Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042100 | KAF5947646.1 | 84.211 | 323 | 36 | 2 | 35 | 356 | 44 | 352 | 7.34e-156 | 452 |
| Msa1042100 | KAF5947646.1 | 87.333 | 150 | 18 | 1 | 31 | 179 | 203 | 352 | 8.56e-70 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042100 | sp|O65743|RL24_CICAR | 96.319 | 163 | 5 | 1 | 31 | 192 | 1 | 163 | 3.28e-107 | 314 |
| Msa1042100 | sp|O65743|RL24_CICAR | 95.706 | 163 | 6 | 1 | 208 | 369 | 1 | 163 | 8.85e-107 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042100 | A0A7J7H784 | 84.211 | 323 | 36 | 2 | 35 | 356 | 44 | 352 | 3.51e-156 | 452 |
| Msa1042100 | A0A7J7H784 | 87.333 | 150 | 18 | 1 | 31 | 179 | 203 | 352 | 4.09e-70 | 233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027590 | Msa1042100 | 0.862986 | 3.434596e-64 | -8.615850e-47 |
| Msa0042480 | Msa1042100 | 0.847336 | 1.233308e-59 | -8.615850e-47 |
| Msa0070840 | Msa1042100 | 0.842531 | 2.442508e-58 | -8.615850e-47 |
| Msa0075350 | Msa1042100 | 0.865726 | 4.792714e-65 | -8.615850e-47 |
| Msa0079590 | Msa1042100 | 0.850193 | 1.989648e-60 | -8.615850e-47 |
| Msa0705800 | Msa1042100 | 0.838210 | 3.292079e-57 | -8.615850e-47 |
| Msa0712610 | Msa1042100 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0758420 | Msa1042100 | 0.810895 | 9.180900e-51 | -8.615850e-47 |
| Msa0788380 | Msa1042100 | 0.863820 | 1.894634e-64 | -8.615850e-47 |
| Msa0822580 | Msa1042100 | 0.809972 | 1.452764e-50 | -8.615850e-47 |
| Msa0838070 | Msa1042100 | 0.863393 | 2.570608e-64 | -8.615850e-47 |
| Msa0128330 | Msa1042100 | 0.801858 | 7.382243e-49 | -8.615850e-47 |
| Msa0168320 | Msa1042100 | 0.828031 | 1.126725e-54 | -8.615850e-47 |
| Msa0191450 | Msa1042100 | 0.846055 | 2.761164e-59 | -8.615850e-47 |
| Msa0191550 | Msa1042100 | 0.818085 | 2.355721e-52 | -8.615850e-47 |
| Msa0192750 | Msa1042100 | 0.815423 | 9.316782e-52 | -8.615850e-47 |
| Msa0194940 | Msa1042100 | 0.800382 | 1.479302e-48 | -8.615850e-47 |
| Msa0210360 | Msa1042100 | 0.825138 | 5.518762e-54 | -8.615850e-47 |
| Msa0369410 | Msa1042100 | 0.828415 | 9.103869e-55 | -8.615850e-47 |
| Msa0426090 | Msa1042100 | 0.844719 | 6.351409e-59 | -8.615850e-47 |
| Msa0426250 | Msa1042100 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0463520 | Msa1042100 | 0.817843 | 2.671537e-52 | -8.615850e-47 |
| Msa0472480 | Msa1042100 | 0.850749 | 1.388182e-60 | -8.615850e-47 |
| Msa0475810 | Msa1042100 | 0.802016 | 6.852390e-49 | -8.615850e-47 |
| Msa0481520 | Msa1042100 | 0.846888 | 1.636669e-59 | -8.615850e-47 |
| Msa1037290 | Msa1042100 | 0.853335 | 2.557890e-61 | -8.615850e-47 |
| Msa1040160 | Msa1042100 | 0.807391 | 5.171328e-50 | -8.615850e-47 |
| Msa1041680 | Msa1042100 | 0.861577 | 9.305178e-64 | -8.615850e-47 |
| Msa1042100 | Msa1082170 | 0.848178 | 7.234546e-60 | -8.615850e-47 |
| Msa1042100 | Msa1083370 | 0.804093 | 2.549073e-49 | -8.615850e-47 |
| Msa1042100 | Msa1126520 | 0.856414 | 3.268986e-62 | -8.615850e-47 |
| Msa1042100 | Msa1164150 | 0.853341 | 2.547274e-61 | -8.615850e-47 |
| Msa1042100 | Msa1166570 | 0.869631 | 2.678953e-66 | -8.615850e-47 |
| Msa1042100 | Msa1180000 | 0.841138 | 5.697277e-58 | -8.615850e-47 |
| Msa1042100 | Msa1186030 | 0.808359 | 3.220378e-50 | -8.615850e-47 |
| Msa1042100 | Msa1240270 | 0.832083 | 1.157299e-55 | -8.615850e-47 |
| Msa1042100 | Msa1270640 | 0.837577 | 4.789421e-57 | -8.615850e-47 |
| Msa1042100 | Msa1270710 | 0.836442 | 9.336370e-57 | -8.615850e-47 |
| Msa1042100 | Msa1311400 | 0.809895 | 1.509150e-50 | -8.615850e-47 |
| Msa1042100 | Msa1368920 | 0.853273 | 2.664270e-61 | -8.615850e-47 |
| Msa1042100 | Msa1392590 | 0.806194 | 9.261917e-50 | -8.615850e-47 |
| Msa1042100 | Msa1406080 | 0.804309 | 2.297685e-49 | -8.615850e-47 |
| Msa1042100 | Msa1449160 | 0.802937 | 4.426857e-49 | -8.615850e-47 |
| Msa1042100 | Msa1463570 | 0.808571 | 2.900587e-50 | -8.615850e-47 |
| Msa0297830 | Msa1042100 | 0.802709 | 4.933684e-49 | -8.615850e-47 |
| Msa0301220 | Msa1042100 | 0.806845 | 6.750353e-50 | -8.615850e-47 |
| Msa0335840 | Msa1042100 | 0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0573500 | Msa1042100 | 0.800913 | 1.153223e-48 | -8.615850e-47 |
| Msa0573550 | Msa1042100 | 0.805775 | 1.134080e-49 | -8.615850e-47 |
| Msa0582070 | Msa1042100 | 0.810595 | 1.065908e-50 | -8.615850e-47 |
| Msa0582320 | Msa1042100 | 0.813561 | 2.404632e-51 | -8.615850e-47 |
| Msa0596370 | Msa1042100 | 0.820823 | 5.594282e-53 | -8.615850e-47 |
| Msa0597240 | Msa1042100 | 0.850384 | 1.758278e-60 | -8.615850e-47 |
| Msa0966670 | Msa1042100 | 0.806979 | 6.321640e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042100 | MtrunA17_Chr7g0265501 | 100.000 | 163 | 0 | 0 | 31 | 193 | 1 | 163 | 4.69e-114 | 328 |
| Msa1042100 | MtrunA17_Chr7g0265501 | 99.387 | 163 | 1 | 0 | 208 | 370 | 1 | 163 | 1.34e-113 | 327 |
| Msa1042100 | MtrunA17_Chr7g0265491 | 100.000 | 163 | 0 | 0 | 31 | 193 | 1 | 163 | 4.69e-114 | 328 |
| Msa1042100 | MtrunA17_Chr7g0265491 | 99.387 | 163 | 1 | 0 | 208 | 370 | 1 | 163 | 1.34e-113 | 327 |
| Msa1042100 | MtrunA17_Chr1g0179601 | 95.333 | 150 | 6 | 1 | 31 | 179 | 1 | 150 | 6.54e-87 | 259 |
| Msa1042100 | MtrunA17_Chr1g0179601 | 94.667 | 150 | 7 | 1 | 208 | 356 | 1 | 150 | 1.96e-86 | 258 |
| Msa1042100 | MtrunA17_Chr4g0027111 | 37.895 | 95 | 57 | 1 | 210 | 302 | 1 | 95 | 3.37e-17 | 78.2 |
| Msa1042100 | MtrunA17_Chr4g0027111 | 36.842 | 95 | 58 | 1 | 33 | 125 | 1 | 95 | 9.08e-17 | 77.0 |
| Msa1042100 | MtrunA17_Chr4g0058481 | 87.805 | 41 | 4 | 1 | 86 | 126 | 1 | 40 | 1.82e-15 | 69.7 |
| Msa1042100 | MtrunA17_Chr4g0058481 | 87.805 | 41 | 4 | 1 | 263 | 303 | 1 | 40 | 1.82e-15 | 69.7 |
| Msa1042100 | MtrunA17_Chr2g0321011 | 35.484 | 93 | 58 | 1 | 210 | 300 | 1 | 93 | 6.56e-14 | 68.9 |
| Msa1042100 | MtrunA17_Chr2g0321011 | 34.409 | 93 | 59 | 1 | 33 | 123 | 1 | 93 | 1.64e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042100 | AT2G36620.1 | 89.172 | 157 | 16 | 1 | 208 | 363 | 1 | 157 | 1.33e-85 | 256 |
| Msa1042100 | AT2G36620.1 | 89.172 | 157 | 16 | 1 | 31 | 186 | 1 | 157 | 1.86e-85 | 256 |
| Msa1042100 | AT3G53020.1 | 89.933 | 149 | 14 | 1 | 208 | 356 | 1 | 148 | 8.43e-81 | 244 |
| Msa1042100 | AT3G53020.1 | 89.933 | 149 | 14 | 1 | 31 | 179 | 1 | 148 | 1.25e-80 | 244 |
| Msa1042100 | AT2G44860.2 | 37.500 | 128 | 67 | 5 | 210 | 333 | 1 | 119 | 1.33e-16 | 77.0 |
| Msa1042100 | AT2G44860.2 | 36.719 | 128 | 68 | 5 | 33 | 156 | 1 | 119 | 3.51e-16 | 75.9 |
| Msa1042100 | AT2G44860.1 | 37.500 | 128 | 67 | 5 | 210 | 333 | 1 | 119 | 1.33e-16 | 77.0 |
| Msa1042100 | AT2G44860.1 | 36.719 | 128 | 68 | 5 | 33 | 156 | 1 | 119 | 3.51e-16 | 75.9 |
Find 124 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAAAATCAATTTAATATC+TGG | 0.154677 | 7_1:-79857150 | None:intergenic |
| AGATGCTACTTCGGCTTTCT+TGG | 0.236901 | 7_1:-79852128 | None:intergenic |
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7_1:-79856910 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7_1:+79852205 | Msa1042100:CDS |
| CCTAAAATGGGCGGTGGTGG+CGG | 0.273790 | 7_1:+79856987 | Msa1042100:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7_1:+79852192 | Msa1042100:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7_1:+79856974 | Msa1042100:CDS |
| CTTGGCTTTCTTCTCATCCT+TGG | 0.290844 | 7_1:-79852110 | None:intergenic |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7_1:-79851845 | None:intergenic |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7_1:-79856551 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7_1:-79851488 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7_1:-79856194 | None:intergenic |
