | chr3_1:51052378-51052397 | Msa0360990:intron | 30.0% | |
| ! | AATGGATATGTTGGTTGAAT+GGG | - | chr3_1:51052479-51052498 | Msa0360990:intron | 30.0% |
| AATGCATTTCAATTTACCTC+TGG | + | chr3_1:51052526-51052545 | None:intergenic | 30.0% | |
| TAACCACTATTTAACAACAC+TGG | + | chr3_1:51052626-51052645 | None:intergenic | 30.0% | |
| TTGAACAAATCGCTATTGTT+TGG | - | chr3_1:51052679-51052698 | Msa0360990:intron | 30.0% | |
| !!! | GACAAAATTTTGGCTAAGAT+AGG | - | chr3_1:51052796-51052815 | Msa0360990:CDS | 30.0% |
| TAACATATTCTTGCAGACTA+AGG | - | chr3_1:51053080-51053099 | Msa0360990:intron | 30.0% | |
| ATTTCAGAATGAACGGTAAT+TGG | + | chr3_1:51053332-51053351 | None:intergenic | 30.0% | |
| AATGTTAGAACTGTTTCAAC+AGG | + | chr3_1:51053468-51053487 | None:intergenic | 30.0% | |
| !!! | TCTGACTAGATTTTTTCTCA+GGG | - | chr3_1:51053530-51053549 | Msa0360990:intron | 30.0% |
| GTGCATTATAACTAATGCTT+GGG | - | chr3_1:51053609-51053628 | Msa0360990:intron | 30.0% | |
| ATTCTATACAAAGAGACAGA+GGG | + | chr3_1:51053649-51053668 | None:intergenic | 30.0% | |
| TTGATACAAAGAGGACATTT+GGG | + | chr3_1:51053672-51053691 | None:intergenic | 30.0% | |
| !! | AGCTTTAAAATGCAATGCTT+TGG | - | chr3_1:51053822-51053841 | Msa0360990:intron | 30.0% |
| !! | GCTTTAAAATGCAATGCTTT+GGG | - | chr3_1:51053823-51053842 | Msa0360990:intron | 30.0% |
| !! | CTTTAAAATGCAATGCTTTG+GGG | - | chr3_1:51053824-51053843 | Msa0360990:intron | 30.0% |
| ACCTAATTGTATCATCAAAC+CGG | + | chr3_1:51054200-51054219 | None:intergenic | 30.0% | |
| ! | GTTTGATGATACAATTAGGT+GGG | - | chr3_1:51054200-51054219 | Msa0360990:intron | 30.0% |
| ATATGACTGTAAATGCACAT+GGG | - | chr3_1:51054228-51054247 | Msa0360990:intron | 30.0% | |
| ATTTCATGGCCTTTAATCAT+AGG | - | chr3_1:51054332-51054351 | Msa0360990:intron | 30.0% | |
| CCTATGATTCCTATGATTAA+AGG | + | chr3_1:51054344-51054363 | None:intergenic | 30.0% | |
| CCTTTAATCATAGGAATCAT+AGG | - | chr3_1:51054341-51054360 | Msa0360990:intron | 30.0% | |
| TGCGAAACTTATTCATGAAT+TGG | - | chr3_1:51054385-51054404 | Msa0360990:intron | 30.0% | |
| TCTCTGTATAGAACTAAACT+TGG | + | chr3_1:51054721-51054740 | None:intergenic | 30.0% | |
| !!! | TGCATAAAACTTTTCAAGTC+TGG | + | chr3_1:51054948-51054967 | None:intergenic | 30.0% |
| AACTTGAATCACACATATAC+TGG | - | chr3_1:51055083-51055102 | Msa0360990:intron | 30.0% | |
| AAGGAAAAAAGACATGAGAA+AGG | + | chr3_1:51055372-51055391 | None:intergenic | 30.0% | |
| ATAGAGCGAAGAAACATATA+TGG | + | chr3_1:51055643-51055662 | None:intergenic | 30.0% | |
| TATATGCTCGTTCATAAATC+TGG | - | chr3_1:51056128-51056147 | Msa0360990:intron | 30.0% | |
| GAGTAATGATATGAACTATG+AGG | + | chr3_1:51056219-51056238 | None:intergenic | 30.0% | |
| AACCTGAAATGGCAAAAAAT+TGG | - | chr3_1:51056676-51056695 | Msa0360990:CDS | 30.0% | |
| !!! | TTCCAATTTTTTGCCATTTC+AGG | + | chr3_1:51056681-51056700 | None:intergenic | 30.0% |
| GTCTGAAAATATGGATGTAT+TGG | - | chr3_1:51056725-51056744 | Msa0360990:exon | 30.0% | |
| ACAATCTTATCCATATCACT+TGG | - | chr3_1:51056757-51056776 | Msa0360990:five_prime_UTR | 30.0% | |
| ACTATCCTCTTATATATCTC+AGG | - | chr3_1:51056862-51056881 | Msa0360990:five_prime_UTR | 30.0% | |
| ATCTATGTGTGTGAGAAACA+GGG | + | chr3_1:51050884-51050903 | None:intergenic | 35.0% | |
| GGGGTAAAGAAATTCAATTG+TGG | + | chr3_1:51050993-51051012 | None:intergenic | 35.0% | |
