AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0219660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0219660 MtrunA17_Chr2g0322731 99.050 737 7 0 1 737 34 770 0.0 1516
Msa0219660 MtrunA17_Chr4g0024351 84.450 746 95 10 1 737 1 734 0.0 1248
Msa0219660 MtrunA17_Chr8g0350321 56.428 739 287 11 26 735 77 809 0.0 798
Msa0219660 MtrunA17_Chr7g0246631 56.738 705 261 12 61 735 87 777 0.0 785
Msa0219660 MtrunA17_Chr1g0203671 52.510 737 305 10 34 732 60 789 0.0 753
Msa0219660 MtrunA17_Chr6g0481041 49.505 707 314 14 63 733 25 724 0.0 682
Msa0219660 MtrunA17_Chr5g0394111 50.214 701 270 12 46 732 11 646 0.0 645
Msa0219660 MtrunA17_Chr5g0410711 44.762 735 354 15 37 732 57 778 0.0 636
Msa0219660 MtrunA17_Chr2g0331581 45.508 679 327 9 71 735 143 792 0.0 619
Msa0219660 MtrunA17_Chr6g0472471 43.548 744 362 13 34 732 35 765 0.0 604
Msa0219660 MtrunA17_Chr7g0224451 43.277 476 205 11 67 530 16 438 1.07e-122 374
Msa0219660 MtrunA17_Chr2g0292731 36.926 501 296 9 250 736 58 552 4.14e-105 332
Msa0219660 MtrunA17_Chr2g0292741 36.863 510 308 9 235 736 36 539 2.09e-102 325
Msa0219660 MtrunA17_Chr7g0224491 47.962 319 128 10 428 733 1 294 2.40e-83 266
Msa0219660 MtrunA17_Chr7g0224481 41.622 370 159 9 67 425 16 339 2.80e-82 265
Msa0219660 MtrunA17_Chr2g0292761 31.261 595 351 15 146 734 1 543 8.05e-76 254
Msa0219660 MtrunA17_Chr2g0319671 41.860 215 114 2 262 476 65 268 7.27e-50 177
Msa0219660 MtrunA17_Chr1g0205981 44.388 196 97 3 122 313 1 188 8.00e-42 151
Msa0219660 MtrunA17_Chr5g0419821 48.413 126 64 1 63 187 29 154 4.37e-36 134
Msa0219660 MtrunA17_Chr2g0319701 39.301 229 121 7 514 733 5 224 3.61e-35 134
Msa0219660 MtrunA17_Chr2g0319681 36.638 232 133 5 510 733 1 226 1.00e-34 132
Msa0219660 MtrunA17_Chr2g0319691 52.101 119 57 0 368 486 1 119 1.02e-34 129
Msa0219660 MtrunA17_Chr3g0140351 22.427 758 390 26 70 733 20 673 1.88e-26 115
Msa0219660 MtrunA17_Chr7g0224461 48.760 121 43 5 624 732 1 114 1.53e-22 93.6
Msa0219660 MtrunA17_Chr7g0224431 35.484 155 60 3 283 436 6 121 1.67e-16 76.3
Msa0219660 MtrunA17_Chr2g0304191 32.824 131 86 2 264 392 1 131 2.75e-16 76.3
Msa0219660 MtrunA17_Chr4g0028991 23.046 499 278 18 312 733 212 681 9.54e-15 78.6
Msa0219660 MtrunA17_Chr4g0028991 31.405 121 69 3 50 159 8 125 4.75e-13 72.8
Msa0219660 MtrunA17_Chr1g0179581 36.047 86 52 1 65 150 26 108 1.03e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0219660 AT1G05230.8 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.4 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.9 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.10 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.7 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.11 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.2 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.6 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.5 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.1 77.328 741 144 7 1 737 1 721 0.0 1145
Msa0219660 AT1G05230.3 77.058 741 144 8 1 737 1 719 0.0 1137
Msa0219660 AT4G04890.2 73.803 752 168 10 1 736 1 739 0.0 1122
Msa0219660 AT4G04890.1 73.803 752 168 10 1 736 1 739 0.0 1122
Msa0219660 AT4G21750.2 72.208 770 173 8 1 737 1 762 0.0 1111
Msa0219660 AT4G21750.1 72.208 770 173 8 1 737 1 762 0.0 1111
Msa0219660 AT4G21750.3 72.208 770 173 8 1 737 1 762 0.0 1111
Msa0219660 AT4G21750.4 72.208 770 173 8 1 737 1 762 0.0 1111
Msa0219660 AT1G05230.12 75.606 619 131 6 1 615 1 603 0.0 945
Msa0219660 AT2G32370.1 54.066 701 287 12 42 729 39 717 0.0 746
Msa0219660 AT3G61150.1 51.197 752 310 9 24 732 66 803 0.0 741
Msa0219660 AT4G00730.1 53.984 728 297 13 26 735 94 801 0.0 735
Msa0219660 AT1G73360.1 47.863 702 328 11 63 737 28 718 0.0 643
Msa0219660 AT1G17920.2 47.286 700 333 12 48 733 5 682 0.0 619
Msa0219660 AT1G17920.1 47.286 700 333 12 48 733 5 682 0.0 619
Msa0219660 AT5G52170.2 45.492 732 331 14 16 732 5 683 0.0 609
Msa0219660 AT5G46880.3 45.467 717 343 17 60 737 104 811 0.0 607
Msa0219660 AT5G46880.1 45.467 717 343 17 60 737 104 811 0.0 607
Msa0219660 AT5G46880.2 45.467 717 343 17 60 737 104 811 0.0 607
Msa0219660 AT5G52170.3 45.628 732 325 16 16 732 5 678 0.0 604
Msa0219660 AT5G52170.1 45.628 732 325 16 16 732 5 678 0.0 604
Msa0219660 AT1G79840.3 43.022 695 341 14 55 735 34 687 0.0 555
Msa0219660 AT1G79840.1 43.022 695 341 14 55 735 92 745 0.0 555
Msa0219660 AT1G79840.6 43.022 695 341 14 55 735 34 687 0.0 555
Msa0219660 AT1G79840.2 43.022 695 341 14 55 735 121 774 0.0 555
Msa0219660 AT4G17710.1 42.258 691 328 18 57 736 77 707 8.61e-171 508
Msa0219660 AT1G79840.4 43.386 567 273 12 55 611 92 620 2.81e-155 465
Msa0219660 AT3G03260.1 38.787 709 392 18 48 733 6 695 1.13e-150 456
Msa0219660 AT4G00730.2 49.375 480 211 9 26 490 94 556 1.65e-146 440
Msa0219660 AT4G25530.1 37.335 683 389 10 58 732 31 682 6.69e-146 442
Msa0219660 AT5G17320.1 34.747 731 421 19 45 735 4 718 8.45e-128 397
Msa0219660 AT1G34650.1 34.282 703 404 15 74 735 23 708 7.79e-117 368
Msa0219660 AT3G03260.2 38.532 545 314 14 48 583 6 538 1.65e-111 348
Msa0219660 AT1G79840.5 42.825 446 207 12 55 490 92 499 1.30e-109 343
Msa0219660 AT5G07260.1 26.182 550 326 17 134 672 11 491 4.23e-43 164
Msa0219660 AT5G07260.2 26.047 549 323 17 134 672 11 486 9.75e-43 163
Msa0219660 AT1G52150.3 21.925 748 408 29 70 733 17 672 9.69e-22 101
Msa0219660 AT1G52150.1 21.925 748 408 29 70 733 17 672 1.48e-21 100
Msa0219660 AT1G52150.2 21.896 749 408 29 70 733 17 673 1.66e-21 100
Msa0219660 AT1G30490.1 23.031 508 291 19 298 733 199 678 2.46e-15 80.9
Msa0219660 AT4G26920.1 21.875 480 256 16 264 727 72 448 2.96e-14 76.3
Msa0219660 AT5G60690.1 25.000 304 192 10 298 584 190 474 2.87e-11 67.8
Msa0219660 AT5G60690.1 27.273 187 92 6 46 201 11 184 4.56e-11 67.0

Find 236 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATCTGAAAGCCATTTA+AGG 0.155720 2_1:-67396929 Msa0219660:five_prime_UTR
TTTCTTACGCTTCCATTTCT+TGG 0.160632 2_1:+67395959 None:intergenic
AATTTATTTCCTAGGTTATA+TGG 0.173165 2_1:-67393837 Msa0219660:intron
AACAATAACGTTGGTGTCTT+TGG 0.194570 2_1:-67396777 Msa0219660:five_prime_UTR
CACTTAAAACCAGCTGGTTT+TGG 0.238060 2_1:+67394563 None:intergenic
TAGCAATATGTGCCATTTCT+TGG 0.247675 2_1:+67392514 None:intergenic
AAAGGTAGTAGATTGTTTAA+AGG 0.257548 2_1:+67397674 None:intergenic
ATATTCCTCTTCATTGAGTA+TGG 0.259965 2_1:+67394613 None:intergenic
GACTGTTGCATTTCAAATAT+TGG 0.260496 2_1:-67391896 Msa0219660:CDS
GGCAGTAGTGGATGTTTCTT+TGG 0.266653 2_1:-67394043 Msa0219660:CDS
AAGGGAAAAGCATTGCATTT+TGG 0.268583 2_1:-67391626 Msa0219660:three_prime_UTR
AAGGAACTAAGCAGAGAGTT+AGG 0.279953 2_1:-67395762 Msa0219660:CDS
TCCTTCCTTTGCTTGTCATC+AGG 0.284201 2_1:+67395780 None:intergenic
AATTCATCTTCACGGATTCT+TGG 0.284298 2_1:+67396099 None:intergenic
CACACGTGGACAACACTTTC+AGG 0.288181 2_1:-67393450 Msa0219660:CDS
TCTTTCACATTGTCGATCTA+AGG 0.291948 2_1:+67393717 None:intergenic
TACAAGCATCTTGTTAGTTC+TGG 0.292041 2_1:-67393772 Msa0219660:CDS
GGCTTATATTCAAGACTATA+TGG 0.292382 2_1:-67391376 Msa0219660:three_prime_UTR
AAGGTAGTAGATTGTTTAAA+GGG 0.305251 2_1:+67397675 None:intergenic
