Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0818630 | XP_003616676.2 | 95.585 | 521 | 14 | 3 | 1 | 513 | 1 | 520 | 0.0 | 1017 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0818630 | sp|Q6P806|SAM50_XENTR | 27.494 | 451 | 274 | 15 | 54 | 487 | 29 | 443 | 3.60e-29 | 123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0818630 | G7K274 | 95.585 | 521 | 14 | 3 | 1 | 513 | 1 | 520 | 0.0 | 1017 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003220 | Msa0818630 | 0.804291 | 2.317647e-49 | -8.615850e-47 |
Msa0003720 | Msa0818630 | 0.808826 | 2.558400e-50 | -8.615850e-47 |
Msa0004540 | Msa0818630 | 0.809589 | 1.756300e-50 | -8.615850e-47 |
Msa0007970 | Msa0818630 | 0.818531 | 1.867536e-52 | -8.615850e-47 |
Msa0010020 | Msa0818630 | 0.803357 | 3.622645e-49 | -8.615850e-47 |
Msa0010770 | Msa0818630 | 0.823407 | 1.408334e-53 | -8.615850e-47 |
Msa0012220 | Msa0818630 | 0.800456 | 1.428870e-48 | -8.615850e-47 |
Msa0012940 | Msa0818630 | 0.823650 | 1.235502e-53 | -8.615850e-47 |
Msa0026150 | Msa0818630 | 0.827111 | 1.873903e-54 | -8.615850e-47 |
Msa0027320 | Msa0818630 | 0.800090 | 1.696832e-48 | -8.615850e-47 |
Msa0031820 | Msa0818630 | 0.810949 | 8.939402e-51 | -8.615850e-47 |
Msa0037160 | Msa0818630 | 0.807818 | 4.198344e-50 | -8.615850e-47 |
Msa0039250 | Msa0818630 | 0.833588 | 4.892528e-56 | -8.615850e-47 |
Msa0041690 | Msa0818630 | 0.823180 | 1.590961e-53 | -8.615850e-47 |
Msa0043500 | Msa0818630 | 0.812975 | 3.234264e-51 | -8.615850e-47 |
Msa0043650 | Msa0818630 | 0.806615 | 7.549865e-50 | -8.615850e-47 |
Msa0054820 | Msa0818630 | 0.818401 | 1.998218e-52 | -8.615850e-47 |
Msa0057710 | Msa0818630 | 0.852355 | 4.876145e-61 | -8.615850e-47 |
Msa0065550 | Msa0818630 | 0.803160 | 3.979568e-49 | -8.615850e-47 |
Msa0096580 | Msa0818630 | 0.800676 | 1.288957e-48 | -8.615850e-47 |
Msa0097950 | Msa0818630 | 0.833655 | 4.707156e-56 | -8.615850e-47 |
Msa0100160 | Msa0818630 | 0.801971 | 7.000668e-49 | -8.615850e-47 |
Msa0103180 | Msa0818630 | 0.808922 | 2.440763e-50 | -8.615850e-47 |
Msa0105520 | Msa0818630 | 0.807714 | 4.416663e-50 | -8.615850e-47 |
Msa0108390 | Msa0818630 | 0.805575 | 1.249557e-49 | -8.615850e-47 |
Msa0115090 | Msa0818630 | 0.813632 | 2.320411e-51 | -8.615850e-47 |
Msa0116790 | Msa0818630 | 0.807814 | 4.205343e-50 | -8.615850e-47 |
Msa0118000 | Msa0818630 | 0.827035 | 1.954136e-54 | -8.615850e-47 |
Msa0610500 | Msa0818630 | 0.806841 | 6.761605e-50 | -8.615850e-47 |
Msa0641140 | Msa0818630 | 0.804912 | 1.720464e-49 | -8.615850e-47 |
Msa0651150 | Msa0818630 | 0.817596 | 3.037599e-52 | -8.615850e-47 |
Msa0658480 | Msa0818630 | 0.804954 | 1.685491e-49 | -8.615850e-47 |
Msa0669180 | Msa0818630 | 0.809572 | 1.770441e-50 | -8.615850e-47 |
Msa0673270 | Msa0818630 | 0.804917 | 1.715551e-49 | -8.615850e-47 |
Msa0687230 | Msa0818630 | 0.812047 | 5.158769e-51 | -8.615850e-47 |
Msa0689760 | Msa0818630 | 0.827701 | 1.352947e-54 | -8.615850e-47 |
Msa0692880 | Msa0818630 | 0.800850 | 1.187507e-48 | -8.615850e-47 |
Msa0695130 | Msa0818630 | 0.800809 | 1.210939e-48 | -8.615850e-47 |
Msa0712560 | Msa0818630 | 0.807057 | 6.086432e-50 | -8.615850e-47 |
Msa0716410 | Msa0818630 | 0.802763 | 4.807987e-49 | -8.615850e-47 |
Msa0716860 | Msa0818630 | 0.828166 | 1.045836e-54 | -8.615850e-47 |
Msa0734960 | Msa0818630 | 0.826445 | 2.701931e-54 | -8.615850e-47 |
Msa0743680 | Msa0818630 | 0.800691 | 1.279989e-48 | -8.615850e-47 |
Msa0744090 | Msa0818630 | 0.800750 | 1.245102e-48 | -8.615850e-47 |
Msa0744100 | Msa0818630 | 0.830055 | 3.641544e-55 | -8.615850e-47 |
Msa0749300 | Msa0818630 | 0.800978 | 1.118205e-48 | -8.615850e-47 |
Msa0749400 | Msa0818630 | 0.808304 | 3.307944e-50 | -8.615850e-47 |
Msa0756110 | Msa0818630 | 0.803925 | 2.762481e-49 | -8.615850e-47 |
Msa0756930 | Msa0818630 | 0.820349 | 7.189239e-53 | -8.615850e-47 |
Msa0757800 | Msa0818630 | 0.814175 | 1.760822e-51 | -8.615850e-47 |
Msa0784060 | Msa0818630 | 0.837649 | 4.587756e-57 | -8.615850e-47 |
Msa0786270 | Msa0818630 | 0.800615 | 1.326469e-48 | -8.615850e-47 |
Msa0788120 | Msa0818630 | 0.829448 | 5.119544e-55 | -8.615850e-47 |
Msa0795660 | Msa0818630 | 0.824041 | 1.000774e-53 | -8.615850e-47 |
Msa0818630 | Msa0825270 | 0.828865 | 7.087556e-55 | -8.615850e-47 |
Msa0818630 | Msa0825280 | 0.805551 | 1.264087e-49 | -8.615850e-47 |
Msa0818630 | Msa0830390 | 0.818348 | 2.054129e-52 | -8.615850e-47 |
Msa0818630 | Msa0836500 | 0.808291 | 3.329016e-50 | -8.615850e-47 |
Msa0818630 | Msa0851470 | 0.804558 | 2.038893e-49 | -8.615850e-47 |
Msa0818630 | Msa0858820 | 0.825408 | 4.764765e-54 | -8.615850e-47 |
Msa0818630 | Msa0859180 | 0.801029 | 1.091880e-48 | -8.615850e-47 |
Msa0818630 | Msa0861600 | 0.800934 | 1.141641e-48 | -8.615850e-47 |
Msa0818630 | Msa0864420 | 0.822398 | 2.420565e-53 | -8.615850e-47 |
Msa0818630 | Msa0869010 | 0.800290 | 1.544793e-48 | -8.615850e-47 |
Msa0818630 | Msa0870650 | 0.802865 | 4.579773e-49 | -8.615850e-47 |
Msa0818630 | Msa0879850 | 0.817802 | 2.729461e-52 | -8.615850e-47 |
Msa0818630 | Msa0888940 | 0.840804 | 6.972333e-58 | -8.615850e-47 |
Msa0818630 | Msa0930780 | 0.801352 | 9.375667e-49 | -8.615850e-47 |
Msa0818630 | Msa0939000 | 0.804775 | 1.837294e-49 | -8.615850e-47 |
Msa0818630 | Msa0944660 | 0.845852 | 3.136309e-59 | -8.615850e-47 |
Msa0818630 | Msa0947530 | -0.825495 | 4.543092e-54 | -8.615850e-47 |
Msa0818630 | Msa0955190 | 0.815189 | 1.050216e-51 | -8.615850e-47 |
Msa0818630 | Msa0963020 | 0.808132 | 3.598132e-50 | -8.615850e-47 |
Msa0818630 | Msa0965020 | 0.806645 | 7.437425e-50 | -8.615850e-47 |
Msa0818630 | Msa0980940 | 0.826948 | 2.050132e-54 | -8.615850e-47 |
Msa0818630 | Msa0981430 | 0.834761 | 2.486088e-56 | -8.615850e-47 |
Msa0818630 | Msa0985550 | 0.816803 | 4.579704e-52 | -8.615850e-47 |
Msa0818630 | Msa0990590 | 0.824063 | 9.889164e-54 | -8.615850e-47 |
Msa0818630 | Msa0997430 | 0.803769 | 2.976751e-49 | -8.615850e-47 |
Msa0818630 | Msa1004420 | 0.822852 | 1.897325e-53 | -8.615850e-47 |
Msa0818630 | Msa1005820 | 0.806292 | 8.830193e-50 | -8.615850e-47 |
Msa0818630 | Msa1009750 | 0.803567 | 3.277043e-49 | -8.615850e-47 |
Msa0818630 | Msa1010070 | 0.835947 | 1.247369e-56 | -8.615850e-47 |
Msa0818630 | Msa1027250 | 0.810495 | 1.120389e-50 | -8.615850e-47 |
Msa0818630 | Msa1027360 | 0.814509 | 1.485757e-51 | -8.615850e-47 |
Msa0818630 | Msa1028350 | 0.816858 | 4.451883e-52 | -8.615850e-47 |
Msa0818630 | Msa1038080 | 0.820031 | 8.502285e-53 | -8.615850e-47 |
Msa0818630 | Msa1041210 | 0.813723 | 2.215905e-51 | -8.615850e-47 |
Msa0818630 | Msa1050910 | 0.814902 | 1.215923e-51 | -8.615850e-47 |
Msa0818630 | Msa1051330 | 0.811083 | 8.360201e-51 | -8.615850e-47 |
Msa0818630 | Msa1051600 | 0.810895 | 9.181186e-51 | -8.615850e-47 |
Msa0818630 | Msa1059960 | 0.809576 | 1.767685e-50 | -8.615850e-47 |
Msa0818630 | Msa1072600 | 0.800536 | 1.376404e-48 | -8.615850e-47 |
Msa0818630 | Msa1097820 | 0.812543 | 4.020366e-51 | -8.615850e-47 |
Msa0818630 | Msa1102770 | 0.808529 | 2.961205e-50 | -8.615850e-47 |
Msa0818630 | Msa1127540 | 0.815112 | 1.092492e-51 | -8.615850e-47 |
Msa0818630 | Msa1127590 | 0.801935 | 7.118461e-49 | -8.615850e-47 |
Msa0818630 | Msa1129690 | 0.841258 | 5.299571e-58 | -8.615850e-47 |
Msa0818630 | Msa1133400 | 0.802383 | 5.757997e-49 | -8.615850e-47 |
Msa0818630 | Msa1165740 | 0.810008 | 1.427216e-50 | -8.615850e-47 |
Msa0818630 | Msa1169720 | 0.805170 | 1.518753e-49 | -8.615850e-47 |
Msa0818630 | Msa1174100 | 0.812573 | 3.961381e-51 | -8.615850e-47 |
Msa0818630 | Msa1174850 | 0.802769 | 4.793616e-49 | -8.615850e-47 |
Msa0818630 | Msa1181170 | -0.818185 | 2.236392e-52 | -8.615850e-47 |
Msa0818630 | Msa1198880 | 0.802720 | 4.906259e-49 | -8.615850e-47 |
Msa0818630 | Msa1201810 | 0.806408 | 8.347942e-50 | -8.615850e-47 |
Msa0818630 | Msa1201830 | 0.815561 | 8.678418e-52 | -8.615850e-47 |
Msa0818630 | Msa1202150 | 0.800292 | 1.543075e-48 | -8.615850e-47 |
Msa0818630 | Msa1202580 | 0.800937 | 1.139926e-48 | -8.615850e-47 |
Msa0818630 | Msa1211340 | 0.806368 | 8.509042e-50 | -8.615850e-47 |
Msa0818630 | Msa1214320 | 0.805644 | 1.208421e-49 | -8.615850e-47 |
Msa0818630 | Msa1223330 | 0.821120 | 4.780857e-53 | -8.615850e-47 |
Msa0818630 | Msa1234550 | 0.804253 | 2.360733e-49 | -8.615850e-47 |
Msa0818630 | Msa1235250 | 0.816630 | 5.008059e-52 | -8.615850e-47 |
Msa0818630 | Msa1252190 | 0.805330 | 1.406344e-49 | -8.615850e-47 |
Msa0818630 | Msa1254710 | 0.805546 | 1.267082e-49 | -8.615850e-47 |
Msa0818630 | Msa1259640 | 0.805807 | 1.117114e-49 | -8.615850e-47 |
Msa0818630 | Msa1261070 | 0.804768 | 1.843425e-49 | -8.615850e-47 |
Msa0818630 | Msa1277080 | 0.819675 | 1.025354e-52 | -8.615850e-47 |
Msa0818630 | Msa1278740 | 0.826627 | 2.445297e-54 | -8.615850e-47 |
Msa0818630 | Msa1292830 | 0.802580 | 5.243749e-49 | -8.615850e-47 |
Msa0818630 | Msa1294960 | 0.812047 | 5.160554e-51 | -8.615850e-47 |
Msa0818630 | Msa1302060 | 0.804828 | 1.790854e-49 | -8.615850e-47 |
Msa0818630 | Msa1306390 | 0.805112 | 1.561802e-49 | -8.615850e-47 |
Msa0818630 | Msa1317950 | 0.812610 | 3.887801e-51 | -8.615850e-47 |
Msa0818630 | Msa1317960 | 0.822235 | 2.640213e-53 | -8.615850e-47 |
Msa0818630 | Msa1328640 | 0.805893 | 1.071109e-49 | -8.615850e-47 |
Msa0818630 | Msa1329790 | 0.816512 | 5.323446e-52 | -8.615850e-47 |
Msa0818630 | Msa1335160 | 0.824383 | 8.317445e-54 | -8.615850e-47 |
Msa0818630 | Msa1344310 | 0.805117 | 1.558442e-49 | -8.615850e-47 |
Msa0818630 | Msa1348650 | -0.815456 | 9.158019e-52 | -8.615850e-47 |
Msa0818630 | Msa1349520 | 0.800171 | 1.633497e-48 | -8.615850e-47 |
Msa0818630 | Msa1356610 | 0.817430 | 3.311247e-52 | -8.615850e-47 |
Msa0818630 | Msa1369150 | 0.803301 | 3.721916e-49 | -8.615850e-47 |
Msa0818630 | Msa1374060 | 0.815482 | 9.036469e-52 | -8.615850e-47 |
Msa0818630 | Msa1382560 | 0.800751 | 1.244144e-48 | -8.615850e-47 |
Msa0818630 | Msa1385810 | 0.812553 | 4.002064e-51 | -8.615850e-47 |
Msa0818630 | Msa1409260 | 0.816790 | 4.612597e-52 | -8.615850e-47 |
Msa0818630 | Msa1409950 | 0.801008 | 1.102775e-48 | -8.615850e-47 |
Msa0818630 | Msa1410420 | 0.800793 | 1.219781e-48 | -8.615850e-47 |
Msa0818630 | Msa1411950 | 0.803385 | 3.575095e-49 | -8.615850e-47 |
Msa0818630 | Msa1420250 | 0.828478 | 8.792728e-55 | -8.615850e-47 |
Msa0818630 | Msa1438450 | 0.802542 | 5.341087e-49 | -8.615850e-47 |
Msa0818630 | Msa1439610 | 0.806221 | 9.138537e-50 | -8.615850e-47 |
Msa0818630 | Msa1443930 | 0.812245 | 4.672543e-51 | -8.615850e-47 |
Msa0818630 | Msa1446780 | 0.828979 | 6.651144e-55 | -8.615850e-47 |
Msa0818630 | Msa1450720 | 0.815890 | 7.332754e-52 | -8.615850e-47 |
Msa0126770 | Msa0818630 | 0.802131 | 6.488183e-49 | -8.615850e-47 |
Msa0127040 | Msa0818630 | 0.808829 | 2.554756e-50 | -8.615850e-47 |
Msa0127850 | Msa0818630 | 0.800995 | 1.109297e-48 | -8.615850e-47 |
Msa0130240 | Msa0818630 | 0.819078 | 1.402620e-52 | -8.615850e-47 |
Msa0133720 | Msa0818630 | 0.834373 | 3.112498e-56 | -8.615850e-47 |
Msa0133820 | Msa0818630 | 0.825744 | 3.966370e-54 | -8.615850e-47 |
Msa0137610 | Msa0818630 | -0.804650 | 1.950792e-49 | -8.615850e-47 |
