AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1254240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254240 MtrunA17_Chr8g0370671 98.618 434 5 1 1 433 1 434 0.0 894
Msa1254240 MtrunA17_Chr5g0406741 73.086 431 103 5 6 431 6 428 0.0 638
Msa1254240 MtrunA17_Chr7g0255771 47.101 276 139 2 158 427 182 456 1.57e-84 266
Msa1254240 MtrunA17_Chr5g0441371 43.223 273 152 3 153 423 143 414 4.14e-75 240
Msa1254240 MtrunA17_Chr8g0357001 47.032 219 116 0 165 383 476 694 1.79e-59 206
Msa1254240 MtrunA17_Chr1g0148681 39.209 278 155 6 155 422 137 410 1.44e-57 194
Msa1254240 MtrunA17_Chr3g0138431 39.608 255 147 3 175 422 213 467 3.37e-55 190
Msa1254240 MtrunA17_Chr3g0125051 35.789 285 171 6 148 423 216 497 2.06e-53 186
Msa1254240 MtrunA17_Chr3g0125041 38.430 242 132 6 196 423 264 502 3.46e-51 180
Msa1254240 MtrunA17_Chr1g0152871 35.827 254 153 4 175 418 91 344 6.95e-49 170
Msa1254240 MtrunA17_Chr2g0332181 38.057 247 146 3 175 414 167 413 1.17e-48 171
Msa1254240 MtrunA17_Chr2g0332171 40.343 233 131 4 158 383 205 436 7.52e-48 171
Msa1254240 MtrunA17_Chr3g0134401 34.263 251 158 3 175 418 74 324 5.11e-45 159
Msa1254240 MtrunA17_Chr3g0134411 33.333 261 165 4 167 418 83 343 1.34e-43 156
Msa1254240 MtrunA17_Chr3g0134421 30.678 339 207 8 98 418 8 336 2.01e-42 153
Msa1254240 MtrunA17_Chr3g0102851 39.623 212 121 3 207 411 60 271 1.30e-39 143
Msa1254240 MtrunA17_Chr3g0134441 35.270 241 137 5 176 402 65 300 4.53e-39 143
Msa1254240 MtrunA17_Chr3g0103471 37.089 213 127 3 206 411 49 261 3.65e-37 137
Msa1254240 MtrunA17_Chr3g0102861 38.318 214 123 5 206 411 49 261 5.89e-36 133
Msa1254240 MtrunA17_Chr3g0102621 37.788 217 126 5 203 411 52 267 1.29e-35 132
Msa1254240 MtrunA17_Chr6g0462981 37.391 230 124 7 203 425 70 286 8.54e-35 131
Msa1254240 MtrunA17_Chr6g0462911 35.747 221 126 5 208 424 75 283 2.95e-33 127
Msa1254240 MtrunA17_Chr3g0102631 37.500 208 116 5 225 424 1 202 4.37e-32 121
Msa1254240 MtrunA17_Chr3g0102651 37.500 208 116 5 225 424 1 202 4.37e-32 121
Msa1254240 MtrunA17_Chr3g0102661 37.500 208 116 5 225 424 1 202 4.37e-32 121
Msa1254240 MtrunA17_Chr3g0102671 37.500 208 116 5 225 424 1 202 4.37e-32 121
Msa1254240 MtrunA17_Chr3g0134431 32.195 205 120 3 207 409 44 231 1.30e-29 115
Msa1254240 MtrunA17_Chr5g0398791 34.104 173 107 3 173 340 1 171 1.17e-22 94.4
Msa1254240 MtrunA17_Chr5g0418901 46.914 81 43 0 229 309 7 87 1.15e-20 86.3
Msa1254240 MtrunA17_Chr1g0161581 33.553 152 91 2 208 358 372 514 6.37e-15 76.6
Msa1254240 MtrunA17_Chr5g0401271 28.395 162 104 5 204 358 101 257 3.84e-14 73.6
Msa1254240 MtrunA17_Chr2g0277271 38.667 75 46 0 194 268 15 89 2.85e-12 62.8
Msa1254240 MtrunA17_Chr3g0134781 31.092 119 79 1 202 317 61 179 4.68e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254240 AT1G20610.1 56.177 429 179 6 5 427 4 429 4.83e-167 476
Msa1254240 AT1G76310.1 56.552 435 169 9 5 427 4 430 1.84e-164 470
Msa1254240 AT1G76310.3 53.132 463 169 10 5 427 4 458 8.37e-158 454
Msa1254240 AT2G17620.1 59.259 405 149 7 29 427 29 423 2.39e-156 449
Msa1254240 AT4G35620.1 57.014 442 162 10 1 429 1 427 2.77e-150 434
Msa1254240 AT1G76310.2 55.357 392 155 9 5 384 4 387 3.09e-140 406
Msa1254240 AT4G35620.2 56.818 396 144 9 1 384 1 381 1.51e-131 384
Msa1254240 AT1G76310.4 54.955 333 130 9 5 325 4 328 2.27e-110 328
Msa1254240 AT3G11520.1 40.054 367 203 4 78 429 48 412 5.21e-85 266
Msa1254240 AT1G20590.1 68.023 172 55 0 233 404 63 234 7.40e-84 258
Msa1254240 AT5G06150.1 37.076 383 202 5 78 427 57 433 8.63e-84 264
Msa1254240 AT2G26760.1 45.525 257 137 3 156 410 111 366 4.01e-77 245
Msa1254240 AT4G37490.1 44.718 284 150 4 150 427 140 422 2.31e-76 244
Msa1254240 AT3G11520.2 39.634 328 181 4 78 390 48 373 1.48e-73 236
Msa1254240 AT1G16330.1 43.728 279 155 1 144 422 366 642 3.49e-73 242
Msa1254240 AT5G25380.3 31.894 417 255 12 21 418 17 423 1.13e-57 196
Msa1254240 AT5G25380.1 31.894 417 255 12 21 418 17 423 1.13e-57 196
Msa1254240 AT5G25380.4 32.143 420 256 13 21 418 17 429 2.79e-57 195
Msa1254240 AT1G77390.1 39.033 269 156 4 158 419 162 429 5.17e-57 194
Msa1254240 AT5G25380.2 31.796 412 252 12 21 413 17 418 1.00e-56 193
Msa1254240 AT5G11300.1 43.363 226 122 2 200 419 198 423 4.86e-55 189
Msa1254240 AT1G44110.1 37.410 278 166 4 149 419 169 445 1.42e-54 188
Msa1254240 AT1G47210.2 37.329 292 171 6 136 418 66 354 3.64e-54 185
Msa1254240 AT5G06150.2 48.571 175 87 2 158 332 165 336 1.02e-53 182
Msa1254240 AT5G43080.2 37.398 246 152 2 175 418 87 332 1.05e-53 183
Msa1254240 AT1G15570.1 38.433 268 157 4 158 418 172 438 4.94e-52 181
Msa1254240 AT5G43080.1 36.653 251 152 3 175 418 87 337 1.54e-51 177
Msa1254240 AT1G80370.1 38.060 268 158 4 158 418 181 447 1.51e-50 177
Msa1254240 AT1G47220.1 35.548 301 173 7 138 418 9 308 9.09e-50 172
Msa1254240 AT1G47230.1 36.863 255 148 5 175 418 95 347 3.46e-49 171
Msa1254240 AT5G11300.2 48.045 179 87 2 200 372 198 376 6.29e-49 172
Msa1254240 AT1G47230.2 36.719 256 148 6 175 418 95 348 2.02e-47 167
Msa1254240 AT1G34460.2 32.450 302 142 9 35 322 142 395 1.80e-37 142
Msa1254240 AT1G34460.4 32.450 302 142 9 35 322 142 395 1.80e-37 142
Msa1254240 AT1G34460.9 32.131 305 142 9 35 322 128 384 6.41e-37 141
Msa1254240 AT1G34460.6 32.131 305 142 9 35 322 142 398 6.89e-37 141
Msa1254240 AT1G34460.3 32.131 305 142 9 35 322 142 398 6.89e-37 141
Msa1254240 AT1G34460.8 32.131 305 142 9 35 322 142 398 6.89e-37 141
Msa1254240 AT1G34460.1 32.131 305 142 9 35 322 142 398 6.89e-37 141
Msa1254240 AT1G34460.7 32.131 305 142 9 35 322 142 398 7.26e-37 141
Msa1254240 AT1G34460.5 32.131 305 142 9 35 322 142 398 8.18e-37 141
Msa1254240 AT1G14750.1 31.381 239 156 5 151 386 335 568 1.17e-20 95.1
Msa1254240 AT1G14750.3 31.381 239 156 5 151 386 335 568 1.40e-20 94.7
Msa1254240 AT1G14750.2 31.381 239 156 5 151 386 167 400 1.89e-20 93.2
Msa1254240 AT1G14750.4 31.381 239 155 6 151 386 167 399 2.78e-19 89.7
Msa1254240 AT1G47210.1 37.692 130 75 4 136 262 66 192 2.49e-17 80.5

Find 114 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACGTGTGCTGCTGATTT+TGG 0.175907 8_2:-52269097 Msa1254240:three_prime_UTR
TGGATTCTTGGGTTGAATCT+TGG 0.236158 8_2:-52272775 Msa1254240:five_prime_UTR
CCATTGAATTCGAATGAGTT+TGG 0.261009 8_2:-52271436 Msa1254240:CDS
TATAGAGGGAGAGATGATTT+TGG 0.262359 8_2:-52271202 Msa1254240:CDS
CAACTTTGGTTGCTTGTTCT+AGG 0.265318 8_2:-52269045 Msa1254240:three_prime_UTR
GTTATAAAAGCATCAAATAA+AGG 0.271934 8_2:+52268858 None:intergenic
GGATTCTTGGGTTGAATCTT+GGG 0.294348 8_2:-52272774 Msa1254240:five_prime_UTR
TATGTCTTTGAACAAAATAA+TGG 0.304430 8_2:-52268911 Msa1254240:three_prime_UTR
GGGCAGAACAGAAGAGCTTT+AGG 0.305806 8_2:-52272449 Msa1254240:CDS
TGAAAAGAAACAGGCTGATC+TGG 0.314414 8_2:-52272208 Msa1254240:CDS
ATAGGCTCTGGTTGGTCTTC+TGG 0.320848 8_2:+52271379 None:intergenic
TAATCTCATAGACAGATTCT+TGG 0.324335 8_2:-52270120 Msa1254240:CDS
TGTAAGCTCTGTCAGCTATA+TGG 0.334048 8_2:+52269991 None:intergenic
TGGTCTTGTTGCCATGCTTT+TGG 0.336057 8_2:-52270060 Msa1254240:CDS
GGTTGAGATGGAGGATATAG+AGG 0.350208 8_2:-52271217 Msa1254240:CDS
AGGTTTGCTGCACAAATTGC+TGG 0.354792 8_2:-52271595 Msa1254240:CDS
CCAAACTCATTCGAATTCAA+TGG 0.363201 8_2:+52271436 None:intergenic
ATGTCTTTGAACAAAATAAT+GGG 0.363772 8_2:-52268910 Msa1254240:three_prime_UTR
GGTTGCTTGTTCTAGGGAAA+TGG 0.368929 8_2:-52269038 Msa1254240:three_prime_UTR
AGTTTCTGTGCCTGTCGTTT+CGG 0.378515 8_2:-52270021 Msa1254240:CDS
AAATCAGCAGCACACGTATA+TGG 0.383331 8_2:+52269100 None:intergenic
TTTCTTGGTTGAGCTATCTC+TGG 0.388305 8_2:-52269637 Msa1254240:CDS
ATTACCTTCCTGCAGTATCT+TGG 0.391858 8_2:-52270364 Msa1254240:intron
ATGCACTCCCGTCAGTTTCC+CGG 0.396721 8_2:+52269246 None:intergenic
TTATAAAAGCATCAAATAAA+GGG 0.399959 8_2:+52268859 None:intergenic
ACGGGAGTGCATAGGAAGTA+TGG 0.400928 8_2:-52269235 Msa1254240:CDS
CCAACCAGAGCCTATGACTT+TGG 0.406687 8_2:-52271371 Msa1254240:CDS
GAAATTATTATGTTCACCTA+TGG 0.409336 8_2:+52268944 None:intergenic
TGAGATTTGTGAAAAGAAAC+AGG 0.423211 8_2:-52272217 Msa1254240:CDS
CATGGTGGTGGAAGAATTGT+TGG 0.432361 8_2:-52272470 Msa1254240:CDS
TGAAACATAAAGAGCAACTT+TGG 0.433750 8_2:-52269059 Msa1254240:three_prime_UTR
TCCCGTCAGTTTCCCGGCTC+CGG 0.437003 8_2:+52269252 None:intergenic
AAGAAGAAAACGAGAATAAC+GGG 0.438031 8_2:+52272884 None:intergenic
TTAGGAAGAGGTTGAGATGG+AGG 0.445763 8_2:-52271226 Msa1254240:intron
AAGGAAAGACATTCTCGAAA+TGG 0.454782 8_2:-52269967 Msa1254240:intron
CTGACTCTCCTTCCTATGGC+TGG 0.455889 8_2:+52269149 None:intergenic
GCTGAAGTTTCCACCATCCT+TGG 0.461545 8_2:-52269601 Msa1254240:CDS
TCAGTATGCTCCAAAGTCAT+AGG 0.464004 8_2:+52271361 None:intergenic
CTGTGTTTCACCAACCTACA+TGG 0.464678 8_2:-52270341 Msa1254240:CDS
GAAGAAGAAAACGAGAATAA+CGG 0.477596 8_2:+52272883 None:intergenic
AACTTTGGTTGCTTGTTCTA+GGG 0.482023 8_2:-52269044 Msa1254240:three_prime_UTR
TTCACCAGAAAGCCGGAGCC+GGG 0.486832 8_2:-52269264 Msa1254240:CDS
CTTGGTTGAGCTATCTCTGG+TGG 0.487275 8_2:-52269634 Msa1254240:CDS
TGCTCCAAAGTCATAGGCTC+TGG 0.489422 8_2:+52271367 None:intergenic
GTTATGCCAAGAAAATTTCA+AGG 0.494043 8_2:-52272659 Msa1254240:intron
TTTCACCAGAAAGCCGGAGC+CGG 0.498847 8_2:-52269265 Msa1254240:CDS
CATCATCCTCACCTTGTGAT+GGG 0.499765 8_2:+52272177 None:intergenic
AAACAATTCTCTTGCTGTTG+TGG 0.505256 8_2:-52271160 Msa1254240:CDS
TTGACCTCAATGAGAGGATG+AGG 0.506853 8_2:-52270309 Msa1254240:CDS
TATAAAAGCATCAAATAAAG+GGG 0.511440 8_2:+52268860 None:intergenic
TAAAATAATACCATCTCAAG+TGG 0.513574 8_2:+52271322 None:intergenic
TAACTTGAGTTCATCATCAA+TGG 0.515623 8_2:+52271402 None:intergenic
ATGGCTGACTCTCCTTCCTA+TGG 0.517353 8_2:+52269145 None:intergenic
GTTGGATTTCACCAGAAAGC+CGG 0.518843 8_2:-52269271 Msa1254240:CDS
GCCGGAGCCGGGAAACTGAC+GGG 0.526709 8_2:-52269253 Msa1254240:CDS
GCATCATCCTCACCTTGTGA+TGG 0.528830 8_2:+52272176 None:intergenic
AATCAAGTGGGTCATGGTGG+TGG 0.531920 8_2:-52272482 Msa1254240:CDS
GTTGAGATGGAGGATATAGA+GGG 0.532314 8_2:-52271216 Msa1254240:CDS
GAAAAGAAACAGGCTGATCT+GGG 0.542053 8_2:-52272207 Msa1254240:CDS
CAATCTTTCTGTAGTAAGCA+TGG 0.544092 8_2:+52271121 None:intergenic
AGCCGGAGCCGGGAAACTGA+CGG 0.546193 8_2:-52269254 Msa1254240:CDS
CTGTCAGTGGTTTCAAACAC+TGG 0.547379 8_2:-52269545 Msa1254240:CDS
TTTGAAACAGCTTGAGCTGG+TGG 0.549805 8_2:-52269664 Msa1254240:intron
CTCATGAAAACATAAGCAGT+TGG 0.552049 8_2:+52269806 None:intergenic
TTCTCCAGAAGAAAACATGC+TGG 0.555497 8_2:+52269178 None:intergenic
AACAAGAACCAGCCATAGGA+AGG 0.559388 8_2:-52269157 Msa1254240:exon
GCAGCAGCAGCAACCAAGGA+TGG 0.560029 8_2:+52269588 None:intergenic
GACAGCAGCAGCAGCAACCA+AGG 0.561171 8_2:+52269584 None:intergenic
TGTAAGAAAGAAACTTCAGC+TGG 0.563142 8_2:-52270084 Msa1254240:CDS
ACCCTTGTGTTGTACACAAG+AGG 0.563360 8_2:-52272391 Msa1254240:CDS
AGAAAGAAACTTCAGCTGGT+TGG 0.565294 8_2:-52270080 Msa1254240:CDS
TAGAGAGTGCTCTATGCTGA+TGG 0.570792 8_2:-52269293 Msa1254240:CDS
TCAAGTGGATCACTATGCAT+TGG 0.570854 8_2:+52271337 None:intergenic
CCAAAGTCATAGGCTCTGGT+TGG 0.576471 8_2:+52271371 None:intergenic
ACTAGTTGACTGGCTGATTG+AGG 0.576580 8_2:-52270281 Msa1254240:intron
AGTTGTTCATCCATGTAGGT+TGG 0.578213 8_2:+52270331 None:intergenic
GAGTGCTCTATGCTGATGGT+TGG 0.583871 8_2:-52269289 Msa1254240:CDS
TTTCATGAGAAGGTTTCTGA+AGG 0.585150 8_2:-52269792 Msa1254240:CDS
ACCCTCTTGTGTACAACACA+AGG 0.585319 8_2:+52272389 None:intergenic
GGAATGAATCAAGTGGGTCA+TGG 0.585969 8_2:-52272488 Msa1254240:CDS
TGCTTACTACAGAAAGATTG+AGG 0.587812 8_2:-52271118 Msa1254240:intron
TGTTTGTAAGTAGCTATACA+TGG 0.587823 8_2:+52269126 None:intergenic
GCATAGTGATCCACTTGAGA+TGG 0.589041 8_2:-52271332 Msa1254240:intron
GAGTTCATCATCAATGGCGA+TGG 0.589270 8_2:+52271408 None:intergenic
TTGTGTACAACACAAGGGTA+AGG 0.590139 8_2:+52272395 None:intergenic
AAGAGAAACTACCTCAGCAT+AGG 0.594491 8_2:+52271561 None:intergenic
GGAAACTGACGGGAGTGCAT+AGG 0.596835 8_2:-52269243 Msa1254240:CDS
ATGGTGGTGGAAGAATTGTT+GGG 0.599493 8_2:-52272469 Msa1254240:CDS
TGAGGGCTATACTAGTTGAC+TGG 0.601446 8_2:-52270291 Msa1254240:CDS
CAGAACAGAAGAGCTTTAGG+AGG 0.603464 8_2:-52272446 Msa1254240:CDS
TGGATCAGATCCGAAACGAC+AGG 0.607714 8_2:+52270011 None:intergenic
GCAGCAGCAACCAAGGATGG+TGG 0.610277 8_2:+52269591 None:intergenic
CCCTTGTGTTGTACACAAGA+GGG 0.611245 8_2:-52272390 Msa1254240:CDS
TAGCCCTCATCCTCTCATTG+AGG 0.620243 8_2:+52270305 None:intergenic
TTTAGGAGGAATGAATCAAG+TGG 0.621092 8_2:-52272495 Msa1254240:intron
GTCAAGTTGTTCATCCATGT+AGG 0.623557 8_2:+52270327 None:intergenic
ATAAAAGCATCAAATAAAGG+GGG 0.625239 8_2:+52268861 None:intergenic
ATACTTGCATGCCAAAAGCA+TGG 0.626148 8_2:+52270049 None:intergenic
CTAGTGTCAGTGAATGCTAG+TGG 0.626231 8_2:-52272842 Msa1254240:five_prime_UTR
GGAGAACAAGAACCAGCCAT+AGG 0.628255 8_2:-52269161 Msa1254240:exon
AACAACTTGACCTCAATGAG+AGG 0.630153 8_2:-52270315 Msa1254240:CDS
ACAGCTCAATGCACTGTCAG+TGG 0.642330 8_2:-52269558 Msa1254240:CDS
TTAGGAGGAATGAATCAAGT+GGG 0.649963 8_2:-52272494 Msa1254240:intron
TGACCTCAATGAGAGGATGA+GGG 0.651271 8_2:-52270308 Msa1254240:CDS
AGAACAGAAGAGCTTTAGGA+GGG 0.662736 8_2:-52272445 Msa1254240:CDS
GAAACAGTGTCTCTTGCATG+AGG 0.663445 8_2:+52270150 None:intergenic
CTCACAGCAATCCTATGCTG+AGG 0.663582 8_2:-52271572 Msa1254240:intron
TAAAAGCATCAAATAAAGGG+GGG 0.672476 8_2:+52268862 None:intergenic
ATGAATCAAGTGGGTCATGG+TGG 0.688882 8_2:-52272485 Msa1254240:CDS
TAAGGGAAAGAACAACAACA+TGG 0.706475 8_2:-52272714 Msa1254240:exon
TAGCTGACAGAGCTTACACA+AGG 0.713688 8_2:-52269986 Msa1254240:CDS
TGGGACATAGACCCATCACA+AGG 0.714635 8_2:-52272188 Msa1254240:intron
CCCTCTTGTGTACAACACAA+GGG 0.715744 8_2:+52272390 None:intergenic
ACTGGAACAAGACATGCGAG+TGG 0.734063 8_2:-52269527 Msa1254240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTTAAAGATTTGAAT+TGG - chr8_2:52269166-52269185 Msa1254240:CDS 10.0%
!! TAAATTTAAAGATTTGAATT+GGG - chr8_2:52269167-52269186 Msa1254240:CDS 10.0%
!!! TTTTTTTATGATTATTAGTT+TGG - chr8_2:52269416-52269435 Msa1254240:intron 10.0%
!!! ACAAATTTTGATATTTATTA+TGG - chr8_2:52270896-52270915 Msa1254240:intron 10.0%
!! TTAAATTTAAAGATTTGAAT+TGG - chr8_2:52269166-52269185 Msa1254240:CDS 10.0%
!! TAAATTTAAAGATTTGAATT+GGG - chr8_2:52269167-52269186 Msa1254240:CDS 10.0%
!!! TTTTTTTATGATTATTAGTT+TGG - chr8_2:52269416-52269435 Msa1254240:intron 10.0%
!!! ACAAATTTTGATATTTATTA+TGG - chr8_2:52270896-52270915 Msa1254240:intron 10.0%
!!! GATTCAAAATTAGTTTTTTA+TGG - chr8_2:52269141-52269160 Msa1254240:three_prime_UTR 15.0%
!!! TTGAATCTTTTTTGAATTTT+AGG - chr8_2:52269201-52269220 Msa1254240:CDS 15.0%
!!! AATTTTGAAATTTAATGTCA+TGG - chr8_2:52269617-52269636 Msa1254240:CDS 15.0%
!! AAGAATTATGTAATCAAAAT+TGG - chr8_2:52269749-52269768 Msa1254240:intron 15.0%
!!! TGTTAAATTTTGAAATTGAA+TGG - chr8_2:52269772-52269791 Msa1254240:CDS 15.0%
!!! TTTAAAATTCCAATATAATC+CGG + chr8_2:52270623-52270642 None:intergenic 15.0%
!!! CTAAAATCATATTTTTAAGT+TGG - chr8_2:52271236-52271255 Msa1254240:intron 15.0%
!!! TTATAAAAGCATCAAATAAA+GGG + chr8_2:52272857-52272876 None:intergenic 15.0%
!!! GATTCAAAATTAGTTTTTTA+TGG - chr8_2:52269141-52269160 Msa1254240:three_prime_UTR 15.0%
!!! TTGAATCTTTTTTGAATTTT+AGG - chr8_2:52269201-52269220 Msa1254240:CDS 15.0%
!!! AATTTTGAAATTTAATGTCA+TGG - chr8_2:52269617-52269636 Msa1254240:CDS 15.0%
!! AAGAATTATGTAATCAAAAT+TGG - chr8_2:52269749-52269768 Msa1254240:intron 15.0%
!!! TGTTAAATTTTGAAATTGAA+TGG - chr8_2:52269772-52269791 Msa1254240:CDS 15.0%
!!! TTTAAAATTCCAATATAATC+CGG + chr8_2:52270623-52270642 None:intergenic 15.0%
!!! CTAAAATCATATTTTTAAGT+TGG - chr8_2:52271236-52271255 Msa1254240:intron 15.0%
!!! TTATAAAAGCATCAAATAAA+GGG + chr8_2:52272857-52272876 None:intergenic 15.0%
!!! TACATTGTTGAAATTTTGAT+TGG - chr8_2:52269077-52269096 Msa1254240:three_prime_UTR 20.0%
!!! AAATTTTGATTGGAACATAA+AGG - chr8_2:52269087-52269106 Msa1254240:three_prime_UTR 20.0%
!!! AATCTTTTTTGAATTTTAGG+AGG - chr8_2:52269204-52269223 Msa1254240:CDS 20.0%
!!! TTATTAGTTTGGTTTCTTTA+AGG - chr8_2:52269427-52269446 Msa1254240:intron 20.0%
!! TTATTGTCAAGTGAAATTAT+AGG - chr8_2:52269651-52269670 Msa1254240:CDS 20.0%
!! TATTGTCAAGTGAAATTATA+GGG - chr8_2:52269652-52269671 Msa1254240:CDS 20.0%
!! CATAATTTCATTCAACAATA+AGG + chr8_2:52269810-52269829 None:intergenic 20.0%
!! CTTATTGTTGAATGAAATTA+TGG - chr8_2:52269808-52269827 Msa1254240:CDS 20.0%
!! ATTTCATTACATAAATCATG+GGG + chr8_2:52270056-52270075 None:intergenic 20.0%
!! CATTTCATTACATAAATCAT+GGG + chr8_2:52270057-52270076 None:intergenic 20.0%
!! TCATTTCATTACATAAATCA+TGG + chr8_2:52270058-52270077 None:intergenic 20.0%
!! ATGATTTATGTAATGAAATG+AGG - chr8_2:52270057-52270076 Msa1254240:CDS 20.0%
!! ATGTTGATGTATTGTTAATT+AGG - chr8_2:52270095-52270114 Msa1254240:CDS 20.0%
!! TTAAACTAAATTCTGAATCA+TGG - chr8_2:52270223-52270242 Msa1254240:intron 20.0%
!!! TGGAATTTTAAACTTCATAT+TGG - chr8_2:52270631-52270650 Msa1254240:intron 20.0%
!! ATGGAATTATTATTAAGCTT+AGG - chr8_2:52270978-52270997 Msa1254240:intron 20.0%
!!! TCATATTTTTAAGTTGGTTT+TGG - chr8_2:52271242-52271261 Msa1254240:intron 20.0%
!!! TATTATACTTTTGATTCGAT+TGG + chr8_2:52271288-52271307 None:intergenic 20.0%
!! ACAAAGATATCAATAATTTG+AGG + chr8_2:52271477-52271496 None:intergenic 20.0%
!!! TATCTTTGTCATTTAATAAC+CGG - chr8_2:52271488-52271507 Msa1254240:intron 20.0%
!! TGTGAAAAATTATTACAAGA+TGG + chr8_2:52271784-52271803 None:intergenic 20.0%
!! ATTAGTTACATTGAATTGAA+CGG + chr8_2:52271817-52271836 None:intergenic 20.0%
!! GATTATAGTATAAGTACTTA+TGG - chr8_2:52272308-52272327 Msa1254240:intron 20.0%
!!! GTTAAGTTACTTTTATTCTT+TGG - chr8_2:52272720-52272739 Msa1254240:five_prime_UTR 20.0%
!! TATGTCTTTGAACAAAATAA+TGG - chr8_2:52272802-52272821 Msa1254240:five_prime_UTR 20.0%
!! ATGTCTTTGAACAAAATAAT+GGG - chr8_2:52272803-52272822 Msa1254240:five_prime_UTR 20.0%
!!! TATAAAAGCATCAAATAAAG+GGG + chr8_2:52272856-52272875 None:intergenic 20.0%
!!! GTTATAAAAGCATCAAATAA+AGG + chr8_2:52272858-52272877 None:intergenic 20.0%
!!! TACATTGTTGAAATTTTGAT+TGG - chr8_2:52269077-52269096 Msa1254240:three_prime_UTR 20.0%
!!! AAATTTTGATTGGAACATAA+AGG - chr8_2:52269087-52269106 Msa1254240:three_prime_UTR 20.0%
!!! AATCTTTTTTGAATTTTAGG+AGG - chr8_2:52269204-52269223 Msa1254240:CDS 20.0%
!!! TTATTAGTTTGGTTTCTTTA+AGG - chr8_2:52269427-52269446 Msa1254240:intron 20.0%
!! TTATTGTCAAGTGAAATTAT+AGG - chr8_2:52269651-52269670 Msa1254240:CDS 20.0%
!! TATTGTCAAGTGAAATTATA+GGG - chr8_2:52269652-52269671 Msa1254240:CDS 20.0%
!! CATAATTTCATTCAACAATA+AGG + chr8_2:52269810-52269829 None:intergenic 20.0%
!! CTTATTGTTGAATGAAATTA+TGG - chr8_2:52269808-52269827 Msa1254240:CDS 20.0%
!! ATTTCATTACATAAATCATG+GGG + chr8_2:52270056-52270075 None:intergenic 20.0%
!! CATTTCATTACATAAATCAT+GGG + chr8_2:52270057-52270076 None:intergenic 20.0%
!! TCATTTCATTACATAAATCA+TGG + chr8_2:52270058-52270077 None:intergenic 20.0%
!! ATGATTTATGTAATGAAATG+AGG - chr8_2:52270057-52270076 Msa1254240:CDS 20.0%
!! ATGTTGATGTATTGTTAATT+AGG - chr8_2:52270095-52270114 Msa1254240:CDS 20.0%
!! TTAAACTAAATTCTGAATCA+TGG - chr8_2:52270223-52270242 Msa1254240:intron 20.0%
!!! TGGAATTTTAAACTTCATAT+TGG - chr8_2:52270631-52270650 Msa1254240:intron 20.0%
!! ATGGAATTATTATTAAGCTT+AGG - chr8_2:52270978-52270997 Msa1254240:intron 20.0%
!!! TCATATTTTTAAGTTGGTTT+TGG - chr8_2:52271242-52271261 Msa1254240:intron 20.0%
!!! TATTATACTTTTGATTCGAT+TGG + chr8_2:52271288-52271307 None:intergenic 20.0%
!! ACAAAGATATCAATAATTTG+AGG + chr8_2:52271477-52271496 None:intergenic 20.0%
!!! TATCTTTGTCATTTAATAAC+CGG - chr8_2:52271488-52271507 Msa1254240:intron 20.0%
!! TGTGAAAAATTATTACAAGA+TGG + chr8_2:52271784-52271803 None:intergenic 20.0%
!! ATTAGTTACATTGAATTGAA+CGG + chr8_2:52271817-52271836 None:intergenic 20.0%
!! GATTATAGTATAAGTACTTA+TGG - chr8_2:52272308-52272327 Msa1254240:intron 20.0%
!!! GTTAAGTTACTTTTATTCTT+TGG - chr8_2:52272720-52272739 Msa1254240:five_prime_UTR 20.0%
!! TATGTCTTTGAACAAAATAA+TGG - chr8_2:52272802-52272821 Msa1254240:five_prime_UTR 20.0%
!! ATGTCTTTGAACAAAATAAT+GGG - chr8_2:52272803-52272822 Msa1254240:five_prime_UTR 20.0%
!!! TATAAAAGCATCAAATAAAG+GGG + chr8_2:52272856-52272875 None:intergenic 20.0%
!!! GTTATAAAAGCATCAAATAA+AGG + chr8_2:52272858-52272877 None:intergenic 20.0%
!! TTTTCTTCTTCTTCATATCT+TGG - chr8_2:52268842-52268861 Msa1254240:three_prime_UTR 25.0%
!!! TTCTCTTTTTTTTCTTCTTC+TGG - chr8_2:52268911-52268930 Msa1254240:three_prime_UTR 25.0%
!!! TCTCTTTTTTTTCTTCTTCT+GGG - chr8_2:52268912-52268931 Msa1254240:three_prime_UTR 25.0%
!! AATGTACCTTGAAATTTTCT+TGG + chr8_2:52269063-52269082 None:intergenic 25.0%