ACAATGCCAGCTGGTCTTCC+TGG 0.308126 2_1:+67393378 None:intergenic
AGCCATTACAAGTGAAGTTT+TGG 0.309939 2_1:-67395734 Msa0219660:CDS
GAATGTATACCTCTTCTCTT+AGG 0.311141 2_1:+67395412 None:intergenic
GTTATGGAAAGTTGGGTATA+TGG 0.311170 2_1:+67397597 None:intergenic
GTTGCATTTACTATTATCTA+AGG 0.315748 2_1:+67391473 None:intergenic
AATCAAGAAGCTGCTAATTC+TGG 0.319183 2_1:-67396042 Msa0219660:CDS
GAACTCGGCATTGGTGGTTT+CGG 0.320296 2_1:-67394815 Msa0219660:CDS
TTGTACTGTTGAGAGGATTA+AGG 0.330586 2_1:-67391809 Msa0219660:CDS
AGGATTAAGGCTTCTTTGTC+TGG 0.337763 2_1:-67391796 Msa0219660:CDS
AATGGAGGTGTTGGTGAAAC+TGG 0.344059 2_1:-67391940 Msa0219660:CDS
TGTCCAGCTTCCATTAGATT+TGG 0.355568 2_1:+67396186 None:intergenic
TTTGGTGTGGTTGTCCCATC+TGG 0.359343 2_1:+67391961 None:intergenic
CGTTACATTAGATGACTTGA+TGG 0.359804 2_1:+67391760 None:intergenic
GTAATATCAACATGTTGCTT+TGG 0.360562 2_1:+67392115 None:intergenic
TTCTCTAAACCTCATGTTAT+CGG 0.361729 2_1:+67395530 None:intergenic
TTCGGAGGACAACCAGGAAT+TGG 0.362033 2_1:-67394797 Msa0219660:CDS
GATTGAAAACAATAAGCATT+TGG 0.362525 2_1:-67396239 Msa0219660:five_prime_UTR
GACTGAGAGGATTAAGGTTC+GGG 0.364771 2_1:-67391505 Msa0219660:three_prime_UTR
TATAGATATATTGTCTTAGA+AGG 0.366422 2_1:+67391322 None:intergenic
CCTTCCTTTGCTTGTCATCA+GGG 0.367415 2_1:+67395781 None:intergenic
GTTAGTTCTGGACATGCATT+TGG 0.367964 2_1:-67393760 Msa0219660:CDS
ATTGCTAATGGAAGAGATAC+TGG 0.369741 2_1:-67392498 Msa0219660:CDS
GGAAGAAGTGCTACATAATC+TGG 0.371226 2_1:+67392003 None:intergenic
GTGCTATCAACTGGGGTGGC+AGG 0.373210 2_1:-67394291 Msa0219660:CDS
TTCGACAGTGCTACAAAATC+TGG 0.373686 2_1:-67396075 Msa0219660:CDS
TTGAGGAAGTTATGGAAAGT+TGG 0.374900 2_1:+67397589 None:intergenic
TATGTAGCACTTCTTCCATC+TGG 0.375152 2_1:-67391997 Msa0219660:CDS
GGCAAAACTTTCTCTTGGTT+CGG 0.376070 2_1:-67391857 Msa0219660:CDS
CTGAAATTGAGTAGACAAAA+TGG 0.376478 2_1:+67391116 None:intergenic
CACTGGCTTTCCTACGTACT+TGG 0.377299 2_1:+67394886 None:intergenic
ACAAAATAACTTTCTCTAGT+TGG 0.380588 2_1:+67394099 None:intergenic
ACTGAGGACTGAGAGGATTA+AGG 0.383946 2_1:-67391511 Msa0219660:three_prime_UTR
ACACTGGAAGTGCTATCAAC+TGG 0.386707 2_1:-67394300 Msa0219660:CDS
TACATATCTCCTCCAATTCC+TGG 0.387106 2_1:+67394785 None:intergenic
ATTTATTTCCTAGGTTATAT+GGG 0.387488 2_1:-67393836 Msa0219660:intron
GCAGTTGGTCCACCACAATT+AGG 0.387941 2_1:+67395486 None:intergenic
CTGGGTCATCTACACTCTTA+CGG 0.388294 2_1:+67393397 None:intergenic
GCAATGAATGTGGTTCTAAA+TGG 0.388547 2_1:-67392033 Msa0219660:CDS
CTTGATCTGGCAGAAGGACT+AGG 0.389877 2_1:+67394009 None:intergenic
TGAGGAAGTTATGGAAAGTT+GGG 0.392762 2_1:+67397590 None:intergenic
GAAATGGCACATATTGCTAA+TGG 0.396088 2_1:-67392510 Msa0219660:CDS
ACATACTCTTTCTCCCATCT+TGG 0.396801 2_1:+67393532 None:intergenic
ACTCATTGGAATGGCACAAA+TGG 0.397042 2_1:-67394672 Msa0219660:CDS
GATTCTTCTGTCAGCTTTAG+CGG 0.401217 2_1:+67396964 None:intergenic
AAAGCACAAATGACAATAGA+AGG 0.404339 2_1:+67391233 None:intergenic
ATTTCAAATATTGGTTGATT+CGG 0.406456 2_1:-67391887 Msa0219660:CDS
CTTTGGTTGCCTACACTTGA+AGG 0.408059 2_1:-67394641 Msa0219660:CDS
CTTTGCTTGTCATCAGGGTG+TGG 0.418881 2_1:+67395786 None:intergenic
TGAGAGGACAAAGGAATTGA+AGG 0.418990 2_1:+67397737 None:intergenic
ACAGCTAGCTCAATTATCAT+TGG 0.419378 2_1:+67394710 None:intergenic
TGGGTCATCTACACTCTTAC+GGG 0.423400 2_1:+67393398 None:intergenic
AGAAGGCCTTCTTCTTGATC+TGG 0.423470 2_1:+67393996 None:intergenic
CAGCTTCCATTAGATTTGGC+TGG 0.429412 2_1:+67396190 None:intergenic
AATGTTCCAGCCAAATCTAA+TGG 0.438842 2_1:-67396196 Msa0219660:CDS
CCAACGGCAAAACTTTCTCT+TGG 0.441531 2_1:-67391862 Msa0219660:CDS
GCACAGGAGCTGATGATGTA+AGG 0.441905 2_1:-67393428 Msa0219660:CDS
AGCAACATGCTGATGGAACT+TGG 0.445791 2_1:-67394065 Msa0219660:CDS
CCTCTAGAACTCGGCATTGG+TGG 0.447065 2_1:-67394821 Msa0219660:CDS
TTCTCTTGGTTCGGTTGCTA+CGG 0.447827 2_1:-67391848 Msa0219660:CDS
GTTTCACCAACACCTCCATT+TGG 0.448084 2_1:+67391943 None:intergenic
TGAGCTAGCTGTTGCTGCTA+TGG 0.451412 2_1:-67394699 Msa0219660:CDS
AACCAAAACTTCACTTGTAA+TGG 0.453525 2_1:+67395732 None:intergenic
GGAGGAGATATGTATGGAGC+TGG 0.454117 2_1:-67394776 Msa0219660:CDS
AACCTTAAAGAAGGATAAAA+CGG 0.454387 2_1:+67391158 None:intergenic
ATGAGGAGGCAAGAGAACTT+AGG 0.455868 2_1:-67391600 Msa0219660:three_prime_UTR
ACAGCATCAGATCCAAGAAA+TGG 0.457226 2_1:-67395971 Msa0219660:CDS
GGGCGAGGAGGAACTGATGA+AGG 0.461521 2_1:+67394842 None:intergenic
TTCTTGGACAACTCCACCAT+TGG 0.466612 2_1:+67392530 None:intergenic
GGACTGAGAGGATTAAGGTT+CGG 0.467189 2_1:-67391506 Msa0219660:three_prime_UTR
GATGGGACAACCACACCAAA+TGG 0.467628 2_1:-67391958 Msa0219660:CDS
TGGTGGAGTTGTCCAAGAAA+TGG 0.474459 2_1:-67392526 Msa0219660:CDS
CTCTTGTGCAGTTAAGAAGA+AGG 0.474651 2_1:-67391652 Msa0219660:intron
TCAATGAAGAGGAATATGTT+AGG 0.476700 2_1:-67394607 Msa0219660:CDS
TGTCGAATAATTCATCTTCA+CGG 0.483352 2_1:+67396091 None:intergenic
GAAGATGAAGAAGATGAAGA+AGG 0.496661 2_1:+67397714 None:intergenic
AAGAACCTTTGAGTAGCCAT+TGG 0.502278 2_1:+67393951 None:intergenic
TCCTACGTACTTGGCAGCAA+TGG 0.502677 2_1:+67394895 None:intergenic
GAGAGTTGTACGGATTCAAC+AGG 0.503171 2_1:-67392090 Msa0219660:CDS
CGCCCTCTAGAACTCGGCAT+TGG 0.503902 2_1:-67394824 Msa0219660:CDS
CACTGGAAGTGCTATCAACT+GGG 0.506183 2_1:-67394299 Msa0219660:CDS
ATTGAATGCATGTTACTAGC+TGG 0.506437 2_1:+67396813 None:intergenic
AGATCAAGAAGAAGGCCTTC+TGG 0.506911 2_1:-67393994 Msa0219660:CDS
AGAACCTTTGAGTAGCCATT+GGG 0.507291 2_1:+67393952 None:intergenic
TTCATCTCTCTCTCTATCCC+AGG 0.507918 2_1:-67396748 Msa0219660:intron
CAATGCCAGCTGGTCTTCCT+GGG 0.508862 2_1:+67393379 None:intergenic
CTCATTGGAATGGCACAAAT+GGG 0.511283 2_1:-67394671 Msa0219660:CDS
CAGAGAAAACTGTGGACCAT+TGG 0.512102 2_1:+67394343 None:intergenic
ACATTTCAAAACCTTAAAGA+AGG 0.512833 2_1:+67391149 None:intergenic
GGAATTGGAGGAGATATGTA+TGG 0.514079 2_1:-67394782 Msa0219660:CDS
TGAGGAGGCAAGAGAACTTA+GGG 0.514455 2_1:-67391599 Msa0219660:three_prime_UTR
CTTTCTCTAGTTGGCACAAG+TGG 0.516999 2_1:+67394108 None:intergenic
TGCTATCAACTGGGGTGGCA+GGG 0.518257 2_1:-67394290 Msa0219660:CDS
ACTGATGAAGGGGAGAGTAG+TGG 0.520729 2_1:+67394854 None:intergenic
GCTGCTATGGAGGAACTCAT+TGG 0.521925 2_1:-67394686 Msa0219660:CDS
TTGTGGTTTATAAGAACCAA+TGG 0.522609 2_1:-67394359 Msa0219660:intron
GCTTCACACTTAAAACCAGC+TGG 0.523425 2_1:+67394557 None:intergenic
TGAAGAAGGTGAGAGGACAA+AGG 0.524909 2_1:+67397728 None:intergenic
AGGAACTAAGCAGAGAGTTA+GGG 0.525015 2_1:-67395761 Msa0219660:CDS
TTCATTGCAACTATGTCTAC+AGG 0.525326 2_1:+67392048 None:intergenic
CAGCCAAATCTAATGGAAGC+TGG 0.529949 2_1:-67396189 Msa0219660:CDS
TGTGGGAATGTTTGTTGCCA+TGG 0.531917 2_1:+67393684 None:intergenic
GGAGGACAACCAGGAATTGG+AGG 0.533463 2_1:-67394794 Msa0219660:CDS
TGTGGTGGACCAACTGCTAT+CGG 0.533810 2_1:-67395480 Msa0219660:CDS
GAACAAACGTACTCAAATGA+AGG 0.534903 2_1:-67395706 Msa0219660:intron
TTTCCCACTTACCAAGAGGA+AGG 0.535363 2_1:+67397437 None:intergenic
GATATTACAAGAGAGTTGTA+CGG 0.536286 2_1:-67392100 Msa0219660:CDS
ACCAACACCTCCATTTGGTG+TGG 0.537258 2_1:+67391948 None:intergenic
GACATTTCTCCGATAGCAGT+TGG 0.537579 2_1:+67395471 None:intergenic
CACAAATGGGTGATCCACTT+TGG 0.540052 2_1:-67394658 Msa0219660:CDS