Msa0138750 | Msa0818630 | 0.806356 | 8.561217e-50 | -8.615850e-47 |
Msa0140300 | Msa0818630 | 0.802209 | 6.254415e-49 | -8.615850e-47 |
Msa0144360 | Msa0818630 | 0.830153 | 3.447209e-55 | -8.615850e-47 |
Msa0146280 | Msa0818630 | 0.821070 | 4.908998e-53 | -8.615850e-47 |
Msa0156230 | Msa0818630 | 0.805618 | 1.223595e-49 | -8.615850e-47 |
Msa0160670 | Msa0818630 | 0.807498 | 4.907949e-50 | -8.615850e-47 |
Msa0165440 | Msa0818630 | 0.806007 | 1.013596e-49 | -8.615850e-47 |
Msa0171850 | Msa0818630 | 0.823016 | 1.737815e-53 | -8.615850e-47 |
Msa0174000 | Msa0818630 | 0.803498 | 3.386843e-49 | -8.615850e-47 |
Msa0177210 | Msa0818630 | 0.820195 | 7.796524e-53 | -8.615850e-47 |
Msa0181230 | Msa0818630 | 0.817541 | 3.126292e-52 | -8.615850e-47 |
Msa0197780 | Msa0818630 | 0.812552 | 4.003048e-51 | -8.615850e-47 |
Msa0198520 | Msa0818630 | 0.810661 | 1.031803e-50 | -8.615850e-47 |
Msa0198530 | Msa0818630 | 0.806384 | 8.443280e-50 | -8.615850e-47 |
Msa0215360 | Msa0818630 | 0.804524 | 2.073091e-49 | -8.615850e-47 |
Msa0218350 | Msa0818630 | 0.809915 | 1.494239e-50 | -8.615850e-47 |
Msa0225640 | Msa0818630 | 0.811238 | 7.738226e-51 | -8.615850e-47 |
Msa0227400 | Msa0818630 | 0.801113 | 1.049209e-48 | -8.615850e-47 |
Msa0232320 | Msa0818630 | 0.801596 | 8.358169e-49 | -8.615850e-47 |
Msa0381000 | Msa0818630 | 0.807725 | 4.392107e-50 | -8.615850e-47 |
Msa0381080 | Msa0818630 | 0.807533 | 4.826077e-50 | -8.615850e-47 |
Msa0384670 | Msa0818630 | 0.800034 | 1.741936e-48 | -8.615850e-47 |
Msa0388990 | Msa0818630 | 0.821008 | 5.072177e-53 | -8.615850e-47 |
Msa0392200 | Msa0818630 | 0.807157 | 5.796484e-50 | -8.615850e-47 |
Msa0403660 | Msa0818630 | 0.806203 | 9.218148e-50 | -8.615850e-47 |
Msa0411410 | Msa0818630 | 0.808407 | 3.144889e-50 | -8.615850e-47 |
Msa0413450 | Msa0818630 | 0.804165 | 2.462450e-49 | -8.615850e-47 |
Msa0430870 | Msa0818630 | 0.815043 | 1.131383e-51 | -8.615850e-47 |
Msa0431770 | Msa0818630 | 0.816750 | 4.706874e-52 | -8.615850e-47 |
Msa0432070 | Msa0818630 | 0.815949 | 7.113086e-52 | -8.615850e-47 |
Msa0434570 | Msa0818630 | 0.807912 | 4.007845e-50 | -8.615850e-47 |
Msa0434770 | Msa0818630 | 0.810360 | 1.198394e-50 | -8.615850e-47 |
Msa0436200 | Msa0818630 | 0.824774 | 6.728205e-54 | -8.615850e-47 |
Msa0474700 | Msa0818630 | 0.832143 | 1.118285e-55 | -8.615850e-47 |
Msa0478580 | Msa0818630 | 0.815531 | 8.814662e-52 | -8.615850e-47 |
Msa0479200 | Msa0818630 | 0.805434 | 1.337649e-49 | -8.615850e-47 |
Msa0239450 | Msa0818630 | 0.802259 | 6.107778e-49 | -8.615850e-47 |
Msa0241830 | Msa0818630 | 0.810862 | 9.335205e-51 | -8.615850e-47 |
Msa0247060 | Msa0818630 | 0.816035 | 6.804528e-52 | -8.615850e-47 |
Msa0278790 | Msa0818630 | 0.807694 | 4.461104e-50 | -8.615850e-47 |
Msa0295590 | Msa0818630 | 0.802253 | 6.124267e-49 | -8.615850e-47 |
Msa0300350 | Msa0818630 | 0.801146 | 1.033112e-48 | -8.615850e-47 |
Msa0307850 | Msa0818630 | 0.807189 | 5.706405e-50 | -8.615850e-47 |
Msa0318720 | Msa0818630 | 0.825886 | 3.670867e-54 | -8.615850e-47 |
Msa0322900 | Msa0818630 | 0.818300 | 2.106718e-52 | -8.615850e-47 |
Msa0324240 | Msa0818630 | 0.810062 | 1.388957e-50 | -8.615850e-47 |
Msa0343190 | Msa0818630 | 0.821478 | 3.953633e-53 | -8.615850e-47 |
Msa0346990 | Msa0818630 | 0.809784 | 1.594466e-50 | -8.615850e-47 |
Msa0363810 | Msa0818630 | 0.803643 | 3.160490e-49 | -8.615850e-47 |
Msa0506940 | Msa0818630 | 0.801943 | 7.091625e-49 | -8.615850e-47 |
Msa0510290 | Msa0818630 | 0.809091 | 2.246029e-50 | -8.615850e-47 |
Msa0518030 | Msa0818630 | 0.835839 | 1.328617e-56 | -8.615850e-47 |
Msa0518960 | Msa0818630 | 0.802219 | 6.223210e-49 | -8.615850e-47 |
Msa0524590 | Msa0818630 | 0.820289 | 7.422381e-53 | -8.615850e-47 |
Msa0550570 | Msa0818630 | 0.806865 | 6.684525e-50 | -8.615850e-47 |
Msa0556010 | Msa0818630 | 0.815528 | 8.830063e-52 | -8.615850e-47 |
Msa0557070 | Msa0818630 | 0.818691 | 1.717726e-52 | -8.615850e-47 |
Msa0561430 | Msa0818630 | 0.814629 | 1.397550e-51 | -8.615850e-47 |
Msa0578090 | Msa0818630 | 0.803251 | 3.810368e-49 | -8.615850e-47 |
Msa0581690 | Msa0818630 | 0.816553 | 5.210551e-52 | -8.615850e-47 |
Msa0583500 | Msa0818630 | 0.807904 | 4.023947e-50 | -8.615850e-47 |
Msa0597770 | Msa0818630 | 0.809859 | 1.536630e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0818630 | MtrunA17_Chr5g0437431 | 95.585 | 521 | 14 | 3 | 1 | 513 | 1 | 520 | 0.0 | 1017 |
Msa0818630 | MtrunA17_Chr3g0113911 | 74.636 | 481 | 111 | 2 | 41 | 510 | 35 | 515 | 0.0 | 751 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0818630 | AT5G05520.1 | 54.023 | 522 | 225 | 4 | 1 | 508 | 1 | 521 | 0.0 | 595 |
Msa0818630 | AT3G11070.1 | 56.904 | 478 | 195 | 2 | 38 | 509 | 46 | 518 | 0.0 | 594 |
Find 128 sgRNAs with CRISPR-Local
Find 693 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGGAGGACCAAGAACTTTA+TGG | 0.213542 | 5_3:+54604689 | Msa0818630:CDS |
TGATCTATGGGATGCTTCTT+TGG | 0.223236 | 5_3:+54600023 | Msa0818630:CDS |
TGGGATGCTTCTTTGGCTTA+TGG | 0.239702 | 5_3:+54600030 | Msa0818630:CDS |
CCACCCAAATAAAACCTTTC+GGG | 0.259264 | 5_3:-54604643 | None:intergenic |
TTCCATGGGGCCAAGGGTTT+AGG | 0.262516 | 5_3:+54604602 | Msa0818630:CDS |
CATGCTTTCTCAAGATTTGC+AGG | 0.270296 | 5_3:+54600137 | Msa0818630:CDS |
TTGAATCCCCATAAAGTTCT+TGG | 0.295180 | 5_3:-54604697 | None:intergenic |
GTTCGCTTTGGTGTCCCTTT+TGG | 0.298621 | 5_3:+54604532 | Msa0818630:CDS |
TTGTTCTCTCAACCACCTAA+TGG | 0.305653 | 5_3:-54604845 | None:intergenic |
GATTATCCAATCTTTGGTTT+TGG | 0.310170 | 5_3:-54598745 | None:intergenic |
TTCAGCTTCTCAGCTCCTTT+TGG | 0.318841 | 5_3:+54605662 | Msa0818630:CDS |
GCAGTATTCGGCAACTCTTC+CGG | 0.328083 | 5_3:-54598897 | None:intergenic |
CAAGCGACAGAGGCGAGCTT+TGG | 0.328741 | 5_3:+54600060 | Msa0818630:CDS |
AGCTTCGATTATCCAATCTT+TGG | 0.330408 | 5_3:-54598751 | None:intergenic |
AACACGTCGTGGACTCGAAT+TGG | 0.331263 | 5_3:-54598708 | None:intergenic |
ATAGGAGAGATTCACGTATT+AGG | 0.353642 | 5_3:+54600346 | Msa0818630:CDS |
AGTAAGCTTACTGGTGGATT+TGG | 0.356992 | 5_3:+54598951 | Msa0818630:CDS |
AAGCGACAGAGGCGAGCTTT+GGG | 0.362430 | 5_3:+54600061 | Msa0818630:CDS |
CTTTATGGGGATTCAAAACT+AGG | 0.366748 | 5_3:+54604704 | Msa0818630:CDS |
AGGAAGGATGAGCATGATAG+TGG | 0.369315 | 5_3:+54605623 | Msa0818630:CDS |
TTCATCGTCGATGTTGTTGT+TGG | 0.370292 | 5_3:-54598538 | None:intergenic |
AAATGGCATCAAGGTCTATA+AGG | 0.370900 | 5_3:+54600271 | Msa0818630:CDS |
TTCTCTCCAGTTTGCACCCT+AGG | 0.376195 | 5_3:+54604670 | Msa0818630:CDS |
ATGTTGTTGTTGGGTTTAGA+TGG | 0.384943 | 5_3:-54598528 | None:intergenic |
TTTAAGAGCGCTACAAAATC+AGG | 0.386866 | 5_3:-54605713 | None:intergenic |
GATGACACCCTTGACTTCAT+TGG | 0.390243 | 5_3:+54604775 | Msa0818630:CDS |
ATAGATCACCATAACCAAAA+AGG | 0.391033 | 5_3:-54600008 | None:intergenic |
ACCACCCAAATAAAACCTTT+CGG | 0.391878 | 5_3:-54604644 | None:intergenic |
GAAACGTTGATTGCGTAGTT+TGG | 0.393084 | 5_3:-54598643 | None:intergenic |
ACAACAACATTCGCAGTATT+CGG | 0.399290 | 5_3:-54598909 | None:intergenic |
AGGAGGACCAAGAACTTTAT+GGG | 0.408479 | 5_3:+54604690 | Msa0818630:CDS |
GAGCTTGCGGTTTCTGCGCC+AGG | 0.409872 | 5_3:+54600431 | Msa0818630:CDS |
AATATACATTTAAATATGAT+AGG | 0.413099 | 5_3:+54600328 | Msa0818630:CDS |
CTGAACCTTGGCATATCTGC+TGG | 0.413852 | 5_3:+54604571 | Msa0818630:CDS |
GGTCTATAAGGAGGCAGCTT+GGG | 0.425603 | 5_3:+54600283 | Msa0818630:CDS |
GTCCACGACGTGTTCATTAC+CGG | 0.431072 | 5_3:+54598717 | Msa0818630:CDS |
AACCGCAAGCTCTGGTGATT+CGG | 0.433084 | 5_3:-54600420 | None:intergenic |
GGCGCAGAAACCGCAAGCTC+TGG | 0.435555 | 5_3:-54600428 | None:intergenic |
ATAATCGAAGCTGAACTTGA+TGG | 0.436592 | 5_3:+54598762 | Msa0818630:CDS |
AACCTTTCGGGGAGGGGAGA+TGG | 0.437309 | 5_3:-54604631 | None:intergenic |
TCTTACAAAGAGCAACTGTT+AGG | 0.438869 | 5_3:+54600168 | Msa0818630:CDS |
GTTTCCACAACTCACTTTGG+TGG | 0.439915 | 5_3:+54600390 | Msa0818630:CDS |
TCATCGTCGATGTTGTTGTT+GGG | 0.440858 | 5_3:-54598537 | None:intergenic |
CAGGACTTGGTGTACACTCT+TGG | 0.442382 | 5_3:+54600222 | Msa0818630:CDS |
TGTTCTCTCAACCACCTAAT+GGG | 0.444160 | 5_3:-54604844 | None:intergenic |
GACTCGAATTGGAACTTGTT+CGG | 0.446082 | 5_3:-54598697 | None:intergenic |
TTTCGGTTGTCTGCTGGATG+TGG | 0.451957 | 5_3:+54604964 | Msa0818630:CDS |
CAGGAGTTTGATGTTCGCTT+TGG | 0.452666 | 5_3:+54604520 | Msa0818630:intron |
GAGACGGAGAGTAAGCTTAC+TGG | 0.453210 | 5_3:+54598942 | Msa0818630:CDS |
ATAAAGTTCTTGGTCCTCCT+AGG | 0.454183 | 5_3:-54604687 | None:intergenic |
GCTGTATTATAAAATCCAAA+AGG | 0.455241 | 5_3:-54604547 | None:intergenic |
TTTGTTTCCACAACTCACTT+TGG | 0.464490 | 5_3:+54600387 | Msa0818630:CDS |
TGAACCTTGGCATATCTGCT+GGG | 0.468095 | 5_3:+54604572 | Msa0818630:CDS |
GAAACACCAAAACCAAAGAT+TGG | 0.468959 | 5_3:+54598739 | Msa0818630:CDS |
GAGCATGATAGTGGGAAGAC+TGG | 0.480419 | 5_3:+54605632 | Msa0818630:CDS |
AAATAAAACCTTTCGGGGAG+GGG | 0.482085 | 5_3:-54604637 | None:intergenic |
CATTTGTGATGGATCTGTTA+AGG | 0.486537 | 5_3:-54600253 | None:intergenic |
CTTAACAGATCCATCACAAA+TGG | 0.487392 | 5_3:+54600254 | Msa0818630:CDS |
ATCGTCAAAGCACCAGGACT+TGG | 0.488454 | 5_3:+54600209 | Msa0818630:CDS |
TGTAGGGTTAAGCTTGAAGC+TGG | 0.488985 | 5_3:+54598873 | Msa0818630:CDS |
TAATGGGAAGATCAAAAGAT+AGG | 0.489720 | 5_3:-54604828 | None:intergenic |
GTCCTAAACCCTTGGCCCCA+TGG | 0.495790 | 5_3:-54604604 | None:intergenic |
ATAAGGAGGCAGCTTGGGCA+TGG | 0.498800 | 5_3:+54600288 | Msa0818630:CDS |
AAAGAGTCTAGGAACTTTCG+AGG | 0.503011 | 5_3:-54604943 | None:intergenic |
GGTCCTCCTAGGGTGCAAAC+TGG | 0.508678 | 5_3:-54604676 | None:intergenic |
TGCGAGGCTTCAACGGCTTG+AGG | 0.510882 | 5_3:+54598839 | Msa0818630:CDS |
ATGAGAACTCAGCTGCCAAA+AGG | 0.512958 | 5_3:-54605677 | None:intergenic |
CACCGAATCACCAGAGCTTG+CGG | 0.516887 | 5_3:+54600418 | Msa0818630:CDS |
TAAAGTTCTTGGTCCTCCTA+GGG | 0.520203 | 5_3:-54604686 | None:intergenic |
TCTAGGCGGAAGAGTCTAGT+AGG | 0.522923 | 5_3:-54604997 | None:intergenic |
CAAATAAAACCTTTCGGGGA+GGG | 0.524452 | 5_3:-54604638 | None:intergenic |
GACCTTGATGCCATTTGTGA+TGG | 0.532843 | 5_3:-54600264 | None:intergenic |
TTTATGGGGATTCAAAACTA+GGG | 0.535376 | 5_3:+54604705 | Msa0818630:CDS |
AGGTCTATAAGGAGGCAGCT+TGG | 0.535390 | 5_3:+54600282 | Msa0818630:CDS |
GGTTAAGCTTGAAGCTGGAC+CGG | 0.539261 | 5_3:+54598878 | Msa0818630:CDS |
ATCGAGATTAAAATAAAGTA+CGG | 0.540171 | 5_3:-54605770 | None:intergenic |
TGTTAACTCCACTTGTGGCA+CGG | 0.541802 | 5_3:+54600109 | Msa0818630:CDS |
ATCCATCACAAATGGCATCA+AGG | 0.543631 | 5_3:+54600262 | Msa0818630:CDS |
TTGCTGCTGCGAGGCTTCAA+CGG | 0.545021 | 5_3:+54598832 | Msa0818630:CDS |
TCACGTATTAGGCCTACAAA+AGG | 0.545769 | 5_3:+54600357 | Msa0818630:CDS |
CATGAGTTCCTGCATTGTAG+TGG | 0.549340 | 5_3:-54598796 | None:intergenic |
CTGTATTATAAAATCCAAAA+GGG | 0.550990 | 5_3:-54604546 | None:intergenic |
TATAATACAGCACTGAACCT+TGG | 0.551314 | 5_3:+54604559 | Msa0818630:CDS |
GGATTCAAAACTAGGGGAGT+AGG | 0.552285 | 5_3:+54604712 | Msa0818630:CDS |
ATGGCTTAGTCCTAAACCCT+TGG | 0.553158 | 5_3:-54604612 | None:intergenic |
CAATATTAAGAGAGATGTGT+GGG | 0.553932 | 5_3:+54605809 | Msa0818630:three_prime_UTR |