| !!! | GATTTTTGGTGTATGCCAAA+AGG | - | chr3_1:51051220-51051239 | Msa0360990:three_prime_UTR | 35.0% |
| TATCAGTGTCGTGTCTAATT+GGG | + | chr3_1:51051304-51051323 | None:intergenic | 35.0% | |
| ! | GAGGAGTATATGTGTTTCAT+AGG | + | chr3_1:51051335-51051354 | None:intergenic | 35.0% |
| ATGAAACACATATACTCCTC+GGG | - | chr3_1:51051335-51051354 | Msa0360990:three_prime_UTR | 35.0% | |
| TCCAATGTAATCACATGTGT+CGG | + | chr3_1:51051379-51051398 | None:intergenic | 35.0% | |
| CTTCATAAGTAGACTCTGAT+AGG | - | chr3_1:51051466-51051485 | Msa0360990:CDS | 35.0% | |
| ! | ATAACTGCATAAAGGTGTGT+TGG | - | chr3_1:51051516-51051535 | Msa0360990:intron | 35.0% |
| ATATTCTACGGTCACTCTTA+AGG | - | chr3_1:51051681-51051700 | Msa0360990:intron | 35.0% | |
| AAGGTCGTAGTATGTAGTAA+TGG | - | chr3_1:51051757-51051776 | Msa0360990:intron | 35.0% | |
| AATATGAGCCATGACATAAC+AGG | + | chr3_1:51051864-51051883 | None:intergenic | 35.0% | |
| TTATGTCATGGCTCATATTG+AGG | - | chr3_1:51051865-51051884 | Msa0360990:intron | 35.0% | |
| ! | TCAGGACCTTTATTTAAACC+TGG | - | chr3_1:51051888-51051907 | Msa0360990:intron | 35.0% |
| ! | CAGGACCTTTATTTAAACCT+GGG | - | chr3_1:51051889-51051908 | Msa0360990:intron | 35.0% |
| ! | AGGACCTTTATTTAAACCTG+GGG | - | chr3_1:51051890-51051909 | Msa0360990:intron | 35.0% |
| TTGATCACTAAGATTGGACT+AGG | + | chr3_1:51051919-51051938 | None:intergenic | 35.0% | |
| TATATACCTGGAATGGATGT+AGG | + | chr3_1:51052343-51052362 | None:intergenic | 35.0% | |
| ! | GAATGGATATGTTGGTTGAA+TGG | - | chr3_1:51052478-51052497 | Msa0360990:intron | 35.0% |
| !! | TTTCAATTTACCTCTGGAGT+TGG | + | chr3_1:51052520-51052539 | None:intergenic | 35.0% |
| ! | TAGCCAGTGTTGTTAAATAG+TGG | - | chr3_1:51052620-51052639 | Msa0360990:intron | 35.0% |
| TAGTGGTTATAGCATAGCAT+AGG | - | chr3_1:51052734-51052753 | Msa0360990:intron | 35.0% | |
| AGTGGTTATAGCATAGCATA+GGG | - | chr3_1:51052735-51052754 | Msa0360990:intron | 35.0% | |
| TCGCAGATTTCAGAAAATAG+CGG | + | chr3_1:51052939-51052958 | None:intergenic | 35.0% | |
| GAATATTACTTAGAGGGCAA+TGG | - | chr3_1:51053049-51053068 | Msa0360990:intron | 35.0% | |
| !!! | TATTTTTTGTCTCAACGCTC+TGG | - | chr3_1:51053196-51053215 | Msa0360990:CDS | 35.0% |
| ! | AAGGAAGTTGATTGCAATCA+TGG | - | chr3_1:51053261-51053280 | Msa0360990:intron | 35.0% |
| !! | TGTTTCAACAGGATTTGCTA+CGG | + | chr3_1:51053457-51053476 | None:intergenic | 35.0% |
| !!! | GTCTGACTAGATTTTTTCTC+AGG | - | chr3_1:51053529-51053548 | Msa0360990:intron | 35.0% |
| !!! | CTGACTAGATTTTTTCTCAG+GGG | - | chr3_1:51053531-51053550 | Msa0360990:intron | 35.0% |
| TGAACTGAGGAAAGTTATGA+AGG | + | chr3_1:51053583-51053602 | None:intergenic | 35.0% | |
| AACTTTCCTCAGTTCATATG+AGG | - | chr3_1:51053587-51053606 | Msa0360990:intron | 35.0% | |
| GGTGCATTATAACTAATGCT+TGG | - | chr3_1:51053608-51053627 | Msa0360990:intron | 35.0% | |
| TTCTATACAAAGAGACAGAG+GGG | + | chr3_1:51053648-51053667 | None:intergenic | 35.0% | |
| GATTCTATACAAAGAGACAG+AGG | + | chr3_1:51053650-51053669 | None:intergenic | 35.0% | |
| GTTGATACAAAGAGGACATT+TGG | + | chr3_1:51053673-51053692 | None:intergenic | 35.0% | |
| ! | TCCGGTTTGATGATACAATT+AGG | - | chr3_1:51054196-51054215 | Msa0360990:intron | 35.0% |
| ! | GGTTTGATGATACAATTAGG+TGG | - | chr3_1:51054199-51054218 | Msa0360990:intron | 35.0% |