GAAATTAACCACTGTTTGCA+TGG 0.541790 2_1:+67391193 None:intergenic
AAAGAAATAGAGTGAACGGA+TGG 0.543476 2_1:+67397767 None:intergenic
AGTAACATGCATTCAATGAT+CGG 0.546113 2_1:-67396807 Msa0219660:five_prime_UTR
GCTTCTTGTCCTAATTGTGG+TGG 0.548941 2_1:-67395495 Msa0219660:CDS
CTCAGTTGGTCGTTCTGAGA+AGG 0.549427 2_1:+67391528 None:intergenic
CTCGGCATTGGTGGTTTCGG+AGG 0.549851 2_1:-67394812 Msa0219660:CDS
CTTTCGATGAACATCACTTG+AGG 0.550398 2_1:-67395449 Msa0219660:CDS
GGTGAAACTGGACATGGTGG+TGG 0.551703 2_1:-67391928 Msa0219660:CDS
ATGCATTTGGCGCAAAACGT+TGG 0.552124 2_1:-67393747 Msa0219660:CDS
CTTCTTCTTGATCTGGCAGA+AGG 0.552288 2_1:+67394003 None:intergenic
GGCGAGGAGGAACTGATGAA+GGG 0.553167 2_1:+67394843 None:intergenic
TTATTGCTTGTACTGTTGAG+AGG 0.553910 2_1:-67391816 Msa0219660:CDS
CCACCAATGCCGAGTTCTAG+AGG 0.555033 2_1:+67394821 None:intergenic
ATTGGTTGATTCGGTTCCAA+CGG 0.555616 2_1:-67391878 Msa0219660:CDS
TATTGTAAGCAACATGCTGA+TGG 0.557163 2_1:-67394072 Msa0219660:CDS
CTTCTGCCAGATCAAGAAGA+AGG 0.558646 2_1:-67394002 Msa0219660:CDS
AAGAAGATGAAGAAGGTGAG+AGG 0.558791 2_1:+67397721 None:intergenic
CTAGTTGGCACAAGTGGTGA+AGG 0.562933 2_1:+67394114 None:intergenic
AATAGAGTGAACGGATGGAG+AGG 0.563194 2_1:+67397772 None:intergenic
TCTTGTGCAGTTAAGAAGAA+GGG 0.563569 2_1:-67391651 Msa0219660:intron
GGAATTGGTCCAAAACCAGC+TGG 0.564202 2_1:-67394572 Msa0219660:CDS
GGATTTGCTATACTTCCAGA+TGG 0.564453 2_1:-67391976 Msa0219660:CDS
CAGTTAAGAAGAAGGGCAAA+GGG 0.565908 2_1:-67391644 Msa0219660:three_prime_UTR
ATGTGCATAAGCTTCTGTGC+TGG 0.567127 2_1:-67393492 Msa0219660:CDS
ACCACACCAAATGGAGGTGT+TGG 0.567141 2_1:-67391949 Msa0219660:CDS
TTATTTATATTTAAAACGGA+AGG 0.567607 2_1:+67391449 None:intergenic
TAGTGATAACAAACCAAGAT+GGG 0.567631 2_1:-67393545 Msa0219660:CDS
TTGATCTGGCAGAAGGACTA+GGG 0.567829 2_1:+67394010 None:intergenic
TCTTGAATTAAGCAACCAGA+AGG 0.568304 2_1:+67393979 None:intergenic
ATGCCGAGTTCTAGAGGGCG+AGG 0.568671 2_1:+67394827 None:intergenic
ATAGCAACTACCCTTCCTCT+TGG 0.569307 2_1:-67397448 Msa0219660:intron
GGTGGTTTCGGAGGACAACC+AGG 0.570493 2_1:-67394803 Msa0219660:CDS
GATGACCCAGGAAGACCAGC+TGG 0.571107 2_1:-67393384 Msa0219660:CDS
GATCTTCTTAGATCAATAAG+TGG 0.572048 2_1:-67394752 Msa0219660:CDS
TTAGTGATAACAAACCAAGA+TGG 0.574822 2_1:-67393546 Msa0219660:intron
ATTGGTTTATCAGCTTCAGT+AGG 0.576989 2_1:+67394728 None:intergenic
TAACCTTGTTGAGATTCTCA+TGG 0.576995 2_1:-67394498 Msa0219660:CDS
CACAGGAGCTGATGATGTAA+GGG 0.577558 2_1:-67393427 Msa0219660:CDS
GCACTTAGAACAATGCCAGC+TGG 0.578109 2_1:+67393369 None:intergenic
AACATTCCCACAGTCGATGT+TGG 0.581462 2_1:-67393673 Msa0219660:CDS
TGTCCACGTGTGTGCTGTTG+AGG 0.582831 2_1:+67393461 None:intergenic
TAATCCTCTCAGTCCTCAGT+TGG 0.583524 2_1:+67391514 None:intergenic
TGAATGTGGTTCTAAATGGA+GGG 0.584402 2_1:-67392029 Msa0219660:CDS
TTCCCACTTACCAAGAGGAA+GGG 0.587238 2_1:+67397438 None:intergenic
TGTTGAGATTCTCATGGATG+TGG 0.587472 2_1:-67394492 Msa0219660:intron
TGGGATATCCTTTCCAATGG+TGG 0.588001 2_1:-67392543 Msa0219660:CDS
AATGCTTCTTGTCCTAATTG+TGG 0.590261 2_1:-67395498 Msa0219660:CDS
TGATTGTGAAATATGCAAGC+TGG 0.590342 2_1:-67396846 Msa0219660:five_prime_UTR
GGATCTGATGCTGTGTATGA+CGG 0.590628 2_1:+67395980 None:intergenic
CCCTGATGACAAGCAAAGGA+AGG 0.591678 2_1:-67395781 Msa0219660:CDS
AGTAGTGGATAGCTCACCAC+TGG 0.592239 2_1:+67394869 None:intergenic
CTTCTCAGAACGACCAACTG+AGG 0.592750 2_1:-67391527 Msa0219660:three_prime_UTR
ATGGGTTGAGCACGTTGAAG+TGG 0.594613 2_1:-67393818 Msa0219660:CDS
GCTAGCTGTTGCTGCTATGG+AGG 0.594717 2_1:-67394696 Msa0219660:CDS
ATTCCCACAGTCGATGTTGG+CGG 0.595223 2_1:-67393670 Msa0219660:intron
TGGACAACACTTTCAGGCAC+AGG 0.595843 2_1:-67393444 Msa0219660:CDS
CCTCCTCGCCCTCTAGAACT+CGG 0.597818 2_1:-67394830 Msa0219660:CDS
GCAACATGCTGATGGAACTT+GGG 0.599510 2_1:-67394064 Msa0219660:CDS
ATGGAACCTCCTTCAAGTGT+AGG 0.599518 2_1:+67394632 None:intergenic
GAATGTGGTTCTAAATGGAG+GGG 0.601539 2_1:-67392028 Msa0219660:CDS
AAATTCTCGCCTAAGAGAAG+AGG 0.601879 2_1:-67395421 Msa0219660:intron
GGACAACTCCACCATTGGAA+AGG 0.603145 2_1:+67392535 None:intergenic
GTTTGCAGACTCAACAAGAG+AGG 0.605816 2_1:-67395596 Msa0219660:intron
TGTCTCAAGAGCAATGACAC+TGG 0.606529 2_1:-67394316 Msa0219660:CDS
GATACCGCCAACATCGACTG+TGG 0.611425 2_1:+67393666 None:intergenic
CACCAATGCCGAGTTCTAGA+GGG 0.615823 2_1:+67394822 None:intergenic
GCAGTTAAGAAGAAGGGCAA+AGG 0.617155 2_1:-67391645 Msa0219660:intron
AACTTCGTGCCGATAACATG+AGG 0.617798 2_1:-67395539 Msa0219660:CDS
CACACCCTGATGACAAGCAA+AGG 0.619885 2_1:-67395785 Msa0219660:CDS
CAGTGGGATATCCTTTCCAA+TGG 0.619986 2_1:-67392546 Msa0219660:CDS
GGAAGTATAGCAAATCCAGA+TGG 0.620130 2_1:+67391982 None:intergenic
AGGTTCCATACTCAATGAAG+AGG 0.621981 2_1:-67394618 Msa0219660:CDS
TATGGAGGAACTCATTGGAA+TGG 0.622262 2_1:-67394681 Msa0219660:CDS
TGATGGAACTTGGGCAGTAG+TGG 0.623796 2_1:-67394055 Msa0219660:CDS
AGAGAGATAGAAGCTAGAAG+AGG 0.624084 2_1:+67397471 None:intergenic
TTAATTCAAGAAATGCCCAA+TGG 0.624612 2_1:-67393967 Msa0219660:CDS
AATGCCCAATGGCTACTCAA+AGG 0.629953 2_1:-67393956 Msa0219660:intron
GATTTGCTATACTTCCAGAT+GGG 0.631821 2_1:-67391975 Msa0219660:CDS
TAACGTTTCTTCTTAGCACG+AGG 0.632532 2_1:+67396006 None:intergenic
GGAAGTGCTATCAACTGGGG+TGG 0.632566 2_1:-67394295 Msa0219660:CDS
GCGAGGAGGAACTGATGAAG+GGG 0.636810 2_1:+67394844 None:intergenic
TCAAGTGTAGGCAACCAAAG+TGG 0.640121 2_1:+67394644 None:intergenic
CTACAATGGTGCATTACAAG+TGG 0.640429 2_1:-67394265 Msa0219660:intron
ATACCGCCAACATCGACTGT+GGG 0.642719 2_1:+67393667 None:intergenic
GTGCCTCAACAGCACACACG+TGG 0.644853 2_1:-67393464 Msa0219660:CDS
TCTGAGAAGGAAATCTTGCA+AGG 0.646214 2_1:+67391541 None:intergenic
GACAATAGAAGGAACATGAG+AGG 0.647575 2_1:+67391244 None:intergenic
ATGAATGTGGTTCTAAATGG+AGG 0.647763 2_1:-67392030 Msa0219660:CDS
GGGGTGGCAGGGAACTACAA+TGG 0.649866 2_1:-67394279 Msa0219660:CDS
ACGGATGGAGAGGAAAATTG+TGG 0.650847 2_1:+67397782 None:intergenic
TGGTTGCCTACACTTGAAGG+AGG 0.652894 2_1:-67394638 Msa0219660:CDS
GGAAGAAACAACAATAACGT+TGG 0.654744 2_1:-67396786 Msa0219660:five_prime_UTR
AGATGAAAACTCAAGAAGTG+AGG 0.655242 2_1:-67393292 Msa0219660:intron
CACGTTGAAGTGGATGATAG+AGG 0.666521 2_1:-67393808 Msa0219660:CDS
CATCCATGAGAATCTCAACA+AGG 0.674971 2_1:+67394495 None:intergenic
ACGACCAACTGAGGACTGAG+AGG 0.677160 2_1:-67391518 Msa0219660:three_prime_UTR
CGTAAGAGTGTAGATGACCC+AGG 0.679064 2_1:-67393396 Msa0219660:CDS
GGGACAACCACACCAAATGG+AGG 0.680239 2_1:-67391955 Msa0219660:CDS
GCCATTGCTGCCAAGTACGT+AGG 0.683580 2_1:-67394896 Msa0219660:CDS
CCGAGTTCTAGAGGGCGAGG+AGG 0.684847 2_1:+67394830 None:intergenic
GTTGGTGAAACTGGACATGG+TGG 0.688482 2_1:-67391931 Msa0219660:CDS
GGTGTTGGTGAAACTGGACA+TGG 0.690118 2_1:-67391934 Msa0219660:CDS
TGAAAGACTTGCTAGTGCCA+TGG 0.696212 2_1:-67393701 Msa0219660:CDS
TTGCACTACCATGCAAACAG+TGG 0.696826 2_1:-67391201 Msa0219660:three_prime_UTR
CAAGTACGTAGGAAAGCCAG+TGG 0.711066 2_1:-67394885 Msa0219660:CDS
AGACATAGTTGCAATGAATG+TGG 0.720864 2_1:-67392043 Msa0219660:CDS
GACAATGCCAGAGAAAACTG+TGG 0.735059 2_1:+67394335 None:intergenic