TTGTTCGGAGGCTAATCGAC+GGG | 0.555091 | 5_3:-54598682 | None:intergenic |
CTTGATATCGTCAAAGCACC+AGG | 0.558447 | 5_3:+54600203 | Msa0818630:CDS |
GTATATGCTCCTCGTCTGAA+AGG | 0.558993 | 5_3:+54600084 | Msa0818630:CDS |
CTCACAAATGGAAACTGCAC+AGG | 0.564413 | 5_3:+54598500 | None:intergenic |
TGGCGGCAAGCAAGCGACAG+AGG | 0.567213 | 5_3:+54600050 | Msa0818630:CDS |
CAAGAGTGTACACCAAGTCC+TGG | 0.569597 | 5_3:-54600221 | None:intergenic |
ACTTGGTGTACACTCTTGGA+TGG | 0.574272 | 5_3:+54600226 | Msa0818630:CDS |
CGAGAAAGCCACTACAATGC+AGG | 0.579571 | 5_3:+54598788 | Msa0818630:CDS |
GATCACCTCCAATGAAGTCA+AGG | 0.579571 | 5_3:-54604783 | None:intergenic |
TCTCCAGTTTGCACCCTAGG+AGG | 0.582476 | 5_3:+54604673 | Msa0818630:CDS |
TTGAGAGAACAAGGAATACA+TGG | 0.582554 | 5_3:+54604856 | Msa0818630:CDS |
AGCCATCTCCCCTCCCCGAA+AGG | 0.584565 | 5_3:+54604629 | Msa0818630:CDS |
ATGAACAACCGTGCCACAAG+TGG | 0.585342 | 5_3:-54600117 | None:intergenic |
TAAGGAGGCAGCTTGGGCAT+GGG | 0.585441 | 5_3:+54600289 | Msa0818630:CDS |
ATTAGGTGGTTGAGAGAACA+AGG | 0.591529 | 5_3:+54604847 | Msa0818630:CDS |
GACACCCTTGACTTCATTGG+AGG | 0.594643 | 5_3:+54604778 | Msa0818630:CDS |
CAGACAACCGAAAAGAGTCT+AGG | 0.595816 | 5_3:-54604954 | None:intergenic |
TACTAGACTCTTCCGCCTAG+AGG | 0.598676 | 5_3:+54604999 | Msa0818630:CDS |
TGTTGTTGATGTTGTTGAGA+CGG | 0.602109 | 5_3:+54598926 | Msa0818630:CDS |
GGAAGGATGAGCATGATAGT+GGG | 0.604644 | 5_3:+54605624 | Msa0818630:CDS |
GTTAAGGCATGGACTACAGA+AGG | 0.605360 | 5_3:+54599967 | Msa0818630:CDS |
AGGATTGTTAACTCCACTTG+TGG | 0.606581 | 5_3:+54600104 | Msa0818630:CDS |
CTTCTCAGATTGCTGCTGCG+AGG | 0.615777 | 5_3:+54598823 | Msa0818630:CDS |
GAACCTTGGCATATCTGCTG+GGG | 0.619177 | 5_3:+54604573 | Msa0818630:CDS |
TTATGGGGATTCAAAACTAG+GGG | 0.620512 | 5_3:+54604706 | Msa0818630:CDS |
CCAAATAAAACCTTTCGGGG+AGG | 0.620795 | 5_3:-54604639 | None:intergenic |
CAGCCCCAGCAGATATGCCA+AGG | 0.628189 | 5_3:-54604576 | None:intergenic |
GGAGGACCAAGAACTTTATG+GGG | 0.629896 | 5_3:+54604691 | Msa0818630:CDS |
ACGGAGAGTAAGCTTACTGG+TGG | 0.633045 | 5_3:+54598945 | Msa0818630:CDS |
CACCCAAATAAAACCTTTCG+GGG | 0.635268 | 5_3:-54604642 | None:intergenic |
ATCACCTCCAATGAAGTCAA+GGG | 0.636895 | 5_3:-54604782 | None:intergenic |
ACAATATTAAGAGAGATGTG+TGG | 0.643815 | 5_3:+54605808 | Msa0818630:three_prime_UTR |
GATGCTTCTTTGGCTTATGG+CGG | 0.646782 | 5_3:+54600033 | Msa0818630:CDS |
TTCCGGTAATGAACACGTCG+TGG | 0.651832 | 5_3:-54598719 | None:intergenic |
TAGGTCCTACTGAACCGCGA+AGG | 0.662127 | 5_3:+54604731 | Msa0818630:CDS |
AAGACCACCAAAGTGAGTTG+TGG | 0.662641 | 5_3:-54600394 | None:intergenic |
CTTGTTCGGAGGCTAATCGA+CGG | 0.665781 | 5_3:-54598683 | None:intergenic |
TGGCATCAAGGTCTATAAGG+AGG | 0.668182 | 5_3:+54600274 | Msa0818630:CDS |
GTTAACAATCCTTTCAGACG+AGG | 0.669845 | 5_3:-54600093 | None:intergenic |
TCGAATTGGAACTTGTTCGG+AGG | 0.677063 | 5_3:-54598694 | None:intergenic |
AACTGAAGCTAACCTCTAGG+CGG | 0.686654 | 5_3:-54605011 | None:intergenic |
AGCGACAGAGGCGAGCTTTG+GGG | 0.692051 | 5_3:+54600062 | Msa0818630:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTGTG+TGG | + | chr5_3:54599921-54599940 | Msa0818630:intron | 10.0% |
!! | AATATACATTTAAATATGAT+AGG | + | chr5_3:54600328-54600347 | Msa0818630:CDS | 10.0% |
!! | TTTATAGTTTAAAAAATTGT+CGG | - | chr5_3:54600644-54600663 | None:intergenic | 10.0% |
!!! | TTTTAAACTATAAATTTTTG+GGG | + | chr5_3:54600650-54600669 | Msa0818630:intron | 10.0% |
!! | ACAAACAAAAATATAATTTA+AGG | - | chr5_3:54600779-54600798 | None:intergenic | 10.0% |
!!! | AATTATATTTTTGTTTGTTA+TGG | + | chr5_3:54600781-54600800 | Msa0818630:intron | 10.0% |
!! | ACAACAAAAATTAAAAAAAA+AGG | + | chr5_3:54601934-54601953 | Msa0818630:intron | 10.0% |
!!! | ATAATTTTCTCAATAATTAC+TGG | - | chr5_3:54599093-54599112 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAACATGCATT+AGG | - | chr5_3:54599897-54599916 | None:intergenic | 15.0% |
!!! | CAATATTTTTTCAATAAGTT+TGG | - | chr5_3:54600555-54600574 | None:intergenic | 15.0% |
!! | CAAACTTATTGAAAAAATAT+TGG | + | chr5_3:54600553-54600572 | Msa0818630:intron | 15.0% |
!! | TGTAGAATATATATTTCAAA+TGG | + | chr5_3:54601333-54601352 | Msa0818630:intron | 15.0% |
!!! | ATATAAAACAATCATTTTTG+GGG | - | chr5_3:54601971-54601990 | None:intergenic | 15.0% |
!!! | GATATAAAACAATCATTTTT+GGG | - | chr5_3:54601972-54601991 | None:intergenic | 15.0% |
!!! | TGATATAAAACAATCATTTT+TGG | - | chr5_3:54601973-54601992 | None:intergenic | 15.0% |
!! | CTAAAAAGAAATATAAAACA+CGG | - | chr5_3:54602027-54602046 | None:intergenic | 15.0% |
!!! | TTGTTGATTTTAAAACTTAT+AGG | - | chr5_3:54602100-54602119 | None:intergenic | 15.0% |
!!! | AAGTTTTAAAATCAACAATT+TGG | + | chr5_3:54602102-54602121 | Msa0818630:intron | 15.0% |
!!! | TTTTAGAAGACAAAAAAATT+TGG | + | chr5_3:54602134-54602153 | Msa0818630:intron | 15.0% |
!! | AAAATTGAAAGTTAAAACAA+TGG | + | chr5_3:54602217-54602236 | Msa0818630:intron | 15.0% |
!! | AAATTGAAAGTTAAAACAAT+GGG | + | chr5_3:54602218-54602237 | Msa0818630:intron | 15.0% |
!!! | AAGATACTAGATTTAAAATT+TGG | + | chr5_3:54602308-54602327 | Msa0818630:intron | 15.0% |
!!! | TATTTTGAAAATGAGAAAAA+TGG | + | chr5_3:54602743-54602762 | Msa0818630:intron | 15.0% |
!! | TCAAAAAACATATAAAAAGA+AGG | - | chr5_3:54602925-54602944 | None:intergenic | 15.0% |
!!! | ATTTTTTTATATTTGGACAT+TGG | + | chr5_3:54605165-54605184 | Msa0818630:intron | 15.0% |
!! | ATTATGATTACTATATTATC+AGG | - | chr5_3:54605359-54605378 | None:intergenic | 15.0% |
!! | TTCAATATTTGAATATTGAG+CGG | + | chr5_3:54599309-54599328 | Msa0818630:intron | 20.0% |
!!! | TCGTTTTCTCATATTATTAT+TGG | - | chr5_3:54599481-54599500 | None:intergenic | 20.0% |
!!! | TTCATTTTTTCTATTAGCTA+TGG | + | chr5_3:54599845-54599864 | Msa0818630:intron | 20.0% |
!!! | TCATTTTTTCTATTAGCTAT+GGG | + | chr5_3:54599846-54599865 | Msa0818630:intron | 20.0% |
!!! | AATTATATGTTGCTTTTTGT+AGG | + | chr5_3:54599945-54599964 | Msa0818630:intron | 20.0% |
!! | TCCTAAATTACACATTAAAT+GGG | - | chr5_3:54601251-54601270 | None:intergenic | 20.0% |
!!! | TATATTTCAAATGGATTGTT+TGG | + | chr5_3:54601342-54601361 | Msa0818630:intron | 20.0% |
!! | CAAAACTATACTTAAAAATC+TGG | - | chr5_3:54601719-54601738 | None:intergenic | 20.0% |
!!! | CAGATTTTTAAGTATAGTTT+TGG | + | chr5_3:54601717-54601736 | Msa0818630:intron | 20.0% |
!!! | TTTAAGTATAGTTTTGGATA+TGG | + | chr5_3:54601723-54601742 | Msa0818630:intron | 20.0% |
!! | TACATCATATGAAAGTTATT+GGG | - | chr5_3:54601828-54601847 | None:intergenic | 20.0% |
!! | ATACATCATATGAAAGTTAT+TGG | - | chr5_3:54601829-54601848 | None:intergenic | 20.0% |
!!! | ATTATATCGACTTTAATCAA+AGG | - | chr5_3:54601908-54601927 | None:intergenic | 20.0% |
!!! | TATAAAACAATCATTTTTGG+GGG | - | chr5_3:54601970-54601989 | None:intergenic | 20.0% |
!!! | CGTGTTTTATATTTCTTTTT+AGG | + | chr5_3:54602025-54602044 | Msa0818630:intron | 20.0% |
!! | TGAAAACAACAAATTAGTTA+GGG | - | chr5_3:54602880-54602899 | None:intergenic | 20.0% |
!! | ATGAAAACAACAAATTAGTT+AGG | - | chr5_3:54602879-54602898 | None:intergenic | 20.0% |
!!! | TTTTGTCTTCTAAAAATTGA+GGG | - | chr5_3:54602129-54602148 | None:intergenic | 20.0% |
!!! | TTTTTGTCTTCTAAAAATTG+AGG | - | chr5_3:54602130-54602149 | None:intergenic | 20.0% |
!!! | GCTTATCTTCTAAAAAAAAA+TGG | - | chr5_3:54602274-54602293 | None:intergenic | 20.0% |
!! | AATTTGATTGATATGAATGA+AGG | + | chr5_3:54602356-54602375 | Msa0818630:intron | 20.0% |
!! | ATTTGATTGATATGAATGAA+GGG | + | chr5_3:54602357-54602376 | Msa0818630:intron | 20.0% |
!!! | GAATTTTGTATGAAGAAATT+AGG | + | chr5_3:54602379-54602398 | Msa0818630:intron | 20.0% |
!!! | AAGTTTTAAAATCAACGATT+TGG | - | chr5_3:54602848-54602867 | None:intergenic | 20.0% |
!!! | ATCGTTGATTTTAAAACTTA+TGG | + | chr5_3:54602849-54602868 | Msa0818630:intron | 20.0% |
!!! | TCGTTGATTTTAAAACTTAT+GGG | + | chr5_3:54602850-54602869 | Msa0818630:intron | 20.0% |
!!! | CTAATTTGTTGTTTTCATTT+TGG | - | chr5_3:54602073-54602092 | None:intergenic | 20.0% |
!! | ATGAAAACAACAAATTAGTT+AGG | + | chr5_3:54602879-54602898 | Msa0818630:intron | 20.0% |
!! | TGAAAACAACAAATTAGTTA+GGG | + | chr5_3:54602880-54602899 | Msa0818630:intron | 20.0% |
!! | AGAACAAAATCTTTAATACT+GGG | - | chr5_3:54602992-54603011 | None:intergenic | 20.0% |
!! | AAGAACAAAATCTTTAATAC+TGG | - | chr5_3:54602993-54603012 | None:intergenic | 20.0% |
!! | TAAGAACAAAATCTTTAACA+CGG | - | chr5_3:54603067-54603086 | None:intergenic | 20.0% |
!!! | AAAAAAATATCAAGTTGTGT+TGG | - | chr5_3:54604440-54604459 | None:intergenic | 20.0% |
!! | CTGTATTATAAAATCCAAAA+GGG | - | chr5_3:54604549-54604568 | None:intergenic | 20.0% |
!! | TTATCTTTCATTTAAGAAGT+AGG | + | chr5_3:54605043-54605062 | Msa0818630:intron | 20.0% |
!! | ATTTATACAAAATGTAGCTT+TGG | - | chr5_3:54605408-54605427 | None:intergenic | 20.0% |
!!! | AATTGATATTTTGAGTATGT+CGG | + | chr5_3:54605472-54605491 | Msa0818630:intron | 20.0% |
!! | ATCGAGATTAAAATAAAGTA+CGG | - | chr5_3:54605773-54605792 | None:intergenic | 20.0% |
!! | ATAAGAGAAAAAAAGTAGAA+AGG | + | chr5_3:54605861-54605880 | Msa0818630:three_prime_UTR | 20.0% |
! | TTTAATACGATAAATGCTAC+CGG | + | chr5_3:54599032-54599051 | Msa0818630:intron | 25.0% |
!!! | ATGCCTTTTATAAGAAGTAT+CGG | + | chr5_3:54599180-54599199 | Msa0818630:intron | 25.0% |
! | TCTACTTTGCATGATTTAAT+TGG | - | chr5_3:54599626-54599645 | None:intergenic | 25.0% |
!! | TCATGCAAAGTAGATATTTT+AGG | + | chr5_3:54599632-54599651 | Msa0818630:intron | 25.0% |
! | TATATACACAAGGAGTTAAT+TGG | - | chr5_3:54599735-54599754 | None:intergenic | 25.0% |
! | TTAACTCCTTGTGTATATAT+AGG | + | chr5_3:54599736-54599755 | Msa0818630:intron | 25.0% |
!!! | CATTTTTTCTATTAGCTATG+GGG | + | chr5_3:54599847-54599866 | Msa0818630:intron | 25.0% |
!!! | AAATTTAGAAGTTCTAGCTT+TGG | - | chr5_3:54600579-54600598 | None:intergenic | 25.0% |
!!! | AACTATAAATTTTTGGGGTA+TGG | + | chr5_3:54600655-54600674 | Msa0818630:intron | 25.0% |
!!! | TTTTGTTTGTTATGGTCTTA+TGG | + | chr5_3:54600789-54600808 | Msa0818630:intron | 25.0% |
!! | GGGAATAATCATAAAAGTAT+TGG | + | chr5_3:54600842-54600861 | Msa0818630:intron | 25.0% |
!! | TTTTCCAAACATTCATTCAT+TGG | - | chr5_3:54601053-54601072 | None:intergenic | 25.0% |
! | ATGTTTGGAAAATAAGTTCT+TGG | + | chr5_3:54601061-54601080 | Msa0818630:intron | 25.0% |
! | TAACTTAAAAAATTCCACCA+AGG | + | chr5_3:54601156-54601175 | Msa0818630:intron | 25.0% |
! | AATGGAAATCAAGATTTACA+TGG | + | chr5_3:54601185-54601204 | Msa0818630:intron | 25.0% |
! | TAAATTACACATTAAATGGG+TGG | - | chr5_3:54601248-54601267 | None:intergenic | 25.0% |
! | ACCCATTTAATGTGTAATTT+AGG | + | chr5_3:54601247-54601266 | Msa0818630:intron | 25.0% |
! | CTCCTAAATTACACATTAAA+TGG | - | chr5_3:54601252-54601271 | None:intergenic | 25.0% |
!! | TTCATGGTTTGGATATAATA+TGG | + | chr5_3:54601571-54601590 | Msa0818630:intron | 25.0% |
! | AATCTGGATTTCTGTAAAAA+TGG | - | chr5_3:54601703-54601722 | None:intergenic | 25.0% |
! | TGACATATCATATTAGTTAG+AGG | - | chr5_3:54601779-54601798 | None:intergenic | 25.0% |
! | TTTAGGCTTAATTCGATATT+TGG | + | chr5_3:54602042-54602061 | Msa0818630:intron | 25.0% |
! | AAAACAACAAATTAGTTAGG+GGG | - | chr5_3:54602882-54602901 | None:intergenic | 25.0% |