| GATATGACTGTAAATGCACA+TGG | - | chr3_1:51054227-51054246 | Msa0360990:intron | 35.0% | |
| ! | TAGGCATGGATGTGATTTTA+AGG | - | chr3_1:51054261-51054280 | Msa0360990:intron | 35.0% |
| ! | AGGCATGGATGTGATTTTAA+GGG | - | chr3_1:51054262-51054281 | Msa0360990:intron | 35.0% |
| !! | ATGTGATTTTAAGGGTAGCA+TGG | - | chr3_1:51054270-51054289 | Msa0360990:intron | 35.0% |
| TAGGTAGGTGTTTAGTGAAT+TGG | - | chr3_1:51054303-51054322 | Msa0360990:intron | 35.0% | |
| ! | TTGGTTGCTCGATTTTGTAA+TGG | - | chr3_1:51054404-51054423 | Msa0360990:intron | 35.0% |
| ! | TGGTTGCTCGATTTTGTAAT+GGG | - | chr3_1:51054405-51054424 | Msa0360990:intron | 35.0% |
| TTATTCGTTTCAGGAACAGA+TGG | - | chr3_1:51054515-51054534 | Msa0360990:intron | 35.0% | |
| AGTTCTCAAGAAAGAAGAAG+AGG | - | chr3_1:51054771-51054790 | Msa0360990:intron | 35.0% | |
| TCAAGAAAGAAGAAGAGGAA+AGG | - | chr3_1:51054776-51054795 | Msa0360990:intron | 35.0% | |
| !! | AAGTTTTATGCAGCAGTTTC+CGG | - | chr3_1:51054956-51054975 | Msa0360990:intron | 35.0% |
| AACAGTAAGATGACTACCTT+CGG | + | chr3_1:51054988-51055007 | None:intergenic | 35.0% | |
| TCGTTTGATGCATGTTCTTA+TGG | - | chr3_1:51055259-51055278 | Msa0360990:CDS | 35.0% | |
| GCCATTTACTTTGTAGTTTG+TGG | - | chr3_1:51055326-51055345 | Msa0360990:intron | 35.0% | |
| GCCACAAACTACAAAGTAAA+TGG | + | chr3_1:51055330-51055349 | None:intergenic | 35.0% | |
| ! | GTGTTCCTGTGACAATATTT+TGG | - | chr3_1:51055473-51055492 | Msa0360990:intron | 35.0% |
| TAACCATTTCATCTTTCTGC+AGG | - | chr3_1:51055744-51055763 | Msa0360990:intron | 35.0% | |
| AACTATGAGGGTTAGAACTA+GGG | + | chr3_1:51056206-51056225 | None:intergenic | 35.0% | |
| AATCAGAATGAGGCAAAATC+AGG | + | chr3_1:51056372-51056391 | None:intergenic | 35.0% | |
| TCTCAACTGTAAACCTGAAA+TGG | - | chr3_1:51056665-51056684 | Msa0360990:CDS | 35.0% | |
| ACTAATTGCTCCAAGTGATA+TGG | + | chr3_1:51056770-51056789 | None:intergenic | 35.0% | |
| TTGCACCTGAGATATATAAG+AGG | + | chr3_1:51056870-51056889 | None:intergenic | 35.0% | |
| CATCTATGTGTGTGAGAAAC+AGG | + | chr3_1:51050885-51050904 | None:intergenic | 40.0% | |
| !! | ATAAAAATGCGGAGGGTACT+TGG | - | chr3_1:51051028-51051047 | Msa0360990:three_prime_UTR | 40.0% |
| !! | TAAAAATGCGGAGGGTACTT+GGG | - | chr3_1:51051029-51051048 | Msa0360990:three_prime_UTR | 40.0% |
| GTTGTTCACCAATCGAACTA+TGG | - | chr3_1:51051063-51051082 | Msa0360990:intron | 40.0% | |
| ! | GCAATGCAAAAACACCCTTT+TGG | + | chr3_1:51051238-51051257 | None:intergenic | 40.0% |
| GTATCAGTGTCGTGTCTAAT+TGG | + | chr3_1:51051305-51051324 | None:intergenic | 40.0% | |
| ACCGACACATGTGATTACAT+TGG | - | chr3_1:51051375-51051394 | Msa0360990:three_prime_UTR | 40.0% | |
| ! | TACTTTGAAAAAGGGGTTGG+TGG | - | chr3_1:51051719-51051738 | Msa0360990:intron | 40.0% |
| CATCACGATTGCTGATATCT+CGG | - | chr3_1:51051789-51051808 | Msa0360990:intron | 40.0% | |
| GTCAAATGCATCCAAAACTG+TGG | - | chr3_1:51051811-51051830 | Msa0360990:intron | 40.0% | |
| GACACCCCAGGTTTAAATAA+AGG | + | chr3_1:51051897-51051916 | None:intergenic | 40.0% | |
| ! | ATTTTATTCACCTCACTCCG+AGG | - | chr3_1:51051956-51051975 | Msa0360990:intron | 40.0% |
| !! | GCTATTTTCTGCTGCTAGAT+TGG | - | chr3_1:51052114-51052133 | Msa0360990:intron | 40.0% |
| TCCTAGTGAAAGAGAAGAGA+TGG | - | chr3_1:51052293-51052312 | Msa0360990:intron | 40.0% | |