ACTGGAAGTGCTATCAACTG+GGG 0.765115 2_1:-67394298 Msa0219660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAAACTAAATAATATT+GGG + chr2_1:67391813-67391832 None:intergenic 10.0%
!! AAACAAAAACTAAATAATAT+TGG + chr2_1:67391814-67391833 None:intergenic 10.0%
!!! AATTTTTGATAAAAATGTTA+TGG + chr2_1:67392195-67392214 None:intergenic 10.0%
!!! ATGTTAATTTAATTTGATAA+AGG - chr2_1:67392254-67392273 Msa0219660:intron 10.0%
!!! TGTTAATTTAATTTGATAAA+GGG - chr2_1:67392255-67392274 Msa0219660:intron 10.0%
!!! GGATTTTTTTATTTTATTTT+TGG - chr2_1:67393238-67393257 Msa0219660:intron 10.0%
!!! TTTTACAAAAACAATGATAT+CGG + chr2_1:67391531-67391550 None:intergenic 15.0%
!!! TTGTTTTTGTAAAACTAAAT+CGG - chr2_1:67391537-67391556 Msa0219660:three_prime_UTR 15.0%
!! AATGATAAAGAAAAAAAATC+TGG - chr2_1:67391776-67391795 Msa0219660:exon 15.0%
!! ACAAAAACTAAATAATATTG+GGG + chr2_1:67391812-67391831 None:intergenic 15.0%
!! AGAGAAAAAAAATTAAAAGA+AGG - chr2_1:67392009-67392028 Msa0219660:CDS 15.0%
!!! TTTAACTGTTTTTTCTTTTT+TGG - chr2_1:67393035-67393054 Msa0219660:intron 15.0%
!!! TTAACTGTTTTTTCTTTTTT+GGG - chr2_1:67393036-67393055 Msa0219660:intron 15.0%
!!! AAAATTAACTAATGTTGTTT+TGG - chr2_1:67393066-67393085 Msa0219660:intron 15.0%
!!! GGTATTTGATTTTATTAATT+TGG - chr2_1:67393214-67393233 Msa0219660:intron 15.0%
!!! ATTTGATTTTATTAATTTGG+TGG - chr2_1:67393217-67393236 Msa0219660:intron 15.0%
!!! AGAATGATGTTTTTATTTTT+TGG - chr2_1:67393281-67393300 Msa0219660:intron 15.0%
!!! TCTTATATTTTAATTGCATT+TGG + chr2_1:67393589-67393608 None:intergenic 15.0%
!!! AAATTTTGACAAAAACAAAA+TGG + chr2_1:67393861-67393880 None:intergenic 15.0%
!!! ATTTTAACCTTCTTTAATTT+TGG - chr2_1:67393952-67393971 Msa0219660:intron 15.0%
!! TATAAGTTAATTTATTTCCT+AGG - chr2_1:67395054-67395073 Msa0219660:intron 15.0%
!!! TTATCTAATCTTAAAGTTTT+AGG - chr2_1:67395680-67395699 Msa0219660:intron 15.0%
!! AATTTGTAAGAAAAACTATA+AGG + chr2_1:67396106-67396125 None:intergenic 15.0%
!!! TATAGTTTTTCTTACAAATT+AGG - chr2_1:67396106-67396125 Msa0219660:CDS 15.0%
!!! ATAGTTTTTCTTACAAATTA+GGG - chr2_1:67396107-67396126 Msa0219660:CDS 15.0%
!!! TTTTTATATCATTGTGTAAT+TGG + chr2_1:67396176-67396195 None:intergenic 15.0%
!!! TTCAATTTAGATTTTTCATA+GGG + chr2_1:67396693-67396712 None:intergenic 15.0%
!!! TTTCAATTTAGATTTTTCAT+AGG + chr2_1:67396694-67396713 None:intergenic 15.0%
!!! TTATTTATATTTAAAACGGA+AGG + chr2_1:67397453-67397472 None:intergenic 15.0%
!! AATAAAAAGTCAAATGTATT+TGG - chr2_1:67397468-67397487 Msa0219660:five_prime_UTR 15.0%
!! AAGATGAATATGAAAAAAGA+AGG + chr2_1:67391345-67391364 None:intergenic 20.0%
!!! TAGTTTTTGTTTATAAAGTG+AGG - chr2_1:67391822-67391841 Msa0219660:CDS 20.0%
!!! TTTTTCTCTCATGTTATTTA+CGG - chr2_1:67391869-67391888 Msa0219660:CDS 20.0%
!!! TTTTTTTATAAGTCAACAGT+TGG - chr2_1:67392312-67392331 Msa0219660:intron 20.0%
!!! AAAGGTTTTTTTGTTTGTTT+AGG + chr2_1:67392356-67392375 None:intergenic 20.0%
!! TAAATAGTGAAAAAGTGAAA+AGG + chr2_1:67392433-67392452 None:intergenic 20.0%
!! ATTAACACCAAAATTAAAGA+AGG + chr2_1:67393962-67393981 None:intergenic 20.0%
!! TATGAGTACAAAATTAAGAT+TGG - chr2_1:67394988-67395007 Msa0219660:intron 20.0%
!! ATGAGTACAAAATTAAGATT+GGG - chr2_1:67394989-67395008 Msa0219660:intron 20.0%
!! AATTTATTTCCTAGGTTATA+TGG - chr2_1:67395062-67395081 Msa0219660:intron 20.0%
!! ATTTATTTCCTAGGTTATAT+GGG - chr2_1:67395063-67395082 Msa0219660:intron 20.0%
!!! AGAAATTCAAAAACTCTTTT+TGG + chr2_1:67395584-67395603 None:intergenic 20.0%
!!! CTTTAAGATTAGATAATGAT+TGG + chr2_1:67395676-67395695 None:intergenic 20.0%
!! ATTATAGAGTCTTCATTAAA+AGG + chr2_1:67395938-67395957 None:intergenic 20.0%
!! GATGACATAAGATAAAAAAA+GGG + chr2_1:67395983-67396002 None:intergenic 20.0%
!! AGATGACATAAGATAAAAAA+AGG + chr2_1:67395984-67396003 None:intergenic 20.0%
!!! ATGTACTGATTTTTTTACAA+GGG + chr2_1:67396054-67396073 None:intergenic 20.0%
!!! AATGTACTGATTTTTTTACA+AGG + chr2_1:67396055-67396074 None:intergenic 20.0%
!!! TTGTGTAATTGGATATTTTA+TGG + chr2_1:67396165-67396184 None:intergenic 20.0%
!! ATGGTATAAAAATAACCAAA+AGG - chr2_1:67396202-67396221 Msa0219660:exon 20.0%
!!! CAAAAATTTGTTCAAGAATT+TGG + chr2_1:67396231-67396250 None:intergenic 20.0%
!! AATGAATATTCGATCAAAAT+TGG + chr2_1:67396642-67396661 None:intergenic 20.0%
!! AATCTAAATTGAAAATGTCT+TGG - chr2_1:67396700-67396719 Msa0219660:intron 20.0%
!!! ATTTCAAATATTGGTTGATT+CGG - chr2_1:67397012-67397031 Msa0219660:intron 20.0%
!! TTAGGGTTATATAAAAAAGA+CGG - chr2_1:67397317-67397336 Msa0219660:intron 20.0%
!!! ACTAAATACATATGACTTTT+TGG - chr2_1:67397502-67397521 Msa0219660:five_prime_UTR 20.0%
!! TATAGATATATTGTCTTAGA+AGG + chr2_1:67397580-67397599 None:intergenic 20.0%
! AGAAAAAGAAATAGAGTGAA+CGG + chr2_1:67391139-67391158 None:intergenic 25.0%
! AAGGTAGTAGATTGTTTAAA+GGG + chr2_1:67391227-67391246 None:intergenic 25.0%
! AAAGGTAGTAGATTGTTTAA+AGG + chr2_1:67391228-67391247 None:intergenic 25.0%
! TGAATATGAAAAAAGAAGGA+AGG + chr2_1:67391341-67391360 None:intergenic 25.0%
! GAAAAAATGTAGATCTACTA+TGG + chr2_1:67391406-67391425 None:intergenic 25.0%
! CAGAAAGAAAGAAAAAAAGA+TGG + chr2_1:67391659-67391678 None:intergenic 25.0%
!!! ATTAATGTGTCACTTCAAAA+AGG + chr2_1:67391903-67391922 None:intergenic 25.0%
!! TCTTTTGTTAGATCCTTAAA+TGG + chr2_1:67391986-67392005 None:intergenic 25.0%
!!! ATTTTGACTTTATCTTTGCA+AGG - chr2_1:67392284-67392303 Msa0219660:intron 25.0%
!!! TTTTGACTTTATCTTTGCAA+GGG - chr2_1:67392285-67392304 Msa0219660:intron 25.0%
! AAAACATGTGAATTTGACTA+AGG + chr2_1:67392481-67392500 None:intergenic 25.0%
! GATTGAAAACAATAAGCATT+TGG - chr2_1:67392660-67392679 Msa0219660:intron 25.0%
!!! TAATGTTGTTTTGGTTGTTT+AGG - chr2_1:67393075-67393094 Msa0219660:intron 25.0%
!!! TTGGTTGTTTAGGTTTTTTA+AGG - chr2_1:67393085-67393104 Msa0219660:intron 25.0%
! CACATATATCAAAATCAATC+TGG - chr2_1:67393558-67393577 Msa0219660:intron 25.0%
! AGACGATAAATATACATTCA+AGG - chr2_1:67393606-67393625 Msa0219660:intron 25.0%
! TAAATATACATTCAAGGTCT+TGG - chr2_1:67393612-67393631 Msa0219660:intron 25.0%
! GATCGAAACCTATATATTTA+TGG - chr2_1:67393678-67393697 Msa0219660:CDS 25.0%
! TCAGACTTCCATAAATATAT+AGG + chr2_1:67393689-67393708 None:intergenic 25.0%
! GATAGAGATAGAATAACAAT+AGG + chr2_1:67393901-67393920 None:intergenic 25.0%
!! GTGTTAATTTTCAGATTGAT+AGG - chr2_1:67393974-67393993 Msa0219660:CDS 25.0%
! ACAAAATAACTTTCTCTAGT+TGG + chr2_1:67394803-67394822 None:intergenic 25.0%
!!! CTAGAGAAAGTTATTTTGTA+AGG - chr2_1:67394804-67394823 Msa0219660:CDS 25.0%
!!! ATTGATTATTTTTCCCTATG+TGG - chr2_1:67395025-67395044 Msa0219660:intron 25.0%
!!! CTTTTTTTTCTTCCTTTAGA+TGG - chr2_1:67395291-67395310 Msa0219660:intron 25.0%
! TCATGAAAAATTCCATCTAA+AGG + chr2_1:67395306-67395325 None:intergenic 25.0%
!! AATTCAAAAACTCTTTTTGG+TGG + chr2_1:67395581-67395600 None:intergenic 25.0%
! TTGCATTATTGTGTTATCAT+AGG - chr2_1:67395703-67395722 Msa0219660:intron 25.0%
! AAGCAATTGATATAAGATGA+TGG + chr2_1:67395858-67395877 None:intergenic 25.0%
! TATTTGAGCAGAATAAATGT+GGG + chr2_1:67396535-67396554 None:intergenic 25.0%
! ATATTTGAGCAGAATAAATG+TGG + chr2_1:67396536-67396555 None:intergenic 25.0%
! TTCTGCTCAAATATCTATAA+CGG - chr2_1:67396542-67396561 Msa0219660:intron 25.0%