| TGATAAAACAGTAACATAAA+AGG | 0.351434 | 7_1:-79857099 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7_1:-79851782 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7_1:-79856488 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7_1:-79851466 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7_1:-79856172 | None:intergenic |
| GAAAGCCGAAGTAGCATCTA+AGG | 0.360444 | 7_1:+79852132 | Msa1042100:CDS |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7_1:+79856914 | Msa1042100:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_1:-79851235 | None:intergenic |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_1:-79855939 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7_1:+79852145 | Msa1042100:CDS |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7_1:+79856927 | Msa1042100:CDS |
| CTAAAATGGGCGGTGGTGGC+GGG | 0.411135 | 7_1:+79856988 | Msa1042100:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7_1:-79851790 | None:intergenic |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7_1:-79856496 | None:intergenic |
| ATAGACCGGGTTATTTCAAA+TGG | 0.414383 | 7_1:+79850437 | Msa1042100:CDS |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.415686 | 7_1:+79856984 | Msa1042100:CDS |
| ATCAAGCAAACAAAATATAT+CGG | 0.421334 | 7_1:-79857073 | None:intergenic |
| TTCAACTTTCCTACTAATCC+TGG | 0.426318 | 7_1:+79857335 | Msa1042100:three_prime_UTR |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_1:+79851252 | Msa1042100:CDS |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_1:+79855956 | Msa1042100:CDS |
| GCAAAATCAATTTAATATCT+GGG | 0.429649 | 7_1:-79857149 | None:intergenic |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7_1:-79851854 | None:intergenic |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7_1:-79856560 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7_1:+79852202 | Msa1042100:CDS |
| TTGAAAGAACCAGGATTAGT+AGG | 0.447511 | 7_1:-79857344 | None:intergenic |
| GTCAGTACTTGGCACTTGTT+CGG | 0.456719 | 7_1:+79857252 | Msa1042100:three_prime_UTR |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7_1:+79851422 | Msa1042100:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7_1:+79856128 | Msa1042100:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7_1:+79855927 | Msa1042100:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7_1:-79851450 | None:intergenic |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7_1:-79856156 | None:intergenic |
| GCAAAGATTTACCCAGGAAG+AGG | 0.473275 | 7_1:+79851223 | Msa1042100:CDS |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7_1:+79852193 | Msa1042100:CDS |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7_1:+79856975 | Msa1042100:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7_1:+79851869 | Msa1042100:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7_1:+79856575 | Msa1042100:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7_1:+79851790 | Msa1042100:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7_1:+79856496 | Msa1042100:CDS |
| TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7_1:+79856854 | Msa1042100:intron |
| TCAATCCCGCAGTGAAATCA+AGG | 0.506619 | 7_1:+79852072 | Msa1042100:intron |
| AAATACAAATGAATATAGAC+CGG | 0.508914 | 7_1:+79850423 | None:intergenic |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7_1:-79851853 | None:intergenic |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7_1:-79856559 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7_1:+79852206 | Msa1042100:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7_1:+79851854 | Msa1042100:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7_1:+79856560 | Msa1042100:CDS |
| CTCAAGAAGCGGTGAAGAAG+AGG | 0.534219 | 7_1:+79851749 | Msa1042100:CDS |
| CTCAAGAAGCGGTGAAGAAG+AGG | 0.534219 | 7_1:+79856455 | Msa1042100:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7_1:+79851855 | Msa1042100:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7_1:+79856561 | Msa1042100:CDS |
| TTGTGCCTTAGATGCTACTT+CGG | 0.538791 | 7_1:-79852137 | None:intergenic |
| AGGGAAAGGCAATGTTCAGA+AGG | 0.551183 | 7_1:+79852165 | Msa1042100:CDS |
| TAGACCGGGTTATTTCAAAT+GGG | 0.552305 | 7_1:+79850438 | Msa1042100:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7_1:-79851779 | None:intergenic |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7_1:-79856485 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_1:-79851234 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_1:-79855938 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7_1:+79851461 | Msa1042100:CDS |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7_1:+79856167 | Msa1042100:CDS |
| CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_1:+79850554 | Msa1042100:CDS |
| CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_1:+79855321 | Msa1042100:CDS |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7_1:-79856919 | None:intergenic |
| CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_1:-79850554 | None:intergenic |
| CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_1:-79855321 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7_1:+79856947 | Msa1042100:CDS |
| TGGCTGCTTCGTTGATGTGG+TGG | 0.577916 | 7_1:-79850551 | None:intergenic |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7_1:-79851803 | None:intergenic |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7_1:-79856509 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7_1:+79852199 | Msa1042100:CDS |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7_1:+79856981 | Msa1042100:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7_1:+79852180 | Msa1042100:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7_1:+79856962 | Msa1042100:CDS |
| ATTCTGAACTTGAAAGAACC+AGG | 0.593565 | 7_1:-79857353 | None:intergenic |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7_1:+79856932 | Msa1042100:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_1:+79851224 | Msa1042100:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_1:+79855928 | Msa1042100:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_1:+79851199 | Msa1042100:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_1:+79855903 | Msa1042100:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7_1:+79851779 | Msa1042100:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7_1:+79856485 | Msa1042100:CDS |
| TGGCTGCTTCGTTGATGTGG+TGG | 0.600894 | 7_1:-79855318 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+AGG | 0.600921 | 7_1:+79852151 | Msa1042100:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7_1:+79852181 | Msa1042100:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7_1:+79856963 | Msa1042100:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_1:-79850571 | None:intergenic |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_1:-79855338 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7_1:-79851774 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7_1:-79856480 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7_1:+79852146 | Msa1042100:CDS |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7_1:+79856928 | Msa1042100:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7_1:-79851797 | None:intergenic |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7_1:-79856503 | None:intergenic |
| TGGGCCCATTTGAAATAACC+CGG | 0.618483 | 7_1:-79850442 | None:intergenic |