| CCTAGTGAAAGAGAAGAGAT+GGG | - | chr3_1:51052294-51052313 | Msa0360990:intron | 40.0% | |
| AAGAGATGGGTGGTGTTTAA+GGG | - | chr3_1:51052307-51052326 | Msa0360990:intron | 40.0% | |
| AGATAGGGACAACTTTGTAG+CGG | - | chr3_1:51052812-51052831 | Msa0360990:CDS | 40.0% | |
| ! | GGAGTTTGTTCAGAAAACAG+TGG | - | chr3_1:51052833-51052852 | Msa0360990:intron | 40.0% |
| AAATCTGCGATTGCTAACAC+TGG | - | chr3_1:51052949-51052968 | Msa0360990:CDS | 40.0% | |
| TCTTGCAGACTAAGGAAACA+AGG | - | chr3_1:51053088-51053107 | Msa0360990:intron | 40.0% | |
| AAGGAAACAAGGAATGCAGT+AGG | - | chr3_1:51053099-51053118 | Msa0360990:intron | 40.0% | |
| GATTGCAATCAACTTCCTTC+TGG | + | chr3_1:51053260-51053279 | None:intergenic | 40.0% | |
| GGATGTTCGATACCTCTAAT+AGG | + | chr3_1:51053495-51053514 | None:intergenic | 40.0% | |
| AATGCACCTCATATGAACTG+AGG | + | chr3_1:51053596-51053615 | None:intergenic | 40.0% | |
| !! | ATGGTGGTGCAACTTTTATG+AGG | + | chr3_1:51053747-51053766 | None:intergenic | 40.0% |
| TGTCCATATCTGTGCTTCAT+AGG | - | chr3_1:51054055-51054074 | Msa0360990:intron | 40.0% | |
| GTCCATATCTGTGCTTCATA+GGG | - | chr3_1:51054056-51054075 | Msa0360990:intron | 40.0% | |
| TCCATATCTGTGCTTCATAG+GGG | - | chr3_1:51054057-51054076 | Msa0360990:intron | 40.0% | |
| TCCATGTATCACTTCATCCT+TGG | - | chr3_1:51054142-51054161 | Msa0360990:intron | 40.0% | |
| ACCAAGGATGAAGTGATACA+TGG | + | chr3_1:51054146-51054165 | None:intergenic | 40.0% | |
| TATCACTTCATCCTTGGTGA+TGG | - | chr3_1:51054148-51054167 | Msa0360990:intron | 40.0% | |
| !! | GATTTTAAGGGTAGCATGGT+TGG | - | chr3_1:51054274-51054293 | Msa0360990:intron | 40.0% |
| ! | GGTTGCTCGATTTTGTAATG+GGG | - | chr3_1:51054406-51054425 | Msa0360990:intron | 40.0% |
| GTTTCAGGAACAGATGGAAT+TGG | - | chr3_1:51054521-51054540 | Msa0360990:intron | 40.0% | |
| ATGAGAACCATCTCATGCAA+CGG | + | chr3_1:51054674-51054693 | None:intergenic | 40.0% | |
| ATACTTGTGACTGTGTACTC+TGG | - | chr3_1:51055559-51055578 | Msa0360990:intron | 40.0% | |
| ATTCCAAAACAACAGCACTG+AGG | + | chr3_1:51055620-51055639 | None:intergenic | 40.0% | |
| ACTCCTGCAGAAAGATGAAA+TGG | + | chr3_1:51055750-51055769 | None:intergenic | 40.0% | |
| GAACTATGAGGGTTAGAACT+AGG | + | chr3_1:51056207-51056226 | None:intergenic | 40.0% | |
| ! | TCAGGTGCATCTTTTAAACC+TGG | - | chr3_1:51056295-51056314 | Msa0360990:intron | 40.0% |
| ! | CATCTTTTAAACCTGGAACC+TGG | - | chr3_1:51056302-51056321 | Msa0360990:intron | 40.0% |
| TGAGGCAAAATCAGGAATGT+TGG | + | chr3_1:51056364-51056383 | None:intergenic | 40.0% | |
| ! | ACGGTTTTCGAATCAGAATG+AGG | + | chr3_1:51056382-51056401 | None:intergenic | 40.0% |
| TGGTCATATTCGTCGAACAA+AGG | + | chr3_1:51056490-51056509 | None:intergenic | 40.0% | |
| ! | AGGGTACTTGGGAAGATTAC+TGG | - | chr3_1:51051040-51051059 | Msa0360990:intron | 45.0% |
| GGGTACTTGGGAAGATTACT+GGG | - | chr3_1:51051041-51051060 | Msa0360990:intron | 45.0% | |
| TTCACCAATCGAACTATGGC+TGG | - | chr3_1:51051067-51051086 | Msa0360990:intron | 45.0% | |
| ATGGCTGGTGTGGATAAAAC+TGG | - | chr3_1:51051082-51051101 | Msa0360990:intron | 45.0% | |
| TGGCTGGTGTGGATAAAACT+GGG | - | chr3_1:51051083-51051102 | Msa0360990:intron | 45.0% | |
| ACACATATACTCCTCGGGTT+TGG | - | chr3_1:51051340-51051359 | Msa0360990:three_prime_UTR | 45.0% | |