! | GAAAACAACAAATTAGTTAG+GGG | - | chr5_3:54602881-54602900 | None:intergenic | 25.0% |
!! | TTTTGCTTCAGTTTTCAAAA+AGG | - | chr5_3:54602200-54602219 | None:intergenic | 25.0% |
!! | AGATTTAAAATTTGGAACAG+TGG | + | chr5_3:54602316-54602335 | Msa0818630:intron | 25.0% |
!! | GATTTAAAATTTGGAACAGT+GGG | + | chr5_3:54602317-54602336 | Msa0818630:intron | 25.0% |
! | TTGTATGAAGAAATTAGGAA+AGG | + | chr5_3:54602384-54602403 | Msa0818630:intron | 25.0% |
! | TGTATGAAGAAATTAGGAAA+GGG | + | chr5_3:54602385-54602404 | Msa0818630:intron | 25.0% |
! | ATGAGAAAAATGGAATTTGA+CGG | + | chr5_3:54602753-54602772 | Msa0818630:intron | 25.0% |
! | AATTTGACGGAAATGATTAA+CGG | + | chr5_3:54602766-54602785 | Msa0818630:intron | 25.0% |
! | AAAACTGAAGCAAAAATTGA+GGG | + | chr5_3:54602205-54602224 | Msa0818630:intron | 25.0% |
! | GAAAACAACAAATTAGTTAG+GGG | + | chr5_3:54602881-54602900 | Msa0818630:intron | 25.0% |
! | ATGTGGAATAGCAAAAAAAT+GGG | + | chr5_3:54603114-54603133 | Msa0818630:intron | 25.0% |
! | CCAAAAAGAAAAAGTCATAT+GGG | + | chr5_3:54603323-54603342 | Msa0818630:intron | 25.0% |
! | AGCTATAACTCGTAAAAATA+AGG | - | chr5_3:54603367-54603386 | None:intergenic | 25.0% |
! | CAAATATGTTACTGTGATAA+TGG | - | chr5_3:54603543-54603562 | None:intergenic | 25.0% |
! | CAGTAACATATTTGCAATTA+TGG | + | chr5_3:54603549-54603568 | Msa0818630:intron | 25.0% |
! | CAAATATGTTACTGTGATAA+TGG | - | chr5_3:54603543-54603562 | None:intergenic | 25.0% |
! | AAAGGTTATTACAGCAAAAT+TGG | - | chr5_3:54603611-54603630 | None:intergenic | 25.0% |
! | AATTTCAACAAGTTGCAAAA+AGG | - | chr5_3:54603629-54603648 | None:intergenic | 25.0% |
!!! | TTTTGCAACTTGTTGAAATT+TGG | + | chr5_3:54603629-54603648 | Msa0818630:intron | 25.0% |
!!! | TTTGCAACTTGTTGAAATTT+GGG | + | chr5_3:54603630-54603649 | Msa0818630:intron | 25.0% |
! | GCTGTATTATAAAATCCAAA+AGG | - | chr5_3:54604550-54604569 | None:intergenic | 25.0% |
! | AAGTAAAACTAACCAAAAGT+TGG | + | chr5_3:54605069-54605088 | Msa0818630:intron | 25.0% |
! | AGTAAAACTAACCAAAAGTT+GGG | + | chr5_3:54605070-54605089 | Msa0818630:intron | 25.0% |
! | AATTGAAGTGAAAATGTCAA+AGG | + | chr5_3:54605105-54605124 | Msa0818630:intron | 25.0% |
! | TAAATATAGAGAGGACTTTA+GGG | + | chr5_3:54605135-54605154 | Msa0818630:intron | 25.0% |
! | CCTGATAATATAATTACATG+AGG | - | chr5_3:54605246-54605265 | None:intergenic | 25.0% |
! | CCTCATGTAATTATATTATC+AGG | + | chr5_3:54605243-54605262 | Msa0818630:intron | 25.0% |
!!! | ATTGATATTTTGAGTATGTC+GGG | + | chr5_3:54605473-54605492 | Msa0818630:intron | 25.0% |
!! | CTAACTATTTTCACATTCTT+AGG | + | chr5_3:54605603-54605622 | Msa0818630:CDS | 25.0% |
!!! | TAGTTTGGATTTTAGGGTTT+GGG | - | chr5_3:54598631-54598650 | None:intergenic | 30.0% |
! | ATTGCGTAGTTTGGATTTTA+GGG | - | chr5_3:54598637-54598656 | None:intergenic | 30.0% |
!! | GATTATCCAATCTTTGGTTT+TGG | - | chr5_3:54598748-54598767 | None:intergenic | 30.0% |
TCAAATAAGAAAGTTACCGA+GGG | - | chr5_3:54598990-54599009 | None:intergenic | 30.0% | |
ATCAAATAAGAAAGTTACCG+AGG | - | chr5_3:54598991-54599010 | None:intergenic | 30.0% | |
TGAAAGTAATCACATTTGTC+TGG | + | chr5_3:54599118-54599137 | Msa0818630:intron | 30.0% | |
GAAAGTAATCACATTTGTCT+GGG | + | chr5_3:54599119-54599138 | Msa0818630:intron | 30.0% | |
!! | ATTTTAAAAACCGAACTCCA+TGG | + | chr5_3:54599249-54599268 | Msa0818630:intron | 30.0% |
AATTCAATAGACTCACATGT+TGG | + | chr5_3:54599504-54599523 | Msa0818630:intron | 30.0% | |
! | GTATAAAGATTTTTATGCCC+TGG | + | chr5_3:54599581-54599600 | Msa0818630:intron | 30.0% |
GCATCATGAAGTAATTTGAT+TGG | + | chr5_3:54599673-54599692 | Msa0818630:intron | 30.0% | |
!!! | ATGTTGCTTTTTGTAGGTTA+AGG | + | chr5_3:54599951-54599970 | Msa0818630:intron | 30.0% |
! | GTTAAGTACAAGAACCTTTT+TGG | + | chr5_3:54599994-54600013 | Msa0818630:CDS | 30.0% |
!!! | TACAAGAACCTTTTTGGTTA+TGG | + | chr5_3:54600000-54600019 | Msa0818630:CDS | 30.0% |
ATAGATCACCATAACCAAAA+AGG | - | chr5_3:54600011-54600030 | None:intergenic | 30.0% | |
!!! | TTTTTGGTTATGGTGATCTA+TGG | + | chr5_3:54600010-54600029 | Msa0818630:CDS | 30.0% |
!! | TTTTGGTTATGGTGATCTAT+GGG | + | chr5_3:54600011-54600030 | Msa0818630:CDS | 30.0% |
!! | ACAAAAGCATATCCTTTTGT+AGG | - | chr5_3:54600372-54600391 | None:intergenic | 30.0% |
GTAGAAGAATTAATCTAACC+TGG | - | chr5_3:54600452-54600471 | None:intergenic | 30.0% | |
!!! | ATAAATTTTTGGGGTATGGT+AGG | + | chr5_3:54600659-54600678 | Msa0818630:intron | 30.0% |
TATTGGCACTAAAACTTCAT+TGG | + | chr5_3:54600859-54600878 | Msa0818630:intron | 30.0% | |
ATTGGATGTTTAGATACTTG+TGG | + | chr5_3:54600877-54600896 | Msa0818630:intron | 30.0% | |
AAACTCATCAAAGAAACACA+AGG | - | chr5_3:54600903-54600922 | None:intergenic | 30.0% | |
CAAACATTCATTCATTGGAT+GGG | - | chr5_3:54601048-54601067 | None:intergenic | 30.0% | |
ATTATGTGCATGATTCATAG+AGG | + | chr5_3:54601113-54601132 | Msa0818630:intron | 30.0% | |
TGATTTCCATTAGATTACCT+TGG | - | chr5_3:54601176-54601195 | None:intergenic | 30.0% | |
!!! | TAGGTTAACGGATGATTTTT+TGG | - | chr5_3:54601212-54601231 | None:intergenic | 30.0% |
ATTAAATGGGTGGTTTAGTT+GGG | - | chr5_3:54601238-54601257 | None:intergenic | 30.0% | |
TAATTTAGGAGAAAACATGC+AGG | + | chr5_3:54601261-54601280 | Msa0818630:intron | 30.0% | |
AACATGCAGGACTAAAATTA+CGG | + | chr5_3:54601274-54601293 | Msa0818630:intron | 30.0% | |
ATACTTCTATTACTCGTCAA+GGG | - | chr5_3:54601427-54601446 | None:intergenic | 30.0% | |
AATACTTCTATTACTCGTCA+AGG | - | chr5_3:54601428-54601447 | None:intergenic | 30.0% | |
GACTGTTAAGACATTCATAA+AGG | - | chr5_3:54601452-54601471 | None:intergenic | 30.0% | |
TTATAGGATACTTCCACATA+TGG | - | chr5_3:54601547-54601566 | None:intergenic | 30.0% | |
!! | ATGTGGAAGTATCCTATAAT+AGG | + | chr5_3:54601548-54601567 | Msa0818630:intron | 30.0% |
AGTATCCTATAATAGGTTCA+TGG | + | chr5_3:54601555-54601574 | Msa0818630:intron | 30.0% | |
! | TTGGACATCTGTTTTATAAC+TGG | + | chr5_3:54601630-54601649 | Msa0818630:intron | 30.0% |
! | CTGGTTGATTTAAATAGAGT+TGG | - | chr5_3:54601675-54601694 | None:intergenic | 30.0% |
TTCTGTAAAAATGGTTTAGC+TGG | - | chr5_3:54601694-54601713 | None:intergenic | 30.0% | |
GTTAAAACAATGGGCATAAA+AGG | + | chr5_3:54602227-54602246 | Msa0818630:intron | 30.0% | |
!!! | AGGTCCATTGTTTTAAATGT+CGG | + | chr5_3:54602247-54602266 | Msa0818630:intron | 30.0% |
GAAAACTGAAGCAAAAATTG+AGG | + | chr5_3:54602204-54602223 | Msa0818630:intron | 30.0% | |
AGAAGGCTTAATTCGATATT+TGG | - | chr5_3:54602908-54602927 | None:intergenic | 30.0% | |
CAAAATCTTTAATACTGGGA+AGG | - | chr5_3:54602988-54603007 | None:intergenic | 30.0% | |
AACAAAATCTTTAACACGGA+AGG | - | chr5_3:54603063-54603082 | None:intergenic | 30.0% | |
CATGTGGAATAGCAAAAAAA+TGG | + | chr5_3:54603113-54603132 | Msa0818630:intron | 30.0% | |
TAGCAAAAAAATGGGTATCT+TGG | + | chr5_3:54603122-54603141 | Msa0818630:intron | 30.0% | |
GCCAAAAAGAAAAAGTCATA+TGG | + | chr5_3:54603322-54603341 | Msa0818630:intron | 30.0% | |
!! | CCCATATGACTTTTTCTTTT+TGG | - | chr5_3:54603326-54603345 | None:intergenic | 30.0% |
AAGAAAAAGTCATATGGGAT+TGG | + | chr5_3:54603328-54603347 | Msa0818630:intron | 30.0% | |
! | TCTTATGACTGATTCCTTTA+TGG | - | chr5_3:54603426-54603445 | None:intergenic | 30.0% |
!! | TTGCAACTTGTTGAAATTTG+GGG | + | chr5_3:54603631-54603650 | Msa0818630:intron | 30.0% |
! | ATAGGCTCTGATTTGAAATT+TGG | + | chr5_3:54604208-54604227 | Msa0818630:intron | 30.0% |
! | TAGGCTCTGATTTGAAATTT+GGG | + | chr5_3:54604209-54604228 | Msa0818630:intron | 30.0% |
CTTGAGATGAGTTTATAAAG+AGG | - | chr5_3:54604281-54604300 | None:intergenic | 30.0% | |
TCCTGCATTAGAAGAAATAA+CGG | - | chr5_3:54604505-54604524 | None:intergenic | 30.0% | |
TTTATGGGGATTCAAAACTA+GGG | + | chr5_3:54604705-54604724 | Msa0818630:CDS | 30.0% | |
TAATGGGAAGATCAAAAGAT+AGG | - | chr5_3:54604831-54604850 | None:intergenic | 30.0% | |
! | TATCTTTTGATCTTCCCATT+AGG | + | chr5_3:54604830-54604849 | Msa0818630:CDS | 30.0% |
GTAAAACTAACCAAAAGTTG+GGG | + | chr5_3:54605071-54605090 | Msa0818630:intron | 30.0% | |
TAAAACTAACCAAAAGTTGG+GGG | + | chr5_3:54605072-54605091 | Msa0818630:intron | 30.0% | |
CTAAATATAGAGAGGACTTT+AGG | + | chr5_3:54605134-54605153 | Msa0818630:intron | 30.0% | |
AATCATAATATTCTGATCCC+TGG | + | chr5_3:54605370-54605389 | Msa0818630:intron | 30.0% | |
TTTAATCTACCAACGAATCT+CGG | + | chr5_3:54605434-54605453 | Msa0818630:intron | 30.0% | |
!! | TTGATATTTTGAGTATGTCG+GGG | + | chr5_3:54605474-54605493 | Msa0818630:intron | 30.0% |
! | CTATTTTCACATTCTTAGGA+AGG | + | chr5_3:54605607-54605626 | Msa0818630:CDS | 30.0% |
!!! | TTGTTTGTTTTGTCATTGCA+TGG | + | chr5_3:54605746-54605765 | Msa0818630:three_prime_UTR | 30.0% |
ACAATATTAAGAGAGATGTG+TGG | + | chr5_3:54605808-54605827 | Msa0818630:three_prime_UTR | 30.0% | |
CAATATTAAGAGAGATGTGT+GGG | + | chr5_3:54605809-54605828 | Msa0818630:three_prime_UTR | 30.0% | |
! | ATGTTGTTGTTGGGTTTAGA+TGG | - | chr5_3:54598531-54598550 | None:intergenic | 35.0% |
!!! | AGTTTGGATTTTAGGGTTTG+GGG | - | chr5_3:54598630-54598649 | None:intergenic | 35.0% |
!!! | GTAGTTTGGATTTTAGGGTT+TGG | - | chr5_3:54598632-54598651 | None:intergenic | 35.0% |
! | GATTGCGTAGTTTGGATTTT+AGG | - | chr5_3:54598638-54598657 | None:intergenic | 35.0% |
!!! | ATCTTTGGTTTTGGTGTTTC+CGG | - | chr5_3:54598739-54598758 | None:intergenic | 35.0% |
GAAACACCAAAACCAAAGAT+TGG | + | chr5_3:54598739-54598758 | Msa0818630:CDS | 35.0% | |
AGCTTCGATTATCCAATCTT+TGG | - | chr5_3:54598754-54598773 | None:intergenic | 35.0% | |
ATAATCGAAGCTGAACTTGA+TGG | + | chr5_3:54598762-54598781 | Msa0818630:CDS | 35.0% | |
!! | TTGAGGTTTTTGATTCGTGT+AGG | + | chr5_3:54598856-54598875 | Msa0818630:CDS | 35.0% |
!! | TGAGGTTTTTGATTCGTGTA+GGG | + | chr5_3:54598857-54598876 | Msa0818630:CDS | 35.0% |
ACAACAACATTCGCAGTATT+CGG | - | chr5_3:54598912-54598931 | None:intergenic | 35.0% | |
TGTTGTTGATGTTGTTGAGA+CGG | + | chr5_3:54598926-54598945 | Msa0818630:CDS | 35.0% | |
TGGTGTTTATATGAAACCCT+CGG | + | chr5_3:54598971-54598990 | Msa0818630:intron | 35.0% | |
TCATGTTTGTGTAAATGCTC+CGG | - | chr5_3:54599054-54599073 | None:intergenic | 35.0% | |
! | GCACCGATACTTCTTATAAA+AGG | - | chr5_3:54599186-54599205 | None:intergenic | 35.0% |
TGACATGTCAATGATGAGTT+TGG | - | chr5_3:54599455-54599474 | None:intergenic | 35.0% | |
! | TAGGAACTAGCCTAAAAAAG+TGG | + | chr5_3:54599651-54599670 | Msa0818630:intron | 35.0% |
!!! | CTTCATGATGCCACTTTTTT+AGG | - | chr5_3:54599664-54599683 | None:intergenic | 35.0% |
! | CAAGGAGTTAATTGGTAACA+AGG | - | chr5_3:54599727-54599746 | None:intergenic | 35.0% |
CGCTTTCCTATATATACACA+AGG | - | chr5_3:54599745-54599764 | None:intergenic | 35.0% | |
ATTGAGGGATGAGAGATTTA+GGG | + | chr5_3:54599781-54599800 | Msa0818630:intron | 35.0% | |
TCTTACAAAGAGCAACTGTT+AGG | + | chr5_3:54600168-54600187 | Msa0818630:CDS | 35.0% | |
!! | CATTTGTGATGGATCTGTTA+AGG | - | chr5_3:54600256-54600275 | None:intergenic | 35.0% |
CTTAACAGATCCATCACAAA+TGG | + | chr5_3:54600254-54600273 | Msa0818630:CDS | 35.0% | |
AAATGGCATCAAGGTCTATA+AGG | + | chr5_3:54600271-54600290 | Msa0818630:CDS | 35.0% | |
ATAGGAGAGATTCACGTATT+AGG | + | chr5_3:54600346-54600365 | Msa0818630:CDS | 35.0% | |
TTTGTTTCCACAACTCACTT+TGG | + | chr5_3:54600387-54600406 | Msa0818630:CDS | 35.0% | |
AGGTGTTCATTTCCTTTATC+AGG | + | chr5_3:54600679-54600698 | Msa0818630:intron | 35.0% | |
GGTGTTCATTTCCTTTATCA+GGG | + | chr5_3:54600680-54600699 | Msa0818630:intron | 35.0% | |
GAAATTCTCTTCCCTGATAA+AGG | - | chr5_3:54600694-54600713 | None:intergenic | 35.0% | |
AGATTCTCTTCTATGGAAAG+AGG | - | chr5_3:54600721-54600740 | None:intergenic | 35.0% | |
GAACAACAGATTCTCTTCTA+TGG | - | chr5_3:54600728-54600747 | None:intergenic | 35.0% | |
GGATTTCAACATGATAGCAA+TGG | - | chr5_3:54600758-54600777 | None:intergenic | 35.0% | |
!! | TTATGGTCTTATGGAGATAG+AGG | + | chr5_3:54600798-54600817 | Msa0818630:intron | 35.0% |
!! | TATGGTCTTATGGAGATAGA+GGG | + | chr5_3:54600799-54600818 | Msa0818630:intron | 35.0% |
! | ACTTTTATGATTATTCCCCG+AGG | - | chr5_3:54600840-54600859 | None:intergenic | 35.0% |
!! | ACATTTTGGTACAATTGCCT+AGG | + | chr5_3:54600947-54600966 | Msa0818630:intron | 35.0% |
!! | CATTTTGGTACAATTGCCTA+GGG | + | chr5_3:54600948-54600967 | Msa0818630:intron | 35.0% |
AGATCAAATCCCTGCAAAAT+TGG | - | chr5_3:54601020-54601039 | None:intergenic | 35.0% | |
CCAAACATTCATTCATTGGA+TGG | - | chr5_3:54601049-54601068 | None:intergenic | 35.0% | |
CCATCCAATGAATGAATGTT+TGG | + | chr5_3:54601046-54601065 | Msa0818630:intron | 35.0% | |
ATTCCACCAAGGTAATCTAA+TGG | + | chr5_3:54601167-54601186 | Msa0818630:intron | 35.0% | |
TTTCCATTAGATTACCTTGG+TGG | - | chr5_3:54601173-54601192 | None:intergenic | 35.0% | |
! | TTAGTTGGGTTGTAGGTTAA+CGG | - | chr5_3:54601224-54601243 | None:intergenic | 35.0% |
CATTAAATGGGTGGTTTAGT+TGG | - | chr5_3:54601239-54601258 | None:intergenic | 35.0% | |
GACTAAAATTACGGTGATGA+TGG | + | chr5_3:54601283-54601302 | Msa0818630:intron | 35.0% | |
! | TATTCTACACAAAAGCATGC+AGG | - | chr5_3:54601322-54601341 | None:intergenic | 35.0% |
! | GGATTGTTTGGTTGACTTAT+AGG | + | chr5_3:54601354-54601373 | Msa0818630:intron | 35.0% |
TAGGCTTATTGATCATTCTC+TGG | + | chr5_3:54601373-54601392 | Msa0818630:intron | 35.0% | |
!! | TCTCTGGTTCATTTTACTCT+TGG | + | chr5_3:54601389-54601408 | Msa0818630:intron | 35.0% |
! | ACAGTCACAATTTTTCGTTC+AGG | + | chr5_3:54601466-54601485 | Msa0818630:intron | 35.0% |
! | TCACAATTTTTCGTTCAGGT+GGG | + | chr5_3:54601470-54601489 | Msa0818630:intron | 35.0% |
TAGAAGGTAATACGTTCTGA+GGG | + | chr5_3:54601500-54601519 | Msa0818630:intron | 35.0% | |
CATATGGAATGAGTTGTAAG+TGG | - | chr5_3:54601531-54601550 | None:intergenic | 35.0% | |
CTTACAACTCATTCCATATG+TGG | + | chr5_3:54601531-54601550 | Msa0818630:intron | 35.0% | |
CCAAACCATGAACCTATTAT+AGG | - | chr5_3:54601563-54601582 | None:intergenic | 35.0% | |
CCTATAATAGGTTCATGGTT+TGG | + | chr5_3:54601560-54601579 | Msa0818630:intron | 35.0% | |
ATGTCAAGATGATGCATTCT+TGG | + | chr5_3:54601793-54601812 | Msa0818630:intron | 35.0% | |
! | TTCAGTTTTCAAAAAGGTCC+CGG | - | chr5_3:54602194-54602213 | None:intergenic | 35.0% |
! | TGGACCGACATTTAAAACAA+TGG | - | chr5_3:54602254-54602273 | None:intergenic | 35.0% |
AATTAGGAAAGGGAGCTTAT+AGG | + | chr5_3:54602395-54602414 | Msa0818630:intron | 35.0% | |
!!! | TGAGGAGAGAAGAACTTTTT+TGG | + | chr5_3:54602661-54602680 | Msa0818630:intron | 35.0% |
! | AGAGAGAAGAAGAACTTTTC+TGG | + | chr5_3:54602694-54602713 | Msa0818630:intron | 35.0% |
! | GAGAGAAGAAGAACTTTTCT+GGG | + | chr5_3:54602695-54602714 | Msa0818630:intron | 35.0% |
GATTAACGGCAGTTACTTAT+TGG | + | chr5_3:54602780-54602799 | Msa0818630:intron | 35.0% | |
!! | TTGTTCTTAGACTGCTTTTG+TGG | + | chr5_3:54603005-54603024 | Msa0818630:intron | 35.0% |
!!! | GTGGTTTTAGCAAATACATG+TGG | + | chr5_3:54603097-54603116 | Msa0818630:intron | 35.0% |
ACCATATGTGAATCTATTGC+AGG | + | chr5_3:54603189-54603208 | Msa0818630:intron | 35.0% | |
TCCTGCAATAGATTCACATA+TGG | - | chr5_3:54603193-54603212 | None:intergenic | 35.0% | |
CTTTAGTGCAATAATAGGAG+TGG | - | chr5_3:54603287-54603306 | None:intergenic | 35.0% | |
! | GAGAGCTTTAGTGCAATAAT+AGG | - | chr5_3:54603292-54603311 | None:intergenic | 35.0% |
!!! | TTTCTTTTTGGCTTTCCTCA+AGG | - | chr5_3:54603314-54603333 | None:intergenic | 35.0% |
! | ATGGCAACTACATTGTTGTT+GGG | - | chr5_3:54603407-54603426 | None:intergenic | 35.0% |
TATGGCAACTACATTGTTGT+TGG | - | chr5_3:54603408-54603427 | None:intergenic | 35.0% | |
CAACAATGTAGTTGCCATAA+AGG | + | chr5_3:54603409-54603428 | Msa0818630:intron | 35.0% | |
!!! | CGGTCTTATTATTGTTTTCC+TGG | + | chr5_3:54603454-54603473 | Msa0818630:intron | 35.0% |
TTAACCCATCCTTACAAAAC+CGG | + | chr5_3:54603655-54603674 | Msa0818630:intron | 35.0% | |
CTAACCAAAGGTTGCAATTT+AGG | + | chr5_3:54603767-54603786 | Msa0818630:intron | 35.0% | |
GTTTCCTAAATTGCAACCTT+TGG | - | chr5_3:54603774-54603793 | None:intergenic | 35.0% | |
AGGTTGCAATTTAGGAAACT+AGG | + | chr5_3:54603775-54603794 | Msa0818630:intron | 35.0% | |
GGTTGCAATTTAGGAAACTA+GGG | + | chr5_3:54603776-54603795 | Msa0818630:intron | 35.0% | |
GTTGCAATTTAGGAAACTAG+GGG | + | chr5_3:54603777-54603796 | Msa0818630:intron | 35.0% | |
CTAACCAAAGGTTGCAATTT+AGG | + | chr5_3:54603767-54603786 | Msa0818630:intron | 35.0% | |
CTAACCAAAGGTTGCAATTT+AGG | + | chr5_3:54603767-54603786 | Msa0818630:intron | 35.0% | |
CCTATCCTAGATATATCGTT+GGG | - | chr5_3:54604193-54604212 | None:intergenic | 35.0% | |
! | AGGCTCTGATTTGAAATTTG+GGG | + | chr5_3:54604210-54604229 | Msa0818630:intron | 35.0% |
CTAACTCATCCTTACAAAAC+CGG | + | chr5_3:54604234-54604253 | Msa0818630:intron | 35.0% | |
GAGATGAGTTTATAAAGAGG+AGG | - | chr5_3:54604278-54604297 | None:intergenic | 35.0% | |
CTAACCAAAGGTTGCAATTT+AGG | + | chr5_3:54603767-54603786 | Msa0818630:intron | 35.0% | |
!! | TCCGTTATTTCTTCTAATGC+AGG | + | chr5_3:54604501-54604520 | Msa0818630:intron | 35.0% |
! | TATAATACAGCACTGAACCT+TGG | + | chr5_3:54604559-54604578 | Msa0818630:CDS | 35.0% |
ACCACCCAAATAAAACCTTT+CGG | - | chr5_3:54604647-54604666 | None:intergenic | 35.0% | |
TTGAATCCCCATAAAGTTCT+TGG | - | chr5_3:54604700-54604719 | None:intergenic | 35.0% | |
CTTTATGGGGATTCAAAACT+AGG | + | chr5_3:54604704-54604723 | Msa0818630:CDS | 35.0% | |
TTATGGGGATTCAAAACTAG+GGG | + | chr5_3:54604706-54604725 | Msa0818630:CDS | 35.0% | |
TTGAGAGAACAAGGAATACA+TGG | + | chr5_3:54604856-54604875 | Msa0818630:CDS | 35.0% | |
! | ATACATGGACACATTTTTGC+TGG | + | chr5_3:54604871-54604890 | Msa0818630:CDS | 35.0% |
! | GAAAGTTCCTAGACTCTTTT+CGG | + | chr5_3:54604947-54604966 | Msa0818630:CDS | 35.0% |
TAAAACTGAAGCTAACCTCT+AGG | - | chr5_3:54605017-54605036 | None:intergenic | 35.0% | |
GGTGTAGTCTAAATATAGAG+AGG | + | chr5_3:54605126-54605145 | Msa0818630:intron | 35.0% | |
! | TTGGACATTGGAAAGTATGA+AGG | + | chr5_3:54605177-54605196 | Msa0818630:intron | 35.0% |
! | ATTGGAAAGTATGAAGGAGA+GGG | + | chr5_3:54605183-54605202 | Msa0818630:intron | 35.0% |
CATGAGGAATGCAATTTCTA+GGG | - | chr5_3:54605230-54605249 | None:intergenic | 35.0% | |
ACATGAGGAATGCAATTTCT+AGG | - | chr5_3:54605231-54605250 | None:intergenic | 35.0% | |
TTAATCTACCAACGAATCTC+GGG | + | chr5_3:54605435-54605454 | Msa0818630:intron | 35.0% | |
CCTGAAAAAACAAGTAATGC+TGG | - | chr5_3:54605583-54605602 | None:intergenic | 35.0% | |
!!! | CCAGCATTACTTGTTTTTTC+AGG | + | chr5_3:54605580-54605599 | Msa0818630:intron | 35.0% |
!! | TTTAAGAGCGCTACAAAATC+AGG | - | chr5_3:54605716-54605735 | None:intergenic | 35.0% |
GATGTGTGGGAAAAAGTTTA+AGG | + | chr5_3:54605822-54605841 | Msa0818630:three_prime_UTR | 35.0% | |
! | TCATCGTCGATGTTGTTGTT+GGG | - | chr5_3:54598540-54598559 | None:intergenic | 40.0% |
TTCATCGTCGATGTTGTTGT+TGG | - | chr5_3:54598541-54598560 | None:intergenic | 40.0% | |
!!! | GATTTTAGGGTTTGGGGATT+TGG | - | chr5_3:54598624-54598643 | None:intergenic | 40.0% |
! | GAAACGTTGATTGCGTAGTT+TGG | - | chr5_3:54598646-54598665 | None:intergenic | 40.0% |
! | GACTCGAATTGGAACTTGTT+CGG | - | chr5_3:54598700-54598719 | None:intergenic | 40.0% |
!! | AGTAAGCTTACTGGTGGATT+TGG | + | chr5_3:54598951-54598970 | Msa0818630:CDS | 40.0% |
AGTAATCACATTTGTCTGGG+TGG | + | chr5_3:54599122-54599141 | Msa0818630:intron | 40.0% | |
!! | AAGAAGTATCGGTGCTATAG+AGG | + | chr5_3:54599191-54599210 | Msa0818630:intron | 40.0% |
AATGCAGCTGTACCATGATT+TGG | + | chr5_3:54599335-54599354 | Msa0818630:intron | 40.0% | |
TATCAGACACTGACACATGT+TGG | + | chr5_3:54599527-54599546 | Msa0818630:intron | 40.0% | |
ATACTGACACTTGTGATCGT+AGG | - | chr5_3:54599565-54599584 | None:intergenic | 40.0% | |
TAGGAAAGCGATGAATCAAG+TGG | + | chr5_3:54599755-54599774 | Msa0818630:intron | 40.0% | |
AGGAAAGCGATGAATCAAGT+GGG | + | chr5_3:54599756-54599775 | Msa0818630:intron | 40.0% | |
ATGAATCAAGTGGGAGATTG+AGG | + | chr5_3:54599765-54599784 | Msa0818630:intron | 40.0% | |
TGAATCAAGTGGGAGATTGA+GGG | + | chr5_3:54599766-54599785 | Msa0818630:intron | 40.0% | |
GATTGAGGGATGAGAGATTT+AGG | + | chr5_3:54599780-54599799 | Msa0818630:intron | 40.0% | |
! | GCTTTTTGTAGGTTAAGGCA+TGG | + | chr5_3:54599956-54599975 | Msa0818630:intron | 40.0% |
TGATCTATGGGATGCTTCTT+TGG | + | chr5_3:54600023-54600042 | Msa0818630:CDS | 40.0% | |
GTTAACAATCCTTTCAGACG+AGG | - | chr5_3:54600096-54600115 | None:intergenic | 40.0% | |
AGGATTGTTAACTCCACTTG+TGG | + | chr5_3:54600104-54600123 | Msa0818630:CDS | 40.0% | |
CATGCTTTCTCAAGATTTGC+AGG | + | chr5_3:54600137-54600156 | Msa0818630:CDS | 40.0% | |
ATCCATCACAAATGGCATCA+AGG | + | chr5_3:54600262-54600281 | Msa0818630:CDS | 40.0% | |
TCACGTATTAGGCCTACAAA+AGG | + | chr5_3:54600357-54600376 | Msa0818630:CDS | 40.0% | |
! | TTCTTTGAGAGTGAGATGCT+AGG | + | chr5_3:54600921-54600940 | Msa0818630:intron | 40.0% |
! | GAGATGCTAGGATCACATTT+TGG | + | chr5_3:54600933-54600952 | Msa0818630:intron | 40.0% |
! | CTGTTACAGCCAATTTTGCA+GGG | + | chr5_3:54601008-54601027 | Msa0818630:intron | 40.0% |
! | GTCACAATTTTTCGTTCAGG+TGG | + | chr5_3:54601469-54601488 | Msa0818630:intron | 40.0% |
!!! | TCAGGTGGGTTTTTTCTAGA+AGG | + | chr5_3:54601484-54601503 | Msa0818630:intron | 40.0% |
CTAGAAGGTAATACGTTCTG+AGG | + | chr5_3:54601499-54601518 | Msa0818630:intron | 40.0% | |
TTTAACCTGTGTAGCCACTT+TGG | + | chr5_3:54601594-54601613 | Msa0818630:intron | 40.0% | |
AGATGTCCAAATTGAGTTCG+TGG | - | chr5_3:54601620-54601639 | None:intergenic | 40.0% | |
! | AAAATTTGGAACAGTGGGCA+TGG | + | chr5_3:54602322-54602341 | Msa0818630:intron | 40.0% |
ATAGGAGGTTGAAAACGTGA+AGG | + | chr5_3:54602413-54602432 | Msa0818630:intron | 40.0% | |
!!! | GGAGAGAAGAACTTTTTTGG+TGG | + | chr5_3:54602664-54602683 | Msa0818630:intron | 40.0% |
!!! | GAGAAGAACTTTTTTGGTGG+TGG | + | chr5_3:54602667-54602686 | Msa0818630:intron | 40.0% |
AACGGCAGTTACTTATTGGA+CGG | + | chr5_3:54602784-54602803 | Msa0818630:intron | 40.0% | |
CAGTTACTTATTGGACGGAA+AGG | + | chr5_3:54602789-54602808 | Msa0818630:intron | 40.0% | |
ATACTGGGAAGGAAAACACA+AGG | - | chr5_3:54602977-54602996 | None:intergenic | 40.0% | |
ATAAAGATCCTACGATTGCC+AGG | + | chr5_3:54603149-54603168 | Msa0818630:intron | 40.0% | |
TAAAGATCCTACGATTGCCA+GGG | + | chr5_3:54603150-54603169 | Msa0818630:intron | 40.0% | |