| AATACAAATGAATATAGACC+GGG | 0.621739 | 7_1:+79850424 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7_1:+79856933 | Msa1042100:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7_1:+79855921 | Msa1042100:CDS |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7_1:+79851837 | Msa1042100:CDS |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7_1:+79856543 | Msa1042100:CDS |
| AGTGGCGCAAAGATTTACCC+AGG | 0.643624 | 7_1:+79851217 | Msa1042100:CDS |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7_1:+79851492 | Msa1042100:CDS |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7_1:+79856198 | Msa1042100:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7_1:+79852196 | Msa1042100:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7_1:+79856978 | Msa1042100:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7_1:+79856948 | Msa1042100:CDS |
| GGGAAAGGCAATGTTCAGAA+GGG | 0.656870 | 7_1:+79852166 | Msa1042100:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.663218 | 7_1:+79851738 | Msa1042100:intron |
| GCAGGACATTGCTCAAGAAG+CGG | 0.663218 | 7_1:+79856444 | Msa1042100:intron |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7_1:+79856902 | Msa1042100:CDS |
| CCCGCAGTGAAATCAAGGAG+AGG | 0.678239 | 7_1:+79852077 | Msa1042100:intron |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7_1:+79852093 | Msa1042100:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7_1:+79856875 | Msa1042100:CDS |
| CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7_1:+79856859 | Msa1042100:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+CGG | + | chr7_1:79856634-79856653 | Msa1042100:intron | 0.0% |
| !! | AAAATATATATTAAGTCATT+CGG | - | chr7_1:79853590-79853609 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTATTGTTTTTAC+AGG | + | chr7_1:79856096-79856115 | Msa1042100:intron | 10.0% |
| !!! | CTTTTGATATTAGTTTTTTA+GGG | + | chr7_1:79850508-79850527 | Msa1042100:intron | 15.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7_1:79851364-79851383 | Msa1042100:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7_1:79851390-79851409 | Msa1042100:intron | 15.0% |
| !! | GAAAACAAATTATATTTAGA+TGG | - | chr7_1:79852260-79852279 | None:intergenic | 15.0% |
| !! | ATATTTGTAATGATCTATAA+TGG | - | chr7_1:79853184-79853203 | None:intergenic | 15.0% |
| !! | TTATTTACGAAATCAAATAA+GGG | - | chr7_1:79853226-79853245 | None:intergenic | 15.0% |
| !! | ATTATTTACGAAATCAAATA+AGG | - | chr7_1:79853227-79853246 | None:intergenic | 15.0% |
| !! | TAAATTAAAAAATACACAAG+TGG | + | chr7_1:79853268-79853287 | Msa1042100:intron | 15.0% |
| !!! | ATTTGTCATTTATATATCTT+AGG | - | chr7_1:79853737-79853756 | None:intergenic | 15.0% |
| !!! | TTTAAAACTATGATTGTAAA+AGG | + | chr7_1:79854148-79854167 | Msa1042100:intron | 15.0% |
| !! | TTAAAACTATGATTGTAAAA+GGG | + | chr7_1:79854149-79854168 | Msa1042100:intron | 15.0% |
| !!! | TCAAAATTGCTATTTTTTTA+AGG | + | chr7_1:79854186-79854205 | Msa1042100:intron | 15.0% |
| !!! | TATAAAAAACTTACCAATTT+TGG | - | chr7_1:79854251-79854270 | None:intergenic | 15.0% |
| !!! | TTGGTAAGTTTTTTATAAAA+AGG | + | chr7_1:79854254-79854273 | Msa1042100:intron | 15.0% |
| !!! | TTTAAATAGAAATTTTGTCT+TGG | - | chr7_1:79854320-79854339 | None:intergenic | 15.0% |
| !!! | TTTTGACTCTATTAAAAAAA+AGG | - | chr7_1:79854383-79854402 | None:intergenic | 15.0% |
| !! | AAAAACTTTAACTAAAGAAT+TGG | + | chr7_1:79854770-79854789 | Msa1042100:intron | 15.0% |
| !! | AAATTGATAAAACTATTGAA+AGG | - | chr7_1:79854939-79854958 | None:intergenic | 15.0% |
| !! | AATTTCGACAAAATATTATA+TGG | - | chr7_1:79854984-79855003 | None:intergenic | 15.0% |
| !!! | TGTCAGTTTTATTTATTTTT+TGG | + | chr7_1:79855007-79855026 | Msa1042100:intron | 15.0% |
| !!! | TTTTATTTATTTTTTGGTAC+AGG | + | chr7_1:79855013-79855032 | Msa1042100:intron | 15.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | + | chr7_1:79855491-79855510 | Msa1042100:intron | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | - | chr7_1:79855673-79855692 | None:intergenic | 15.0% |
| !!! | ATTTTAATGGTAACAAAAAA+TGG | - | chr7_1:79857029-79857048 | None:intergenic | 15.0% |
| !!! | GAAAACAAACTATATTTTAA+TGG | - | chr7_1:79857042-79857061 | None:intergenic | 15.0% |
| !!! | GCTTTTGATATTAGTTTTTT+AGG | + | chr7_1:79850507-79850526 | Msa1042100:intron | 20.0% |
| !! | TATTGTATTTGAGAATTTGA+TGG | + | chr7_1:79850703-79850722 | Msa1042100:intron | 20.0% |
| !! | TTTGATGGAATGTAAAATTT+CGG | + | chr7_1:79850718-79850737 | Msa1042100:intron | 20.0% |
| !!! | CAAAATTCTAAAAATCTGTT+TGG | + | chr7_1:79850789-79850808 | Msa1042100:intron | 20.0% |
| !!! | TGGAAATTTAGATATGTTTT+TGG | + | chr7_1:79850934-79850953 | Msa1042100:intron | 20.0% |
| !!! | CAATTTCAATTTTTAATGAG+TGG | + | chr7_1:79850973-79850992 | Msa1042100:intron | 20.0% |
| !! | TCTTTAAATTAGCTATTAGA+AGG | + | chr7_1:79851019-79851038 | Msa1042100:intron | 20.0% |
| !!! | TTGTATTTTGATTGAATTAG+TGG | + | chr7_1:79851112-79851131 | Msa1042100:intron | 20.0% |
| !!! | TGTATTTTGATTGAATTAGT+GGG | + | chr7_1:79851113-79851132 | Msa1042100:intron | 20.0% |
| !! | TGATAAAACAGTAACATAAA+AGG | - | chr7_1:79852320-79852339 | None:intergenic | 20.0% |
| !!! | TGTTTTATCAAACTTATGTT+TGG | + | chr7_1:79852330-79852349 | Msa1042100:intron | 20.0% |
| !! | TTACCAACAAAAATAAAAAG+TGG | + | chr7_1:79852693-79852712 | Msa1042100:intron | 20.0% |
| !! | ACACAATATAAATGAATGTT+TGG | - | chr7_1:79852791-79852810 | None:intergenic | 20.0% |
| !! | ATTGATTAATTAAACCTCTA+AGG | + | chr7_1:79852909-79852928 | Msa1042100:intron | 20.0% |
| !! | TATTTACGAAATCAAATAAG+GGG | - | chr7_1:79853225-79853244 | None:intergenic | 20.0% |
| !! | TGATTTCGTAAATAATTATG+TGG | + | chr7_1:79853231-79853250 | Msa1042100:intron | 20.0% |
| !!! | GTAAACATAGTTTTAAAACT+CGG | + | chr7_1:79853351-79853370 | Msa1042100:intron | 20.0% |
| !!! | AACAAGTTTTGTTAAAAAAG+TGG | - | chr7_1:79853937-79853956 | None:intergenic | 20.0% |
| !!! | ACAATCATAGTTTTAAAACT+CGG | - | chr7_1:79854145-79854164 | None:intergenic | 20.0% |
| !! | TAAAACTATGATTGTAAAAG+GGG | + | chr7_1:79854150-79854169 | Msa1042100:intron | 20.0% |
| !! | TTAATTCTACTTATTATACC+TGG | + | chr7_1:79854440-79854459 | Msa1042100:intron | 20.0% |
| !!! | CTTGTTTTATTCTAAAACAA+AGG | - | chr7_1:79854623-79854642 | None:intergenic | 20.0% |
| !!! | TTGACAAACAAAAAGTTTTA+TGG | - | chr7_1:79855088-79855107 | None:intergenic | 20.0% |
| !! | AATACTCATCCATAATTATT+TGG | + | chr7_1:79855138-79855157 | Msa1042100:intron | 20.0% |
| !! | ATACTCATCCATAATTATTT+GGG | + | chr7_1:79855139-79855158 | Msa1042100:intron | 20.0% |
| !! | AAGTATAATTCAATATAGAC+CGG | + | chr7_1:79855191-79855210 | Msa1042100:intron | 20.0% |
| !!! | AGCTTTTGATATTAGTTTTT+AGG | + | chr7_1:79850506-79850525 | Msa1042100:intron | 20.0% |
| !!! | GCTTTTGATATTAGTTTTTA+GGG | + | chr7_1:79855275-79855294 | Msa1042100:intron | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | - | chr7_1:79855586-79855605 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | - | chr7_1:79855587-79855606 | None:intergenic | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | + | chr7_1:79855639-79855658 | Msa1042100:intron | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | + | chr7_1:79855677-79855696 | Msa1042100:intron | 20.0% |
| !! | ATCAAGCAAACAAAATATAT+CGG | - | chr7_1:79857076-79857095 | None:intergenic | 20.0% |
| !! | TGATAAAACAGTAACATAAA+AGG | - | chr7_1:79852320-79852339 | None:intergenic | 20.0% |
| !!! | TGTTTTATCAAACTTATGTT+TGG | + | chr7_1:79852330-79852349 | Msa1042100:intron | 20.0% |