| AAATGCTGAGCTTGTGAGAC+TGG | - | chr3_1:51051620-51051639 | Msa0360990:intron | 45.0% | |
| GTGGTGAAACTCTTGTGGTA+AGG | - | chr3_1:51051738-51051757 | Msa0360990:intron | 45.0% | |
| ! | CCACAATGCAACCACAGTTT+TGG | + | chr3_1:51051825-51051844 | None:intergenic | 45.0% |
| CCAAAACTGTGGTTGCATTG+TGG | - | chr3_1:51051822-51051841 | Msa0360990:intron | 45.0% | |
| ! | CTGTGGTTGCATTGTGGTTT+TGG | - | chr3_1:51051828-51051847 | Msa0360990:intron | 45.0% |
| TCATGGCTCATATTGAGGTC+AGG | - | chr3_1:51051870-51051889 | Msa0360990:intron | 45.0% | |
| ! | TTCAGGTGTTATGCTCCACT+TGG | - | chr3_1:51052013-51052032 | Msa0360990:intron | 45.0% |
| !! | ATTCAATAGGGTTGGCCAAG+TGG | + | chr3_1:51052031-51052050 | None:intergenic | 45.0% |
| CCCATCTCTTCTCTTTCACT+AGG | + | chr3_1:51052297-51052316 | None:intergenic | 45.0% | |
| AGTGAAAGAGAAGAGATGGG+TGG | - | chr3_1:51052297-51052316 | Msa0360990:intron | 45.0% | |
| GAAGAGATGGGTGGTGTTTA+AGG | - | chr3_1:51052306-51052325 | Msa0360990:intron | 45.0% | |
| CATGATCCTACATCCATTCC+AGG | - | chr3_1:51052334-51052353 | Msa0360990:intron | 45.0% | |
| GTTGAATGGGCAGCGTAAAA+GGG | - | chr3_1:51052492-51052511 | Msa0360990:intron | 45.0% | |
| CACTAGTCACTACTGAGTAG+CGG | - | chr3_1:51052901-51052920 | Msa0360990:intron | 45.0% | |
| GGTCGAATTCCGGATTACTA+GGG | + | chr3_1:51053239-51053258 | None:intergenic | 45.0% | |
| TGGTCGAATTCCGGATTACT+AGG | + | chr3_1:51053240-51053259 | None:intergenic | 45.0% | |
| TAATCCGGAATTCGACCAGA+AGG | - | chr3_1:51053242-51053261 | Msa0360990:intron | 45.0% | |
| ACTTCCTTCTGGTCGAATTC+CGG | + | chr3_1:51053249-51053268 | None:intergenic | 45.0% | |
| !! | TTCAACAGGATTTGCTACGG+TGG | + | chr3_1:51053454-51053473 | None:intergenic | 45.0% |
| !! | TTAGAGGTATCGAACATCCG+TGG | - | chr3_1:51053496-51053515 | Msa0360990:intron | 45.0% |
| TATCGAACATCCGTGGCATT+AGG | - | chr3_1:51053503-51053522 | Msa0360990:intron | 45.0% | |
| GTCAGACTTACCTAATGCCA+CGG | + | chr3_1:51053516-51053535 | None:intergenic | 45.0% | |
| ! | CAAGTTGAAGAATTCGCCCA+TGG | - | chr3_1:51053710-51053729 | Msa0360990:intron | 45.0% |
| TGAGGTCACAGTCAATCCAT+GGG | + | chr3_1:51053729-51053748 | None:intergenic | 45.0% | |
| ATGAGGTCACAGTCAATCCA+TGG | + | chr3_1:51053730-51053749 | None:intergenic | 45.0% | |
| !! | TGCAATGCTTTGGGGATGTT+TGG | - | chr3_1:51053832-51053851 | Msa0360990:intron | 45.0% |
| !! | TATATGTGTCGGTGTCGTGT+CGG | + | chr3_1:51053976-51053995 | None:intergenic | 45.0% |
| TCCCCTATGAAGCACAGATA+TGG | + | chr3_1:51054061-51054080 | None:intergenic | 45.0% | |
| !! | TCATCCTTGGTGATGGTCAT+CGG | - | chr3_1:51054155-51054174 | Msa0360990:intron | 45.0% |
| GACTGTAAATGCACATGGGT+TGG | - | chr3_1:51054232-51054251 | Msa0360990:intron | 45.0% | |
| GTAGCATGGTTGGAGACATT+AGG | - | chr3_1:51054284-51054303 | Msa0360990:intron | 45.0% | |
| CATGGTTGGAGACATTAGGT+AGG | - | chr3_1:51054288-51054307 | Msa0360990:intron | 45.0% | |
| GAGGAAAGGAAAGCCAAAGA+AGG | - | chr3_1:51054790-51054809 | Msa0360990:intron | 45.0% | |
| CCTGACTCTACTTCCTTCTT+TGG | + | chr3_1:51054806-51054825 | None:intergenic | 45.0% | |
| CCAAAGAAGGAAGTAGAGTC+AGG | - | chr3_1:51054803-51054822 | Msa0360990:intron | 45.0% | |
| TCCATTGTAGGAAACGCTAG+TGG | - | chr3_1:51054921-51054940 | Msa0360990:intron | 45.0% | |
| ACCACTAGCGTTTCCTACAA+TGG | + | chr3_1:51054925-51054944 | None:intergenic | 45.0% | |