TCTCTTGCACATGCAAGATA+AGG | - | chr5_3:54603218-54603237 | None:intergenic | 40.0% | |
!! | ATATGGGATTGGCTTGTCAT+CGG | + | chr5_3:54603339-54603358 | Msa0818630:intron | 40.0% |
! | ACATTGTTGTTGGGTTACCT+TGG | - | chr5_3:54603398-54603417 | None:intergenic | 40.0% |
TCAGTCATAAGACTCACAGT+CGG | + | chr5_3:54603434-54603453 | Msa0818630:intron | 40.0% | |
! | TTTTCCTGGTGAGATTCTGT+GGG | + | chr5_3:54603468-54603487 | Msa0818630:intron | 40.0% |
!! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr5_3:54603724-54603743 | None:intergenic | 40.0% |
!! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr5_3:54603725-54603744 | None:intergenic | 40.0% |
CTGCAATTAAGGCTAACCAA+AGG | + | chr5_3:54603755-54603774 | Msa0818630:intron | 40.0% | |
TGGAAATTCCGCCTTAATTG+CGG | - | chr5_3:54603820-54603839 | None:intergenic | 40.0% | |
!! | CTTTGGTTAGCCTTATCGTT+GGG | - | chr5_3:54603906-54603925 | None:intergenic | 40.0% |
!! | CACTTTCATTGTGTTGGCTT+TGG | - | chr5_3:54603923-54603942 | None:intergenic | 40.0% |
! | AGCCAACACAATGAAAGTGT+TGG | + | chr5_3:54603924-54603943 | Msa0818630:intron | 40.0% |
CTCCAACACTTTCATTGTGT+TGG | - | chr5_3:54603929-54603948 | None:intergenic | 40.0% | |
!! | CAACACAATGAAAGTGTTGG+AGG | + | chr5_3:54603927-54603946 | Msa0818630:intron | 40.0% |
CTGCAATTAAGGCTAACCAA+AGG | + | chr5_3:54603755-54603774 | Msa0818630:intron | 40.0% | |
GTTGCCTAAATTGCAACCTT+TGG | - | chr5_3:54603969-54603988 | None:intergenic | 40.0% | |
AGGTTGCAATTTAGGCAACT+AGG | + | chr5_3:54603970-54603989 | Msa0818630:intron | 40.0% | |
GGTTGCAATTTAGGCAACTA+GGG | + | chr5_3:54603971-54603990 | Msa0818630:intron | 40.0% | |
GTTGCAATTTAGGCAACTAG+GGG | + | chr5_3:54603972-54603991 | Msa0818630:intron | 40.0% | |
!! | GCTTTGGTTAGCCTTAATTG+CGG | - | chr5_3:54604015-54604034 | None:intergenic | 40.0% |
AACCAAAGCCAACACAATGA+AGG | + | chr5_3:54603918-54603937 | Msa0818630:intron | 40.0% | |
CTGCAATTAAGGCTAACCAA+AGG | + | chr5_3:54603755-54603774 | Msa0818630:intron | 40.0% | |
GTTGCCTAAATTGCAACCTT+TGG | - | chr5_3:54603969-54603988 | None:intergenic | 40.0% | |
AGGTTGCAATTTAGGCAACT+AGG | + | chr5_3:54603970-54603989 | Msa0818630:intron | 40.0% | |
GGTTGCAATTTAGGCAACTA+GGG | + | chr5_3:54603971-54603990 | Msa0818630:intron | 40.0% | |
GTTGCAATTTAGGCAACTAG+GGG | + | chr5_3:54603972-54603991 | Msa0818630:intron | 40.0% | |
TATTGGAAATTCCGCCATTG+CGG | - | chr5_3:54604110-54604129 | None:intergenic | 40.0% | |
! | CCCAACGATATATCTAGGAT+AGG | + | chr5_3:54604190-54604209 | Msa0818630:intron | 40.0% |
GCCTATCCTAGATATATCGT+TGG | - | chr5_3:54604194-54604213 | None:intergenic | 40.0% | |
!! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr5_3:54604236-54604255 | None:intergenic | 40.0% |
!! | TTCATTGTGTTGGCTTTGAC+GGG | - | chr5_3:54604337-54604356 | None:intergenic | 40.0% |
!! | CTTCATTGTGTTGGCTTTGA+CGG | - | chr5_3:54603725-54603744 | None:intergenic | 40.0% |
CTGCAATTAAGGCTAACCAA+AGG | + | chr5_3:54603755-54603774 | Msa0818630:intron | 40.0% | |
TTGGAAATTCCGCCTTGATT+GGG | - | chr5_3:54604421-54604440 | None:intergenic | 40.0% | |
AAATAAAACCTTTCGGGGAG+GGG | - | chr5_3:54604640-54604659 | None:intergenic | 40.0% | |
CAAATAAAACCTTTCGGGGA+GGG | - | chr5_3:54604641-54604660 | None:intergenic | 40.0% | |
!!! | CTCCCCGAAAGGTTTTATTT+GGG | + | chr5_3:54604640-54604659 | Msa0818630:CDS | 40.0% |
CACCCAAATAAAACCTTTCG+GGG | - | chr5_3:54604645-54604664 | None:intergenic | 40.0% | |
CCACCCAAATAAAACCTTTC+GGG | - | chr5_3:54604646-54604665 | None:intergenic | 40.0% | |
TAAAGTTCTTGGTCCTCCTA+GGG | - | chr5_3:54604689-54604708 | None:intergenic | 40.0% | |
ATAAAGTTCTTGGTCCTCCT+AGG | - | chr5_3:54604690-54604709 | None:intergenic | 40.0% | |
TAGGAGGACCAAGAACTTTA+TGG | + | chr5_3:54604689-54604708 | Msa0818630:CDS | 40.0% | |
AGGAGGACCAAGAACTTTAT+GGG | + | chr5_3:54604690-54604709 | Msa0818630:CDS | 40.0% | |
!!! | TCATCTCTTTTTTGCCTTCG+CGG | - | chr5_3:54604748-54604767 | None:intergenic | 40.0% |
ATCACCTCCAATGAAGTCAA+GGG | - | chr5_3:54604785-54604804 | None:intergenic | 40.0% | |
! | CTTTTGATCTTCCCATTAGG+TGG | + | chr5_3:54604833-54604852 | Msa0818630:CDS | 40.0% |
TGTTCTCTCAACCACCTAAT+GGG | - | chr5_3:54604847-54604866 | None:intergenic | 40.0% | |
TTGTTCTCTCAACCACCTAA+TGG | - | chr5_3:54604848-54604867 | None:intergenic | 40.0% | |
ATTAGGTGGTTGAGAGAACA+AGG | + | chr5_3:54604847-54604866 | Msa0818630:CDS | 40.0% | |
!!! | GACACATTTTTGCTGGTTCT+GGG | + | chr5_3:54604878-54604897 | Msa0818630:CDS | 40.0% |
AAAGAGTCTAGGAACTTTCG+AGG | - | chr5_3:54604946-54604965 | None:intergenic | 40.0% | |
! | CATTGGAAAGTATGAAGGAG+AGG | + | chr5_3:54605182-54605201 | Msa0818630:intron | 40.0% |
CAGATTCAGAGCTAAAGCAA+TGG | + | chr5_3:54605275-54605294 | Msa0818630:intron | 40.0% | |
CAGATTCAGAGCTAAAGCAA+TGG | - | chr5_3:54605275-54605294 | None:intergenic | 40.0% | |
TTTGGAAGAACTTCAGTCCA+GGG | - | chr5_3:54605390-54605409 | None:intergenic | 40.0% | |
TAATCTACCAACGAATCTCG+GGG | + | chr5_3:54605436-54605455 | Msa0818630:intron | 40.0% | |
AAACAAGTAATGCTGGTGAG+AGG | - | chr5_3:54605576-54605595 | None:intergenic | 40.0% | |
! | TCGAATTGGAACTTGTTCGG+AGG | - | chr5_3:54598697-54598716 | None:intergenic | 45.0% |
CATGAGTTCCTGCATTGTAG+TGG | - | chr5_3:54598799-54598818 | None:intergenic | 45.0% | |
TGTAGGGTTAAGCTTGAAGC+TGG | + | chr5_3:54598873-54598892 | Msa0818630:CDS | 45.0% | |
CCAACGAGACTTCCAAATCA+TGG | - | chr5_3:54599350-54599369 | None:intergenic | 45.0% | |
! | CCATGATTTGGAAGTCTCGT+TGG | + | chr5_3:54599347-54599366 | Msa0818630:intron | 45.0% |
GCATATGTTGTACACAGCCA+GGG | - | chr5_3:54599601-54599620 | None:intergenic | 45.0% | |
TGCATATGTTGTACACAGCC+AGG | - | chr5_3:54599602-54599621 | None:intergenic | 45.0% | |
! | GTTAAGGCATGGACTACAGA+AGG | + | chr5_3:54599967-54599986 | Msa0818630:CDS | 45.0% |
! | TGGGATGCTTCTTTGGCTTA+TGG | + | chr5_3:54600030-54600049 | Msa0818630:CDS | 45.0% |
! | GATGCTTCTTTGGCTTATGG+CGG | + | chr5_3:54600033-54600052 | Msa0818630:CDS | 45.0% |
GTATATGCTCCTCGTCTGAA+AGG | + | chr5_3:54600084-54600103 | Msa0818630:CDS | 45.0% | |
TGTTAACTCCACTTGTGGCA+CGG | + | chr5_3:54600109-54600128 | Msa0818630:CDS | 45.0% | |
! | CTTGATATCGTCAAAGCACC+AGG | + | chr5_3:54600203-54600222 | Msa0818630:CDS | 45.0% |
!! | ACTTGGTGTACACTCTTGGA+TGG | + | chr5_3:54600226-54600245 | Msa0818630:CDS | 45.0% |
! | GACCTTGATGCCATTTGTGA+TGG | - | chr5_3:54600267-54600286 | None:intergenic | 45.0% |
TGGCATCAAGGTCTATAAGG+AGG | + | chr5_3:54600274-54600293 | Msa0818630:CDS | 45.0% | |
GTTTCCACAACTCACTTTGG+TGG | + | chr5_3:54600390-54600409 | Msa0818630:CDS | 45.0% | |
AAGACCACCAAAGTGAGTTG+TGG | - | chr5_3:54600397-54600416 | None:intergenic | 45.0% | |
CAACACTGTCACTCGTTAGA+AGG | - | chr5_3:54600532-54600551 | None:intergenic | 45.0% | |
GGATACTAGTTACTCTGCCT+CGG | + | chr5_3:54600820-54600839 | Msa0818630:intron | 45.0% | |
GATACTAGTTACTCTGCCTC+GGG | + | chr5_3:54600821-54600840 | Msa0818630:intron | 45.0% | |
ATACTAGTTACTCTGCCTCG+GGG | + | chr5_3:54600822-54600841 | Msa0818630:intron | 45.0% | |
TTGGTACAATTGCCTAGGGA+AGG | + | chr5_3:54600952-54600971 | Msa0818630:intron | 45.0% | |
CTCAAACCTCGTACTTGTGA+AGG | - | chr5_3:54600978-54600997 | None:intergenic | 45.0% | |
CTTCACAAGTACGAGGTTTG+AGG | + | chr5_3:54600976-54600995 | Msa0818630:intron | 45.0% | |
CCTGCAAAATTGGCTGTAAC+AGG | - | chr5_3:54601010-54601029 | None:intergenic | 45.0% | |
! | CCTGTTACAGCCAATTTTGC+AGG | + | chr5_3:54601007-54601026 | Msa0818630:intron | 45.0% |
!! | AATTACGGTGATGATGGCAG+TGG | + | chr5_3:54601289-54601308 | Msa0818630:intron | 45.0% |
AATTGAGTTCGTGGCCAAAG+TGG | - | chr5_3:54601611-54601630 | None:intergenic | 45.0% | |
CTTTGGCCACGAACTCAATT+TGG | + | chr5_3:54601611-54601630 | Msa0818630:intron | 45.0% | |
GTCAGTCCATTGTTTGTGTC+CGG | + | chr5_3:54602172-54602191 | Msa0818630:intron | 45.0% | |
TCAGTCCATTGTTTGTGTCC+GGG | + | chr5_3:54602173-54602192 | Msa0818630:intron | 45.0% | |
TAGGAAAGGGAGCTTATAGG+AGG | + | chr5_3:54602398-54602417 | Msa0818630:intron | 45.0% | |
!! | GAGCTTACTGGTTCAAGTTG+TGG | - | chr5_3:54603249-54603268 | None:intergenic | 45.0% |
TTGTGTGACTAGGAGCTTAC+TGG | - | chr5_3:54603261-54603280 | None:intergenic | 45.0% | |
GGAGTGGATATTGTGTGACT+AGG | - | chr5_3:54603271-54603290 | None:intergenic | 45.0% | |
TTGCACTAAAGCTCTCCTTG+AGG | + | chr5_3:54603296-54603315 | Msa0818630:intron | 45.0% | |
GTTATAGCTGTACGCAACCA+AGG | + | chr5_3:54603378-54603397 | Msa0818630:intron | 45.0% | |
! | GTTTTCCTGGTGAGATTCTG+TGG | + | chr5_3:54603467-54603486 | Msa0818630:intron | 45.0% |
AAAACCCACAGAATCTCACC+AGG | - | chr5_3:54603475-54603494 | None:intergenic | 45.0% | |
! | GATAATGGTCCATGCCTGAA+AGG | - | chr5_3:54603528-54603547 | None:intergenic | 45.0% |
!! | CAAGCCGGTTTTGTAAGGAT+GGG | - | chr5_3:54603662-54603681 | None:intergenic | 45.0% |
!! | ACAAGCCGGTTTTGTAAGGA+TGG | - | chr5_3:54603663-54603682 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr5_3:54603667-54603686 | None:intergenic | 45.0% |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr5_3:54603664-54603683 | Msa0818630:intron | 45.0% |
!! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr5_3:54603723-54603742 | None:intergenic | 45.0% |
!! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr5_3:54603726-54603745 | None:intergenic | 45.0% |
CCTCAAAGCCAACACAATGA+AGG | + | chr5_3:54603723-54603742 | Msa0818630:intron | 45.0% | |
! | AGCCAACACAATGAAGGTGT+TGG | + | chr5_3:54603729-54603748 | Msa0818630:intron | 45.0% |
CTCCAACACCTTCATTGTGT+TGG | - | chr5_3:54603734-54603753 | None:intergenic | 45.0% | |
!! | CAACACAATGAAGGTGTTGG+AGG | + | chr5_3:54603732-54603751 | Msa0818630:intron | 45.0% |
GCAATTTAGGAAACTAGGGG+CGG | + | chr5_3:54603780-54603799 | Msa0818630:intron | 45.0% | |
!! | GCTTTGGTTAGCCTTATCGT+TGG | - | chr5_3:54603907-54603926 | None:intergenic | 45.0% |
! | AGTGTTGGAGGCTGCAATTA+AGG | + | chr5_3:54603939-54603958 | Msa0818630:intron | 45.0% |
!! | CACCTTCATTGTGTTGGCTT+TGG | - | chr5_3:54603728-54603747 | None:intergenic | 45.0% |
! | AGCCAACACAATGAAGGTGT+TGG | + | chr5_3:54603729-54603748 | Msa0818630:intron | 45.0% |
CTCCAACACCTTCATTGTGT+TGG | - | chr5_3:54603734-54603753 | None:intergenic | 45.0% | |
!! | CAACACAATGAAGGTGTTGG+AGG | + | chr5_3:54603732-54603751 | Msa0818630:intron | 45.0% |
GGAAGCCCAACGATATATCT+AGG | + | chr5_3:54604185-54604204 | Msa0818630:intron | 45.0% | |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr5_3:54603667-54603686 | None:intergenic | 45.0% |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr5_3:54603664-54603683 | Msa0818630:intron | 45.0% |
! | AGAGTGCTATCTATCCGATG+TGG | + | chr5_3:54604299-54604318 | Msa0818630:intron | 45.0% |
GAGTGCTATCTATCCGATGT+GGG | + | chr5_3:54604300-54604319 | Msa0818630:intron | 45.0% | |
!! | TCATTGTGTTGGCTTTGACG+GGG | - | chr5_3:54604336-54604355 | None:intergenic | 45.0% |
CGTCAAAGCCAACACAATGA+AGG | + | chr5_3:54604336-54604355 | Msa0818630:intron | 45.0% | |
! | AGCCAACACAATGAAGGTGT+TGG | + | chr5_3:54603729-54603748 | Msa0818630:intron | 45.0% |
CTCCAACACCTTCATTGTGT+TGG | - | chr5_3:54603734-54603753 | None:intergenic | 45.0% | |