| !! | GCAAAATCAATTTAATATCT+GGG | - | chr7_1:79857152-79857171 | None:intergenic | 20.0% |
| !! | AGCAAAATCAATTTAATATC+TGG | - | chr7_1:79857153-79857172 | None:intergenic | 20.0% |
| !!! | TGTTTGATTATAAGTTTTAC+TGG | + | chr7_1:79857230-79857249 | Msa1042100:three_prime_UTR | 20.0% |
| !!! | TATATACCCGTTTTTGTATT+GGG | - | chr7_1:79850464-79850483 | None:intergenic | 25.0% |
| !!! | TAAAACTTACTTTAGAACCA+TGG | - | chr7_1:79850574-79850593 | None:intergenic | 25.0% |
| ! | AAAACTGAATGTGTAAATGA+TGG | - | chr7_1:79850612-79850631 | None:intergenic | 25.0% |
| !! | TCATTTACACATTCAGTTTT+AGG | + | chr7_1:79850612-79850631 | Msa1042100:intron | 25.0% |
| !! | CATTTACACATTCAGTTTTA+GGG | + | chr7_1:79850613-79850632 | Msa1042100:intron | 25.0% |
| ! | GATTCATCAACTAAACATTA+CGG | - | chr7_1:79850671-79850690 | None:intergenic | 25.0% |
| ! | ATAATCATAGAACACTGTTT+CGG | - | chr7_1:79850754-79850773 | None:intergenic | 25.0% |
| ! | AAATCAACCAAAGCTATAAT+GGG | - | chr7_1:79850881-79850900 | None:intergenic | 25.0% |
| ! | TAAATCAACCAAAGCTATAA+TGG | - | chr7_1:79850882-79850901 | None:intergenic | 25.0% |
| !! | TTTGCAATTTTTGATGCTAT+TGG | + | chr7_1:79850914-79850933 | Msa1042100:intron | 25.0% |
| ! | CAAAATACAATAACAGTGAA+TGG | - | chr7_1:79851102-79851121 | None:intergenic | 25.0% |
| ! | AGTAGTAAAATTACTAGACA+AGG | - | chr7_1:79851680-79851699 | None:intergenic | 25.0% |
| !!! | GACCTCTTTTTTTTTTTTCA+TGG | + | chr7_1:79851924-79851943 | Msa1042100:intron | 25.0% |
| ! | GTCCATGAAAAAAAAAAAAG+AGG | - | chr7_1:79851929-79851948 | None:intergenic | 25.0% |
| ! | ATCAAGCAAACAAAATATCT+CGG | - | chr7_1:79852294-79852313 | None:intergenic | 25.0% |
| ! | GCAAAATCCATTTAATATCT+GGG | - | chr7_1:79852370-79852389 | None:intergenic | 25.0% |
| ! | AGCAAAATCCATTTAATATC+TGG | - | chr7_1:79852371-79852390 | None:intergenic | 25.0% |
| !!! | TTTTTTAGCACAAAGTTTTG+TGG | + | chr7_1:79852439-79852458 | Msa1042100:intron | 25.0% |
| ! | TCAAATTCTTCAAAACTTGA+TGG | + | chr7_1:79852591-79852610 | Msa1042100:intron | 25.0% |
| !!! | TGACCACTTTTTATTTTTGT+TGG | - | chr7_1:79852699-79852718 | None:intergenic | 25.0% |
| !!! | ATTAATTAAACCTCTAAGGT+AGG | + | chr7_1:79852913-79852932 | Msa1042100:intron | 25.0% |
| !!! | TTGTGTTGGTTAAAACATAA+TGG | + | chr7_1:79853011-79853030 | Msa1042100:intron | 25.0% |
| !! | TTAGTTAGACTCTAAGAATA+TGG | + | chr7_1:79853113-79853132 | Msa1042100:intron | 25.0% |
| !! | TGTCATTTATATATCTTAGG+AGG | - | chr7_1:79853734-79853753 | None:intergenic | 25.0% |
| ! | AAAACTATGATTGTAAAAGG+GGG | + | chr7_1:79854151-79854170 | Msa1042100:intron | 25.0% |
| ! | ATTAGTTAAGCAACCAAAAT+TGG | + | chr7_1:79854235-79854254 | Msa1042100:intron | 25.0% |
| ! | CATCATTGTCAATTTAACTA+TGG | - | chr7_1:79854494-79854513 | None:intergenic | 25.0% |
| ! | TCTTACTACATAACAAACAA+TGG | + | chr7_1:79854530-79854549 | Msa1042100:intron | 25.0% |
| ! | ACCCAAATAAAAAAATTAGC+GGG | - | chr7_1:79854911-79854930 | None:intergenic | 25.0% |
| ! | CACCCAAATAAAAAAATTAG+CGG | - | chr7_1:79854912-79854931 | None:intergenic | 25.0% |
| ! | TACTCATCCATAATTATTTG+GGG | + | chr7_1:79855140-79855159 | Msa1042100:intron | 25.0% |
| ! | AGTATAATTCAATATAGACC+GGG | + | chr7_1:79855192-79855211 | Msa1042100:intron | 25.0% |
| ! | AAACTAATATCAAAAGCTCT+TGG | - | chr7_1:79855272-79855291 | None:intergenic | 25.0% |
| !!! | TAAAACTTACTTTAGAACCA+TGG | - | chr7_1:79850574-79850593 | None:intergenic | 25.0% |
| ! | AAAACTGAATGTGTAAATGA+TGG | - | chr7_1:79850612-79850631 | None:intergenic | 25.0% |
| !! | TCATTTACACATTCAGTTTT+AGG | + | chr7_1:79850612-79850631 | Msa1042100:intron | 25.0% |
| !! | CATTTACACATTCAGTTTTA+GGG | + | chr7_1:79850613-79850632 | Msa1042100:intron | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | - | chr7_1:79855738-79855757 | None:intergenic | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | + | chr7_1:79855759-79855778 | Msa1042100:intron | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | - | chr7_1:79855864-79855883 | None:intergenic | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | - | chr7_1:79855865-79855884 | None:intergenic | 25.0% |
| !! | TTGAATGAATATCAGTTTTG+TGG | + | chr7_1:79851324-79851343 | Msa1042100:intron | 25.0% |
| ! | AGTAGTAAAATTACTAGACA+AGG | - | chr7_1:79851680-79851699 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | + | chr7_1:79856700-79856719 | Msa1042100:intron | 25.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | - | chr7_1:79856764-79856783 | None:intergenic | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | + | chr7_1:79856765-79856784 | Msa1042100:intron | 25.0% |
| !! | CTATATACCCGTTTTTGTAT+TGG | - | chr7_1:79850465-79850484 | None:intergenic | 30.0% |
| TACAAAAACGGGTATATAGA+CGG | + | chr7_1:79850466-79850485 | Msa1042100:intron | 30.0% | |
| AAACTAATATCAAAAGCTCC+AGG | - | chr7_1:79850504-79850523 | None:intergenic | 30.0% | |
| CAGTGTTCTATGATTATTGT+AGG | + | chr7_1:79850757-79850776 | Msa1042100:intron | 30.0% | |
| !! | TGCGTAACTTTTAAGAATGT+TGG | + | chr7_1:79851055-79851074 | Msa1042100:intron | 30.0% |
| ! | TTACTAACTTTTCCACACAA+GGG | - | chr7_1:79851160-79851179 | None:intergenic | 30.0% |
| ! | ATTACTAACTTTTCCACACA+AGG | - | chr7_1:79851161-79851180 | None:intergenic | 30.0% |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7_1:79851252-79851271 | Msa1042100:CDS | 30.0% | |
| GAGATAAAAATGACTCATGT+TGG | + | chr7_1:79851276-79851295 | Msa1042100:intron | 30.0% | |
| !!! | AAATGACTCATGTTGGTTTT+TGG | + | chr7_1:79851283-79851302 | Msa1042100:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7_1:79851420-79851439 | None:intergenic | 30.0% |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7_1:79851422-79851441 | Msa1042100:CDS | 30.0% | |
| AATGTAAATAGGTTCATGGA+TGG | - | chr7_1:79851613-79851632 | None:intergenic | 30.0% | |
| CAACAATGTAAATAGGTTCA+TGG | - | chr7_1:79851617-79851636 | None:intergenic | 30.0% | |
| TGAACCTATTTACATTGTTG+TGG | + | chr7_1:79851617-79851636 | Msa1042100:intron | 30.0% | |
| GTAACCACAACAATGTAAAT+AGG | - | chr7_1:79851624-79851643 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | - | chr7_1:79851662-79851681 | None:intergenic | 30.0% | |
| AAAGAGTCGGCATAATAAAA+AGG | - | chr7_1:79851902-79851921 | None:intergenic | 30.0% | |
| ! | GCGTTAAGCTTTTACATTTT+TGG | + | chr7_1:79852231-79852250 | Msa1042100:intron | 30.0% |
| AAAAAGACCTAACATAGCAA+GGG | - | chr7_1:79852424-79852443 | None:intergenic | 30.0% | |
| AAAAAAGACCTAACATAGCA+AGG | - | chr7_1:79852425-79852444 | None:intergenic | 30.0% | |
| AAGATTGAAAATATGTGCGA+CGG | + | chr7_1:79852846-79852865 | Msa1042100:intron | 30.0% | |
| GATGATCTTCAAAATAGAGT+AGG | + | chr7_1:79852951-79852970 | Msa1042100:intron | 30.0% | |
| CTTCAAAATAGAGTAGGTAT+TGG | + | chr7_1:79852957-79852976 | Msa1042100:intron | 30.0% | |
| TTTAATCCGATTTAGTCATG+CGG | - | chr7_1:79853447-79853466 | None:intergenic | 30.0% | |
| GCAACTTCTTGAAAGTTAAT+AGG | + | chr7_1:79854405-79854424 | Msa1042100:intron | 30.0% | |
| ! | TTCTACGTACTCTGTTATTT+AGG | - | chr7_1:79854752-79854771 | None:intergenic | 30.0% |
| TTGGAAACTACTACTACTTT+AGG | + | chr7_1:79854789-79854808 | Msa1042100:intron | 30.0% | |
| CCAAATAAAAAAATTAGCGG+GGG | - | chr7_1:79854909-79854928 | None:intergenic | 30.0% | |
| CCCAAATAAAAAAATTAGCG+GGG | - | chr7_1:79854910-79854929 | None:intergenic | 30.0% | |
| !!! | CCCCGCTAATTTTTTTATTT+GGG | + | chr7_1:79854907-79854926 | Msa1042100:intron | 30.0% |