! TATAACGGTTTGATCAAAAT+TGG - chr2_1:67396557-67396576 Msa0219660:intron 25.0%
! AATATTCGATCAAAATTGGA+CGG + chr2_1:67396638-67396657 None:intergenic 25.0%
! GTTGCATTTACTATTATCTA+AGG + chr2_1:67397429-67397448 None:intergenic 25.0%
! AACCTTAAAGAAGGATAAAA+CGG + chr2_1:67397744-67397763 None:intergenic 25.0%
! ACATTTCAAAACCTTAAAGA+AGG + chr2_1:67397753-67397772 None:intergenic 25.0%
!!! AGGTTTTTTTGAGGAAGTTA+TGG + chr2_1:67391321-67391340 None:intergenic 30.0%
!!! AAAGAAGGAAGGTTTTTTTG+AGG + chr2_1:67391330-67391349 None:intergenic 30.0%
AGTAACATGCATTCAATGAT+CGG - chr2_1:67392092-67392111 Msa0219660:CDS 30.0%
AAAAAGAAGAAGATTCACCT+GGG + chr2_1:67392171-67392190 None:intergenic 30.0%
AAAAAAGAAGAAGATTCACC+TGG + chr2_1:67392172-67392191 None:intergenic 30.0%
GACTGGTAAAATACAAAGAA+AGG + chr2_1:67392374-67392393 None:intergenic 30.0%
AAAAGTGAAAAGGAATAACG+CGG + chr2_1:67392423-67392442 None:intergenic 30.0%
!! TTGTTTTGTGTCATGTCAAA+TGG + chr2_1:67392755-67392774 None:intergenic 30.0%
TGTCGAATAATTCATCTTCA+CGG + chr2_1:67392811-67392830 None:intergenic 30.0%
AACCAAAACTTCACTTGTAA+TGG + chr2_1:67393170-67393189 None:intergenic 30.0%
TTCTCTAAACCTCATGTTAT+CGG + chr2_1:67393372-67393391 None:intergenic 30.0%
TATGAGATTGAAATGAACAC+CGG - chr2_1:67393715-67393734 Msa0219660:CDS 30.0%
! GATTGATGCGATATGAATTT+TGG + chr2_1:67393758-67393777 None:intergenic 30.0%
GATCTTCTTAGATCAATAAG+TGG - chr2_1:67394147-67394166 Msa0219660:intron 30.0%
ATATTCCTCTTCATTGAGTA+TGG + chr2_1:67394289-67394308 None:intergenic 30.0%
TCAATGAAGAGGAATATGTT+AGG - chr2_1:67394292-67394311 Msa0219660:CDS 30.0%
! TGACATTATTTTCGTTCTTG+TGG - chr2_1:67394523-67394542 Msa0219660:CDS 30.0%
TTGTGGTTTATAAGAACCAA+TGG - chr2_1:67394540-67394559 Msa0219660:CDS 30.0%
TTAATTCAAGAAATGCCCAA+TGG - chr2_1:67394932-67394951 Msa0219660:intron 30.0%
ACTTATAGTTAAGCCACATA+GGG + chr2_1:67395041-67395060 None:intergenic 30.0%
AACTTATAGTTAAGCCACAT+AGG + chr2_1:67395042-67395061 None:intergenic 30.0%
TTAGTGATAACAAACCAAGA+TGG - chr2_1:67395353-67395372 Msa0219660:intron 30.0%
TAGTGATAACAAACCAAGAT+GGG - chr2_1:67395354-67395373 Msa0219660:intron 30.0%
ATAGAGTCTTCATTAAAAGG+AGG + chr2_1:67395935-67395954 None:intergenic 30.0%
! TGGACTTTTCAATTCAAACT+CGG - chr2_1:67396577-67396596 Msa0219660:intron 30.0%
GAATTATGCATTCACACATT+TGG + chr2_1:67396671-67396690 None:intergenic 30.0%
! GTAATATCAACATGTTGCTT+TGG + chr2_1:67396787-67396806 None:intergenic 30.0%
GATATTACAAGAGAGTTGTA+CGG - chr2_1:67396799-67396818 Msa0219660:five_prime_UTR 30.0%
GACTGTTGCATTTCAAATAT+TGG - chr2_1:67397003-67397022 Msa0219660:intron 30.0%
CATCAAGTCATCTAATGTAA+CGG - chr2_1:67397140-67397159 Msa0219660:intron 30.0%
GGCTTATATTCAAGACTATA+TGG - chr2_1:67397523-67397542 Msa0219660:five_prime_UTR 30.0%
AAAGCACAAATGACAATAGA+AGG + chr2_1:67397669-67397688 None:intergenic 30.0%
! ATCCGTTTTATCCTTCTTTA+AGG - chr2_1:67397739-67397758 Msa0219660:five_prime_UTR 30.0%
CTGAAATTGAGTAGACAAAA+TGG + chr2_1:67397786-67397805 None:intergenic 30.0%
AAAGAAATAGAGTGAACGGA+TGG + chr2_1:67391135-67391154 None:intergenic 35.0%
GAAGATGAAGAAGATGAAGA+AGG + chr2_1:67391188-67391207 None:intergenic 35.0%
! GAAAGCTTGATGAGTGTTTT+TGG + chr2_1:67391266-67391285 None:intergenic 35.0%
GTTATGGAAAGTTGGGTATA+TGG + chr2_1:67391305-67391324 None:intergenic 35.0%
TGAGGAAGTTATGGAAAGTT+GGG + chr2_1:67391312-67391331 None:intergenic 35.0%
TTGAGGAAGTTATGGAAAGT+TGG + chr2_1:67391313-67391332 None:intergenic 35.0%
!!! TTTTTTTCCCACTTACCAAG+AGG + chr2_1:67391469-67391488 None:intergenic 35.0%
TTCTAGCAACCCTAACTATA+TGG + chr2_1:67391603-67391622 None:intergenic 35.0%
CATCATCTGAAAGCCATTTA+AGG - chr2_1:67391970-67391989 Msa0219660:CDS 35.0%
TGATTGTGAAATATGCAAGC+TGG - chr2_1:67392053-67392072 Msa0219660:CDS 35.0%
ATTGAATGCATGTTACTAGC+TGG + chr2_1:67392089-67392108 None:intergenic 35.0%
GGAAGAAACAACAATAACGT+TGG - chr2_1:67392113-67392132 Msa0219660:CDS 35.0%
! AACAATAACGTTGGTGTCTT+TGG - chr2_1:67392122-67392141 Msa0219660:CDS 35.0%
CAAGTATCCTTCTCGTTATT+CGG - chr2_1:67392394-67392413 Msa0219660:intron 35.0%
!!! GACTAAGGTTGATGTTTTTG+AGG + chr2_1:67392466-67392485 None:intergenic 35.0%
AATGTTCCAGCCAAATCTAA+TGG - chr2_1:67392703-67392722 Msa0219660:intron 35.0%
AATTCATCTTCACGGATTCT+TGG + chr2_1:67392803-67392822 None:intergenic 35.0%
AATCAAGAAGCTGCTAATTC+TGG - chr2_1:67392857-67392876 Msa0219660:intron 35.0%
TTTCTTACGCTTCCATTTCT+TGG + chr2_1:67392943-67392962 None:intergenic 35.0%
! AGCCATTACAAGTGAAGTTT+TGG - chr2_1:67393165-67393184 Msa0219660:intron 35.0%
GAACAAACGTACTCAAATGA+AGG - chr2_1:67393193-67393212 Msa0219660:intron 35.0%
AATGCTTCTTGTCCTAATTG+TGG - chr2_1:67393401-67393420 Msa0219660:CDS 35.0%
GAATGTATACCTCTTCTCTT+AGG + chr2_1:67393490-67393509 None:intergenic 35.0%
CAGAAACTACACCAAGTTTA+TGG - chr2_1:67393522-67393541 Msa0219660:CDS 35.0%
TATCAATCGCACCATAAACT+TGG + chr2_1:67393536-67393555 None:intergenic 35.0%
! ATTGGTTTATCAGCTTCAGT+AGG + chr2_1:67394174-67394193 None:intergenic 35.0%
ACAGCTAGCTCAATTATCAT+TGG + chr2_1:67394192-67394211 None:intergenic 35.0%
! TATGTTAGGTCTTTTCCTAG+AGG - chr2_1:67394306-67394325 Msa0219660:CDS 35.0%
TAACCTTGTTGAGATTCTCA+TGG - chr2_1:67394401-67394420 Msa0219660:intron 35.0%
TATTGTAAGCAACATGCTGA+TGG - chr2_1:67394827-67394846 Msa0219660:CDS 35.0%
TCTTGAATTAAGCAACCAGA+AGG + chr2_1:67394923-67394942 None:intergenic 35.0%
TACAAGCATCTTGTTAGTTC+TGG - chr2_1:67395127-67395146 Msa0219660:intron 35.0%
TCTTTCACATTGTCGATCTA+AGG + chr2_1:67395185-67395204 None:intergenic 35.0%
!! TAAGTGCTGCAACTTCTTTT+TGG - chr2_1:67395546-67395565 Msa0219660:CDS 35.0%
AGATGAAAACTCAAGAAGTG+AGG - chr2_1:67395607-67395626 Msa0219660:intron 35.0%
TCTTCATTAAAAGGAGGAGT+CGG + chr2_1:67395929-67395948 None:intergenic 35.0%
!! TCAAGAATTTGGTAGCCTTT+TGG + chr2_1:67396220-67396239 None:intergenic 35.0%
! TTTTCAACTCTCGAAAACAG+TGG - chr2_1:67396336-67396355 Msa0219660:intron 35.0%
TTTCAACTCTCGAAAACAGT+GGG - chr2_1:67396337-67396356 Msa0219660:intron 35.0%
!! TAGCAATATGTGCCATTTCT+TGG + chr2_1:67396388-67396407 None:intergenic 35.0%
GAAATGGCACATATTGCTAA+TGG - chr2_1:67396389-67396408 Msa0219660:intron 35.0%
ATTGCTAATGGAAGAGATAC+TGG - chr2_1:67396401-67396420 Msa0219660:intron 35.0%
TTCATTGCAACTATGTCTAC+AGG + chr2_1:67396854-67396873 None:intergenic 35.0%
AGACATAGTTGCAATGAATG+TGG - chr2_1:67396856-67396875 Msa0219660:five_prime_UTR 35.0%
!! GCAATGAATGTGGTTCTAAA+TGG - chr2_1:67396866-67396885 Msa0219660:five_prime_UTR 35.0%
!! ATGAATGTGGTTCTAAATGG+AGG - chr2_1:67396869-67396888 Msa0219660:five_prime_UTR 35.0%
!! TGAATGTGGTTCTAAATGGA+GGG - chr2_1:67396870-67396889 Msa0219660:five_prime_UTR 35.0%
!! GATTTGCTATACTTCCAGAT+GGG - chr2_1:67396924-67396943 Msa0219660:five_prime_UTR 35.0%
TTATTGCTTGTACTGTTGAG+AGG - chr2_1:67397083-67397102 Msa0219660:intron 35.0%
TTGTACTGTTGAGAGGATTA+AGG - chr2_1:67397090-67397109 Msa0219660:intron 35.0%
CGTTACATTAGATGACTTGA+TGG + chr2_1:67397142-67397161 None:intergenic 35.0%
TCTTGTGCAGTTAAGAAGAA+GGG - chr2_1:67397248-67397267 Msa0219660:intron 35.0%
!!! AAGGGAAAAGCATTGCATTT+TGG - chr2_1:67397273-67397292 Msa0219660:intron 35.0%