!! | CAACACAATGAAGGTGTTGG+AGG | + | chr5_3:54603732-54603751 | Msa0818630:intron | 45.0% |
GTCGCCTAAATTGCAACCTT+TGG | - | chr5_3:54604387-54604406 | None:intergenic | 45.0% | |
AGGTTGCAATTTAGGCGACT+AGG | + | chr5_3:54604388-54604407 | Msa0818630:intron | 45.0% | |
GGTTGCAATTTAGGCGACTA+GGG | + | chr5_3:54604389-54604408 | Msa0818630:intron | 45.0% | |
GTTGCAATTTAGGCGACTAG+GGG | + | chr5_3:54604390-54604409 | Msa0818630:intron | 45.0% | |
TGGAAATTCCGCCTTGATTG+GGG | - | chr5_3:54604420-54604439 | None:intergenic | 45.0% | |
GTTGGAAATTCCGCCTTGAT+TGG | - | chr5_3:54604422-54604441 | None:intergenic | 45.0% | |
CAGGAGTTTGATGTTCGCTT+TGG | + | chr5_3:54604520-54604539 | Msa0818630:intron | 45.0% | |
TGAACCTTGGCATATCTGCT+GGG | + | chr5_3:54604572-54604591 | Msa0818630:CDS | 45.0% | |
ATGGCTTAGTCCTAAACCCT+TGG | - | chr5_3:54604615-54604634 | None:intergenic | 45.0% | |
CCAAATAAAACCTTTCGGGG+AGG | - | chr5_3:54604642-54604661 | None:intergenic | 45.0% | |
!!! | CCTCCCCGAAAGGTTTTATT+TGG | + | chr5_3:54604639-54604658 | Msa0818630:CDS | 45.0% |
!!! | CCCGAAAGGTTTTATTTGGG+TGG | + | chr5_3:54604643-54604662 | Msa0818630:CDS | 45.0% |
GGAGGACCAAGAACTTTATG+GGG | + | chr5_3:54604691-54604710 | Msa0818630:CDS | 45.0% | |
GGATTCAAAACTAGGGGAGT+AGG | + | chr5_3:54604712-54604731 | Msa0818630:CDS | 45.0% | |
GATGACACCCTTGACTTCAT+TGG | + | chr5_3:54604775-54604794 | Msa0818630:CDS | 45.0% | |
GATCACCTCCAATGAAGTCA+AGG | - | chr5_3:54604786-54604805 | None:intergenic | 45.0% | |
!!! | GGACACATTTTTGCTGGTTC+TGG | + | chr5_3:54604877-54604896 | Msa0818630:CDS | 45.0% |
CAGACAACCGAAAAGAGTCT+AGG | - | chr5_3:54604957-54604976 | None:intergenic | 45.0% | |
AACTGAAGCTAACCTCTAGG+CGG | - | chr5_3:54605014-54605033 | None:intergenic | 45.0% | |
ACTAACCAAAAGTTGGGGGA+TGG | + | chr5_3:54605076-54605095 | Msa0818630:intron | 45.0% | |
! | CTTTGGAAGAACTTCAGTCC+AGG | - | chr5_3:54605391-54605410 | None:intergenic | 45.0% |
ATTGTTTCCCCGAGATTCGT+TGG | - | chr5_3:54605446-54605465 | None:intergenic | 45.0% | |
AGGAAGGATGAGCATGATAG+TGG | + | chr5_3:54605623-54605642 | Msa0818630:CDS | 45.0% | |
GGAAGGATGAGCATGATAGT+GGG | + | chr5_3:54605624-54605643 | Msa0818630:CDS | 45.0% | |
! | TTCAGCTTCTCAGCTCCTTT+TGG | + | chr5_3:54605662-54605681 | Msa0818630:CDS | 45.0% |
ATGAGAACTCAGCTGCCAAA+AGG | - | chr5_3:54605680-54605699 | None:intergenic | 45.0% | |
!!! | TTTTTTAAACTATAAATTTT+TGG | + | chr5_3:54600648-54600667 | Msa0818630:intron | 5.0% |
!!! | TTTTTAAACTATAAATTTTT+GGG | + | chr5_3:54600649-54600668 | Msa0818630:intron | 5.0% |
!!! | TAATCTTATTTTTTTATATT+TGG | + | chr5_3:54605158-54605177 | Msa0818630:intron | 5.0% |
TTGTTCGGAGGCTAATCGAC+GGG | - | chr5_3:54598685-54598704 | None:intergenic | 50.0% | |
CTTGTTCGGAGGCTAATCGA+CGG | - | chr5_3:54598686-54598705 | None:intergenic | 50.0% | |
AACACGTCGTGGACTCGAAT+TGG | - | chr5_3:54598711-54598730 | None:intergenic | 50.0% | |
GTCCACGACGTGTTCATTAC+CGG | + | chr5_3:54598717-54598736 | Msa0818630:CDS | 50.0% | |
TTCCGGTAATGAACACGTCG+TGG | - | chr5_3:54598722-54598741 | None:intergenic | 50.0% | |
CGAGAAAGCCACTACAATGC+AGG | + | chr5_3:54598788-54598807 | Msa0818630:CDS | 50.0% | |
GGTTAAGCTTGAAGCTGGAC+CGG | + | chr5_3:54598878-54598897 | Msa0818630:CDS | 50.0% | |
GCAGTATTCGGCAACTCTTC+CGG | - | chr5_3:54598900-54598919 | None:intergenic | 50.0% | |
GAGACGGAGAGTAAGCTTAC+TGG | + | chr5_3:54598942-54598961 | Msa0818630:CDS | 50.0% | |
ACGGAGAGTAAGCTTACTGG+TGG | + | chr5_3:54598945-54598964 | Msa0818630:CDS | 50.0% | |
TTGTCTGGGTGGTATCGTGT+CGG | + | chr5_3:54599133-54599152 | Msa0818630:intron | 50.0% | |
ACCGAACTCCATGGTACAAC+CGG | + | chr5_3:54599258-54599277 | Msa0818630:intron | 50.0% | |
ACCGGTTGTACCATGGAGTT+CGG | - | chr5_3:54599262-54599281 | None:intergenic | 50.0% | |
! | ATGTCGCTTCACGGTTCAAC+CGG | - | chr5_3:54599280-54599299 | None:intergenic | 50.0% |
! | GCGTAGAGAATGTCGCTTCA+CGG | - | chr5_3:54599289-54599308 | None:intergenic | 50.0% |
CTTGTGATCGTAGGTGTGTC+TGG | - | chr5_3:54599556-54599575 | None:intergenic | 50.0% | |
ATGAACAACCGTGCCACAAG+TGG | - | chr5_3:54600120-54600139 | None:intergenic | 50.0% | |
! | ATCGTCAAAGCACCAGGACT+TGG | + | chr5_3:54600209-54600228 | Msa0818630:CDS | 50.0% |
! | CAAGAGTGTACACCAAGTCC+TGG | - | chr5_3:54600224-54600243 | None:intergenic | 50.0% |
!! | CAGGACTTGGTGTACACTCT+TGG | + | chr5_3:54600222-54600241 | Msa0818630:CDS | 50.0% |
AGGTCTATAAGGAGGCAGCT+TGG | + | chr5_3:54600282-54600301 | Msa0818630:CDS | 50.0% | |
GGTCTATAAGGAGGCAGCTT+GGG | + | chr5_3:54600283-54600302 | Msa0818630:CDS | 50.0% | |
! | AACCGCAAGCTCTGGTGATT+CGG | - | chr5_3:54600423-54600442 | None:intergenic | 50.0% |
TACTTGTGAAGGCCTTCCCT+AGG | - | chr5_3:54600967-54600986 | None:intergenic | 50.0% | |
! | GGGTGGTTTAGTTGGGTTGT+AGG | - | chr5_3:54601231-54601250 | None:intergenic | 50.0% |
AAGGTCCCGGACACAAACAA+TGG | - | chr5_3:54602181-54602200 | None:intergenic | 50.0% | |
AACAGTGGGCATGGTGAGAA+TGG | + | chr5_3:54602331-54602350 | Msa0818630:intron | 50.0% | |
ACGTGAAGGTCCAACTTCGA+TGG | + | chr5_3:54602427-54602446 | Msa0818630:intron | 50.0% | |
GTGAAGTTAGGTGGAGGATG+TGG | + | chr5_3:54602475-54602494 | Msa0818630:intron | 50.0% | |
AAGTTAGGTGGAGGATGTGG+TGG | + | chr5_3:54602478-54602497 | Msa0818630:intron | 50.0% | |
AGTTAGGTGGAGGATGTGGT+GGG | + | chr5_3:54602479-54602498 | Msa0818630:intron | 50.0% | |
!! | GGTGGTTCTGGGTTATGATC+CGG | + | chr5_3:54602569-54602588 | Msa0818630:intron | 50.0% |
TGGGTTATGATCCGGTGTGA+TGG | + | chr5_3:54602577-54602596 | Msa0818630:intron | 50.0% | |
TCCTACGATTGCCAGGGTAT+AGG | + | chr5_3:54603156-54603175 | Msa0818630:intron | 50.0% | |
CCTACGATTGCCAGGGTATA+GGG | + | chr5_3:54603157-54603176 | Msa0818630:intron | 50.0% | |
GATTGCCAGGGTATAGGGAA+GGG | + | chr5_3:54603162-54603181 | Msa0818630:intron | 50.0% | |
ATGGAGAAGCCTTTCAGGCA+TGG | + | chr5_3:54603516-54603535 | Msa0818630:intron | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr5_3:54603669-54603688 | Msa0818630:intron | 50.0% |
! | GGTGTTGGAGGCTGCAATTA+AGG | + | chr5_3:54603744-54603763 | Msa0818630:intron | 50.0% |
TTAATTGCGGTCCGCCATTG+CGG | - | chr5_3:54603807-54603826 | None:intergenic | 50.0% | |
!!! | CCACGTTTTTCAGGCCCATT+GGG | - | chr5_3:54603870-54603889 | None:intergenic | 50.0% |
!!! | TCCACGTTTTTCAGGCCCAT+TGG | - | chr5_3:54603871-54603890 | None:intergenic | 50.0% |
CCTGAAAAACGTGGACGATG+CGG | + | chr5_3:54603876-54603895 | Msa0818630:intron | 50.0% | |
CTGAAAAACGTGGACGATGC+GGG | + | chr5_3:54603877-54603896 | Msa0818630:intron | 50.0% | |
GCAATTTAGGCAACTAGGGG+CGG | + | chr5_3:54603975-54603994 | Msa0818630:intron | 50.0% | |
! | GGTGTTGGAGGCTGCAATTA+AGG | + | chr5_3:54603744-54603763 | Msa0818630:intron | 50.0% |
GCAATTTAGGCAACTAGGGG+CGG | + | chr5_3:54603975-54603994 | Msa0818630:intron | 50.0% | |
!!! | CCACGTTTTTCAGGCCCATT+GGG | - | chr5_3:54603870-54603889 | None:intergenic | 50.0% |
!!! | TCCACGTTTTTCAGGCCCAT+TGG | - | chr5_3:54603871-54603890 | None:intergenic | 50.0% |
CCTGAAAAACGTGGACGATG+CGG | + | chr5_3:54603876-54603895 | Msa0818630:intron | 50.0% | |
CTGAAAAACGTGGACGATGC+GGG | + | chr5_3:54603877-54603896 | Msa0818630:intron | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr5_3:54603669-54603688 | Msa0818630:intron | 50.0% |
! | GGGTGGATTTAGTCCCACAT+CGG | - | chr5_3:54604316-54604335 | None:intergenic | 50.0% |
! | GGTGTTGGAGGCTGCAATTA+AGG | + | chr5_3:54603744-54603763 | Msa0818630:intron | 50.0% |
!!! | GTTCGCTTTGGTGTCCCTTT+TGG | + | chr5_3:54604532-54604551 | Msa0818630:CDS | 50.0% |
CTGAACCTTGGCATATCTGC+TGG | + | chr5_3:54604571-54604590 | Msa0818630:CDS | 50.0% | |
GAACCTTGGCATATCTGCTG+GGG | + | chr5_3:54604573-54604592 | Msa0818630:CDS | 50.0% | |
!!! | TGCTGGGGCTGTTTTTCCAT+GGG | + | chr5_3:54604588-54604607 | Msa0818630:CDS | 50.0% |
!! | CTGTTTTTCCATGGGGCCAA+GGG | + | chr5_3:54604596-54604615 | Msa0818630:CDS | 50.0% |
TTCTCTCCAGTTTGCACCCT+AGG | + | chr5_3:54604670-54604689 | Msa0818630:CDS | 50.0% | |
! | TTTTGCCTTCGCGGTTCAGT+AGG | - | chr5_3:54604739-54604758 | None:intergenic | 50.0% |
GACACCCTTGACTTCATTGG+AGG | + | chr5_3:54604778-54604797 | Msa0818630:CDS | 50.0% | |
! | GACTCTTTTCGGTTGTCTGC+TGG | + | chr5_3:54604958-54604977 | Msa0818630:CDS | 50.0% |
TTTCGGTTGTCTGCTGGATG+TGG | + | chr5_3:54604964-54604983 | Msa0818630:CDS | 50.0% | |
TCTAGGCGGAAGAGTCTAGT+AGG | - | chr5_3:54605000-54605019 | None:intergenic | 50.0% | |
TACTAGACTCTTCCGCCTAG+AGG | + | chr5_3:54604999-54605018 | Msa0818630:CDS | 50.0% | |
AACCAAAAGTTGGGGGATGG+TGG | + | chr5_3:54605079-54605098 | Msa0818630:intron | 50.0% | |
! | TTCCACCATCCCCCAACTTT+TGG | - | chr5_3:54605084-54605103 | None:intergenic | 50.0% |
TAATGCTGGTGAGAGGACAG+GGG | - | chr5_3:54605569-54605588 | None:intergenic | 50.0% | |
GTAATGCTGGTGAGAGGACA+GGG | - | chr5_3:54605570-54605589 | None:intergenic | 50.0% | |
AGTAATGCTGGTGAGAGGAC+AGG | - | chr5_3:54605571-54605590 | None:intergenic | 50.0% | |
!! | GAGCATGATAGTGGGAAGAC+TGG | + | chr5_3:54605632-54605651 | Msa0818630:CDS | 50.0% |
CTTCTCAGATTGCTGCTGCG+AGG | + | chr5_3:54598823-54598842 | Msa0818630:CDS | 55.0% | |
TTGCTGCTGCGAGGCTTCAA+CGG | + | chr5_3:54598832-54598851 | Msa0818630:CDS | 55.0% | |
!! | GTGTCGGTGTCAGATAGTGC+AGG | + | chr5_3:54599149-54599168 | Msa0818630:intron | 55.0% |
CGGTTCAACCGGTTGTACCA+TGG | - | chr5_3:54599269-54599288 | None:intergenic | 55.0% | |
AAGCGACAGAGGCGAGCTTT+GGG | + | chr5_3:54600061-54600080 | Msa0818630:CDS | 55.0% | |
ATAAGGAGGCAGCTTGGGCA+TGG | + | chr5_3:54600288-54600307 | Msa0818630:CDS | 55.0% | |
TAAGGAGGCAGCTTGGGCAT+GGG | + | chr5_3:54600289-54600308 | Msa0818630:CDS | 55.0% | |
CACCGAATCACCAGAGCTTG+CGG | + | chr5_3:54600418-54600437 | Msa0818630:CDS | 55.0% | |
GGAAGGCCTTCACAAGTACG+AGG | + | chr5_3:54600969-54600988 | Msa0818630:intron | 55.0% | |
CACTTCGTCGCCATCGAAGT+TGG | - | chr5_3:54602440-54602459 | None:intergenic | 55.0% | |
CAACTTCGATGGCGACGAAG+TGG | + | chr5_3:54602438-54602457 | Msa0818630:intron | 55.0% | |
TAACTTCACCCGCACCCAGA+CGG | - | chr5_3:54602464-54602483 | None:intergenic | 55.0% | |
! | GATGTGGTGGGATTGGAGGA+GGG | + | chr5_3:54602491-54602510 | Msa0818630:intron | 55.0% |
! | GGTGATGACGAGGATGATGG+TGG | + | chr5_3:54602545-54602564 | Msa0818630:intron | 55.0% |
!! | GATGACGAGGATGATGGTGG+CGG | + | chr5_3:54602548-54602567 | Msa0818630:intron | 55.0% |
!! | ATGATGGTGGCGGTGGTTCT+GGG | + | chr5_3:54602558-54602577 | Msa0818630:intron | 55.0% |
CCCTATACCCTGGCAATCGT+AGG | - | chr5_3:54603160-54603179 | None:intergenic | 55.0% | |
CGATTGCCAGGGTATAGGGA+AGG | + | chr5_3:54603161-54603180 | Msa0818630:intron | 55.0% | |
TCCAACCCTTCCCTATACCC+TGG | - | chr5_3:54603170-54603189 | None:intergenic | 55.0% | |
TGGGCATGGAGAAGCCTTTC+AGG | + | chr5_3:54603511-54603530 | Msa0818630:intron | 55.0% | |
GCACTCCTCACCTTACAAGC+CGG | - | chr5_3:54603677-54603696 | None:intergenic | 55.0% | |
GGATTTAGTCCCACGTCGGA+AGG | - | chr5_3:54603699-54603718 | None:intergenic | 55.0% | |
! | GGGTGGATTTAGTCCCACGT+CGG | - | chr5_3:54603703-54603722 | None:intergenic | 55.0% |
!! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr5_3:54603720-54603739 | None:intergenic | 55.0% |
!! | GCAATGGCGGACCGCAATTA+AGG | + | chr5_3:54603806-54603825 | Msa0818630:intron | 55.0% |
!! | ATGGCGGACCGCAATTAAGG+CGG | + | chr5_3:54603809-54603828 | Msa0818630:intron | 55.0% |
!!! | TTTTTCAGGCCCATTGGGCC+GGG | - | chr5_3:54603865-54603884 | None:intergenic | 55.0% |
!!! | GTTTTTCAGGCCCATTGGGC+CGG | - | chr5_3:54603866-54603885 | None:intergenic | 55.0% |
CCCAATGGGCCTGAAAAACG+TGG | + | chr5_3:54603867-54603886 | Msa0818630:intron | 55.0% | |
! | CCGCATCGTCCACGTTTTTC+AGG | - | chr5_3:54603879-54603898 | None:intergenic | 55.0% |
ATGCGGGAAGCCCAACGATA+AGG | + | chr5_3:54603893-54603912 | Msa0818630:intron | 55.0% | |
!! | GCAATGGCGGACCGCAATTA+AGG | + | chr5_3:54603806-54603825 | Msa0818630:intron | 55.0% |
!!! | TTTTTCAGGCCCATTGGGCC+GGG | - | chr5_3:54603865-54603884 | None:intergenic | 55.0% |
!!! | GTTTTTCAGGCCCATTGGGC+CGG | - | chr5_3:54603866-54603885 | None:intergenic | 55.0% |
CCCAATGGGCCTGAAAAACG+TGG | + | chr5_3:54603867-54603886 | Msa0818630:intron | 55.0% | |
! | CCGCATCGTCCACGTTTTTC+AGG | - | chr5_3:54603879-54603898 | None:intergenic | 55.0% |
GCACTCCTCACCTTACAAGC+CGG | - | chr5_3:54603677-54603696 | None:intergenic | 55.0% | |
!! | TTGTGTTGGCTTTGACGGGG+TGG | - | chr5_3:54604333-54604352 | None:intergenic | 55.0% |
GCAATTTAGGCGACTAGGGG+CGG | + | chr5_3:54604393-54604412 | Msa0818630:intron | 55.0% | |
!!! | CTGCTGGGGCTGTTTTTCCA+TGG | + | chr5_3:54604587-54604606 | Msa0818630:CDS | 55.0% |
!!! | GCTGGGGCTGTTTTTCCATG+GGG | + | chr5_3:54604589-54604608 | Msa0818630:CDS | 55.0% |
!!! | GCTGTTTTTCCATGGGGCCA+AGG | + | chr5_3:54604595-54604614 | Msa0818630:CDS | 55.0% |
TTCCATGGGGCCAAGGGTTT+AGG | + | chr5_3:54604602-54604621 | Msa0818630:CDS | 55.0% | |
TCTCCAGTTTGCACCCTAGG+AGG | + | chr5_3:54604673-54604692 | Msa0818630:CDS | 55.0% | |
TAGGTCCTACTGAACCGCGA+AGG | + | chr5_3:54604731-54604750 | Msa0818630:CDS | 55.0% | |
TGCGAGGCTTCAACGGCTTG+AGG | + | chr5_3:54598839-54598858 | Msa0818630:CDS | 60.0% | |
CAAGCGACAGAGGCGAGCTT+TGG | + | chr5_3:54600060-54600079 | Msa0818630:CDS | 60.0% | |
AGCGACAGAGGCGAGCTTTG+GGG | + | chr5_3:54600062-54600081 | Msa0818630:CDS | 60.0% | |
CGTGGCCAAAGTGGCTACAC+AGG | - | chr5_3:54601602-54601621 | None:intergenic | 60.0% | |
GTCTGGGTGCGGGTGAAGTT+AGG | + | chr5_3:54602463-54602482 | Msa0818630:intron | 60.0% | |
TGGGTGCGGGTGAAGTTAGG+TGG | + | chr5_3:54602466-54602485 | Msa0818630:intron | 60.0% | |
GTGCGGGTGAAGTTAGGTGG+AGG | + | chr5_3:54602469-54602488 | Msa0818630:intron | 60.0% | |
! | GGTGGAGGATGTGGTGGGAT+TGG | + | chr5_3:54602484-54602503 | Msa0818630:intron | 60.0% |
! | GGAGGATGTGGTGGGATTGG+AGG | + | chr5_3:54602487-54602506 | Msa0818630:intron | 60.0% |
! | GGATGTGGTGGGATTGGAGG+AGG | + | chr5_3:54602490-54602509 | Msa0818630:intron | 60.0% |
! | TGGTTGTGGCGGTGATGACG+AGG | + | chr5_3:54602535-54602554 | Msa0818630:intron | 60.0% |
! | GGCGGTGATGACGAGGATGA+TGG | + | chr5_3:54602542-54602561 | Msa0818630:intron | 60.0% |
!! | GATGATGGTGGCGGTGGTTC+TGG | + | chr5_3:54602557-54602576 | Msa0818630:intron | 60.0% |
CCTCAACGGCACCATCACAC+CGG | - | chr5_3:54602591-54602610 | None:intergenic | 60.0% | |
!! | CGGTGTGATGGTGCCGTTGA+GGG | + | chr5_3:54602589-54602608 | Msa0818630:intron | 60.0% |
!! | TGTGATGGTGCCGTTGAGGG+TGG | + | chr5_3:54602592-54602611 | Msa0818630:intron | 60.0% |
!! | GTGGTGGAATCTGGTGGTGG+TGG | + | chr5_3:54602617-54602636 | Msa0818630:intron | 60.0% |
!! | TGGAATCTGGTGGTGGTGGC+TGG | + | chr5_3:54602621-54602640 | Msa0818630:intron | 60.0% |
! | GCAGTGGGTGGTGGTGTTTG+AGG | + | chr5_3:54602643-54602662 | Msa0818630:intron | 60.0% |
GCCAGGGTATAGGGAAGGGT+TGG | + | chr5_3:54603166-54603185 | Msa0818630:intron | 60.0% | |
!! | TGAGGAGTGCCTTCCGACGT+GGG | + | chr5_3:54603687-54603706 | Msa0818630:intron | 60.0% |
AAACTAGGGGCGGACCGCAA+TGG | + | chr5_3:54603790-54603809 | Msa0818630:intron | 60.0% | |
! | GAAGCGTGAGGGGGGTGTAT+TGG | - | chr5_3:54603840-54603859 | None:intergenic | 60.0% |
!! | CAACTAGGGGCGGACTGCAA+TGG | + | chr5_3:54603985-54604004 | Msa0818630:intron | 60.0% |
! | GAAGCGTGAGGGGGGTGTAT+TGG | - | chr5_3:54603840-54603859 | None:intergenic | 60.0% |
CAGCCCCAGCAGATATGCCA+AGG | - | chr5_3:54604579-54604598 | None:intergenic | 60.0% | |
GTCCTAAACCCTTGGCCCCA+TGG | - | chr5_3:54604607-54604626 | None:intergenic | 60.0% | |
AACCTTTCGGGGAGGGGAGA+TGG | - | chr5_3:54604634-54604653 | None:intergenic | 60.0% | |
GGTCCTCCTAGGGTGCAAAC+TGG | - | chr5_3:54604679-54604698 | None:intergenic | 60.0% | |
TGGCGGCAAGCAAGCGACAG+AGG | + | chr5_3:54600050-54600069 | Msa0818630:CDS | 65.0% | |
GGCGCAGAAACCGCAAGCTC+TGG | - | chr5_3:54600431-54600450 | None:intergenic | 65.0% | |
GAGCTTGCGGTTTCTGCGCC+AGG | + | chr5_3:54600431-54600450 | Msa0818630:CDS | 65.0% | |
ATGGCGACGAAGTGGCCGTC+TGG | + | chr5_3:54602446-54602465 | Msa0818630:intron | 65.0% | |
TGGCGACGAAGTGGCCGTCT+GGG | + | chr5_3:54602447-54602466 | Msa0818630:intron | 65.0% | |
ACGAAGTGGCCGTCTGGGTG+CGG | + | chr5_3:54602452-54602471 | Msa0818630:intron | 65.0% | |
! | GGGATTGGAGGAGGGTGCAG+CGG | + | chr5_3:54602499-54602518 | Msa0818630:intron | 65.0% |
! | ATTGGAGGAGGGTGCAGCGG+TGG | + | chr5_3:54602502-54602521 | Msa0818630:intron | 65.0% |
! | TTGGAGGAGGGTGCAGCGGT+GGG | + | chr5_3:54602503-54602522 | Msa0818630:intron | 65.0% |
!! | GACGAGGATGATGGTGGCGG+TGG | + | chr5_3:54602551-54602570 | Msa0818630:intron | 65.0% |
!! | CCGGTGTGATGGTGCCGTTG+AGG | + | chr5_3:54602588-54602607 | Msa0818630:intron | 65.0% |
!! | GATGGTGCCGTTGAGGGTGG+CGG | + | chr5_3:54602595-54602614 | Msa0818630:intron | 65.0% |
TCCACCACCGCCACCCTCAA+CGG | - | chr5_3:54602605-54602624 | None:intergenic | 65.0% | |
!! | AGGGTGGCGGTGGTGGAATC+TGG | + | chr5_3:54602608-54602627 | Msa0818630:intron | 65.0% |
!! | GTGGCGGTGGTGGAATCTGG+TGG | + | chr5_3:54602611-54602630 | Msa0818630:intron | 65.0% |
!! | GCGGTGGTGGAATCTGGTGG+TGG | + | chr5_3:54602614-54602633 | Msa0818630:intron | 65.0% |
!! | TGGTGGTGGTGGCTGGCAGT+GGG | + | chr5_3:54602628-54602647 | Msa0818630:intron | 65.0% |
!! | GTGAGGAGTGCCTTCCGACG+TGG | + | chr5_3:54603686-54603705 | Msa0818630:intron | 65.0% |
ACGCTTCAGCCCGGCCCAAT+GGG | + | chr5_3:54603853-54603872 | Msa0818630:intron | 65.0% | |
!! | CTAGGGGCGGACTGCAATGG+CGG | + | chr5_3:54603988-54604007 | Msa0818630:intron | 65.0% |
CAACTAGGGGCGGACCGCAA+TGG | + | chr5_3:54604093-54604112 | Msa0818630:intron | 65.0% | |
ACGCTTCAGCCCGGCCCAAT+GGG | + | chr5_3:54603853-54603872 | Msa0818630:intron | 65.0% | |
CTAGGGGCGGACCCCAATCA+AGG | + | chr5_3:54604406-54604425 | Msa0818630:intron | 65.0% | |
AGCCATCTCCCCTCCCCGAA+AGG | + | chr5_3:54604629-54604648 | Msa0818630:CDS | 65.0% | |
CTGGTGAGAGGACAGGGGAG+GGG | - | chr5_3:54605564-54605583 | None:intergenic | 65.0% | |
GCTGGTGAGAGGACAGGGGA+GGG | - | chr5_3:54605565-54605584 | None:intergenic | 65.0% | |
TGCTGGTGAGAGGACAGGGG+AGG | - | chr5_3:54605566-54605585 | None:intergenic | 65.0% | |
CGAAGTGGCCGTCTGGGTGC+GGG | + | chr5_3:54602453-54602472 | Msa0818630:intron | 70.0% | |
! | AGGAGGGTGCAGCGGTGGGA+GGG | + | chr5_3:54602507-54602526 | Msa0818630:intron | 70.0% |
!! | CTGGTGGTGGTGGCTGGCAG+TGG | + | chr5_3:54602627-54602646 | Msa0818630:intron | 70.0% |
!! | TGGTGGTGGCTGGCAGTGGG+TGG | + | chr5_3:54602631-54602650 | Msa0818630:intron | 70.0% |
TGGTGGCTGGCAGTGGGTGG+TGG | + | chr5_3:54602634-54602653 | Msa0818630:intron | 70.0% | |
CTAGGGGCGGACCGCAATGG+CGG | + | chr5_3:54603793-54603812 | Msa0818630:intron | 70.0% | |
ACCCCCCTCACGCTTCAGCC+CGG | + | chr5_3:54603844-54603863 | Msa0818630:intron | 70.0% | |
TGGGCCGGGCTGAAGCGTGA+GGG | - | chr5_3:54603851-54603870 | None:intergenic | 70.0% | |
TTGGGCCGGGCTGAAGCGTG+AGG | - | chr5_3:54603852-54603871 | None:intergenic | 70.0% | |
CACGCTTCAGCCCGGCCCAA+TGG | + | chr5_3:54603852-54603871 | Msa0818630:intron | 70.0% | |
CTAGGGGCGGACCGCAATGG+CGG | + | chr5_3:54603793-54603812 | Msa0818630:intron | 70.0% | |
ACCCCCCTCACGCTTCAGCC+CGG | + | chr5_3:54603844-54603863 | Msa0818630:intron | 70.0% | |
TGGGCCGGGCTGAAGCGTGA+GGG | - | chr5_3:54603851-54603870 | None:intergenic | 70.0% | |
TTGGGCCGGGCTGAAGCGTG+AGG | - | chr5_3:54603852-54603871 | None:intergenic | 70.0% | |
CACGCTTCAGCCCGGCCCAA+TGG | + | chr5_3:54603852-54603871 | Msa0818630:intron | 70.0% | |
GGGGCGGACCCCAATCAAGG+CGG | + | chr5_3:54604409-54604428 | Msa0818630:intron | 70.0% | |
! | GAGGAGGGTGCAGCGGTGGG+AGG | + | chr5_3:54602506-54602525 | Msa0818630:intron | 75.0% |
! | GGAGGGTGCAGCGGTGGGAG+GGG | + | chr5_3:54602508-54602527 | Msa0818630:intron | 75.0% |
! | GAGGGTGCAGCGGTGGGAGG+GGG | + | chr5_3:54602509-54602528 | Msa0818630:intron | 75.0% |
GTGGGAGGGGGCGGTGGTTG+TGG | + | chr5_3:54602521-54602540 | Msa0818630:intron | 75.0% | |
GGAGGGGGCGGTGGTTGTGG+CGG | + | chr5_3:54602524-54602543 | Msa0818630:intron | 75.0% | |
!! | GGTGCCGTTGAGGGTGGCGG+TGG | + | chr5_3:54602598-54602617 | Msa0818630:intron | 75.0% |
! | GCCGTTGAGGGTGGCGGTGG+TGG | + | chr5_3:54602601-54602620 | Msa0818630:intron | 75.0% |
GCCGGGCTGAAGCGTGAGGG+GGG | - | chr5_3:54603848-54603867 | None:intergenic | 75.0% | |
GGCCGGGCTGAAGCGTGAGG+GGG | - | chr5_3:54603849-54603868 | None:intergenic | 75.0% | |
GGGCCGGGCTGAAGCGTGAG+GGG | - | chr5_3:54603850-54603869 | None:intergenic | 75.0% | |
GCCGGGCTGAAGCGTGAGGG+GGG | - | chr5_3:54603848-54603867 | None:intergenic | 75.0% | |
GGCCGGGCTGAAGCGTGAGG+GGG | - | chr5_3:54603849-54603868 | None:intergenic | 75.0% | |
GGGCCGGGCTGAAGCGTGAG+GGG | - | chr5_3:54603850-54603869 | None:intergenic | 75.0% | |
! | GGTGCAGCGGTGGGAGGGGG+CGG | + | chr5_3:54602512-54602531 | Msa0818630:intron | 80.0% |
! | GCAGCGGTGGGAGGGGGCGG+TGG | + | chr5_3:54602515-54602534 | Msa0818630:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 54598507 | 54605908 | 54598507 | ID=Msa0818630;Name=Msa0818630 |
chr5_3 | mRNA | 54598507 | 54605908 | 54598507 | ID=Msa0818630-mRNA-1;Parent=Msa0818630;Name=Msa0818630-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.66|0.75|1|1|1|4|217|513 |
chr5_3 | exon | 54598507 | 54598974 | 54598507 | ID=Msa0818630-mRNA-1:exon:16554;Parent=Msa0818630-mRNA-1 |
chr5_3 | exon | 54599967 | 54600452 | 54599967 | ID=Msa0818630-mRNA-1:exon:16555;Parent=Msa0818630-mRNA-1 |
chr5_3 | exon | 54604523 | 54605020 | 54604523 | ID=Msa0818630-mRNA-1:exon:16556;Parent=Msa0818630-mRNA-1 |
chr5_3 | exon | 54605602 | 54605908 | 54605602 | ID=Msa0818630-mRNA-1:exon:16557;Parent=Msa0818630-mRNA-1 |
chr5_3 | CDS | 54598507 | 54598974 | 54598507 | ID=Msa0818630-mRNA-1:cds;Parent=Msa0818630-mRNA-1 |
chr5_3 | CDS | 54599967 | 54600452 | 54599967 | ID=Msa0818630-mRNA-1:cds;Parent=Msa0818630-mRNA-1 |
chr5_3 | CDS | 54604523 | 54605020 | 54604523 | ID=Msa0818630-mRNA-1:cds;Parent=Msa0818630-mRNA-1 |
chr5_3 | CDS | 54605602 | 54605691 | 54605602 | ID=Msa0818630-mRNA-1:cds;Parent=Msa0818630-mRNA-1 |
chr5_3 | three_prime_UTR | 54605692 | 54605908 | 54605692 | ID=Msa0818630-mRNA-1:three_prime_utr;Parent=Msa0818630-mRNA-1 |
Gene Sequence |
Protein sequence |