| ACTCATCCATAATTATTTGG+GGG | + | chr7_1:79855141-79855160 | Msa1042100:intron | 30.0% | |
| ATAGACCGGGTTATTTAAAA+TGG | + | chr7_1:79855205-79855224 | Msa1042100:intron | 30.0% | |
| ! | TAGACCGGGTTATTTAAAAT+GGG | + | chr7_1:79855206-79855225 | Msa1042100:intron | 30.0% |
| ! | TCAAGTACCCATCATATTTT+TGG | + | chr7_1:79855576-79855595 | Msa1042100:intron | 30.0% |
| CAAAATGCAATAACAGTGAA+TGG | - | chr7_1:79855806-79855825 | None:intergenic | 30.0% | |
| !!! | TTGCATTTTGATTGAACTAG+TGG | + | chr7_1:79855816-79855835 | Msa1042100:intron | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | + | chr7_1:79855817-79855836 | Msa1042100:intron | 30.0% |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7_1:79851252-79851271 | Msa1042100:CDS | 30.0% | |
| GAGATAAAAATGACTCATGT+TGG | + | chr7_1:79851276-79851295 | Msa1042100:intron | 30.0% | |
| ! | AAATGACTCATGTTGGATTT+TGG | + | chr7_1:79855987-79856006 | Msa1042100:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7_1:79851420-79851439 | None:intergenic | 30.0% |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7_1:79851422-79851441 | Msa1042100:CDS | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | - | chr7_1:79851576-79851595 | None:intergenic | 30.0% | |
| AATGTAAATAGGTTCATGGA+TGG | - | chr7_1:79851613-79851632 | None:intergenic | 30.0% | |
| CAACAATGTAAATAGGTTCA+TGG | - | chr7_1:79851617-79851636 | None:intergenic | 30.0% | |
| TGAACCTATTTACATTGTTG+TGG | + | chr7_1:79851617-79851636 | Msa1042100:intron | 30.0% | |
| GTAACCACAACAATGTAAAT+AGG | - | chr7_1:79851624-79851643 | None:intergenic | 30.0% | |
| AATTGTGTAACAGGAAAAAC+AGG | - | chr7_1:79856808-79856827 | None:intergenic | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | - | chr7_1:79856817-79856836 | None:intergenic | 30.0% | |
| ! | ATAGACCGGGTTATTTCAAA+TGG | + | chr7_1:79850437-79850456 | Msa1042100:CDS | 35.0% |
| ! | TAGACCGGGTTATTTCAAAT+GGG | + | chr7_1:79850438-79850457 | Msa1042100:CDS | 35.0% |
| AAATGGGCCCAATACAAAAA+CGG | + | chr7_1:79850454-79850473 | Msa1042100:CDS | 35.0% | |
| TCAAGTACCCATTATAGCTT+TGG | + | chr7_1:79850871-79850890 | Msa1042100:intron | 35.0% | |
| ATATTATGCATCTGTTGTGC+AGG | + | chr7_1:79851720-79851739 | Msa1042100:intron | 35.0% | |
| AAAAAGAGGTCTCAAAGAGT+CGG | - | chr7_1:79851915-79851934 | None:intergenic | 35.0% | |
| GAGAGAACCCAGATATTAAA+TGG | + | chr7_1:79852360-79852379 | Msa1042100:intron | 35.0% | |
| ATTTGCCAAACATTGTAACC+AGG | - | chr7_1:79852505-79852524 | None:intergenic | 35.0% | |
| AGATTGAAAATATGTGCGAC+GGG | + | chr7_1:79852847-79852866 | Msa1042100:intron | 35.0% | |
| AATTGAGAGCTGGAAAAAAG+AGG | - | chr7_1:79853059-79853078 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTCCAGCTCTCAAT+TGG | + | chr7_1:79853058-79853077 | Msa1042100:intron | 35.0% |
| ! | GTTAGACTCTAAGAATATGG+CGG | + | chr7_1:79853116-79853135 | Msa1042100:intron | 35.0% |
| AAACATGACATCACTGAGTT+TGG | + | chr7_1:79853156-79853175 | Msa1042100:intron | 35.0% | |
| !!! | CATAGTTTTAAAACTCGGAC+CGG | + | chr7_1:79853356-79853375 | Msa1042100:intron | 35.0% |
| TCGGATTAAACCGAAAGATT+CGG | + | chr7_1:79853457-79853476 | Msa1042100:intron | 35.0% | |
| CGAGTTATAACCGAATCTTT+CGG | - | chr7_1:79853470-79853489 | None:intergenic | 35.0% | |
| ! | CGAAAGATTCGGTTATAACT+CGG | + | chr7_1:79853468-79853487 | Msa1042100:intron | 35.0% |
| !!! | CATAGTTTTAAAACTCGGAC+CGG | - | chr7_1:79853356-79853375 | None:intergenic | 35.0% |
| TATGGAATCTCACTTCTCTA+CGG | - | chr7_1:79854476-79854495 | None:intergenic | 35.0% | |
| !!! | CCCCCGCTAATTTTTTTATT+TGG | + | chr7_1:79854906-79854925 | Msa1042100:intron | 35.0% |
| CTCATCCATAATTATTTGGG+GGG | + | chr7_1:79855142-79855161 | Msa1042100:intron | 35.0% | |
| ! | TATATACCCGTTTTCGTATC+GGG | - | chr7_1:79855232-79855251 | None:intergenic | 35.0% |
| ! | CTATATACCCGTTTTCGTAT+CGG | - | chr7_1:79855233-79855252 | None:intergenic | 35.0% |
| TACGAAAACGGGTATATAGA+AGG | + | chr7_1:79855234-79855253 | Msa1042100:intron | 35.0% | |
| GATTCATCAACTAAACCCTA+CGG | - | chr7_1:79855438-79855457 | None:intergenic | 35.0% | |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | + | chr7_1:79855690-79855709 | Msa1042100:intron | 35.0% |
| GAATTTATTGCACCCTTGTT+TGG | + | chr7_1:79855849-79855868 | Msa1042100:intron | 35.0% | |
| CAAGGCTATCTGATAGAATT+AGG | - | chr7_1:79856368-79856387 | None:intergenic | 35.0% | |
| ATATTATGCATCTGTTGTGC+AGG | + | chr7_1:79851720-79851739 | Msa1042100:intron | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | + | chr7_1:79856606-79856625 | Msa1042100:intron | 35.0% |
| ! | AAGTTTTACTGGTCAGTACT+TGG | + | chr7_1:79857241-79857260 | Msa1042100:three_prime_UTR | 35.0% |
| TTCAACTTTCCTACTAATCC+TGG | + | chr7_1:79857335-79857354 | Msa1042100:three_prime_UTR | 35.0% | |
| ! | TTGAAAGAACCAGGATTAGT+AGG | - | chr7_1:79857347-79857366 | None:intergenic | 35.0% |
| ATTCTGAACTTGAAAGAACC+AGG | - | chr7_1:79857356-79857375 | None:intergenic | 35.0% | |
| AATGGGCCCAATACAAAAAC+GGG | + | chr7_1:79850455-79850474 | Msa1042100:CDS | 40.0% | |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7_1:79851192-79851211 | None:intergenic | 40.0% |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7_1:79851224-79851243 | Msa1042100:CDS | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7_1:79851237-79851256 | None:intergenic | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7_1:79851238-79851257 | None:intergenic | 40.0% | |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7_1:79851453-79851472 | None:intergenic | 40.0% |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7_1:79851806-79851825 | None:intergenic | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7_1:79852093-79852112 | Msa1042100:CDS | 40.0% | |
| ! | TTGTGCCTTAGATGCTACTT+CGG | - | chr7_1:79852140-79852159 | None:intergenic | 40.0% |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7_1:79852146-79852165 | Msa1042100:CDS | 40.0% |
| CTAACATAGCAAGGGATCAT+TGG | - | chr7_1:79852416-79852435 | None:intergenic | 40.0% | |
| ! | CAATGATCCCTTGCTATGTT+AGG | + | chr7_1:79852414-79852433 | Msa1042100:intron | 40.0% |
| CTGATCCTGGTTACAATGTT+TGG | + | chr7_1:79852497-79852516 | Msa1042100:intron | 40.0% | |
| TACACTTCATCCTACCTTAG+AGG | - | chr7_1:79852926-79852945 | None:intergenic | 40.0% | |
| ! | CGAACATTGAGCTTTTGTGT+TGG | + | chr7_1:79852997-79853016 | Msa1042100:intron | 40.0% |
| AAGAGGCCAAGACACAAATA+GGG | - | chr7_1:79853042-79853061 | None:intergenic | 40.0% | |
| AAAGAGGCCAAGACACAAAT+AGG | - | chr7_1:79853043-79853062 | None:intergenic | 40.0% | |
| ! | AGCTAATTGAGTTGTCACCT+AGG | + | chr7_1:79853301-79853320 | Msa1042100:intron | 40.0% |
| ! | TAATTGAGTTGTCACCTAGG+TGG | + | chr7_1:79853304-79853323 | Msa1042100:intron | 40.0% |
| CTTTGACTAAATCACCACCT+AGG | - | chr7_1:79853321-79853340 | None:intergenic | 40.0% | |
| GTTGAACCGCATGACTAAAT+CGG | + | chr7_1:79853438-79853457 | Msa1042100:intron | 40.0% | |
| TAAGGCTTATGCGAATCAAG+AGG | + | chr7_1:79853883-79853902 | Msa1042100:intron | 40.0% | |
| ATTGCTTAACTAGTGTTCCG+AGG | + | chr7_1:79854341-79854360 | Msa1042100:intron | 40.0% | |
| TTGCTTAACTAGTGTTCCGA+GGG | + | chr7_1:79854342-79854361 | Msa1042100:intron | 40.0% | |
| TCTCACCCCCCAAATAATTA+TGG | - | chr7_1:79855150-79855169 | None:intergenic | 40.0% | |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | + | chr7_1:79855419-79855438 | Msa1042100:intron | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | + | chr7_1:79855420-79855439 | Msa1042100:intron | 40.0% |
| TAAACCCTACGGCAACAAAA+TGG | - | chr7_1:79855427-79855446 | None:intergenic | 40.0% | |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7_1:79851192-79851211 | None:intergenic | 40.0% |
| TCAAAGATTTACCCAGGAAG+AGG | + | chr7_1:79855927-79855946 | Msa1042100:CDS | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7_1:79851224-79851243 | Msa1042100:CDS | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7_1:79851237-79851256 | None:intergenic | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7_1:79851238-79851257 | None:intergenic | 40.0% | |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7_1:79851453-79851472 | None:intergenic | 40.0% |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7_1:79851806-79851825 | None:intergenic | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | - | chr7_1:79856608-79856627 | None:intergenic | 40.0% | |
| !! | CCTTTCTATTATGCTGACTC+TGG | + | chr7_1:79856605-79856624 | Msa1042100:intron | 40.0% |
| ATTTCACTGCAGGATTGACT+CGG | - | chr7_1:79856852-79856871 | None:intergenic | 40.0% | |
| TCAATCCTGCAGTGAAATCA+AGG | + | chr7_1:79856854-79856873 | Msa1042100:intron | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7_1:79852093-79852112 | Msa1042100:CDS | 40.0% | |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | - | chr7_1:79856895-79856914 | None:intergenic | 40.0% |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7_1:79852146-79852165 | Msa1042100:CDS | 40.0% |
| ! | TGGGCCCATTTGAAATAACC+CGG | - | chr7_1:79850445-79850464 | None:intergenic | 45.0% |
| GAATTTATTGCGCCCTTGTG+TGG | + | chr7_1:79851145-79851164 | Msa1042100:intron | 45.0% | |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7_1:79851199-79851218 | Msa1042100:CDS | 45.0% |
| GCAAAGATTTACCCAGGAAG+AGG | + | chr7_1:79851223-79851242 | Msa1042100:CDS | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | + | chr7_1:79851461-79851480 | Msa1042100:CDS | 45.0% | |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7_1:79851491-79851510 | None:intergenic | 45.0% |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7_1:79851492-79851511 | Msa1042100:CDS | 45.0% | |
| ATTTCACTGCGGGATTGACT+CGG | - | chr7_1:79852070-79852089 | None:intergenic | 45.0% | |
| TCAATCCCGCAGTGAAATCA+AGG | + | chr7_1:79852072-79852091 | Msa1042100:intron | 45.0% | |
| TCCTCTCCTTGATTTCACTG+CGG | - | chr7_1:79852081-79852100 | None:intergenic | 45.0% | |
| ! | CTTGGCTTTCTTCTCATCCT+TGG | - | chr7_1:79852113-79852132 | None:intergenic | 45.0% |
| ! | AGATGCTACTTCGGCTTTCT+TGG | - | chr7_1:79852131-79852150 | None:intergenic | 45.0% |
| GAAAGCCGAAGTAGCATCTA+AGG | + | chr7_1:79852132-79852151 | Msa1042100:CDS | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7_1:79852145-79852164 | Msa1042100:CDS | 45.0% |
| AAGGCACAAAAGTCAGGGAA+AGG | + | chr7_1:79852151-79852170 | Msa1042100:CDS | 45.0% | |
| AGGGAAAGGCAATGTTCAGA+AGG | + | chr7_1:79852165-79852184 | Msa1042100:CDS | 45.0% | |
| GGGAAAGGCAATGTTCAGAA+GGG | + | chr7_1:79852166-79852185 | Msa1042100:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7_1:79852192-79852211 | Msa1042100:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7_1:79852193-79852212 | Msa1042100:CDS | 45.0% | |
| GCAGTTCAAGCTAGGACTTT+AGG | - | chr7_1:79852465-79852484 | None:intergenic | 45.0% | |
| AAGTCCTAGCTTGAACTGCT+TGG | + | chr7_1:79852466-79852485 | Msa1042100:intron | 45.0% | |
| ATGTTCCCTATTCCCTACCA+TGG | + | chr7_1:79852525-79852544 | Msa1042100:intron | 45.0% | |
| ATGATTTACAGCTGCCTCCA+TGG | - | chr7_1:79852545-79852564 | None:intergenic | 45.0% | |
| !! | AAATATGTGCGACGGGTTAG+AGG | + | chr7_1:79852854-79852873 | Msa1042100:intron | 45.0% |
| GGTTAGAGGTAATGATGGTC+TGG | + | chr7_1:79852868-79852887 | Msa1042100:intron | 45.0% | |
| GTTCTCCCCTATTTGTGTCT+TGG | + | chr7_1:79853033-79853052 | Msa1042100:intron | 45.0% | |
| AGAGGCCAAGACACAAATAG+GGG | - | chr7_1:79853041-79853060 | None:intergenic | 45.0% | |
| TCACGTATCCAATTGAGAGC+TGG | - | chr7_1:79853069-79853088 | None:intergenic | 45.0% | |
| AACATTGCCGAGTCGATAAC+CGG | - | chr7_1:79853378-79853397 | None:intergenic | 45.0% | |
| !! | TATCGACTCGGCAATGTTAC+TGG | + | chr7_1:79853380-79853399 | Msa1042100:intron | 45.0% |
| !! | ATCGACTCGGCAATGTTACT+GGG | + | chr7_1:79853381-79853400 | Msa1042100:intron | 45.0% |
| TTACTGGGTCACTAGTTCGT+TGG | + | chr7_1:79853396-79853415 | Msa1042100:intron | 45.0% | |
| TGGTTGAACCACTGAGTCAT+TGG | + | chr7_1:79853416-79853435 | Msa1042100:intron | 45.0% | |
| GCTTATGCGAATCAAGAGGA+AGG | + | chr7_1:79853887-79853906 | Msa1042100:intron | 45.0% | |
| !!! | GTTCGGTCTGAGTTTTGGAT+CGG | - | chr7_1:79854072-79854091 | None:intergenic | 45.0% |
| ATCCAAAACTCAGACCGAAC+CGG | + | chr7_1:79854072-79854091 | Msa1042100:intron | 45.0% | |
| !!! | TTTTAAAACTCGGACCGGAC+CGG | - | chr7_1:79854135-79854154 | None:intergenic | 45.0% |
| TGGTTGCTTAACTAATGCCC+CGG | - | chr7_1:79854231-79854250 | None:intergenic | 45.0% | |
| GTCATGTTAATCAGTGCCCT+CGG | - | chr7_1:79854361-79854380 | None:intergenic | 45.0% | |
| ACAGTGATGAGCTGAGATGT+TGG | - | chr7_1:79854656-79854675 | None:intergenic | 45.0% | |
| TTGTTTCAGAGAGAGAGGAG+AGG | - | chr7_1:79854686-79854705 | None:intergenic | 45.0% | |
| AATTATTTGGGGGGTGAGAG+AGG | + | chr7_1:79855151-79855170 | Msa1042100:intron | 45.0% | |
| ! | CGGGCCCATTTTAAATAACC+CGG | - | chr7_1:79855213-79855232 | None:intergenic | 45.0% |
| AAATGGGCCCGATACGAAAA+CGG | + | chr7_1:79855222-79855241 | Msa1042100:intron | 45.0% | |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7_1:79851199-79851218 | Msa1042100:CDS | 45.0% |
| AGTGGCTCAAAGATTTACCC+AGG | + | chr7_1:79855921-79855940 | Msa1042100:CDS | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | + | chr7_1:79851461-79851480 | Msa1042100:CDS | 45.0% | |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7_1:79851491-79851510 | None:intergenic | 45.0% |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7_1:79851492-79851511 | Msa1042100:CDS | 45.0% | |
| AAAGAAAGCCAAGAAAGCCG+AGG | + | chr7_1:79856902-79856921 | Msa1042100:CDS | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | - | chr7_1:79856922-79856941 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7_1:79852145-79852164 | Msa1042100:CDS | 45.0% |
| TAAGGCACAAAAGTCAGGGA+AGG | + | chr7_1:79852150-79852169 | Msa1042100:CDS | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | + | chr7_1:79852151-79852170 | Msa1042100:CDS | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | + | chr7_1:79856947-79856966 | Msa1042100:CDS | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | + | chr7_1:79856948-79856967 | Msa1042100:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7_1:79852192-79852211 | Msa1042100:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7_1:79852193-79852212 | Msa1042100:CDS | 45.0% | |
| GTCAGTACTTGGCACTTGTT+CGG | + | chr7_1:79857252-79857271 | Msa1042100:three_prime_UTR | 45.0% | |
| !!! | AAAATGTTTTAAAAAAATTA+AGG | + | chr7_1:79853699-79853718 | Msa1042100:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | - | chr7_1:79856633-79856652 | None:intergenic | 5.0% |
| AGACGGAGAGAACTGTAACC+TGG | + | chr7_1:79850483-79850502 | Msa1042100:intron | 50.0% | |
| AGTGGCGCAAAGATTTACCC+AGG | + | chr7_1:79851217-79851236 | Msa1042100:CDS | 50.0% | |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7_1:79851469-79851488 | None:intergenic | 50.0% |
| GCAGGACATTGCTCAAGAAG+CGG | + | chr7_1:79851738-79851757 | Msa1042100:intron | 50.0% | |