| TGACTACCTTCGGAAGAAAC+CGG | + | chr3_1:51054978-51054997 | None:intergenic | 45.0% | |
| AACGAGGTTGAAGAATCACC+TGG | - | chr3_1:51055179-51055198 | Msa0360990:intron | 45.0% | |
| TTGAAGAATCACCTGGCACA+AGG | - | chr3_1:51055186-51055205 | Msa0360990:intron | 45.0% | |
| TGAAGAATCACCTGGCACAA+GGG | - | chr3_1:51055187-51055206 | Msa0360990:intron | 45.0% | |
| !! | GAACCTCAGTGCTGTTGTTT+TGG | - | chr3_1:51055614-51055633 | Msa0360990:intron | 45.0% |
| !! | CAGGAATGTTGGTGTCAGTA+AGG | + | chr3_1:51056353-51056372 | None:intergenic | 45.0% |
| ! | AACGCGTCAAGTTGTCATTG+TGG | + | chr3_1:51056510-51056529 | None:intergenic | 45.0% |
| TACAGTTGAGACTCAGGCAA+GGG | + | chr3_1:51056656-51056675 | None:intergenic | 45.0% | |
| TTACAGTTGAGACTCAGGCA+AGG | + | chr3_1:51056657-51056676 | None:intergenic | 45.0% | |
| CAGGTTTACAGTTGAGACTC+AGG | + | chr3_1:51056662-51056681 | None:intergenic | 45.0% | |
| !!! | TTTATTTATTTATTTTATTG+GGG | + | chr3_1:51051013-51051032 | None:intergenic | 5.0% |
| !! | AAAATAAATAAATAAAAATG+CGG | - | chr3_1:51051017-51051036 | Msa0360990:three_prime_UTR | 5.0% |
| !!! | ATCATAAATAAAATTATTTT+TGG | - | chr3_1:51054695-51054714 | Msa0360990:intron | 5.0% |
| !!! | TTACTAAAAAAAATATATTT+TGG | - | chr3_1:51055850-51055869 | Msa0360990:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+AGG | - | chr3_1:51056013-51056032 | Msa0360990:intron | 5.0% |
| GTGGTACAGTGACAGCATCA+TGG | + | chr3_1:51050974-51050993 | None:intergenic | 50.0% | |
| CACACCAGCCATAGTTCGAT+TGG | + | chr3_1:51051074-51051093 | None:intergenic | 50.0% | |
| CAATCGAACTATGGCTGGTG+TGG | - | chr3_1:51051072-51051091 | Msa0360990:intron | 50.0% | |
| TGAGACTGGTGGGAAAGACA+AGG | - | chr3_1:51051634-51051653 | Msa0360990:intron | 50.0% | |
| !! | GGTTGGTGGTGAAACTCTTG+TGG | - | chr3_1:51051733-51051752 | Msa0360990:intron | 50.0% |
| TCAAACCCCCACTATCTCCT+CGG | + | chr3_1:51051976-51051995 | None:intergenic | 50.0% | |
| GGTTGAATGGGCAGCGTAAA+AGG | - | chr3_1:51052491-51052510 | Msa0360990:intron | 50.0% | |
| TAAAAGGGCTCCAACTCCAG+AGG | - | chr3_1:51052507-51052526 | Msa0360990:intron | 50.0% | |
| ! | TCTCAACGCTCTGGTTCCTA+TGG | - | chr3_1:51053205-51053224 | Msa0360990:CDS | 50.0% |
| ! | CTCAACGCTCTGGTTCCTAT+GGG | - | chr3_1:51053206-51053225 | Msa0360990:CDS | 50.0% |
| ! | GCTCTGGTTCCTATGGGAAA+GGG | - | chr3_1:51053212-51053231 | Msa0360990:CDS | 50.0% |
| TACTAGGGTCCCTTTCCCAT+AGG | + | chr3_1:51053224-51053243 | None:intergenic | 50.0% | |
| GGAAAGGGACCCTAGTAATC+CGG | - | chr3_1:51053227-51053246 | Msa0360990:intron | 50.0% | |
| AGCCCCTTCTTGCTTAACGA+AGG | - | chr3_1:51053783-51053802 | Msa0360990:intron | 50.0% | |
| GCCCCTTCTTGCTTAACGAA+GGG | - | chr3_1:51053784-51053803 | Msa0360990:intron | 50.0% | |
| CCCCTTCGTTAAGCAAGAAG+GGG | + | chr3_1:51053788-51053807 | None:intergenic | 50.0% | |
| CCCCTTCTTGCTTAACGAAG+GGG | - | chr3_1:51053785-51053804 | Msa0360990:intron | 50.0% | |
| CCCCCTTCGTTAAGCAAGAA+GGG | + | chr3_1:51053789-51053808 | None:intergenic | 50.0% | |
| CCCTTCTTGCTTAACGAAGG+GGG | - | chr3_1:51053786-51053805 | Msa0360990:intron | 50.0% | |
| TCCCCCTTCGTTAAGCAAGA+AGG | + | chr3_1:51053790-51053809 | None:intergenic | 50.0% | |
| TGCTTAACGAAGGGGGACAA+TGG | - | chr3_1:51053793-51053812 | Msa0360990:intron | 50.0% | |
| GCTTAACGAAGGGGGACAAT+GGG | - | chr3_1:51053794-51053813 | Msa0360990:intron | 50.0% | |
| ACATGTTCGACACTGGGACA+CGG | + | chr3_1:51053934-51053953 | None:intergenic | 50.0% | |
| CACGACACATGTTCGACACT+GGG | + | chr3_1:51053940-51053959 | None:intergenic | 50.0% | |
| ACACGACACATGTTCGACAC+TGG | + | chr3_1:51053941-51053960 | None:intergenic | 50.0% | |
| GCTTCATAGGGGAGACTTGA+AGG | - | chr3_1:51054068-51054087 | Msa0360990:intron | 50.0% | |
| TCAACCGATGACCATCACCA+AGG | + | chr3_1:51054162-51054181 | None:intergenic | 50.0% | |
| !! | GCACATGGGTTGGACTTTGT+AGG | - | chr3_1:51054242-51054261 | Msa0360990:intron | 50.0% |
| ! | TGGGTTGGACTTTGTAGGCA+TGG | - | chr3_1:51054247-51054266 | Msa0360990:intron | 50.0% |
| TTTGTCGCCGTTGCATGAGA+TGG | - | chr3_1:51054664-51054683 | Msa0360990:intron | 50.0% | |
| CAGTTTCCGGTTTCTTCCGA+AGG | - | chr3_1:51054969-51054988 | Msa0360990:intron | 50.0% | |
| CACAAGGGATGACTTGAGGT+TGG | - | chr3_1:51055202-51055221 | Msa0360990:intron | 50.0% | |
| TTTGTGCGCGTGTCTGTGTT+CGG | + | chr3_1:51055296-51055315 | None:intergenic | 50.0% | |
| TTCAGGACTTCAGAGCCAAC+TGG | - | chr3_1:51056271-51056290 | Msa0360990:intron | 50.0% | |
| TCAGGACTTCAGAGCCAACT+GGG | - | chr3_1:51056272-51056291 | Msa0360990:intron | 50.0% | |
| AAAGATGCACCTGACCCAGT+TGG | + | chr3_1:51056289-51056308 | None:intergenic | 50.0% | |
| AAGGTCCTCCCAGATCAAGT+TGG | + | chr3_1:51056334-51056353 | None:intergenic | 50.0% | |
| CAAAGGTGACCTTGCAAGCA+AGG | - | chr3_1:51056629-51056648 | Msa0360990:CDS | 50.0% | |
| TGCTGAGCTTGTGAGACTGG+TGG | - | chr3_1:51051623-51051642 | Msa0360990:intron | 55.0% | |
| GCTGAGCTTGTGAGACTGGT+GGG | - | chr3_1:51051624-51051643 | Msa0360990:intron | 55.0% | |
| ! | AGATTGGACTAGGACACCCC+AGG | + | chr3_1:51051909-51051928 | None:intergenic | 55.0% |
| ACCTCACTCCGAGGAGATAG+TGG | - | chr3_1:51051965-51051984 | Msa0360990:CDS | 55.0% | |
| CCTCACTCCGAGGAGATAGT+GGG | - | chr3_1:51051966-51051985 | Msa0360990:CDS | 55.0% | |
| CTCACTCCGAGGAGATAGTG+GGG | - | chr3_1:51051967-51051986 | Msa0360990:CDS | 55.0% | |
| ! | TCACTCCGAGGAGATAGTGG+GGG | - | chr3_1:51051968-51051987 | Msa0360990:CDS | 55.0% |
| ! | CGCTCTGGTTCCTATGGGAA+AGG | - | chr3_1:51053211-51053230 | Msa0360990:CDS | 55.0% |
| CTCAAGTCATCCCTTGTGCC+AGG | + | chr3_1:51055200-51055219 | None:intergenic | 55.0% | |
| CTGGCACAAGGGATGACTTG+AGG | - | chr3_1:51055198-51055217 | Msa0360990:intron | 55.0% | |
| ACTTCAGAGCCAACTGGGTC+AGG | - | chr3_1:51056277-51056296 | Msa0360990:intron | 55.0% | |
| !! | AGATCAAGTTGGAGGCTGCC+AGG | + | chr3_1:51056323-51056342 | None:intergenic | 55.0% |
| TGGCAGCCTCCAACTTGATC+TGG | - | chr3_1:51056322-51056341 | Msa0360990:intron | 55.0% | |
| GGCAGCCTCCAACTTGATCT+GGG | - | chr3_1:51056323-51056342 | Msa0360990:intron | 55.0% | |
| AGCCTCCAACTTGATCTGGG+AGG | - | chr3_1:51056326-51056345 | Msa0360990:intron | 55.0% | |
| !! | GTCCTCCCAGATCAAGTTGG+AGG | + | chr3_1:51056331-51056350 | None:intergenic | 55.0% |
| TCAGACACACGCCAAACCCG+AGG | + | chr3_1:51051354-51051373 | None:intergenic | 60.0% | |
| CCCACTATCTCCTCGGAGTG+AGG | + | chr3_1:51051969-51051988 | None:intergenic | 60.0% | |
| !! | TGTCGTGTCGGTGTCGGTGT+CGG | + | chr3_1:51053964-51053983 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr3_1:51053970-51053989 | None:intergenic | 60.0% |