GAAATTAACCACTGTTTGCA+TGG + chr2_1:67397709-67397728 None:intergenic 35.0%
TGAGAGGACAAAGGAATTGA+AGG + chr2_1:67391165-67391184 None:intergenic 40.0%
AAGAAGATGAAGAAGGTGAG+AGG + chr2_1:67391181-67391200 None:intergenic 40.0%
! TGGACGGTCTAGCTTAAAAA+AGG + chr2_1:67391246-67391265 None:intergenic 40.0%
!!! GCTTGATGAGTGTTTTTGGA+CGG + chr2_1:67391262-67391281 None:intergenic 40.0%
AGAGAGATAGAAGCTAGAAG+AGG + chr2_1:67391431-67391450 None:intergenic 40.0%
TGTCTCCGTCCATATAGTTA+GGG - chr2_1:67391591-67391610 Msa0219660:three_prime_UTR 40.0%
AGCAACCCTAACTATATGGA+CGG + chr2_1:67391599-67391618 None:intergenic 40.0%
! GATTCTTCTGTCAGCTTTAG+CGG + chr2_1:67391938-67391957 None:intergenic 40.0%
CGAATAACGAGAAGGATACT+TGG + chr2_1:67392396-67392415 None:intergenic 40.0%
TGTCCAGCTTCCATTAGATT+TGG + chr2_1:67392716-67392735 None:intergenic 40.0%
TTCGACAGTGCTACAAAATC+TGG - chr2_1:67392824-67392843 Msa0219660:intron 40.0%
TAACGTTTCTTCTTAGCACG+AGG + chr2_1:67392896-67392915 None:intergenic 40.0%
ACAGCATCAGATCCAAGAAA+TGG - chr2_1:67392928-67392947 Msa0219660:intron 40.0%
AAGGAACTAAGCAGAGAGTT+AGG - chr2_1:67393137-67393156 Msa0219660:intron 40.0%
AGGAACTAAGCAGAGAGTTA+GGG - chr2_1:67393138-67393157 Msa0219660:intron 40.0%
CTTTCGATGAACATCACTTG+AGG - chr2_1:67393450-67393469 Msa0219660:CDS 40.0%
AAATTCTCGCCTAAGAGAAG+AGG - chr2_1:67393478-67393497 Msa0219660:CDS 40.0%
!! TGCGATATGAATTTTGGTCG+AGG + chr2_1:67393752-67393771 None:intergenic 40.0%
TACATATCTCCTCCAATTCC+TGG + chr2_1:67394117-67394136 None:intergenic 40.0%
GGAATTGGAGGAGATATGTA+TGG - chr2_1:67394117-67394136 Msa0219660:CDS 40.0%
TATGGAGGAACTCATTGGAA+TGG - chr2_1:67394218-67394237 Msa0219660:intron 40.0%
ACTCATTGGAATGGCACAAA+TGG - chr2_1:67394227-67394246 Msa0219660:intron 40.0%
CTCATTGGAATGGCACAAAT+GGG - chr2_1:67394228-67394247 Msa0219660:intron 40.0%
AGGTTCCATACTCAATGAAG+AGG - chr2_1:67394281-67394300 Msa0219660:CDS 40.0%
! AGGTCTTTTCCTAGAGGAAT+TGG - chr2_1:67394312-67394331 Msa0219660:CDS 40.0%
!! CACTTAAAACCAGCTGGTTT+TGG + chr2_1:67394339-67394358 None:intergenic 40.0%
CATCCATGAGAATCTCAACA+AGG + chr2_1:67394407-67394426 None:intergenic 40.0%
TGTTGAGATTCTCATGGATG+TGG - chr2_1:67394407-67394426 Msa0219660:intron 40.0%
CTACAATGGTGCATTACAAG+TGG - chr2_1:67394634-67394653 Msa0219660:CDS 40.0%
AGAACCTTTGAGTAGCCATT+GGG + chr2_1:67394950-67394969 None:intergenic 40.0%
AAGAACCTTTGAGTAGCCAT+TGG + chr2_1:67394951-67394970 None:intergenic 40.0%
!! GTTAGTTCTGGACATGCATT+TGG - chr2_1:67395139-67395158 Msa0219660:intron 40.0%
ACATACTCTTTCTCCCATCT+TGG + chr2_1:67395370-67395389 None:intergenic 40.0%
!! AAAACTCTTTTTGGTGGCAC+TGG + chr2_1:67395575-67395594 None:intergenic 40.0%
!! GAATGTGGTTCTAAATGGAG+GGG - chr2_1:67396871-67396890 Msa0219660:five_prime_UTR 40.0%
!! GGAAGAAGTGCTACATAATC+TGG + chr2_1:67396899-67396918 None:intergenic 40.0%
TATGTAGCACTTCTTCCATC+TGG - chr2_1:67396902-67396921 Msa0219660:five_prime_UTR 40.0%
! GGAAGTATAGCAAATCCAGA+TGG + chr2_1:67396920-67396939 None:intergenic 40.0%
!! GGATTTGCTATACTTCCAGA+TGG - chr2_1:67396923-67396942 Msa0219660:five_prime_UTR 40.0%
!! ATTGGTTGATTCGGTTCCAA+CGG - chr2_1:67397021-67397040 Msa0219660:intron 40.0%
GGCAAAACTTTCTCTTGGTT+CGG - chr2_1:67397042-67397061 Msa0219660:intron 40.0%
AGGATTAAGGCTTCTTTGTC+TGG - chr2_1:67397103-67397122 Msa0219660:intron 40.0%
CTCTTGTGCAGTTAAGAAGA+AGG - chr2_1:67397247-67397266 Msa0219660:intron 40.0%
CAGTTAAGAAGAAGGGCAAA+GGG - chr2_1:67397255-67397274 Msa0219660:intron 40.0%
! GCATTGCATTTTGGATGATG+AGG - chr2_1:67397282-67397301 Msa0219660:intron 40.0%
! TTGCATTTTGGATGATGAGG+AGG - chr2_1:67397285-67397304 Msa0219660:intron 40.0%
TCTGAGAAGGAAATCTTGCA+AGG + chr2_1:67397361-67397380 None:intergenic 40.0%
GACAATAGAAGGAACATGAG+AGG + chr2_1:67397658-67397677 None:intergenic 40.0%
ACGGATGGAGAGGAAAATTG+TGG + chr2_1:67391120-67391139 None:intergenic 45.0%
AATAGAGTGAACGGATGGAG+AGG + chr2_1:67391130-67391149 None:intergenic 45.0%
TGAAGAAGGTGAGAGGACAA+AGG + chr2_1:67391174-67391193 None:intergenic 45.0%
ATAGCAACTACCCTTCCTCT+TGG - chr2_1:67391451-67391470 Msa0219660:three_prime_UTR 45.0%
TACCCTTCCTCTTGGTAAGT+GGG - chr2_1:67391459-67391478 Msa0219660:three_prime_UTR 45.0%
TTCCCACTTACCAAGAGGAA+GGG + chr2_1:67391464-67391483 None:intergenic 45.0%
TTTCCCACTTACCAAGAGGA+AGG + chr2_1:67391465-67391484 None:intergenic 45.0%
CTGTCTCCGTCCATATAGTT+AGG - chr2_1:67391590-67391609 Msa0219660:three_prime_UTR 45.0%
TTCATCTCTCTCTCTATCCC+AGG - chr2_1:67392151-67392170 Msa0219660:intron 45.0%
AACGAGAAGGATACTTGGAC+TGG + chr2_1:67392391-67392410 None:intergenic 45.0%
CAGCTTCCATTAGATTTGGC+TGG + chr2_1:67392712-67392731 None:intergenic 45.0%
CAGCCAAATCTAATGGAAGC+TGG - chr2_1:67392710-67392729 Msa0219660:intron 45.0%
GGATCTGATGCTGTGTATGA+CGG + chr2_1:67392922-67392941 None:intergenic 45.0%
CCTTCCTTTGCTTGTCATCA+GGG + chr2_1:67393121-67393140 None:intergenic 45.0%
TCCTTCCTTTGCTTGTCATC+AGG + chr2_1:67393122-67393141 None:intergenic 45.0%
GTTTGCAGACTCAACAAGAG+AGG - chr2_1:67393303-67393322 Msa0219660:CDS 45.0%
! AACTTCGTGCCGATAACATG+AGG - chr2_1:67393360-67393379 Msa0219660:CDS 45.0%
GCTTCTTGTCCTAATTGTGG+TGG - chr2_1:67393404-67393423 Msa0219660:CDS 45.0%
GACATTTCTCCGATAGCAGT+TGG + chr2_1:67393431-67393450 None:intergenic 45.0%
GGTTTCGATCCCCTACATTA+GGG + chr2_1:67393668-67393687 None:intergenic 45.0%
AGGTTTCGATCCCCTACATT+AGG + chr2_1:67393669-67393688 None:intergenic 45.0%
CACAAATGGGTGATCCACTT+TGG - chr2_1:67394241-67394260 Msa0219660:intron 45.0%
TCAAGTGTAGGCAACCAAAG+TGG + chr2_1:67394258-67394277 None:intergenic 45.0%
CTTTGGTTGCCTACACTTGA+AGG - chr2_1:67394258-67394277 Msa0219660:intron 45.0%
ATGGAACCTCCTTCAAGTGT+AGG + chr2_1:67394270-67394289 None:intergenic 45.0%
!!! GGTTTTGGACCAATTCCTCT+AGG + chr2_1:67394324-67394343 None:intergenic 45.0%
GCTTCACACTTAAAACCAGC+TGG + chr2_1:67394345-67394364 None:intergenic 45.0%
CAGAGAAAACTGTGGACCAT+TGG + chr2_1:67394559-67394578 None:intergenic 45.0%
! CAATGGTCCACAGTTTTCTC+TGG - chr2_1:67394557-67394576 Msa0219660:CDS 45.0%
GACAATGCCAGAGAAAACTG+TGG + chr2_1:67394567-67394586 None:intergenic 45.0%
TGTCTCAAGAGCAATGACAC+TGG - chr2_1:67394583-67394602 Msa0219660:CDS 45.0%
!! ACACTGGAAGTGCTATCAAC+TGG - chr2_1:67394599-67394618 Msa0219660:CDS 45.0%
!! CACTGGAAGTGCTATCAACT+GGG - chr2_1:67394600-67394619 Msa0219660:CDS 45.0%
!! ACTGGAAGTGCTATCAACTG+GGG - chr2_1:67394601-67394620 Msa0219660:CDS 45.0%
CTTTCTCTAGTTGGCACAAG+TGG + chr2_1:67394794-67394813 None:intergenic 45.0%
AGCAACATGCTGATGGAACT+TGG - chr2_1:67394834-67394853 Msa0219660:CDS 45.0%
GCAACATGCTGATGGAACTT+GGG - chr2_1:67394835-67394854 Msa0219660:CDS 45.0%
!! GGCAGTAGTGGATGTTTCTT+TGG - chr2_1:67394856-67394875 Msa0219660:CDS 45.0%
TTGATCTGGCAGAAGGACTA+GGG + chr2_1:67394892-67394911 None:intergenic 45.0%
CTTCTTCTTGATCTGGCAGA+AGG + chr2_1:67394899-67394918 None:intergenic 45.0%
CTTCTGCCAGATCAAGAAGA+AGG - chr2_1:67394897-67394916 Msa0219660:CDS 45.0%
AGAAGGCCTTCTTCTTGATC+TGG + chr2_1:67394906-67394925 None:intergenic 45.0%
AGATCAAGAAGAAGGCCTTC+TGG - chr2_1:67394905-67394924 Msa0219660:CDS 45.0%