| CTCAAGAAGCGGTGAAGAAG+AGG | + | chr7_1:79851749-79851768 | Msa1042100:CDS | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7_1:79851777-79851796 | None:intergenic | 50.0% |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7_1:79851793-79851812 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7_1:79851790-79851809 | Msa1042100:CDS | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7_1:79851800-79851819 | None:intergenic | 50.0% | |
| CCTCTCCTTGATTTCACTGC+GGG | - | chr7_1:79852080-79852099 | None:intergenic | 50.0% | |
| AGTGCCAAGCAGTTCAAGCT+AGG | - | chr7_1:79852473-79852492 | None:intergenic | 50.0% | |
| TTCCCTATTCCCTACCATGG+AGG | + | chr7_1:79852528-79852547 | Msa1042100:intron | 50.0% | |
| TGCCTCCATGGTAGGGAATA+GGG | - | chr7_1:79852533-79852552 | None:intergenic | 50.0% | |
| TTACAGCTGCCTCCATGGTA+GGG | - | chr7_1:79852540-79852559 | None:intergenic | 50.0% | |
| TTTACAGCTGCCTCCATGGT+AGG | - | chr7_1:79852541-79852560 | None:intergenic | 50.0% | |
| !! | CGACGGGTTAGAGGTAATGA+TGG | + | chr7_1:79852863-79852882 | Msa1042100:intron | 50.0% |
| CGGTTCAACCAATGACTCAG+TGG | - | chr7_1:79853427-79853446 | None:intergenic | 50.0% | |
| ATAAGCCTTACCACTGCAGC+AGG | - | chr7_1:79853873-79853892 | None:intergenic | 50.0% | |
| TTAAAAAAGTGGCGCCCGAG+AGG | - | chr7_1:79853926-79853945 | None:intergenic | 50.0% | |
| AGTCCTGTTCATAGAACCGC+CGG | + | chr7_1:79853985-79854004 | Msa1042100:intron | 50.0% | |
| GATCGGTTATGCAGTTAGCC+CGG | - | chr7_1:79854055-79854074 | None:intergenic | 50.0% | |
| !!! | AACCGGTTCGGTCTGAGTTT+TGG | - | chr7_1:79854077-79854096 | None:intergenic | 50.0% |
| AAACTCAGACCGAACCGGTT+AGG | + | chr7_1:79854077-79854096 | Msa1042100:intron | 50.0% | |
| AACTCAGACCGAACCGGTTA+GGG | + | chr7_1:79854078-79854097 | Msa1042100:intron | 50.0% | |
| AGAATGTTAACCAGCCCCTC+CGG | + | chr7_1:79854209-79854228 | Msa1042100:intron | 50.0% | |
| TGCTTAACTAATGCCCCGGA+GGG | - | chr7_1:79854227-79854246 | None:intergenic | 50.0% | |
| TTGCTTAACTAATGCCCCGG+AGG | - | chr7_1:79854228-79854247 | None:intergenic | 50.0% | |
| CTCTACGGTGATATGCATCC+AGG | - | chr7_1:79854461-79854480 | None:intergenic | 50.0% | |
| AGAGAGAGAGGAGAGGATTC+AGG | - | chr7_1:79854679-79854698 | None:intergenic | 50.0% | |
| ! | CCACGTTGTTTCAGAGAGAG+AGG | - | chr7_1:79854691-79854710 | None:intergenic | 50.0% |
| !! | CCTCTCTCTCTGAAACAACG+TGG | + | chr7_1:79854688-79854707 | Msa1042100:intron | 50.0% |
| ATGAGCATTCGTCCCTCCTT+TGG | - | chr7_1:79854851-79854870 | None:intergenic | 50.0% | |
| GGGTGAGAGAGGCAAGTATA+GGG | + | chr7_1:79855162-79855181 | Msa1042100:intron | 50.0% | |
| AATGGGCCCGATACGAAAAC+GGG | + | chr7_1:79855223-79855242 | Msa1042100:intron | 50.0% | |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7_1:79851469-79851488 | None:intergenic | 50.0% |
| GCAGGACATTGCTCAAGAAG+CGG | + | chr7_1:79851738-79851757 | Msa1042100:intron | 50.0% | |
| CTCAAGAAGCGGTGAAGAAG+AGG | + | chr7_1:79851749-79851768 | Msa1042100:CDS | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7_1:79851777-79851796 | None:intergenic | 50.0% |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7_1:79851793-79851812 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7_1:79851790-79851809 | Msa1042100:CDS | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7_1:79851800-79851819 | None:intergenic | 50.0% | |
| CCTCTCCTTGATTTCACTGC+AGG | - | chr7_1:79852080-79852099 | None:intergenic | 50.0% | |
| CCTGCAGTGAAATCAAGGAG+AGG | + | chr7_1:79856859-79856878 | Msa1042100:intron | 50.0% | |
| AGATGCTACCTCGGCTTTCT+TGG | - | chr7_1:79856913-79856932 | None:intergenic | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | + | chr7_1:79856914-79856933 | Msa1042100:CDS | 50.0% | |
| TGGCTGCTTCGTTGATGTGG+TGG | - | chr7_1:79850554-79850573 | None:intergenic | 55.0% | |
| CCATGGCTGCTTCGTTGATG+TGG | - | chr7_1:79850557-79850576 | None:intergenic | 55.0% | |
| CCACATCAACGAAGCAGCCA+TGG | + | chr7_1:79850554-79850573 | Msa1042100:CDS | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7_1:79851782-79851801 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7_1:79851779-79851798 | Msa1042100:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7_1:79851785-79851804 | None:intergenic | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7_1:79851837-79851856 | Msa1042100:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7_1:79851848-79851867 | None:intergenic | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7_1:79851856-79851875 | None:intergenic | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7_1:79851857-79851876 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7_1:79851855-79851874 | Msa1042100:CDS | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7_1:79851869-79851888 | Msa1042100:CDS | 55.0% | |
| CCCGCAGTGAAATCAAGGAG+AGG | + | chr7_1:79852077-79852096 | Msa1042100:intron | 55.0% | |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7_1:79852180-79852199 | Msa1042100:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7_1:79852181-79852200 | Msa1042100:CDS | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7_1:79852199-79852218 | None:intergenic | 55.0% |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7_1:79852196-79852215 | Msa1042100:CDS | 55.0% | |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7_1:79852200-79852219 | None:intergenic | 55.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7_1:79852199-79852218 | Msa1042100:CDS | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7_1:79852206-79852225 | Msa1042100:CDS | 55.0% |
| CTTGGCACTTACGCTGATCC+TGG | + | chr7_1:79852484-79852503 | Msa1042100:intron | 55.0% | |
| CTGCCTCCATGGTAGGGAAT+AGG | - | chr7_1:79852534-79852553 | None:intergenic | 55.0% | |
| ! | ACTCGGACCGGTTATCGACT+CGG | + | chr7_1:79853368-79853387 | Msa1042100:intron | 55.0% |
| GGTCGCCTGTTCAATCCTCT+CGG | + | chr7_1:79853908-79853927 | Msa1042100:intron | 55.0% | |
| GTCGCCTGTTCAATCCTCTC+GGG | + | chr7_1:79853909-79853928 | Msa1042100:intron | 55.0% | |
| GGCGGTTCTATGAACAGGAC+TGG | - | chr7_1:79853986-79854005 | None:intergenic | 55.0% | |
| GTCCTGTTCATAGAACCGCC+GGG | + | chr7_1:79853986-79854005 | Msa1042100:intron | 55.0% | |
| ACTCAGACCGAACCGGTTAG+GGG | + | chr7_1:79854079-79854098 | Msa1042100:intron | 55.0% | |
| CAACCGGTTGAACCGGAAAC+CGG | - | chr7_1:79854106-79854125 | None:intergenic | 55.0% | |
| TCCGGTTCAACCGGTTGAAC+CGG | + | chr7_1:79854109-79854128 | Msa1042100:intron | 55.0% | |
| GAATGTTAACCAGCCCCTCC+GGG | + | chr7_1:79854210-79854229 | Msa1042100:intron | 55.0% | |
| AATGTTAACCAGCCCCTCCG+GGG | + | chr7_1:79854211-79854230 | Msa1042100:intron | 55.0% | |
| GCTTAACTAATGCCCCGGAG+GGG | - | chr7_1:79854226-79854245 | None:intergenic | 55.0% | |
| AAGCTCTCCCAAGCCACCAA+AGG | + | chr7_1:79854832-79854851 | Msa1042100:intron | 55.0% | |
| TCTCCCAAGCCACCAAAGGA+GGG | + | chr7_1:79854836-79854855 | Msa1042100:intron | 55.0% | |
| AGCATTCGTCCCTCCTTTGG+TGG | - | chr7_1:79854848-79854867 | None:intergenic | 55.0% | |
| GGGGTGAGAGAGGCAAGTAT+AGG | + | chr7_1:79855161-79855180 | Msa1042100:intron | 55.0% | |
| TGGCTGCTTCGTTGATGTGG+TGG | - | chr7_1:79850554-79850573 | None:intergenic | 55.0% | |
| CCATGGCTGCTTCGTTGATG+TGG | - | chr7_1:79850557-79850576 | None:intergenic | 55.0% | |
| CCACATCAACGAAGCAGCCA+TGG | + | chr7_1:79850554-79850573 | Msa1042100:CDS | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7_1:79851782-79851801 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7_1:79851779-79851798 | Msa1042100:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7_1:79851785-79851804 | None:intergenic | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7_1:79851837-79851856 | Msa1042100:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7_1:79851848-79851867 | None:intergenic | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7_1:79851856-79851875 | None:intergenic | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7_1:79851857-79851876 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7_1:79851855-79851874 | Msa1042100:CDS | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7_1:79851869-79851888 | Msa1042100:CDS | 55.0% | |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7_1:79852180-79852199 | Msa1042100:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7_1:79852181-79852200 | Msa1042100:CDS | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7_1:79852199-79852218 | None:intergenic | 55.0% |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7_1:79852196-79852215 | Msa1042100:CDS | 55.0% | |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7_1:79852200-79852219 | None:intergenic | 55.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7_1:79852199-79852218 | Msa1042100:CDS | 55.0% | |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7_1:79851854-79851873 | Msa1042100:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7_1:79852202-79852221 | Msa1042100:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7_1:79852208-79852227 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7_1:79852205-79852224 | Msa1042100:CDS | 60.0% |
| ! | ACATGAAGCGCCTGCTGCAG+TGG | + | chr7_1:79853860-79853879 | Msa1042100:intron | 60.0% |
| AAGCGCCTGCTGCAGTGGTA+AGG | + | chr7_1:79853865-79853884 | Msa1042100:intron | 60.0% | |
| GACCCGGCGGTTCTATGAAC+AGG | - | chr7_1:79853991-79854010 | None:intergenic | 60.0% | |
| !!! | TCGCCGGTTTTCACCGGTTC+TGG | + | chr7_1:79854009-79854028 | Msa1042100:intron | 60.0% |
| CGGCCAGAACCGGTGAAAAC+CGG | - | chr7_1:79854015-79854034 | None:intergenic | 60.0% | |
| GCAGTTAGCCCGGTGTGAAC+CGG | - | chr7_1:79854045-79854064 | None:intergenic | 60.0% | |
| AACCGGACCCCTAACCGGTT+CGG | - | chr7_1:79854089-79854108 | None:intergenic | 60.0% | |
| GGTCCGGTTTCCGGTTCAAC+CGG | + | chr7_1:79854100-79854119 | Msa1042100:intron | 60.0% | |
| ! | GCCGGTTCAACCGGTTGAAC+CGG | - | chr7_1:79854113-79854132 | None:intergenic | 60.0% |
| GTTCAACCGGTTGAACCGGC+CGG | + | chr7_1:79854113-79854132 | Msa1042100:intron | 60.0% | |
| CTCTCCCAAGCCACCAAAGG+AGG | + | chr7_1:79854835-79854854 | Msa1042100:intron | 60.0% | |
| ! | CGTCCCTCCTTTGGTGGCTT+GGG | - | chr7_1:79854842-79854861 | None:intergenic | 60.0% |
| ! | TCGTCCCTCCTTTGGTGGCT+TGG | - | chr7_1:79854843-79854862 | None:intergenic | 60.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7_1:79851854-79851873 | Msa1042100:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7_1:79852202-79852221 | Msa1042100:CDS | 60.0% | |
| ! | CCTAAAATGGGCGGTGGTGG+CGG | + | chr7_1:79852205-79852224 | Msa1042100:CDS | 60.0% |
| ! | CTAAAATGGGCGGTGGTGGC+GGG | + | chr7_1:79856988-79857007 | Msa1042100:CDS | 60.0% |
| GGCGCCCGAGAGGATTGAAC+AGG | - | chr7_1:79853916-79853935 | None:intergenic | 65.0% | |
| TCATAGAACCGCCGGGTCGC+CGG | + | chr7_1:79853993-79854012 | Msa1042100:intron | 65.0% | |
| ACCGGTGAAAACCGGCGACC+CGG | - | chr7_1:79854007-79854026 | None:intergenic | 65.0% | |
| CGGTGTGAACCGGTGCGACT+CGG | - | chr7_1:79854035-79854054 | None:intergenic | 65.0% | |
| !! | CGAGTCGCACCGGTTCACAC+CGG | + | chr7_1:79854033-79854052 | Msa1042100:intron | 65.0% |
| !! | GAGTCGCACCGGTTCACACC+GGG | + | chr7_1:79854034-79854053 | Msa1042100:intron | 65.0% |
| GACCGAACCGGTTAGGGGTC+CGG | + | chr7_1:79854084-79854103 | Msa1042100:intron | 65.0% | |
| CCGGAAACCGGACCCCTAAC+CGG | - | chr7_1:79854094-79854113 | None:intergenic | 65.0% | |
| CCGGTTAGGGGTCCGGTTTC+CGG | + | chr7_1:79854091-79854110 | Msa1042100:intron | 65.0% | |
| AAAACTCGGACCGGACCGGC+CGG | - | chr7_1:79854131-79854150 | None:intergenic | 65.0% | |
| AACTAATGCCCCGGAGGGGC+TGG | - | chr7_1:79854222-79854241 | None:intergenic | 65.0% | |
| ! | CCGCCACCACCGCCCATTTT+AGG | - | chr7_1:79856990-79857009 | None:intergenic | 65.0% |
| GGTGAAAACCGGCGACCCGG+CGG | - | chr7_1:79854004-79854023 | None:intergenic | 70.0% | |
| !!! | GCCGGGTCGCCGGTTTTCAC+CGG | + | chr7_1:79854003-79854022 | Msa1042100:intron | 70.0% |
| ! | CGGTGCGACTCGGCCAGAAC+CGG | - | chr7_1:79854025-79854044 | None:intergenic | 70.0% |
| ! | CGGTTCTGGCCGAGTCGCAC+CGG | + | chr7_1:79854023-79854042 | Msa1042100:intron | 70.0% |
| ACCGGTTGAACCGGCCGGTC+CGG | + | chr7_1:79854118-79854137 | Msa1042100:intron | 70.0% | |
| ! | ACCGGACCGGCCGGTTCAAC+CGG | - | chr7_1:79854122-79854141 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79850431 | 79857384 | 79850431 | ID=Msa1042100;Name=Msa1042100 |
| chr7_1 | mRNA | 79850431 | 79857384 | 79850431 | ID=Msa1042100-mRNA-1;Parent=Msa1042100;Name=Msa1042100-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.8|0.63|1|0.7|0.63|11|365|370 |
| chr7_1 | exon | 79850431 | 79850476 | 79850431 | ID=Msa1042100-mRNA-1:exon:21631;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79850529 | 79850583 | 79850529 | ID=Msa1042100-mRNA-1:exon:21632;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79851198 | 79851273 | 79851198 | ID=Msa1042100-mRNA-1:exon:21633;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79851412 | 79851513 | 79851412 | ID=Msa1042100-mRNA-1:exon:21634;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79851742 | 79851890 | 79851742 | ID=Msa1042100-mRNA-1:exon:21635;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79852084 | 79852232 | 79852084 | ID=Msa1042100-mRNA-1:exon:21636;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79855296 | 79855350 | 79855296 | ID=Msa1042100-mRNA-1:exon:21637;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79855902 | 79855977 | 79855902 | ID=Msa1042100-mRNA-1:exon:21638;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79856118 | 79856219 | 79856118 | ID=Msa1042100-mRNA-1:exon:21639;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79856448 | 79856596 | 79856448 | ID=Msa1042100-mRNA-1:exon:21640;Parent=Msa1042100-mRNA-1 |
| chr7_1 | exon | 79856866 | 79857384 | 79856866 | ID=Msa1042100-mRNA-1:exon:21641;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79850431 | 79850476 | 79850431 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79850529 | 79850583 | 79850529 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79851198 | 79851273 | 79851198 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79851412 | 79851513 | 79851412 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79851742 | 79851890 | 79851742 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79852084 | 79852232 | 79852084 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79855296 | 79855350 | 79855296 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79855902 | 79855977 | 79855902 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79856118 | 79856219 | 79856118 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79856448 | 79856596 | 79856448 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | CDS | 79856866 | 79857019 | 79856866 | ID=Msa1042100-mRNA-1:cds;Parent=Msa1042100-mRNA-1 |
| chr7_1 | three_prime_UTR | 79857020 | 79857384 | 79857020 | ID=Msa1042100-mRNA-1:three_prime_utr;Parent=Msa1042100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