| GTCAGGCGTGTCGTCAACAC+TGG | - | chr3_1:51054820-51054839 | Msa0360990:intron | 60.0% | |
| CGTGTCTGTGTTCGGAGTGG+GGG | + | chr3_1:51055288-51055307 | None:intergenic | 60.0% | |
| GCGTGTCTGTGTTCGGAGTG+GGG | + | chr3_1:51055289-51055308 | None:intergenic | 60.0% | |
| CGCGTGTCTGTGTTCGGAGT+GGG | + | chr3_1:51055290-51055309 | None:intergenic | 60.0% | |
| GGCAAGGGTCCTTGCTTGCA+AGG | + | chr3_1:51056641-51056660 | None:intergenic | 60.0% | |
| GCGCGTGTCTGTGTTCGGAG+TGG | + | chr3_1:51055291-51055310 | None:intergenic | 65.0% | |
| GTTGGAGGCTGCCAGGTTCC+AGG | + | chr3_1:51056316-51056335 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 51050839 | 51056928 | 51050839 | ID=Msa0360990;Name=Msa0360990 |
| chr3_1 | mRNA | 51050839 | 51056928 | 51050839 | ID=Msa0360990-mRNA-1;Parent=Msa0360990;Name=Msa0360990-mRNA-1;_AED=0.39;_eAED=0.39;_QI=195|1|1|1|0.88|0.8|10|516|184 |
| chr3_1 | exon | 51050839 | 51051048 | 51050839 | ID=Msa0360990-mRNA-1:exon:9064;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51051122 | 51051491 | 51051122 | ID=Msa0360990-mRNA-1:exon:9063;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51051957 | 51052001 | 51051957 | ID=Msa0360990-mRNA-1:exon:9062;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51052548 | 51052590 | 51052548 | ID=Msa0360990-mRNA-1:exon:9061;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51052777 | 51052836 | 51052777 | ID=Msa0360990-mRNA-1:exon:9060;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51052926 | 51052994 | 51052926 | ID=Msa0360990-mRNA-1:exon:9059;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51053188 | 51053239 | 51053188 | ID=Msa0360990-mRNA-1:exon:9058;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51055239 | 51055291 | 51055239 | ID=Msa0360990-mRNA-1:exon:9057;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51055412 | 51055468 | 51055412 | ID=Msa0360990-mRNA-1:exon:9056;Parent=Msa0360990-mRNA-1 |
| chr3_1 | exon | 51056622 | 51056928 | 51056622 | ID=Msa0360990-mRNA-1:exon:9055;Parent=Msa0360990-mRNA-1 |
| chr3_1 | five_prime_UTR | 51056734 | 51056928 | 51056734 | ID=Msa0360990-mRNA-1:five_prime_utr;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51056622 | 51056733 | 51056622 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51055412 | 51055468 | 51055412 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51055239 | 51055291 | 51055239 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51053188 | 51053239 | 51053188 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51052926 | 51052994 | 51052926 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51052777 | 51052836 | 51052777 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51052548 | 51052590 | 51052548 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51051957 | 51052001 | 51051957 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | CDS | 51051428 | 51051491 | 51051428 | ID=Msa0360990-mRNA-1:cds;Parent=Msa0360990-mRNA-1 |
| chr3_1 | three_prime_UTR | 51051122 | 51051427 | 51051122 | ID=Msa0360990-mRNA-1:three_prime_utr;Parent=Msa0360990-mRNA-1 |
| chr3_1 | three_prime_UTR | 51050839 | 51051048 | 51050839 | ID=Msa0360990-mRNA-1:three_prime_utr;Parent=Msa0360990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