AATGCCCAATGGCTACTCAA+AGG - chr2_1:67394943-67394962 Msa0219660:intron 45.0%
GTGCTCAACCCATATAACCT+AGG + chr2_1:67395074-67395093 None:intergenic 45.0%
ATGCATTTGGCGCAAAACGT+TGG - chr2_1:67395152-67395171 Msa0219660:intron 45.0%
!! TGAAAGACTTGCTAGTGCCA+TGG - chr2_1:67395198-67395217 Msa0219660:intron 45.0%
! TGTGGGAATGTTTGTTGCCA+TGG + chr2_1:67395218-67395237 None:intergenic 45.0%
AACATTCCCACAGTCGATGT+TGG - chr2_1:67395226-67395245 Msa0219660:intron 45.0%
ATGTGCATAAGCTTCTGTGC+TGG - chr2_1:67395407-67395426 Msa0219660:intron 45.0%
! CACAGGAGCTGATGATGTAA+GGG - chr2_1:67395472-67395491 Msa0219660:CDS 45.0%
TGGGTCATCTACACTCTTAC+GGG + chr2_1:67395504-67395523 None:intergenic 45.0%
CTGGGTCATCTACACTCTTA+CGG + chr2_1:67395505-67395524 None:intergenic 45.0%
AGAAGTGAGGTAAGCAAGCA+AGG - chr2_1:67395620-67395639 Msa0219660:intron 45.0%
CAGTGGGATATCCTTTCCAA+TGG - chr2_1:67396353-67396372 Msa0219660:intron 45.0%
TGGGATATCCTTTCCAATGG+TGG - chr2_1:67396356-67396375 Msa0219660:intron 45.0%
TTCTTGGACAACTCCACCAT+TGG + chr2_1:67396372-67396391 None:intergenic 45.0%
TGGTGGAGTTGTCCAAGAAA+TGG - chr2_1:67396373-67396392 Msa0219660:intron 45.0%
GAGAGTTGTACGGATTCAAC+AGG - chr2_1:67396809-67396828 Msa0219660:five_prime_UTR 45.0%
GTTTCACCAACACCTCCATT+TGG + chr2_1:67396959-67396978 None:intergenic 45.0%
!! AATGGAGGTGTTGGTGAAAC+TGG - chr2_1:67396959-67396978 Msa0219660:five_prime_UTR 45.0%
! CCAAGAGAAAGTTTTGCCGT+TGG + chr2_1:67397040-67397059 None:intergenic 45.0%
CCAACGGCAAAACTTTCTCT+TGG - chr2_1:67397037-67397056 Msa0219660:intron 45.0%
!! TTCTCTTGGTTCGGTTGCTA+CGG - chr2_1:67397051-67397070 Msa0219660:intron 45.0%
GCAGTTAAGAAGAAGGGCAA+AGG - chr2_1:67397254-67397273 Msa0219660:intron 45.0%
ATGAGGAGGCAAGAGAACTT+AGG - chr2_1:67397299-67397318 Msa0219660:intron 45.0%
TGAGGAGGCAAGAGAACTTA+GGG - chr2_1:67397300-67397319 Msa0219660:intron 45.0%
TAATCCTCTCAGTCCTCAGT+TGG + chr2_1:67397388-67397407 None:intergenic 45.0%
ACTGAGGACTGAGAGGATTA+AGG - chr2_1:67397388-67397407 Msa0219660:intron 45.0%
GGACTGAGAGGATTAAGGTT+CGG - chr2_1:67397393-67397412 Msa0219660:intron 45.0%
GACTGAGAGGATTAAGGTTC+GGG - chr2_1:67397394-67397413 Msa0219660:intron 45.0%
TTGCACTACCATGCAAACAG+TGG - chr2_1:67397698-67397717 Msa0219660:five_prime_UTR 45.0%
!!! TTATTTTTTTGTAAATAAAT+TGG + chr2_1:67392523-67392542 None:intergenic 5.0%
!! AATGATATAAAAAATAAAAA+TGG - chr2_1:67396183-67396202 Msa0219660:CDS 5.0%
!! ATTAAATATATTAGTAAATA+TGG + chr2_1:67396471-67396490 None:intergenic 5.0%
!! TTAATTAAAAAAACTAATTA+GGG + chr2_1:67397174-67397193 None:intergenic 5.0%
!! ATTAATTAAAAAAACTAATT+AGG + chr2_1:67397175-67397194 None:intergenic 5.0%
!!! CTTTTTATTTATATTTAAAA+CGG + chr2_1:67397457-67397476 None:intergenic 5.0%
CTACCCTTCCTCTTGGTAAG+TGG - chr2_1:67391458-67391477 Msa0219660:three_prime_UTR 50.0%
GCGGTTTCCGAATAACGAGA+AGG + chr2_1:67392404-67392423 None:intergenic 50.0%
CTTTGCTTGTCATCAGGGTG+TGG + chr2_1:67393116-67393135 None:intergenic 50.0%
CACACCCTGATGACAAGCAA+AGG - chr2_1:67393114-67393133 Msa0219660:intron 50.0%
CCCTGATGACAAGCAAAGGA+AGG - chr2_1:67393118-67393137 Msa0219660:intron 50.0%
GCAGTTGGTCCACCACAATT+AGG + chr2_1:67393416-67393435 None:intergenic 50.0%
!! TGTGGTGGACCAACTGCTAT+CGG - chr2_1:67393419-67393438 Msa0219660:CDS 50.0%
GATCCCCTACAACAGTTGCA+CGG - chr2_1:67393634-67393653 Msa0219660:intron 50.0%
TGCACCGTGCAACTGTTGTA+GGG + chr2_1:67393641-67393660 None:intergenic 50.0%
GGTGCAGCAACCCTAATGTA+GGG - chr2_1:67393655-67393674 Msa0219660:intron 50.0%
GTGCAGCAACCCTAATGTAG+GGG - chr2_1:67393656-67393675 Msa0219660:intron 50.0%
GGTCGAGGAGACAACAAAAC+CGG + chr2_1:67393737-67393756 None:intergenic 50.0%
TCCTACGTACTTGGCAGCAA+TGG + chr2_1:67394007-67394026 None:intergenic 50.0%
!! CACTGGCTTTCCTACGTACT+TGG + chr2_1:67394016-67394035 None:intergenic 50.0%
CAAGTACGTAGGAAAGCCAG+TGG - chr2_1:67394014-67394033 Msa0219660:CDS 50.0%
!! AGTAGTGGATAGCTCACCAC+TGG + chr2_1:67394033-67394052 None:intergenic 50.0%
ACTGATGAAGGGGAGAGTAG+TGG + chr2_1:67394048-67394067 None:intergenic 50.0%
!! CACCAATGCCGAGTTCTAGA+GGG + chr2_1:67394080-67394099 None:intergenic 50.0%
!! GAACTCGGCATTGGTGGTTT+CGG - chr2_1:67394084-67394103 Msa0219660:CDS 50.0%
TTCGGAGGACAACCAGGAAT+TGG - chr2_1:67394102-67394121 Msa0219660:CDS 50.0%
GGAGGAGATATGTATGGAGC+TGG - chr2_1:67394123-67394142 Msa0219660:CDS 50.0%
TGAGCTAGCTGTTGCTGCTA+TGG - chr2_1:67394200-67394219 Msa0219660:intron 50.0%
GCTGCTATGGAGGAACTCAT+TGG - chr2_1:67394213-67394232 Msa0219660:intron 50.0%
TGGTTGCCTACACTTGAAGG+AGG - chr2_1:67394261-67394280 Msa0219660:intron 50.0%
GGAATTGGTCCAAAACCAGC+TGG - chr2_1:67394327-67394346 Msa0219660:CDS 50.0%
CTAGTTGGCACAAGTGGTGA+AGG + chr2_1:67394788-67394807 None:intergenic 50.0%
TGATGGAACTTGGGCAGTAG+TGG - chr2_1:67394844-67394863 Msa0219660:CDS 50.0%
CTTGATCTGGCAGAAGGACT+AGG + chr2_1:67394893-67394912 None:intergenic 50.0%
ATTCCCACAGTCGATGTTGG+CGG - chr2_1:67395229-67395248 Msa0219660:intron 50.0%
! ATACCGCCAACATCGACTGT+GGG + chr2_1:67395235-67395254 None:intergenic 50.0%
CACACGTGGACAACACTTTC+AGG - chr2_1:67395449-67395468 Msa0219660:CDS 50.0%
TGGACAACACTTTCAGGCAC+AGG - chr2_1:67395455-67395474 Msa0219660:CDS 50.0%
! GCACAGGAGCTGATGATGTA+AGG - chr2_1:67395471-67395490 Msa0219660:CDS 50.0%
! CGTAAGAGTGTAGATGACCC+AGG - chr2_1:67395503-67395522 Msa0219660:CDS 50.0%
GCACTTAGAACAATGCCAGC+TGG + chr2_1:67395533-67395552 None:intergenic 50.0%
GGACAACTCCACCATTGGAA+AGG + chr2_1:67396367-67396386 None:intergenic 50.0%
! TTTGGTGTGGTTGTCCCATC+TGG + chr2_1:67396941-67396960 None:intergenic 50.0%
GATGGGACAACCACACCAAA+TGG - chr2_1:67396941-67396960 Msa0219660:five_prime_UTR 50.0%
! ACCACACCAAATGGAGGTGT+TGG - chr2_1:67396950-67396969 Msa0219660:five_prime_UTR 50.0%
! ACCAACACCTCCATTTGGTG+TGG + chr2_1:67396954-67396973 None:intergenic 50.0%
!! GGTGTTGGTGAAACTGGACA+TGG - chr2_1:67396965-67396984 Msa0219660:five_prime_UTR 50.0%
! GTTGGTGAAACTGGACATGG+TGG - chr2_1:67396968-67396987 Msa0219660:five_prime_UTR 50.0%
!! CTCAGTTGGTCGTTCTGAGA+AGG + chr2_1:67397374-67397393 None:intergenic 50.0%
CTTCTCAGAACGACCAACTG+AGG - chr2_1:67397372-67397391 Msa0219660:intron 50.0%
GCACCGTGCAACTGTTGTAG+GGG + chr2_1:67393640-67393659 None:intergenic 55.0%
CTGCACCGTGCAACTGTTGT+AGG + chr2_1:67393642-67393661 None:intergenic 55.0%
CGGTGCAGCAACCCTAATGT+AGG - chr2_1:67393654-67393673 Msa0219660:intron 55.0%
GCCATTGCTGCCAAGTACGT+AGG - chr2_1:67394003-67394022 Msa0219660:CDS 55.0%
GCGAGGAGGAACTGATGAAG+GGG + chr2_1:67394058-67394077 None:intergenic 55.0%
GGCGAGGAGGAACTGATGAA+GGG + chr2_1:67394059-67394078 None:intergenic 55.0%
! CCACCAATGCCGAGTTCTAG+AGG + chr2_1:67394081-67394100 None:intergenic 55.0%
!! CCTCTAGAACTCGGCATTGG+TGG - chr2_1:67394078-67394097 Msa0219660:CDS 55.0%
GGAGGACAACCAGGAATTGG+AGG - chr2_1:67394105-67394124 Msa0219660:CDS 55.0%
GCTAGCTGTTGCTGCTATGG+AGG - chr2_1:67394203-67394222 Msa0219660:intron 55.0%
!! GGAAGTGCTATCAACTGGGG+TGG - chr2_1:67394604-67394623 Msa0219660:CDS 55.0%
TGCTATCAACTGGGGTGGCA+GGG - chr2_1:67394609-67394628 Msa0219660:CDS 55.0%