!!! TTAAGGTTAATTGTTTTGTC+TGG - chr8_2:52269444-52269463 Msa1254240:intron 25.0%
!!! TGTTTTGTTTTTGTTGTTGT+TGG - chr8_2:52269568-52269587 Msa1254240:CDS 25.0%
!!! GTTTTGTTTTTGTTGTTGTT+GGG - chr8_2:52269569-52269588 Msa1254240:CDS 25.0%
! TCAATTTCAAACATGTAGAT+TGG - chr8_2:52269678-52269697 Msa1254240:intron 25.0%
!!! AATTTTGAAATTGAATGGCA+TGG - chr8_2:52269777-52269796 Msa1254240:CDS 25.0%
!!! TGTTTTCTTTTGTTGTTGTT+AGG - chr8_2:52269890-52269909 Msa1254240:intron 25.0%
! TTGATGTATTGTTAATTAGG+AGG - chr8_2:52270098-52270117 Msa1254240:CDS 25.0%
! TAAAATAATACCATCTCAAG+TGG + chr8_2:52270394-52270413 None:intergenic 25.0%
!! GCAATTTTATTGTAGATTTG+AGG - chr8_2:52270940-52270959 Msa1254240:intron 25.0%
! ATATCAATGATCTTACAAGT+TGG - chr8_2:52271022-52271041 Msa1254240:intron 25.0%
! AATATCTAACACTGTTATGT+TGG - chr8_2:52271130-52271149 Msa1254240:CDS 25.0%
!! TTATACATTTTCACCTATCT+CGG + chr8_2:52271210-52271229 None:intergenic 25.0%
! AAGCATATCAATATTTAAGC+CGG + chr8_2:52271510-52271529 None:intergenic 25.0%
! TATGACTAATGAAACTCATT+TGG + chr8_2:52271986-52272005 None:intergenic 25.0%
! GAAATTATTATGTTCACCTA+TGG + chr8_2:52272772-52272791 None:intergenic 25.0%
!!! ATAAAAGCATCAAATAAAGG+GGG + chr8_2:52272855-52272874 None:intergenic 25.0%
!! TTTTCTTCTTCTTCATATCT+TGG - chr8_2:52268842-52268861 Msa1254240:three_prime_UTR 25.0%
!!! TTCTCTTTTTTTTCTTCTTC+TGG - chr8_2:52268911-52268930 Msa1254240:three_prime_UTR 25.0%
!!! TCTCTTTTTTTTCTTCTTCT+GGG - chr8_2:52268912-52268931 Msa1254240:three_prime_UTR 25.0%
!! AATGTACCTTGAAATTTTCT+TGG + chr8_2:52269063-52269082 None:intergenic 25.0%
!!! TTAAGGTTAATTGTTTTGTC+TGG - chr8_2:52269444-52269463 Msa1254240:intron 25.0%
!!! TGTTTTGTTTTTGTTGTTGT+TGG - chr8_2:52269568-52269587 Msa1254240:CDS 25.0%
!!! GTTTTGTTTTTGTTGTTGTT+GGG - chr8_2:52269569-52269588 Msa1254240:CDS 25.0%
! TCAATTTCAAACATGTAGAT+TGG - chr8_2:52269678-52269697 Msa1254240:intron 25.0%
!!! AATTTTGAAATTGAATGGCA+TGG - chr8_2:52269777-52269796 Msa1254240:CDS 25.0%
!!! TGTTTTCTTTTGTTGTTGTT+AGG - chr8_2:52269890-52269909 Msa1254240:intron 25.0%
! TTGATGTATTGTTAATTAGG+AGG - chr8_2:52270098-52270117 Msa1254240:CDS 25.0%
! TAAAATAATACCATCTCAAG+TGG + chr8_2:52270394-52270413 None:intergenic 25.0%
!! GCAATTTTATTGTAGATTTG+AGG - chr8_2:52270940-52270959 Msa1254240:intron 25.0%
! ATATCAATGATCTTACAAGT+TGG - chr8_2:52271022-52271041 Msa1254240:intron 25.0%
! AATATCTAACACTGTTATGT+TGG - chr8_2:52271130-52271149 Msa1254240:CDS 25.0%
!! TTATACATTTTCACCTATCT+CGG + chr8_2:52271210-52271229 None:intergenic 25.0%
! AAGCATATCAATATTTAAGC+CGG + chr8_2:52271510-52271529 None:intergenic 25.0%
! TATGACTAATGAAACTCATT+TGG + chr8_2:52271986-52272005 None:intergenic 25.0%
! GAAATTATTATGTTCACCTA+TGG + chr8_2:52272772-52272791 None:intergenic 25.0%
!!! ATAAAAGCATCAAATAAAGG+GGG + chr8_2:52272855-52272874 None:intergenic 25.0%
AAGAAGAAAACGAGAATAAC+GGG + chr8_2:52268832-52268851 None:intergenic 30.0%
GAAGAAGAAAACGAGAATAA+CGG + chr8_2:52268833-52268852 None:intergenic 30.0%
!!! TTTTTTCTTCTTCTGGGTTT+TGG - chr8_2:52268918-52268937 Msa1254240:three_prime_UTR 30.0%
GTTATGCCAAGAAAATTTCA+AGG - chr8_2:52269054-52269073 Msa1254240:three_prime_UTR 30.0%
TGATTGGAACATAAAGGAAA+AGG - chr8_2:52269093-52269112 Msa1254240:three_prime_UTR 30.0%
! ATCAATCAGAATTTTGTGCA+TGG - chr8_2:52269291-52269310 Msa1254240:CDS 30.0%
TGAGATTTGTGAAAAGAAAC+AGG - chr8_2:52269496-52269515 Msa1254240:intron 30.0%
GGAAACATTTGATCGAAAAT+TGG - chr8_2:52269590-52269609 Msa1254240:CDS 30.0%
CACTTGACAATAAAGTAACA+TGG + chr8_2:52269644-52269663 None:intergenic 30.0%
! TGGTGTTTTCAATTGTAGAT+TGG - chr8_2:52269828-52269847 Msa1254240:CDS 30.0%
AAATTTAATGCCATAGACCA+TGG - chr8_2:52269945-52269964 Msa1254240:intron 30.0%
!!! TGTTGATTGATGCTGATTTT+TGG - chr8_2:52270012-52270031 Msa1254240:CDS 30.0%
!!! GTTGATTGATGCTGATTTTT+GGG - chr8_2:52270013-52270032 Msa1254240:CDS 30.0%
!!! TTGATTGATGCTGATTTTTG+GGG - chr8_2:52270014-52270033 Msa1254240:CDS 30.0%
TAACTTGAGTTCATCATCAA+TGG + chr8_2:52270314-52270333 None:intergenic 30.0%
TCTTCCTAAAAAGTAGTACA+CGG + chr8_2:52270476-52270495 None:intergenic 30.0%
TCACAAAACTAACTTCTATC+AGG + chr8_2:52270659-52270678 None:intergenic 30.0%
!!! CATTAGTCTGCTTTTTTGTA+TGG - chr8_2:52270708-52270727 Msa1254240:intron 30.0%
AACTTGCAAGTTGTAAAACT+TGG - chr8_2:52270856-52270875 Msa1254240:intron 30.0%
! GAGGTTGATTATCTTTACAA+TGG - chr8_2:52270959-52270978 Msa1254240:intron 30.0%
GATCATTGATATTCGAATCA+GGG + chr8_2:52271014-52271033 None:intergenic 30.0%
AGATCATTGATATTCGAATC+AGG + chr8_2:52271015-52271034 None:intergenic 30.0%
GAGATACAAGGAACAATAAA+TGG + chr8_2:52271163-52271182 None:intergenic 30.0%
! AGATATCAATAATTTGAGGC+AGG + chr8_2:52271473-52271492 None:intergenic 30.0%
TAATCTCATAGACAGATTCT+TGG - chr8_2:52271593-52271612 Msa1254240:CDS 30.0%
TGTTTGTAAGTAGCTATACA+TGG + chr8_2:52272590-52272609 None:intergenic 30.0%
TGAAACATAAAGAGCAACTT+TGG - chr8_2:52272654-52272673 Msa1254240:intron 30.0%
!!! TTTTGTTGTTCATGTTCCAT+AGG - chr8_2:52272753-52272772 Msa1254240:five_prime_UTR 30.0%
!! TAAAAGCATCAAATAAAGGG+GGG + chr8_2:52272854-52272873 None:intergenic 30.0%
AAGAAGAAAACGAGAATAAC+GGG + chr8_2:52268832-52268851 None:intergenic 30.0%
GAAGAAGAAAACGAGAATAA+CGG + chr8_2:52268833-52268852 None:intergenic 30.0%
!!! TTTTTTCTTCTTCTGGGTTT+TGG - chr8_2:52268918-52268937 Msa1254240:three_prime_UTR 30.0%
GTTATGCCAAGAAAATTTCA+AGG - chr8_2:52269054-52269073 Msa1254240:three_prime_UTR 30.0%
TGATTGGAACATAAAGGAAA+AGG - chr8_2:52269093-52269112 Msa1254240:three_prime_UTR 30.0%
! ATCAATCAGAATTTTGTGCA+TGG - chr8_2:52269291-52269310 Msa1254240:CDS 30.0%
TGAGATTTGTGAAAAGAAAC+AGG - chr8_2:52269496-52269515 Msa1254240:intron 30.0%
GGAAACATTTGATCGAAAAT+TGG - chr8_2:52269590-52269609 Msa1254240:CDS 30.0%
CACTTGACAATAAAGTAACA+TGG + chr8_2:52269644-52269663 None:intergenic 30.0%
! TGGTGTTTTCAATTGTAGAT+TGG - chr8_2:52269828-52269847 Msa1254240:CDS 30.0%
AAATTTAATGCCATAGACCA+TGG - chr8_2:52269945-52269964 Msa1254240:intron 30.0%
!!! TGTTGATTGATGCTGATTTT+TGG - chr8_2:52270012-52270031 Msa1254240:CDS 30.0%
!!! GTTGATTGATGCTGATTTTT+GGG - chr8_2:52270013-52270032 Msa1254240:CDS 30.0%
!!! TTGATTGATGCTGATTTTTG+GGG - chr8_2:52270014-52270033 Msa1254240:CDS 30.0%
TAACTTGAGTTCATCATCAA+TGG + chr8_2:52270314-52270333 None:intergenic 30.0%
TCTTCCTAAAAAGTAGTACA+CGG + chr8_2:52270476-52270495 None:intergenic 30.0%
TCACAAAACTAACTTCTATC+AGG + chr8_2:52270659-52270678 None:intergenic 30.0%
!!! CATTAGTCTGCTTTTTTGTA+TGG - chr8_2:52270708-52270727 Msa1254240:intron 30.0%
AACTTGCAAGTTGTAAAACT+TGG - chr8_2:52270856-52270875 Msa1254240:intron 30.0%
! GAGGTTGATTATCTTTACAA+TGG - chr8_2:52270959-52270978 Msa1254240:intron 30.0%
GATCATTGATATTCGAATCA+GGG + chr8_2:52271014-52271033 None:intergenic 30.0%
AGATCATTGATATTCGAATC+AGG + chr8_2:52271015-52271034 None:intergenic 30.0%
GAGATACAAGGAACAATAAA+TGG + chr8_2:52271163-52271182 None:intergenic 30.0%
! AGATATCAATAATTTGAGGC+AGG + chr8_2:52271473-52271492 None:intergenic 30.0%
TAATCTCATAGACAGATTCT+TGG - chr8_2:52271593-52271612 Msa1254240:CDS 30.0%
TGTTTGTAAGTAGCTATACA+TGG + chr8_2:52272590-52272609 None:intergenic 30.0%
TGAAACATAAAGAGCAACTT+TGG - chr8_2:52272654-52272673 Msa1254240:intron 30.0%
!!! TTTTGTTGTTCATGTTCCAT+AGG - chr8_2:52272753-52272772 Msa1254240:five_prime_UTR 30.0%
!! TAAAAGCATCAAATAAAGGG+GGG + chr8_2:52272854-52272873 None:intergenic 30.0%
TAAGGGAAAGAACAACAACA+TGG - chr8_2:52268999-52269018 Msa1254240:three_prime_UTR 35.0%
TTTAGGAGGAATGAATCAAG+TGG - chr8_2:52269218-52269237 Msa1254240:CDS 35.0%
TTAGGAGGAATGAATCAAGT+GGG - chr8_2:52269219-52269238 Msa1254240:CDS 35.0%
TGAAATTGAATGGCATGGAA+TGG - chr8_2:52269782-52269801 Msa1254240:CDS 35.0%
TTGTAGATTGGTGCAGATTA+AGG - chr8_2:52269840-52269859 Msa1254240:CDS 35.0%
CATTTGACATTTCAGTACCA+TGG + chr8_2:52269965-52269984 None:intergenic 35.0%
CCAAACTCATTCGAATTCAA+TGG + chr8_2:52270280-52270299 None:intergenic 35.0%
CCATTGAATTCGAATGAGTT+TGG - chr8_2:52270277-52270296 Msa1254240:intron 35.0%
!!! GTGTACTACTTTTTAGGAAG+AGG - chr8_2:52270475-52270494 Msa1254240:intron 35.0%
!! TTTTTAGGAAGAGGTTGAGA+TGG - chr8_2:52270484-52270503 Msa1254240:intron 35.0%
! TATAGAGGGAGAGATGATTT+TGG - chr8_2:52270511-52270530 Msa1254240:intron 35.0%
!! AAACAATTCTCTTGCTGTTG+TGG - chr8_2:52270553-52270572 Msa1254240:intron 35.0%
CAATCTTTCTGTAGTAAGCA+TGG + chr8_2:52270595-52270614 None:intergenic 35.0%
TGCTTACTACAGAAAGATTG+AGG - chr8_2:52270595-52270614 Msa1254240:intron 35.0%
!! ATTGAGGTACCGGATTATAT+TGG - chr8_2:52270611-52270630 Msa1254240:intron 35.0%
AATTCAATCACTGTCAAGTG+TGG + chr8_2:52270798-52270817 None:intergenic 35.0%
ATTGATATTCGAATCAGGGT+TGG + chr8_2:52271010-52271029 None:intergenic 35.0%
GACGACATATATTGCAGATT+TGG + chr8_2:52271053-52271072 None:intergenic 35.0%
TGAACACTATCTATCAAGTG+TGG + chr8_2:52271105-52271124 None:intergenic 35.0%
GCAGTAAAGTATGAGATACA+AGG + chr8_2:52271175-52271194 None:intergenic 35.0%
ATGCTTGCTTGATTGATATC+AGG - chr8_2:52271524-52271543 Msa1254240:intron 35.0%
TGTAAGAAAGAAACTTCAGC+TGG - chr8_2:52271629-52271648 Msa1254240:intron 35.0%
AAGGAAAGACATTCTCGAAA+TGG - chr8_2:52271746-52271765 Msa1254240:intron 35.0%
CTCATGAAAACATAAGCAGT+TGG + chr8_2:52271910-52271929 None:intergenic 35.0%
! CTGCTTATGTTTTCATGAGA+AGG - chr8_2:52271911-52271930 Msa1254240:intron 35.0%
TTTCATGAGAAGGTTTCTGA+AGG - chr8_2:52271921-52271940 Msa1254240:intron 35.0%
!!! TATTTTGAAACAGCTTGAGC+TGG - chr8_2:52272046-52272065 Msa1254240:intron 35.0%
TAGTGGCTAATTGAAAAGAG+AGG + chr8_2:52272256-52272275 None:intergenic 35.0%
! TCTCTTTTCAATTAGCCACT+AGG - chr8_2:52272255-52272274 Msa1254240:intron 35.0%
! CTCTTTTCAATTAGCCACTA+GGG - chr8_2:52272256-52272275 Msa1254240:intron 35.0%
TTAAAGCTAGGGTTTGCATA+TGG + chr8_2:52272366-52272385 None:intergenic 35.0%
AACTTTGGTTGCTTGTTCTA+GGG - chr8_2:52272669-52272688 Msa1254240:CDS 35.0%
TAAGGGAAAGAACAACAACA+TGG - chr8_2:52268999-52269018 Msa1254240:three_prime_UTR 35.0%
TTTAGGAGGAATGAATCAAG+TGG - chr8_2:52269218-52269237 Msa1254240:CDS 35.0%
TTAGGAGGAATGAATCAAGT+GGG - chr8_2:52269219-52269238 Msa1254240:CDS 35.0%
TGAAATTGAATGGCATGGAA+TGG - chr8_2:52269782-52269801 Msa1254240:CDS 35.0%
TTGTAGATTGGTGCAGATTA+AGG - chr8_2:52269840-52269859 Msa1254240:CDS 35.0%
CATTTGACATTTCAGTACCA+TGG + chr8_2:52269965-52269984 None:intergenic 35.0%
CCAAACTCATTCGAATTCAA+TGG + chr8_2:52270280-52270299 None:intergenic 35.0%
CCATTGAATTCGAATGAGTT+TGG - chr8_2:52270277-52270296 Msa1254240:intron 35.0%
!!! GTGTACTACTTTTTAGGAAG+AGG - chr8_2:52270475-52270494 Msa1254240:intron 35.0%
!! TTTTTAGGAAGAGGTTGAGA+TGG - chr8_2:52270484-52270503 Msa1254240:intron 35.0%
! TATAGAGGGAGAGATGATTT+TGG - chr8_2:52270511-52270530 Msa1254240:intron 35.0%
!! AAACAATTCTCTTGCTGTTG+TGG - chr8_2:52270553-52270572 Msa1254240:intron 35.0%
CAATCTTTCTGTAGTAAGCA+TGG + chr8_2:52270595-52270614 None:intergenic 35.0%
TGCTTACTACAGAAAGATTG+AGG - chr8_2:52270595-52270614 Msa1254240:intron 35.0%
!! ATTGAGGTACCGGATTATAT+TGG - chr8_2:52270611-52270630 Msa1254240:intron 35.0%
AATTCAATCACTGTCAAGTG+TGG + chr8_2:52270798-52270817 None:intergenic 35.0%
ATTGATATTCGAATCAGGGT+TGG + chr8_2:52271010-52271029 None:intergenic 35.0%
GACGACATATATTGCAGATT+TGG + chr8_2:52271053-52271072 None:intergenic 35.0%
TGAACACTATCTATCAAGTG+TGG + chr8_2:52271105-52271124 None:intergenic 35.0%
GCAGTAAAGTATGAGATACA+AGG + chr8_2:52271175-52271194 None:intergenic 35.0%
ATGCTTGCTTGATTGATATC+AGG - chr8_2:52271524-52271543 Msa1254240:intron 35.0%
TGTAAGAAAGAAACTTCAGC+TGG - chr8_2:52271629-52271648 Msa1254240:intron 35.0%
AAGGAAAGACATTCTCGAAA+TGG - chr8_2:52271746-52271765 Msa1254240:intron 35.0%
CTCATGAAAACATAAGCAGT+TGG + chr8_2:52271910-52271929 None:intergenic 35.0%
! CTGCTTATGTTTTCATGAGA+AGG - chr8_2:52271911-52271930 Msa1254240:intron 35.0%
TTTCATGAGAAGGTTTCTGA+AGG - chr8_2:52271921-52271940 Msa1254240:intron 35.0%
!!! TATTTTGAAACAGCTTGAGC+TGG - chr8_2:52272046-52272065 Msa1254240:intron 35.0%
TAGTGGCTAATTGAAAAGAG+AGG + chr8_2:52272256-52272275 None:intergenic 35.0%
! TCTCTTTTCAATTAGCCACT+AGG - chr8_2:52272255-52272274 Msa1254240:intron 35.0%
! CTCTTTTCAATTAGCCACTA+GGG - chr8_2:52272256-52272275 Msa1254240:intron 35.0%
TTAAAGCTAGGGTTTGCATA+TGG + chr8_2:52272366-52272385 None:intergenic 35.0%
AACTTTGGTTGCTTGTTCTA+GGG - chr8_2:52272669-52272688 Msa1254240:CDS 35.0%
!!! TCTTCTGGGTTTTGGATTCT+TGG - chr8_2:52268926-52268945 Msa1254240:three_prime_UTR 40.0%
!!! CTTCTGGGTTTTGGATTCTT+GGG - chr8_2:52268927-52268946 Msa1254240:three_prime_UTR 40.0%
!! TGGATTCTTGGGTTGAATCT+TGG - chr8_2:52268938-52268957 Msa1254240:three_prime_UTR 40.0%
!! GGATTCTTGGGTTGAATCTT+GGG - chr8_2:52268939-52268958 Msa1254240:three_prime_UTR 40.0%
! TTTTCTTGGCATAACTGCGT+TGG + chr8_2:52269049-52269068 None:intergenic 40.0%
!! ATGGTGGTGGAAGAATTGTT+GGG - chr8_2:52269244-52269263 Msa1254240:CDS 40.0%
!! AGAACAGAAGAGCTTTAGGA+GGG - chr8_2:52269268-52269287 Msa1254240:CDS 40.0%
TTGTGTACAACACAAGGGTA+AGG + chr8_2:52269321-52269340 None:intergenic 40.0%
TGAAAAGAAACAGGCTGATC+TGG - chr8_2:52269505-52269524 Msa1254240:CDS 40.0%
GAAAAGAAACAGGCTGATCT+GGG - chr8_2:52269506-52269525 Msa1254240:CDS 40.0%
TCAAACATGTAGATTGGTGC+TGG - chr8_2:52269684-52269703 Msa1254240:intron 40.0%
CATTTCAGTACCATGGTCTA+TGG + chr8_2:52269958-52269977 None:intergenic 40.0%
AAGAGAAACTACCTCAGCAT+AGG + chr8_2:52270155-52270174 None:intergenic 40.0%
TCAGTATGCTCCAAAGTCAT+AGG + chr8_2:52270355-52270374 None:intergenic 40.0%
TCAAGTGGATCACTATGCAT+TGG + chr8_2:52270379-52270398 None:intergenic 40.0%
!!! TTCGCCGTGTACTACTTTTT+AGG - chr8_2:52270469-52270488 Msa1254240:intron 40.0%
GTTGAGATGGAGGATATAGA+GGG - chr8_2:52270497-52270516 Msa1254240:intron 40.0%
CTACAGAAAGATTGAGGTAC+CGG - chr8_2:52270601-52270620 Msa1254240:intron 40.0%
! TTGCGCTTTTGCATGTAAAG+CGG - chr8_2:52270763-52270782 Msa1254240:intron 40.0%
CTATCCAATGATTCCGAGAT+AGG - chr8_2:52271194-52271213 Msa1254240:CDS 40.0%
TTCACCTATCTCGGAATCAT+TGG + chr8_2:52271201-52271220 None:intergenic 40.0%
ATTACCTTCCTGCAGTATCT+TGG - chr8_2:52271349-52271368 Msa1254240:CDS 40.0%
AGTTGTTCATCCATGTAGGT+TGG + chr8_2:52271385-52271404 None:intergenic 40.0%
! GTCAAGTTGTTCATCCATGT+AGG + chr8_2:52271389-52271408 None:intergenic 40.0%
AACAACTTGACCTCAATGAG+AGG - chr8_2:52271398-52271417 Msa1254240:CDS 40.0%
AGAAAGAAACTTCAGCTGGT+TGG - chr8_2:52271633-52271652 Msa1254240:intron 40.0%
ATACTTGCATGCCAAAAGCA+TGG + chr8_2:52271667-52271686 None:intergenic 40.0%
TGTAAGCTCTGTCAGCTATA+TGG + chr8_2:52271725-52271744 None:intergenic 40.0%
GATTTCTTTCCAAACACCGT+AGG - chr8_2:52271843-52271862 Msa1254240:intron 40.0%
TTTCTTGGTTGAGCTATCTC+TGG - chr8_2:52272076-52272095 Msa1254240:intron 40.0%
!! TGCAAACCCTAGCTTTAACA+TGG - chr8_2:52272368-52272387 Msa1254240:intron 40.0%
TCAGTGCCATGTTAAAGCTA+GGG + chr8_2:52272377-52272396 None:intergenic 40.0%
ATCAGTGCCATGTTAAAGCT+AGG + chr8_2:52272378-52272397 None:intergenic 40.0%
! TGAACCAGCATGTTTTCTTC+TGG - chr8_2:52272531-52272550 Msa1254240:intron 40.0%
TTCTCCAGAAGAAAACATGC+TGG + chr8_2:52272538-52272557 None:intergenic 40.0%
AAATCAGCAGCACACGTATA+TGG + chr8_2:52272616-52272635 None:intergenic 40.0%
!!! TATACGTGTGCTGCTGATTT+TGG - chr8_2:52272616-52272635 Msa1254240:intron 40.0%
!!! ATACGTGTGCTGCTGATTTT+GGG - chr8_2:52272617-52272636 Msa1254240:intron 40.0%
CAACTTTGGTTGCTTGTTCT+AGG - chr8_2:52272668-52272687 Msa1254240:CDS 40.0%
!!! TCTTCTGGGTTTTGGATTCT+TGG - chr8_2:52268926-52268945 Msa1254240:three_prime_UTR 40.0%
!!! CTTCTGGGTTTTGGATTCTT+GGG - chr8_2:52268927-52268946 Msa1254240:three_prime_UTR 40.0%
!! TGGATTCTTGGGTTGAATCT+TGG - chr8_2:52268938-52268957 Msa1254240:three_prime_UTR 40.0%
!! GGATTCTTGGGTTGAATCTT+GGG - chr8_2:52268939-52268958 Msa1254240:three_prime_UTR 40.0%
! TTTTCTTGGCATAACTGCGT+TGG + chr8_2:52269049-52269068 None:intergenic 40.0%
!! ATGGTGGTGGAAGAATTGTT+GGG - chr8_2:52269244-52269263 Msa1254240:CDS 40.0%
!! AGAACAGAAGAGCTTTAGGA+GGG - chr8_2:52269268-52269287 Msa1254240:CDS 40.0%
TTGTGTACAACACAAGGGTA+AGG + chr8_2:52269321-52269340 None:intergenic 40.0%
TGAAAAGAAACAGGCTGATC+TGG - chr8_2:52269505-52269524 Msa1254240:CDS 40.0%
GAAAAGAAACAGGCTGATCT+GGG - chr8_2:52269506-52269525 Msa1254240:CDS 40.0%
TCAAACATGTAGATTGGTGC+TGG - chr8_2:52269684-52269703 Msa1254240:intron 40.0%
CATTTCAGTACCATGGTCTA+TGG + chr8_2:52269958-52269977 None:intergenic 40.0%
AAGAGAAACTACCTCAGCAT+AGG + chr8_2:52270155-52270174 None:intergenic 40.0%
TCAGTATGCTCCAAAGTCAT+AGG + chr8_2:52270355-52270374 None:intergenic 40.0%
TCAAGTGGATCACTATGCAT+TGG + chr8_2:52270379-52270398 None:intergenic 40.0%
!!! TTCGCCGTGTACTACTTTTT+AGG - chr8_2:52270469-52270488 Msa1254240:intron 40.0%
GTTGAGATGGAGGATATAGA+GGG - chr8_2:52270497-52270516 Msa1254240:intron 40.0%
CTACAGAAAGATTGAGGTAC+CGG - chr8_2:52270601-52270620 Msa1254240:intron 40.0%
! TTGCGCTTTTGCATGTAAAG+CGG - chr8_2:52270763-52270782 Msa1254240:intron 40.0%
CTATCCAATGATTCCGAGAT+AGG - chr8_2:52271194-52271213 Msa1254240:CDS 40.0%
TTCACCTATCTCGGAATCAT+TGG + chr8_2:52271201-52271220 None:intergenic 40.0%
ATTACCTTCCTGCAGTATCT+TGG - chr8_2:52271349-52271368 Msa1254240:CDS 40.0%
AGTTGTTCATCCATGTAGGT+TGG + chr8_2:52271385-52271404 None:intergenic 40.0%
! GTCAAGTTGTTCATCCATGT+AGG + chr8_2:52271389-52271408 None:intergenic 40.0%
AACAACTTGACCTCAATGAG+AGG - chr8_2:52271398-52271417 Msa1254240:CDS 40.0%
AGAAAGAAACTTCAGCTGGT+TGG - chr8_2:52271633-52271652 Msa1254240:intron 40.0%
ATACTTGCATGCCAAAAGCA+TGG + chr8_2:52271667-52271686 None:intergenic 40.0%
TGTAAGCTCTGTCAGCTATA+TGG + chr8_2:52271725-52271744 None:intergenic 40.0%
GATTTCTTTCCAAACACCGT+AGG - chr8_2:52271843-52271862 Msa1254240:intron 40.0%
TTTCTTGGTTGAGCTATCTC+TGG - chr8_2:52272076-52272095 Msa1254240:intron 40.0%
!! TGCAAACCCTAGCTTTAACA+TGG - chr8_2:52272368-52272387 Msa1254240:intron 40.0%
TCAGTGCCATGTTAAAGCTA+GGG + chr8_2:52272377-52272396 None:intergenic 40.0%
ATCAGTGCCATGTTAAAGCT+AGG + chr8_2:52272378-52272397 None:intergenic 40.0%
! TGAACCAGCATGTTTTCTTC+TGG - chr8_2:52272531-52272550 Msa1254240:intron 40.0%
TTCTCCAGAAGAAAACATGC+TGG + chr8_2:52272538-52272557 None:intergenic 40.0%
AAATCAGCAGCACACGTATA+TGG + chr8_2:52272616-52272635 None:intergenic 40.0%
!!! TATACGTGTGCTGCTGATTT+TGG - chr8_2:52272616-52272635 Msa1254240:intron 40.0%
!!! ATACGTGTGCTGCTGATTTT+GGG - chr8_2:52272617-52272636 Msa1254240:intron 40.0%
CAACTTTGGTTGCTTGTTCT+AGG - chr8_2:52272668-52272687 Msa1254240:CDS 40.0%
CTAGTGTCAGTGAATGCTAG+TGG - chr8_2:52268871-52268890 Msa1254240:three_prime_UTR 45.0%
GGAATGAATCAAGTGGGTCA+TGG - chr8_2:52269225-52269244 Msa1254240:CDS 45.0%
ATGAATCAAGTGGGTCATGG+TGG - chr8_2:52269228-52269247 Msa1254240:CDS 45.0%
!! CATGGTGGTGGAAGAATTGT+TGG - chr8_2:52269243-52269262 Msa1254240:CDS 45.0%
!! CAGAACAGAAGAGCTTTAGG+AGG - chr8_2:52269267-52269286 Msa1254240:CDS 45.0%
ACCCTTGTGTTGTACACAAG+AGG - chr8_2:52269322-52269341 Msa1254240:intron 45.0%
CCCTCTTGTGTACAACACAA+GGG + chr8_2:52269326-52269345 None:intergenic 45.0%
CCCTTGTGTTGTACACAAGA+GGG - chr8_2:52269323-52269342 Msa1254240:intron 45.0%
ACCCTCTTGTGTACAACACA+AGG + chr8_2:52269327-52269346 None:intergenic 45.0%
CATCATCCTCACCTTGTGAT+GGG + chr8_2:52269539-52269558 None:intergenic 45.0%
!! AGGTTTGCTGCACAAATTGC+TGG - chr8_2:52270118-52270137 Msa1254240:CDS 45.0%
GAGTTCATCATCAATGGCGA+TGG + chr8_2:52270308-52270327 None:intergenic 45.0%
GCATAGTGATCCACTTGAGA+TGG - chr8_2:52270381-52270400 Msa1254240:intron 45.0%
TTAGGAAGAGGTTGAGATGG+AGG - chr8_2:52270487-52270506 Msa1254240:intron 45.0%
GGTTGAGATGGAGGATATAG+AGG - chr8_2:52270496-52270515 Msa1254240:intron 45.0%
AAACACAGCCAAGATACTGC+AGG + chr8_2:52271360-52271379 None:intergenic 45.0%
CTGTGTTTCACCAACCTACA+TGG - chr8_2:52271372-52271391 Msa1254240:CDS 45.0%
TTGACCTCAATGAGAGGATG+AGG - chr8_2:52271404-52271423 Msa1254240:CDS 45.0%
TGACCTCAATGAGAGGATGA+GGG - chr8_2:52271405-52271424 Msa1254240:CDS 45.0%
TGAGGGCTATACTAGTTGAC+TGG - chr8_2:52271422-52271441 Msa1254240:CDS 45.0%
! ACTAGTTGACTGGCTGATTG+AGG - chr8_2:52271432-52271451 Msa1254240:CDS 45.0%
GAAACAGTGTCTCTTGCATG+AGG + chr8_2:52271566-52271585 None:intergenic 45.0%
!!! TGGTCTTGTTGCCATGCTTT+TGG - chr8_2:52271653-52271672 Msa1254240:intron 45.0%
! GCTTTTGGCATGCAAGTATG+AGG - chr8_2:52271668-52271687 Msa1254240:intron 45.0%
! AGTTTCTGTGCCTGTCGTTT+CGG - chr8_2:52271692-52271711 Msa1254240:intron 45.0%
TAGCTGACAGAGCTTACACA+AGG - chr8_2:52271727-52271746 Msa1254240:intron 45.0%
!! TTGAGCATCGACTTCTCCTA+CGG + chr8_2:52271862-52271881 None:intergenic 45.0%
! TTTGAAACAGCTTGAGCTGG+TGG - chr8_2:52272049-52272068 Msa1254240:intron 45.0%
!!! TGAGCTGGTGGCTTTTTTCT+TGG - chr8_2:52272061-52272080 Msa1254240:intron 45.0%
CTGTCAGTGGTTTCAAACAC+TGG - chr8_2:52272168-52272187 Msa1254240:intron 45.0%
TTATCGAAACAGTGCCCTAG+TGG + chr8_2:52272273-52272292 None:intergenic 45.0%
!! TAGAGAGTGCTCTATGCTGA+TGG - chr8_2:52272420-52272439 Msa1254240:CDS 45.0%
GTTGGATTTCACCAGAAAGC+CGG - chr8_2:52272442-52272461 Msa1254240:CDS 45.0%
AACAAGAACCAGCCATAGGA+AGG - chr8_2:52272556-52272575 Msa1254240:intron 45.0%
!!! TACGTGTGCTGCTGATTTTG+GGG - chr8_2:52272618-52272637 Msa1254240:intron 45.0%
!! GGTTGCTTGTTCTAGGGAAA+TGG - chr8_2:52272675-52272694 Msa1254240:CDS 45.0%
CTAGTGTCAGTGAATGCTAG+TGG - chr8_2:52268871-52268890 Msa1254240:three_prime_UTR 45.0%
GGAATGAATCAAGTGGGTCA+TGG - chr8_2:52269225-52269244 Msa1254240:CDS 45.0%
ATGAATCAAGTGGGTCATGG+TGG - chr8_2:52269228-52269247 Msa1254240:CDS 45.0%
!! CATGGTGGTGGAAGAATTGT+TGG - chr8_2:52269243-52269262 Msa1254240:CDS 45.0%
!! CAGAACAGAAGAGCTTTAGG+AGG - chr8_2:52269267-52269286 Msa1254240:CDS 45.0%
ACCCTTGTGTTGTACACAAG+AGG - chr8_2:52269322-52269341 Msa1254240:intron 45.0%
CCCTCTTGTGTACAACACAA+GGG + chr8_2:52269326-52269345 None:intergenic 45.0%
CCCTTGTGTTGTACACAAGA+GGG - chr8_2:52269323-52269342 Msa1254240:intron 45.0%
ACCCTCTTGTGTACAACACA+AGG + chr8_2:52269327-52269346 None:intergenic 45.0%
CATCATCCTCACCTTGTGAT+GGG + chr8_2:52269539-52269558 None:intergenic 45.0%
!! AGGTTTGCTGCACAAATTGC+TGG - chr8_2:52270118-52270137 Msa1254240:CDS 45.0%
GAGTTCATCATCAATGGCGA+TGG + chr8_2:52270308-52270327 None:intergenic 45.0%
GCATAGTGATCCACTTGAGA+TGG - chr8_2:52270381-52270400 Msa1254240:intron 45.0%
TTAGGAAGAGGTTGAGATGG+AGG - chr8_2:52270487-52270506 Msa1254240:intron 45.0%
GGTTGAGATGGAGGATATAG+AGG - chr8_2:52270496-52270515 Msa1254240:intron 45.0%
AAACACAGCCAAGATACTGC+AGG + chr8_2:52271360-52271379 None:intergenic 45.0%
CTGTGTTTCACCAACCTACA+TGG - chr8_2:52271372-52271391 Msa1254240:CDS 45.0%
TTGACCTCAATGAGAGGATG+AGG - chr8_2:52271404-52271423 Msa1254240:CDS 45.0%
TGACCTCAATGAGAGGATGA+GGG - chr8_2:52271405-52271424 Msa1254240:CDS 45.0%
TGAGGGCTATACTAGTTGAC+TGG - chr8_2:52271422-52271441 Msa1254240:CDS 45.0%
! ACTAGTTGACTGGCTGATTG+AGG - chr8_2:52271432-52271451 Msa1254240:CDS 45.0%
GAAACAGTGTCTCTTGCATG+AGG + chr8_2:52271566-52271585 None:intergenic 45.0%
!!! TGGTCTTGTTGCCATGCTTT+TGG - chr8_2:52271653-52271672 Msa1254240:intron 45.0%
! GCTTTTGGCATGCAAGTATG+AGG - chr8_2:52271668-52271687 Msa1254240:intron 45.0%
! AGTTTCTGTGCCTGTCGTTT+CGG - chr8_2:52271692-52271711 Msa1254240:intron 45.0%
TAGCTGACAGAGCTTACACA+AGG - chr8_2:52271727-52271746 Msa1254240:intron 45.0%
!! TTGAGCATCGACTTCTCCTA+CGG + chr8_2:52271862-52271881 None:intergenic 45.0%
! TTTGAAACAGCTTGAGCTGG+TGG - chr8_2:52272049-52272068 Msa1254240:intron 45.0%
!!! TGAGCTGGTGGCTTTTTTCT+TGG - chr8_2:52272061-52272080 Msa1254240:intron 45.0%
CTGTCAGTGGTTTCAAACAC+TGG - chr8_2:52272168-52272187 Msa1254240:intron 45.0%
TTATCGAAACAGTGCCCTAG+TGG + chr8_2:52272273-52272292 None:intergenic 45.0%
!! TAGAGAGTGCTCTATGCTGA+TGG - chr8_2:52272420-52272439 Msa1254240:CDS 45.0%
GTTGGATTTCACCAGAAAGC+CGG - chr8_2:52272442-52272461 Msa1254240:CDS 45.0%
AACAAGAACCAGCCATAGGA+AGG - chr8_2:52272556-52272575 Msa1254240:intron 45.0%
!!! TACGTGTGCTGCTGATTTTG+GGG - chr8_2:52272618-52272637 Msa1254240:intron 45.0%
!! GGTTGCTTGTTCTAGGGAAA+TGG - chr8_2:52272675-52272694 Msa1254240:CDS 45.0%
!!! ATAATCATATTAAAATTTTA+AGG - chr8_2:52268981-52269000 Msa1254240:three_prime_UTR 5.0%
!!! TAATCATATTAAAATTTTAA+GGG - chr8_2:52268982-52269001 Msa1254240:three_prime_UTR 5.0%
!!! ATAATCATATTAAAATTTTA+AGG - chr8_2:52268981-52269000 Msa1254240:three_prime_UTR 5.0%
!!! TAATCATATTAAAATTTTAA+GGG - chr8_2:52268982-52269001 Msa1254240:three_prime_UTR 5.0%
AATCAAGTGGGTCATGGTGG+TGG - chr8_2:52269231-52269250 Msa1254240:CDS 50.0%
GGGCAGAACAGAAGAGCTTT+AGG - chr8_2:52269264-52269283 Msa1254240:CDS 50.0%
TGGGACATAGACCCATCACA+AGG - chr8_2:52269525-52269544 Msa1254240:CDS 50.0%
CATAGACCCATCACAAGGTG+AGG - chr8_2:52269530-52269549 Msa1254240:CDS 50.0%
GCATCATCCTCACCTTGTGA+TGG + chr8_2:52269540-52269559 None:intergenic 50.0%
CTCACAGCAATCCTATGCTG+AGG - chr8_2:52270141-52270160 Msa1254240:CDS 50.0%
!! ATAGGCTCTGGTTGGTCTTC+TGG + chr8_2:52270337-52270356 None:intergenic 50.0%
! CCAAAGTCATAGGCTCTGGT+TGG + chr8_2:52270345-52270364 None:intergenic 50.0%
CCAACCAGAGCCTATGACTT+TGG - chr8_2:52270342-52270361 Msa1254240:CDS 50.0%
TGCTCCAAAGTCATAGGCTC+TGG + chr8_2:52270349-52270368 None:intergenic 50.0%
ACAGCCAAGATACTGCAGGA+AGG + chr8_2:52271356-52271375 None:intergenic 50.0%
TAGCCCTCATCCTCTCATTG+AGG + chr8_2:52271411-52271430 None:intergenic 50.0%
TGGATCAGATCCGAAACGAC+AGG + chr8_2:52271705-52271724 None:intergenic 50.0%
TCGACTTCTCCTACGGTGTT+TGG + chr8_2:52271855-52271874 None:intergenic 50.0%
CTTGGTTGAGCTATCTCTGG+TGG - chr8_2:52272079-52272098 Msa1254240:intron 50.0%
GCTGAAGTTTCCACCATCCT+TGG - chr8_2:52272112-52272131 Msa1254240:intron 50.0%
ACAGCTCAATGCACTGTCAG+TGG - chr8_2:52272155-52272174 Msa1254240:intron 50.0%
ACTGGAACAAGACATGCGAG+TGG - chr8_2:52272186-52272205 Msa1254240:intron 50.0%
GAGTGCTCTATGCTGATGGT+TGG - chr8_2:52272424-52272443 Msa1254240:CDS 50.0%
! ACGGGAGTGCATAGGAAGTA+TGG - chr8_2:52272478-52272497 Msa1254240:CDS 50.0%
GGAGAACAAGAACCAGCCAT+AGG - chr8_2:52272552-52272571 Msa1254240:intron 50.0%
! ATGGCTGACTCTCCTTCCTA+TGG + chr8_2:52272571-52272590 None:intergenic 50.0%
!!! ACGTGTGCTGCTGATTTTGG+GGG - chr8_2:52272619-52272638 Msa1254240:intron 50.0%
AATCAAGTGGGTCATGGTGG+TGG - chr8_2:52269231-52269250 Msa1254240:CDS 50.0%
GGGCAGAACAGAAGAGCTTT+AGG - chr8_2:52269264-52269283 Msa1254240:CDS 50.0%
TGGGACATAGACCCATCACA+AGG - chr8_2:52269525-52269544 Msa1254240:CDS 50.0%
CATAGACCCATCACAAGGTG+AGG - chr8_2:52269530-52269549 Msa1254240:CDS 50.0%
GCATCATCCTCACCTTGTGA+TGG + chr8_2:52269540-52269559 None:intergenic 50.0%
CTCACAGCAATCCTATGCTG+AGG - chr8_2:52270141-52270160 Msa1254240:CDS 50.0%
!! ATAGGCTCTGGTTGGTCTTC+TGG + chr8_2:52270337-52270356 None:intergenic 50.0%
! CCAAAGTCATAGGCTCTGGT+TGG + chr8_2:52270345-52270364 None:intergenic 50.0%
CCAACCAGAGCCTATGACTT+TGG - chr8_2:52270342-52270361 Msa1254240:CDS 50.0%
TGCTCCAAAGTCATAGGCTC+TGG + chr8_2:52270349-52270368 None:intergenic 50.0%
ACAGCCAAGATACTGCAGGA+AGG + chr8_2:52271356-52271375 None:intergenic 50.0%
TAGCCCTCATCCTCTCATTG+AGG + chr8_2:52271411-52271430 None:intergenic 50.0%
TGGATCAGATCCGAAACGAC+AGG + chr8_2:52271705-52271724 None:intergenic 50.0%
TCGACTTCTCCTACGGTGTT+TGG + chr8_2:52271855-52271874 None:intergenic 50.0%
CTTGGTTGAGCTATCTCTGG+TGG - chr8_2:52272079-52272098 Msa1254240:intron 50.0%
GCTGAAGTTTCCACCATCCT+TGG - chr8_2:52272112-52272131 Msa1254240:intron 50.0%
ACAGCTCAATGCACTGTCAG+TGG - chr8_2:52272155-52272174 Msa1254240:intron 50.0%
ACTGGAACAAGACATGCGAG+TGG - chr8_2:52272186-52272205 Msa1254240:intron 50.0%
GAGTGCTCTATGCTGATGGT+TGG - chr8_2:52272424-52272443 Msa1254240:CDS 50.0%
! ACGGGAGTGCATAGGAAGTA+TGG - chr8_2:52272478-52272497 Msa1254240:CDS 50.0%
GGAGAACAAGAACCAGCCAT+AGG - chr8_2:52272552-52272571 Msa1254240:intron 50.0%
! ATGGCTGACTCTCCTTCCTA+TGG + chr8_2:52272571-52272590 None:intergenic 50.0%
!!! ACGTGTGCTGCTGATTTTGG+GGG - chr8_2:52272619-52272638 Msa1254240:intron 50.0%
TTTCACCAGAAAGCCGGAGC+CGG - chr8_2:52272448-52272467 Msa1254240:CDS 55.0%
ATGCACTCCCGTCAGTTTCC+CGG + chr8_2:52272470-52272489 None:intergenic 55.0%
! GGAAACTGACGGGAGTGCAT+AGG - chr8_2:52272470-52272489 Msa1254240:CDS 55.0%
CTGACTCTCCTTCCTATGGC+TGG + chr8_2:52272567-52272586 None:intergenic 55.0%
!!! CGTGTGCTGCTGATTTTGGG+GGG - chr8_2:52272620-52272639 Msa1254240:intron 55.0%
TTTCACCAGAAAGCCGGAGC+CGG - chr8_2:52272448-52272467 Msa1254240:CDS 55.0%
ATGCACTCCCGTCAGTTTCC+CGG + chr8_2:52272470-52272489 None:intergenic 55.0%
! GGAAACTGACGGGAGTGCAT+AGG - chr8_2:52272470-52272489 Msa1254240:CDS 55.0%
CTGACTCTCCTTCCTATGGC+TGG + chr8_2:52272567-52272586 None:intergenic 55.0%
!!! CGTGTGCTGCTGATTTTGGG+GGG - chr8_2:52272620-52272639 Msa1254240:intron 55.0%
GCAGCAGCAACCAAGGATGG+TGG + chr8_2:52272125-52272144 None:intergenic 60.0%
GCAGCAGCAGCAACCAAGGA+TGG + chr8_2:52272128-52272147 None:intergenic 60.0%
GACAGCAGCAGCAGCAACCA+AGG + chr8_2:52272132-52272151 None:intergenic 60.0%
TTCACCAGAAAGCCGGAGCC+GGG - chr8_2:52272449-52272468 Msa1254240:CDS 60.0%
GCAGCAGCAACCAAGGATGG+TGG + chr8_2:52272125-52272144 None:intergenic 60.0%
GCAGCAGCAGCAACCAAGGA+TGG + chr8_2:52272128-52272147 None:intergenic 60.0%
GACAGCAGCAGCAGCAACCA+AGG + chr8_2:52272132-52272151 None:intergenic 60.0%
TTCACCAGAAAGCCGGAGCC+GGG - chr8_2:52272449-52272468 Msa1254240:CDS 60.0%
GTTTCCCGGCTCCGGCTTTC+TGG + chr8_2:52272456-52272475 None:intergenic 65.0%
AGCCGGAGCCGGGAAACTGA+CGG - chr8_2:52272459-52272478 Msa1254240:CDS 65.0%
TCCCGTCAGTTTCCCGGCTC+CGG + chr8_2:52272464-52272483 None:intergenic 65.0%
GTTTCCCGGCTCCGGCTTTC+TGG + chr8_2:52272456-52272475 None:intergenic 65.0%
AGCCGGAGCCGGGAAACTGA+CGG - chr8_2:52272459-52272478 Msa1254240:CDS 65.0%
TCCCGTCAGTTTCCCGGCTC+CGG + chr8_2:52272464-52272483 None:intergenic 65.0%
GCCGGAGCCGGGAAACTGAC+GGG - chr8_2:52272460-52272479 Msa1254240:CDS 70.0%
GCCGGAGCCGGGAAACTGAC+GGG - chr8_2:52272460-52272479 Msa1254240:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 52268819 52272916 52268819 ID=Msa1254240;Name=Msa1254240
chr8_2 mRNA 52268819 52272916 52268819 ID=Msa1254240-mRNA-1;Parent=Msa1254240;Name=Msa1254240-mRNA-1;_AED=0.10;_eAED=0.10;_QI=199|1|1|1|1|1|11|343|433
chr8_2 exon 52268819 52269312 52268819 ID=Msa1254240-mRNA-1:exon:16004;Parent=Msa1254240-mRNA-1
chr8_2 exon 52269498 52269676 52269498 ID=Msa1254240-mRNA-1:exon:16003;Parent=Msa1254240-mRNA-1
chr8_2 exon 52269772 52269870 52269772 ID=Msa1254240-mRNA-1:exon:16002;Parent=Msa1254240-mRNA-1
chr8_2 exon 52269968 52270189 52269968 ID=Msa1254240-mRNA-1:exon:16001;Parent=Msa1254240-mRNA-1
chr8_2 exon 52270282 52270371 52270282 ID=Msa1254240-mRNA-1:exon:16000;Parent=Msa1254240-mRNA-1
chr8_2 exon 52271119 52271244 52271119 ID=Msa1254240-mRNA-1:exon:15999;Parent=Msa1254240-mRNA-1
chr8_2 exon 52271333 52271473 52271333 ID=Msa1254240-mRNA-1:exon:15998;Parent=Msa1254240-mRNA-1
chr8_2 exon 52271573 52271618 52271573 ID=Msa1254240-mRNA-1:exon:15997;Parent=Msa1254240-mRNA-1
chr8_2 exon 52272189 52272245 52272189 ID=Msa1254240-mRNA-1:exon:15996;Parent=Msa1254240-mRNA-1
chr8_2 exon 52272380 52272512 52272380 ID=Msa1254240-mRNA-1:exon:15995;Parent=Msa1254240-mRNA-1
chr8_2 exon 52272660 52272916 52272660 ID=Msa1254240-mRNA-1:exon:15994;Parent=Msa1254240-mRNA-1
chr8_2 five_prime_UTR 52272718 52272916 52272718 ID=Msa1254240-mRNA-1:five_prime_utr;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52272660 52272717 52272660 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52272380 52272512 52272380 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52272189 52272245 52272189 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52271573 52271618 52271573 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52271333 52271473 52271333 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52271119 52271244 52271119 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52270282 52270371 52270282 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52269968 52270189 52269968 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52269772 52269870 52269772 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52269498 52269676 52269498 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 CDS 52269162 52269312 52269162 ID=Msa1254240-mRNA-1:cds;Parent=Msa1254240-mRNA-1
chr8_2 three_prime_UTR 52268819 52269161 52268819 ID=Msa1254240-mRNA-1:three_prime_utr;Parent=Msa1254240-mRNA-1
Gene Sequence

>Msa1254240

ATGGTGAATACTTCTGAAGAGAACAATTCCAACGCAGTTATGCCAAGAAAATTTCAAGGAGGAATGAATCAAGTGGGTCATGGTGGTGGAAGAATTGTTGGGCAGAACAGAAGAGCTTTAGGAGGGATCAATCAGAATTTTGTGCATGGTCGACCTTACCCTTGTGTTGTACACAAGAGGGTGTTGTCTGAAAAACATGAGATTTGTGAAAAGAAACAGGCTGATCTGGGACATAGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTGGCTCACAGCAATCCTATGCTGAGAAAAAGAATTCAAATCCATTGAATTCGAATGAGTTTGGAAACTCCATCGCCATTGATGATGAACTCAAGTTACCAGAAGACCAACCAGAGCCTATGACTTTGGAGCATACTGAACCAATGCATAGTGATCCACTTGAGATGGAAGAGGTTGAGATGGAGGATATAGAGGGAGAGATGATTTTGGACATTGATAGCTGTGATGCAAACAATTCTCTTGCTGTTGTGGAGTATATTGAAGATCTCCATGCTTACTACAGAAAGATTGAGTATCTTGGCTGTGTTTCACCAACCTACATGGATGAACAACTTGACCTCAATGAGAGGATGAGGGCTATACTAGTTGACTGGCTGATTGAGGTTCATGACAAATTCGACCTCATGCAAGAGACACTGTTTCTTACAGTTAATCTCATAGACAGATTCTTGGCTAAGCAGAATGTTGTAAGAAAGAAACTTCAGCTGGTTGGTCTTGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTCGTTTCGGATCTGATCCATATAGCTGACAGAGCTTACACAAGGAAAGACATTCTCGAAATGGAGAAGTCGATGCTCAACACTCTGCAGTATAACATGTCTCTTCCAACTGCTTATGTTTTCATGAGAAGGTTTCTGAAGGCTGCTCAAGCTGACAAAAAACTTGAGCTGGTGGCTTTTTTCTTGGTTGAGCTATCTCTGGTGGAATATGAGATGCTGAAGTTTCCACCATCCTTGGTTGCTGCTGCTGCTGTCTACACAGCTCAATGCACTGTCAGTGGTTTCAAACACTGGAACAAGACATGCGAGTGGCACACAAACTACTCAGAAGATCAGCTGTTAGAGTGCTCTATGCTGATGGTTGGATTTCACCAGAAAGCCGGAGCCGGGAAACTGACGGGAGTGCATAGGAAGTATGGCTCAGCAAAATTTAGCTTCACTGCTAAATGTGAACCAGCATGTTTTCTTCTGGAGAACAAGAACCAGCCATAG
Protein sequence

>Msa1254240

MVNTSEENNSNAVMPRKFQGGMNQVGHGGGRIVGQNRRALGGINQNFVHGRPYPCVVHKRVLSEKHEICEKKQADLGHRPITRRFAAQIAGSQQSYAEKKNSNPLNSNEFGNSIAIDDELKLPEDQPEPMTLEHTEPMHSDPLEMEEVEMEDIEGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKHWNKTCEWHTNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGSAKFSFTAKCEPACFLLENKNQP*