! GATACCGCCAACATCGACTG+TGG + chr2_1:67395236-67395255 None:intergenic 55.0%
! TGTCCACGTGTGTGCTGTTG+AGG + chr2_1:67395441-67395460 None:intergenic 55.0%
!! CAATGCCAGCTGGTCTTCCT+GGG + chr2_1:67395523-67395542 None:intergenic 55.0%
!! ACAATGCCAGCTGGTCTTCC+TGG + chr2_1:67395524-67395543 None:intergenic 55.0%
GGGACAACCACACCAAATGG+AGG - chr2_1:67396944-67396963 Msa0219660:five_prime_UTR 55.0%
GGTGAAACTGGACATGGTGG+TGG - chr2_1:67396971-67396990 Msa0219660:five_prime_UTR 55.0%
ACGACCAACTGAGGACTGAG+AGG - chr2_1:67397381-67397400 Msa0219660:intron 55.0%
GGGCGAGGAGGAACTGATGA+AGG + chr2_1:67394060-67394079 None:intergenic 60.0%
!! CCTCCTCGCCCTCTAGAACT+CGG - chr2_1:67394069-67394088 Msa0219660:CDS 60.0%
!! ATGCCGAGTTCTAGAGGGCG+AGG + chr2_1:67394075-67394094 None:intergenic 60.0%
!! CGCCCTCTAGAACTCGGCAT+TGG - chr2_1:67394075-67394094 Msa0219660:CDS 60.0%
!! CTCGGCATTGGTGGTTTCGG+AGG - chr2_1:67394087-67394106 Msa0219660:CDS 60.0%
GGTGGTTTCGGAGGACAACC+AGG - chr2_1:67394096-67394115 Msa0219660:CDS 60.0%
GTGCTATCAACTGGGGTGGC+AGG - chr2_1:67394608-67394627 Msa0219660:CDS 60.0%
GGGGTGGCAGGGAACTACAA+TGG - chr2_1:67394620-67394639 Msa0219660:CDS 60.0%
GTGCCTCAACAGCACACACG+TGG - chr2_1:67395435-67395454 Msa0219660:CDS 60.0%
GATGACCCAGGAAGACCAGC+TGG - chr2_1:67395515-67395534 Msa0219660:CDS 60.0%
!! CCGAGTTCTAGAGGGCGAGG+AGG + chr2_1:67394072-67394091 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 67391101 67397820 67391101 ID=Msa0219660;Name=Msa0219660
chr2_1 mRNA 67391101 67397820 67391101 ID=Msa0219660-mRNA-1;Parent=Msa0219660;Name=Msa0219660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=677|1|1|1|0.75|0.69|13|580|737
chr2_1 exon 67391101 67391663 67391101 ID=Msa0219660-mRNA-1:exon:19091;Parent=Msa0219660-mRNA-1
chr2_1 exon 67391766 67392151 67391766 ID=Msa0219660-mRNA-1:exon:19090;Parent=Msa0219660-mRNA-1
chr2_1 exon 67392470 67392565 67392470 ID=Msa0219660-mRNA-1:exon:19089;Parent=Msa0219660-mRNA-1
chr2_1 exon 67393293 67393564 67393293 ID=Msa0219660-mRNA-1:exon:19088;Parent=Msa0219660-mRNA-1
chr2_1 exon 67393671 67393845 67393671 ID=Msa0219660-mRNA-1:exon:19087;Parent=Msa0219660-mRNA-1
chr2_1 exon 67393957 67394157 67393957 ID=Msa0219660-mRNA-1:exon:19086;Parent=Msa0219660-mRNA-1
chr2_1 exon 67394266 67394367 67394266 ID=Msa0219660-mRNA-1:exon:19085;Parent=Msa0219660-mRNA-1
chr2_1 exon 67394493 67394933 67394493 ID=Msa0219660-mRNA-1:exon:19084;Parent=Msa0219660-mRNA-1
chr2_1 exon 67395422 67395610 67395422 ID=Msa0219660-mRNA-1:exon:19083;Parent=Msa0219660-mRNA-1
chr2_1 exon 67395707 67395824 67395707 ID=Msa0219660-mRNA-1:exon:19082;Parent=Msa0219660-mRNA-1
chr2_1 exon 67395967 67396260 67395967 ID=Msa0219660-mRNA-1:exon:19081;Parent=Msa0219660-mRNA-1
chr2_1 exon 67396749 67397010 67396749 ID=Msa0219660-mRNA-1:exon:19080;Parent=Msa0219660-mRNA-1
chr2_1 exon 67397449 67397820 67397449 ID=Msa0219660-mRNA-1:exon:19079;Parent=Msa0219660-mRNA-1
chr2_1 five_prime_UTR 67397449 67397820 67397449 ID=Msa0219660-mRNA-1:five_prime_utr;Parent=Msa0219660-mRNA-1
chr2_1 five_prime_UTR 67396749 67397010 67396749 ID=Msa0219660-mRNA-1:five_prime_utr;Parent=Msa0219660-mRNA-1
chr2_1 five_prime_UTR 67396218 67396260 67396218 ID=Msa0219660-mRNA-1:five_prime_utr;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67395967 67396217 67395967 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67395707 67395824 67395707 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67395422 67395610 67395422 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67394493 67394933 67394493 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67394266 67394367 67394266 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67393957 67394157 67393957 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67393671 67393845 67393671 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67393293 67393564 67393293 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67392470 67392565 67392470 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 CDS 67391783 67392151 67391783 ID=Msa0219660-mRNA-1:cds;Parent=Msa0219660-mRNA-1
chr2_1 three_prime_UTR 67391766 67391782 67391766 ID=Msa0219660-mRNA-1:three_prime_utr;Parent=Msa0219660-mRNA-1
chr2_1 three_prime_UTR 67391101 67391663 67391101 ID=Msa0219660-mRNA-1:three_prime_utr;Parent=Msa0219660-mRNA-1
Gene Sequence

>Msa0219660

ATGTTCCAGCCAAATCTAATGGAAGCTGGACAACATCATCAACTTCTGCCATTTGACATGACACAAAACAACAACAACACTTCAGAAAGTGATGTTCCAAGAATCCGTGAAGATGAATTATTCGACAGTGCTACAAAATCTGGTAACAGTGAAAATCAAGAAGCTGCTAATTCTGGTGAAGATCAAGAGCCTCGTGCTAAGAAGAAACGTTATCACCGTCATACACAGCATCAGATCCAAGAAATGGAAGCGTTTTTTAAGGAATGTCCACACCCTGATGACAAGCAAAGGAAGGAACTAAGCAGAGAGTTAGGGTTAGAGCCATTACAAGTGAAGTTTTGGTTTCAGAACAAACGTACTCAAATGAAGACTCAACAAGAGAGGCATGAGAATACTTCACTTAGAACTGAGAATGAGAAACTTCGTGCCGATAACATGAGGTTTAGAGAAGCTCTAAGTAATGCTTCTTGTCCTAATTGTGGTGGACCAACTGCTATCGGAGAAATGTCTTTCGATGAACATCACTTGAGGATTGAAAATTCTCGCCTAAGAGAAGAGATTGATAGGATATCTGCCATTGCTGCCAAGTACGTAGGAAAGCCAGTGGTGAGCTATCCACTACTCTCCCCTTCATCAGTTCCTCCTCGCCCTCTAGAACTCGGCATTGGTGGTTTCGGAGGACAACCAGGAATTGGAGGAGATATGTATGGAGCTGGAGATCTTCTTAGATCAATAAGTGGACCTACTGAAGCTGATAAACCAATGATAATTGAGCTAGCTGTTGCTGCTATGGAGGAACTCATTGGAATGGCACAAATGGGTGATCCACTTTGGTTGCCTACACTTGAAGGAGGTTCCATACTCAATGAAGAGGAATATGTTAGGTCTTTTCCTAGAGGAATTGGTCCAAAACCAGCTGGTTTTAAGTGTGAAGCTTCAAGAGAATCTTCTGTTGTCATCATGAATCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAGTTTTCTCTGGCATTGTCTCAAGAGCAATGACACTGGAAGTGCTATCAACTGGGGTGGCAGGGAACTACAATGGTGCATTACAAGTGATGACAGCAGAACTACAAGTACCTTCACCACTTGTGCCAACTAGAGAAAGTTATTTTGTAAGGTATTGTAAGCAACATGCTGATGGAACTTGGGCAGTAGTGGATGTTTCTTTGGACAATTTACGCCCTAGTCCTTCTGCCAGATCAAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCAAAGGTTATATGGGTTGAGCACGTTGAAGTGGATGATAGAGGTGTTCATAATCTATACAAGCATCTTGTTAGTTCTGGACATGCATTTGGCGCAAAACGTTGGATCGCAACCTTAGATCGACAATGTGAAAGACTTGCTAGTGCCATGGCAACAAACATTCCCACAGTCGATGTTGGCGTGATAACAAACCAAGATGGGAGAAAGAGTATGTTGAAACTAGCTGAAAGAATGTGCATAAGCTTCTGTGCTGGAGTGAGTGCCTCAACAGCACACACGTGGACAACACTTTCAGGCACAGGAGCTGATGATGTAAGGGTCATGACCCGTAAGAGTGTAGATGACCCAGGAAGACCAGCTGGCATTGTTCTAAGTGCTGCAACTTCTTTTTGGCTTCCAGTGCCACCAAAAAGAGTTTTTGAATTTCTTAGAGATGAAAACTCAAGAAGTGAGTGGGATATCCTTTCCAATGGTGGAGTTGTCCAAGAAATGGCACATATTGCTAATGGAAGAGATACTGGAAATTGTGTTTCTCTACTTCGAGTGAATAGTGCAAATTCAAGCCAAAGCAACATGTTGATATTACAAGAGAGTTGTACGGATTCAACAGGATCATTTGTGATATATGCACCTGTAGACATAGTTGCAATGAATGTGGTTCTAAATGGAGGGGATCCAGATTATGTAGCACTTCTTCCATCTGGATTTGCTATACTTCCAGATGGGACAACCACACCAAATGGAGGTGTTGGTGAAACTGGACATGGTGGTGGATCTCTTTTGACTGTTGCATTTCAAATATTGGTTGATTCGGTTCCAACGGCAAAACTTTCTCTTGGTTCGGTTGCTACGGTTAATAATCTTATTGCTTGTACTGTTGAGAGGATTAAGGCTTCTTTGTCTGGTGAAGTTGCTTGA
Protein sequence

>Msa0219660

MFQPNLMEAGQHHQLLPFDMTQNNNNTSESDVPRIREDELFDSATKSGNSENQEAANSGEDQEPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGGFGGQPGIGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLWLPTLEGGSILNEEEYVRSFPRGIGPKPAGFKCEASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKHLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGRKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTTPNGGVGETGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA*