AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0804000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804000 MtrunA17_Chr5g0411971 98.483 1055 15 1 1 1055 1 1054 0.0 2151
Msa0804000 MtrunA17_Chr5g0421521 95.943 912 33 2 26 937 1 908 0.0 1805
Msa0804000 MtrunA17_Chr5g0421591 97.356 870 22 1 26 895 1 869 0.0 1751
Msa0804000 MtrunA17_Chr2g0312631 54.437 586 236 7 243 818 241 805 0.0 607
Msa0804000 MtrunA17_Chr1g0191851 54.906 479 207 4 328 802 76 549 2.25e-173 527
Msa0804000 MtrunA17_Chr7g0272871 51.852 513 233 7 301 808 32 535 1.22e-165 505
Msa0804000 MtrunA17_Chr1g0195111 47.287 387 191 4 380 757 376 758 3.49e-106 355
Msa0804000 MtrunA17_Chr1g0192481 47.439 371 181 4 380 740 38 404 9.83e-104 337
Msa0804000 MtrunA17_Chr7g0271961 48.158 380 174 5 380 746 381 750 4.61e-102 344
Msa0804000 MtrunA17_Chr3g0102921 40.000 460 249 6 323 761 364 817 6.04e-96 329
Msa0804000 MtrunA17_Chr7g0257301 44.417 412 188 7 380 756 372 777 2.25e-95 327
Msa0804000 MtrunA17_Chr5g0447041 41.324 438 204 7 370 757 404 838 1.10e-93 323
Msa0804000 MtrunA17_Chr4g0042061 39.440 464 242 7 287 732 340 782 1.50e-90 307
Msa0804000 MtrunA17_Chr2g0319271 39.787 470 258 8 280 729 283 747 1.57e-88 301
Msa0804000 MtrunA17_Chr2g0280421 44.236 373 199 7 366 730 403 774 1.43e-83 288
Msa0804000 MtrunA17_Chr8g0369881 41.555 373 214 3 372 743 847 1216 2.43e-82 292
Msa0804000 MtrunA17_Chr5g0407791 40.148 406 232 5 372 775 861 1257 5.23e-82 291
Msa0804000 MtrunA17_Chr4g0049011 36.492 496 259 9 249 725 163 621 4.47e-81 277
Msa0804000 MtrunA17_Chr1g0191181 39.498 438 227 10 353 770 39 458 1.36e-79 273
Msa0804000 MtrunA17_Chr8g0367581 34.679 545 303 13 331 838 69 597 2.26e-68 250
Msa0804000 MtrunA17_Chr4g0045381 39.776 357 190 8 400 736 193 544 7.77e-62 231
Msa0804000 MtrunA17_Chr2g0327581 31.673 562 313 17 392 899 40 584 1.01e-60 226
Msa0804000 MtrunA17_Chr1g0182151 37.571 354 196 8 400 730 54 405 2.54e-60 224
Msa0804000 MtrunA17_Chr2g0322291 40.503 358 186 9 400 736 88 439 3.00e-60 226
Msa0804000 MtrunA17_Chr1g0178411 33.202 509 286 14 400 858 13 517 4.00e-57 214
Msa0804000 MtrunA17_Chr3g0132921 36.571 350 187 8 400 723 9 349 5.92e-57 206
Msa0804000 MtrunA17_Chr4g0069141 38.040 347 184 9 400 723 153 491 1.78e-56 214
Msa0804000 MtrunA17_Chr7g0266631 32.353 510 289 15 400 858 9 513 2.94e-56 212
Msa0804000 MtrunA17_Chr4g0062291 38.547 358 199 6 393 737 116 465 6.25e-56 207
Msa0804000 MtrunA17_Chr3g0122121 35.750 400 220 12 392 763 88 478 3.80e-55 209
Msa0804000 MtrunA17_Chr2g0307481 35.411 401 233 9 348 735 18 405 8.91e-55 202
Msa0804000 MtrunA17_Chr3g0134191 37.027 370 180 11 401 727 9 368 1.86e-54 206
Msa0804000 MtrunA17_Chr5g0427481 36.571 350 186 9 401 723 18 358 2.85e-54 206
Msa0804000 MtrunA17_Chr4g0053211 34.826 402 204 13 400 753 12 403 7.55e-53 201
Msa0804000 MtrunA17_Chr1g0153061 35.792 366 190 8 401 727 9 368 7.97e-52 198
Msa0804000 MtrunA17_Chr7g0269681 48.293 205 106 0 550 754 21 225 2.70e-51 188
Msa0804000 MtrunA17_Chr7g0258991 32.779 421 260 12 395 809 68 471 5.39e-50 192
Msa0804000 MtrunA17_Chr1g0193221 37.015 335 186 8 401 722 4 326 5.45e-50 193
Msa0804000 MtrunA17_Chr8g0377731 36.011 361 185 10 445 778 91 432 6.26e-50 192
Msa0804000 MtrunA17_Chr5g0398521 31.579 551 299 18 399 908 56 569 3.10e-49 189
Msa0804000 MtrunA17_Chr1g0152231 37.874 301 171 5 435 722 36 333 5.00e-49 187
Msa0804000 MtrunA17_Chr7g0245931 33.659 410 219 12 399 772 51 443 1.68e-47 184
Msa0804000 MtrunA17_Chr4g0035661 35.294 340 203 9 398 731 87 415 9.94e-47 182
Msa0804000 MtrunA17_Chr3g0145071 34.783 345 208 9 393 731 92 425 3.87e-46 180
Msa0804000 MtrunA17_Chr8g0386891 48.205 195 95 2 570 761 4 195 5.19e-45 168
Msa0804000 MtrunA17_Chr7g0238581 31.675 382 234 11 401 764 26 398 3.97e-44 170
Msa0804000 MtrunA17_Chr8g0390991 56.287 167 73 0 570 736 4 170 6.49e-44 168
Msa0804000 MtrunA17_Chr6g0484501 48.768 203 98 2 562 761 26 225 1.97e-43 158
Msa0804000 MtrunA17_Chr6g0484511 35.688 269 138 8 358 614 251 496 2.11e-43 165
Msa0804000 MtrunA17_Chr4g0070001 33.245 376 228 10 401 767 144 505 2.93e-43 171
Msa0804000 MtrunA17_Chr8g0390981 44.776 201 83 5 370 549 475 668 1.37e-42 166
Msa0804000 MtrunA17_Chr6g0483701 28.479 618 360 23 401 954 31 630 1.62e-42 168
Msa0804000 MtrunA17_Chr7g0269691 43.956 182 81 3 380 549 380 552 7.02e-42 162
Msa0804000 MtrunA17_Chr5g0405181 32.143 420 248 14 401 799 21 424 3.26e-41 164
Msa0804000 MtrunA17_Chr4g0036001 32.084 427 262 13 382 797 7 416 9.21e-41 162
Msa0804000 MtrunA17_Chr3g0101021 33.051 354 196 12 400 727 75 413 1.54e-40 162
Msa0804000 MtrunA17_Chr5g0445211 30.713 407 230 15 400 767 74 467 1.06e-39 160
Msa0804000 MtrunA17_Chr8g0386901 45.506 178 86 5 380 549 463 637 1.51e-39 157
Msa0804000 MtrunA17_Chr8g0372171 33.134 335 200 9 401 722 20 343 6.85e-38 154
Msa0804000 MtrunA17_Chr2g0331761 32.448 339 202 10 401 725 186 511 7.57e-37 149
Msa0804000 MtrunA17_Chr3g0142261 33.234 334 200 9 401 722 20 342 8.44e-37 151
Msa0804000 MtrunA17_Chr6g0485471 31.751 337 207 8 401 725 116 441 2.97e-36 147
Msa0804000 MtrunA17_Chr4g0067421 33.237 346 195 10 401 722 206 539 1.26e-34 142
Msa0804000 MtrunA17_Chr2g0295881 32.174 345 202 10 401 722 198 533 3.50e-33 138
Msa0804000 MtrunA17_Chr1g0187411 27.470 506 284 19 422 881 137 605 1.28e-31 133
Msa0804000 MtrunA17_Chr6g0470541 28.344 314 204 11 397 702 2 302 2.77e-22 103
Msa0804000 MtrunA17_Chr3g0142841 23.975 488 304 16 447 915 145 584 5.74e-21 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804000 AT2G22610.3 59.357 1058 390 12 23 1055 42 1084 0.0 1224
Msa0804000 AT2G22610.2 60.038 1041 388 13 23 1055 42 1062 0.0 1219
Msa0804000 AT2G22610.1 59.168 1058 391 13 23 1055 42 1083 0.0 1216
Msa0804000 AT1G72250.4 49.607 764 343 8 61 801 172 916 0.0 725
Msa0804000 AT1G72250.3 49.607 764 343 8 61 801 173 917 0.0 725
Msa0804000 AT1G72250.2 48.822 764 337 9 61 801 173 905 0.0 701
Msa0804000 AT1G72250.1 48.298 764 333 10 61 801 172 896 0.0 685
Msa0804000 AT5G27550.2 55.394 482 201 5 328 802 60 534 5.68e-176 533
Msa0804000 AT5G27550.1 55.394 482 201 5 328 802 60 534 5.68e-176 533
Msa0804000 AT2G47500.2 47.912 407 195 4 380 779 379 775 3.90e-110 365
Msa0804000 AT1G09170.4 51.351 370 166 5 380 740 414 778 7.50e-110 362
Msa0804000 AT2G47500.1 47.912 407 195 4 380 779 379 775 1.06e-109 365
Msa0804000 AT1G09170.3 51.351 370 166 5 380 740 414 778 1.60e-109 360
Msa0804000 AT1G09170.7 51.351 370 166 5 380 740 414 778 1.60e-109 360
Msa0804000 AT1G09170.2 51.351 370 166 5 380 740 414 778 5.23e-109 361
Msa0804000 AT1G09170.5 51.351 370 166 5 380 740 414 778 3.41e-108 362
Msa0804000 AT5G27000.1 48.593 391 179 4 358 740 363 739 8.24e-108 360
Msa0804000 AT1G73860.2 38.640 559 293 13 240 768 263 801 1.07e-104 350
Msa0804000 AT1G73860.1 38.779 557 295 12 240 768 346 884 2.21e-104 351
Msa0804000 AT1G18410.3 39.382 518 294 8 260 760 341 855 5.27e-104 350
Msa0804000 AT1G18410.2 39.382 518 294 8 260 760 341 855 5.27e-104 350
Msa0804000 AT1G18410.4 45.823 395 202 4 375 760 607 998 2.98e-102 348
Msa0804000 AT1G18410.5 41.513 489 260 10 260 732 331 809 9.46e-102 343
Msa0804000 AT3G44730.1 45.631 412 208 6 358 760 339 743 5.11e-101 343
Msa0804000 AT3G44730.4 45.631 412 208 6 358 760 339 743 5.11e-101 343
Msa0804000 AT3G44730.2 45.631 412 208 6 358 760 384 788 1.12e-100 343
Msa0804000 AT3G44730.3 45.631 412 208 6 358 760 384 788 1.12e-100 343
Msa0804000 AT1G18410.1 39.652 517 286 9 260 760 484 990 2.94e-100 342
Msa0804000 AT3G10310.2 45.974 385 192 6 380 754 343 721 5.14e-98 332
Msa0804000 AT3G10310.1 45.974 385 192 6 380 754 343 721 5.23e-98 332
Msa0804000 AT5G41310.1 43.299 388 184 5 386 761 408 771 7.86e-93 318
Msa0804000 AT1G63640.5 45.205 365 194 3 370 728 432 796 1.56e-91 316
Msa0804000 AT1G63640.1 45.205 365 194 3 370 728 442 806 1.81e-91 316
Msa0804000 AT1G63640.4 45.205 365 194 3 370 728 442 806 1.81e-91 316
Msa0804000 AT1G63640.3 45.205 365 194 3 370 728 442 806 1.97e-91 316
Msa0804000 AT1G09170.6 51.258 318 141 5 380 688 414 726 5.70e-91 308
Msa0804000 AT1G09170.8 51.258 318 141 5 380 688 414 726 5.70e-91 308
Msa0804000 AT4G21270.1 39.463 484 245 9 275 733 323 783 2.71e-90 307
Msa0804000 AT4G27180.1 43.814 388 201 5 365 736 352 738 4.05e-90 305
Msa0804000 AT4G27180.2 43.814 388 201 5 365 736 352 738 4.05e-90 305
Msa0804000 AT5G54670.3 41.727 417 227 6 336 737 273 688 2.30e-89 302
Msa0804000 AT5G54670.1 41.727 417 227 6 336 737 333 748 9.92e-89 302
Msa0804000 AT5G54670.2 41.727 417 227 6 336 737 333 748 9.92e-89 302
Msa0804000 AT1G63640.2 44.505 364 191 3 370 728 442 799 1.35e-88 308
Msa0804000 AT4G05190.2 40.583 446 229 10 317 730 323 764 1.18e-87 299
Msa0804000 AT4G05190.1 40.583 446 229 10 317 730 336 777 1.32e-87 300
Msa0804000 AT1G55550.1 41.766 419 218 7 366 770 57 463 4.76e-87 300
Msa0804000 AT1G09170.1 45.405 370 152 6 380 740 414 742 2.76e-85 298
Msa0804000 AT5G65930.2 41.363 411 220 6 372 775 860 1256 6.50e-85 300
Msa0804000 AT5G65930.1 41.363 411 220 6 372 775 859 1255 6.51e-85 300
Msa0804000 AT5G65930.3 41.363 411 220 6 372 775 866 1262 9.33e-85 300
Msa0804000 AT5G27950.1 40.394 406 207 8 353 740 30 418 8.91e-79 271
Msa0804000 AT5G65460.6 34.432 546 311 13 384 914 122 635 2.13e-69 253
Msa0804000 AT5G65460.4 32.701 633 364 16 312 914 35 635 4.13e-69 253
Msa0804000 AT5G65460.2 34.432 546 311 13 384 914 122 635 4.36e-69 252
Msa0804000 AT5G65460.1 32.701 633 364 16 312 914 35 635 4.64e-69 253
Msa0804000 AT5G10470.1 30.956 659 386 16 312 928 46 677 5.07e-67 247
Msa0804000 AT5G10470.2 30.956 659 386 16 312 928 46 677 5.22e-67 247
Msa0804000 AT5G65460.3 32.344 640 364 17 312 914 35 642 7.23e-67 246
Msa0804000 AT2G28620.3 34.576 483 264 11 400 855 50 507 5.95e-61 227
Msa0804000 AT2G28620.2 34.576 483 264 11 400 855 50 507 5.95e-61 227
Msa0804000 AT2G28620.1 34.576 483 264 11 400 855 50 507 6.69e-61 226
Msa0804000 AT3G19050.1 39.828 349 183 10 400 727 193 535 8.81e-61 228
Msa0804000 AT2G37420.1 33.406 458 269 10 400 834 48 492 1.17e-60 226
Msa0804000 AT2G37420.2 33.406 458 269 10 400 834 48 492 1.17e-60 226
Msa0804000 AT3G45850.2 32.485 511 294 13 400 884 55 540 2.57e-59 222
Msa0804000 AT3G45850.1 32.485 511 294 13 400 884 55 540 2.57e-59 222
Msa0804000 AT2G36200.1 33.594 512 280 16 400 858 12 516 2.14e-58 219
Msa0804000 AT3G44050.1 39.944 358 188 9 400 736 93 444 3.66e-58 219
Msa0804000 AT4G14150.1 37.433 374 197 10 401 749 92 453 5.89e-58 219
Msa0804000 AT5G60930.1 30.488 574 331 14 401 912 7 574 1.33e-57 218
Msa0804000 AT5G60930.3 30.849 577 325 16 401 912 7 574 1.83e-57 217
Msa0804000 AT5G60930.2 30.488 574 331 14 401 912 7 574 2.13e-57 217
Msa0804000 AT3G17360.2 34.685 444 212 13 400 788 168 588 5.06e-57 216
Msa0804000 AT3G17360.3 37.845 362 164 10 400 723 168 506 1.24e-56 215
Msa0804000 AT3G17360.1 37.845 362 164 10 400 723 168 506 1.34e-56 215
Msa0804000 AT3G23670.2 38.506 348 177 10 401 723 97 432 7.89e-55 207
Msa0804000 AT3G23670.1 38.506 348 177 10 401 723 97 432 1.23e-54 208
Msa0804000 AT1G18550.1 38.323 334 190 5 401 722 152 481 2.48e-54 203
Msa0804000 AT3G63480.2 32.297 418 248 8 444 850 47 440 2.69e-54 197
Msa0804000 AT2G36200.2 31.978 541 281 18 400 858 12 547 1.02e-53 204
Msa0804000 AT3G63480.1 32.701 422 245 10 444 850 47 444 1.20e-53 195
Msa0804000 AT3G49650.1 33.256 430 258 9 401 805 15 440 1.90e-53 201
Msa0804000 AT1G01950.2 34.821 448 236 16 399 807 59 489 2.08e-52 199
Msa0804000 AT1G01950.1 34.821 448 236 16 399 807 59 489 2.21e-52 199
Msa0804000 AT1G01950.3 34.821 448 236 16 399 807 59 489 2.51e-52 199
Msa0804000 AT5G47820.2 34.501 371 194 8 400 727 11 375 2.53e-51 197
Msa0804000 AT5G47820.1 34.501 371 194 8 400 727 11 375 2.53e-51 197
Msa0804000 AT1G21730.1 35.200 375 223 9 398 766 73 433 3.69e-51 195
Msa0804000 AT3G54870.3 27.946 594 324 17 444 947 149 728 8.13e-51 195
Msa0804000 AT3G54870.1 28.067 595 323 17 444 947 149 729 9.42e-51 194
Msa0804000 AT3G54870.2 28.067 595 323 17 444 947 149 729 1.32e-50 195
Msa0804000 AT3G50240.2 34.545 385 202 10 401 743 26 402 2.92e-50 193
Msa0804000 AT3G50240.4 34.545 385 202 10 401 743 26 402 9.33e-50 192
Msa0804000 AT3G50240.1 34.545 385 202 10 401 743 26 402 1.22e-49 192
Msa0804000 AT1G59540.1 37.710 297 169 6 436 722 35 325 2.30e-49 189
Msa0804000 AT1G12430.1 36.096 374 188 11 401 738 71 429 3.13e-48 186
Msa0804000 AT1G12430.2 36.096 374 188 11 401 738 71 429 3.29e-48 186
Msa0804000 AT5G27950.2 41.634 257 136 4 493 740 1 252 3.78e-48 179
Msa0804000 AT3G10180.1 35.326 368 210 11 401 752 4 359 3.79e-48 187
Msa0804000 AT3G10180.2 35.326 368 210 11 401 752 4 359 4.33e-48 187
Msa0804000 AT4G39050.1 34.540 359 220 9 378 731 76 424 9.62e-48 186
Msa0804000 AT3G12020.3 32.195 410 254 13 394 796 63 455 1.41e-47 185
Msa0804000 AT3G12020.2 32.195 410 254 13 394 796 63 455 1.41e-47 185
Msa0804000 AT3G12020.4 32.683 410 252 14 394 796 63 455 1.70e-47 184
Msa0804000 AT3G12020.1 32.683 410 252 14 394 796 63 455 1.70e-47 184
Msa0804000 AT5G06670.8 31.746 378 238 9 396 767 62 425 2.57e-47 182
Msa0804000 AT5G06670.4 31.746 378 238 9 396 767 62 425 2.57e-47 182
Msa0804000 AT5G06670.7 31.746 378 238 9 396 767 62 425 2.57e-47 182
Msa0804000 AT5G06670.5 31.746 378 238 9 396 767 62 425 2.75e-47 182
Msa0804000 AT5G06670.2 31.746 378 238 9 396 767 62 425 8.53e-47 182
Msa0804000 AT5G06670.3 31.746 378 238 9 396 767 62 425 8.53e-47 182
Msa0804000 AT2G21380.2 34.412 340 206 9 398 731 102 430 1.60e-45 179
Msa0804000 AT2G21380.1 34.412 340 206 9 398 731 102 430 1.60e-45 179
Msa0804000 AT5G06670.6 31.266 387 237 10 396 767 62 434 2.49e-45 178
Msa0804000 AT5G06670.1 31.266 387 237 10 396 767 62 434 2.49e-45 178
Msa0804000 AT1G01950.4 35.854 357 191 12 480 807 1 348 1.81e-44 173
Msa0804000 AT1G18370.1 32.512 406 247 12 401 790 32 426 1.83e-44 175
Msa0804000 AT5G02370.1 31.454 337 201 8 400 722 20 340 4.36e-41 160
Msa0804000 AT3G50240.3 37.333 300 146 7 484 743 3 300 8.42e-41 163
Msa0804000 AT4G38950.3 31.818 418 241 14 401 797 14 408 3.81e-40 160
Msa0804000 AT4G38950.5 31.818 418 241 14 401 797 14 408 3.81e-40 160
Msa0804000 AT4G38950.4 31.818 418 241 14 401 797 14 408 3.81e-40 160
Msa0804000 AT4G38950.1 31.818 418 241 14 401 797 14 408 3.81e-40 160
Msa0804000 AT4G38950.2 31.818 418 241 14 401 797 14 408 3.81e-40 160
Msa0804000 AT2G21300.2 33.422 377 217 13 401 766 25 378 8.12e-40 160
Msa0804000 AT2G21300.4 33.422 377 217 13 401 766 25 378 8.12e-40 160
Msa0804000 AT2G21300.3 33.422 377 217 13 401 766 25 378 8.12e-40 160
Msa0804000 AT2G21300.1 33.422 377 217 13 401 766 25 378 8.12e-40 160
Msa0804000 AT2G21300.5 33.422 377 217 13 401 766 25 378 8.12e-40 160
Msa0804000 AT4G24170.1 33.435 329 203 7 401 722 7 326 9.21e-40 160
Msa0804000 AT4G24170.2 33.435 329 203 7 401 722 7 326 9.21e-40 160
Msa0804000 AT3G43210.3 36.446 332 188 10 401 722 30 348 1.08e-39 160
Msa0804000 AT3G43210.5 36.446 332 188 10 401 722 30 348 1.08e-39 160
Msa0804000 AT3G43210.2 36.446 332 188 10 401 722 30 348 1.08e-39 160
Msa0804000 AT3G43210.4 36.446 332 188 10 401 722 30 348 1.08e-39 160
Msa0804000 AT3G43210.1 36.446 332 188 10 401 722 30 348 1.08e-39 160
Msa0804000 AT3G16060.1 32.676 355 206 10 393 730 162 500 1.73e-38 154
Msa0804000 AT5G66310.2 32.533 458 255 15 401 842 19 438 3.04e-38 155
Msa0804000 AT5G66310.3 32.533 458 255 15 401 842 19 438 3.04e-38 155
Msa0804000 AT5G66310.1 32.533 458 255 15 401 842 19 438 3.04e-38 155
Msa0804000 AT1G59540.2 38.075 239 133 5 493 722 1 233 9.52e-38 152
Msa0804000 AT3G20150.1 33.648 318 176 10 443 731 134 445 2.48e-36 149
Msa0804000 AT3G20150.2 33.648 318 176 10 443 731 134 445 3.34e-36 149
Msa0804000 AT3G51150.2 32.095 377 220 11 401 764 18 371 5.01e-36 148
Msa0804000 AT3G51150.4 32.095 377 220 11 401 764 18 371 5.01e-36 148
Msa0804000 AT3G51150.3 32.095 377 220 11 401 764 18 371 5.01e-36 148
Msa0804000 AT3G51150.1 32.095 377 220 11 401 764 18 371 5.26e-36 148
Msa0804000 AT5G65460.5 31.750 400 241 9 523 914 14 389 1.23e-34 144
Msa0804000 AT3G16630.2 32.471 348 194 10 401 722 194 526 5.89e-34 141
Msa0804000 AT3G16630.1 32.471 348 194 10 401 722 194 526 5.89e-34 141
Msa0804000 AT4G14330.1 31.111 360 198 9 474 795 120 467 6.59e-29 125
Msa0804000 AT5G42490.1 31.636 275 166 9 401 665 10 272 6.27e-24 109
Msa0804000 AT5G42490.2 31.636 275 166 9 401 665 10 272 6.58e-24 109
Msa0804000 AT5G23910.2 28.571 301 187 12 441 732 55 336 4.01e-21 100
Msa0804000 AT5G23910.1 28.571 301 187 12 441 732 51 332 4.52e-21 99.8
Msa0804000 AT3G51150.5 37.500 184 97 5 587 764 47 218 4.16e-19 94.0
Msa0804000 AT1G20060.9 26.259 278 183 6 447 709 165 435 2.14e-14 78.6
Msa0804000 AT1G20060.3 26.259 278 183 6 447 709 165 435 2.15e-14 78.6
Msa0804000 AT1G20060.5 27.046 281 177 7 447 709 165 435 2.32e-14 78.6
Msa0804000 AT1G20060.10 27.046 281 177 7 447 709 165 435 2.32e-14 78.6
Msa0804000 AT1G20060.4 26.259 278 183 6 447 709 165 435 2.35e-14 78.6
Msa0804000 AT1G20060.2 27.046 281 177 7 447 709 165 435 2.36e-14 78.6
Msa0804000 AT1G20060.6 27.046 281 177 7 447 709 165 435 2.42e-14 78.6
Msa0804000 AT1G20060.8 27.046 281 177 7 447 709 165 435 2.44e-14 78.6
Msa0804000 AT1G20060.7 27.046 281 177 7 447 709 165 435 2.74e-14 78.2

Find 208 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTTGGTTTGGGATT+AGG 0.130212 5_3:-19555191 None:intergenic
CAAGGTTCTGCTTTGTTAAA+AGG 0.137796 5_3:+19562019 Msa0804000:CDS
AGATGGATGCCTTGGAATTT+TGG 0.152963 5_3:+19557508 Msa0804000:CDS
GTTGAGATTATTAATGTAAA+TGG 0.154741 5_3:+19555918 Msa0804000:CDS
TTCTTGTTGGTTTGGGATTA+GGG 0.178973 5_3:-19555190 None:intergenic
TAAACCATCTTATTTAATTC+AGG 0.204428 5_3:-19557045 None:intergenic
CAAACTTTGGCTTGTGGATT+TGG 0.226904 5_3:+19559915 Msa0804000:CDS
ATAAGATTTGAGAGTTTAAA+TGG 0.237236 5_3:+19556174 Msa0804000:CDS
CTGAATCTTCTTGTTGGTTT+GGG 0.243087 5_3:-19555197 None:intergenic
ACTGAATCTTCTTGTTGGTT+TGG 0.265705 5_3:-19555198 None:intergenic
GTATCAATTTGCTTCTTAAC+AGG 0.277522 5_3:-19560439 None:intergenic
CCATTACTGAATCTTCTTGT+TGG 0.280962 5_3:-19555203 None:intergenic
AACGTTTGCATCTTTGCTTA+TGG 0.282569 5_3:+19559221 Msa0804000:CDS
TGCATACCTTGATCATCTTT+TGG 0.289514 5_3:-19557578 None:intergenic
AGTTCAAAACTCATTCAAAA+TGG 0.289625 5_3:+19555270 Msa0804000:CDS
TTCACCAGATCTCAAAATTC+AGG 0.292712 5_3:+19555294 Msa0804000:CDS
CTCTCAAACGAATTTCAAAA+TGG 0.294776 5_3:+19555128 Msa0804000:exon
GTAACAACAGTTGCTGATAT+TGG 0.294895 5_3:+19562332 Msa0804000:three_prime_UTR
AACTGAAATGAGTAGGAAAA+TGG 0.302903 5_3:+19556627 Msa0804000:CDS
AGAAGCAATTATCAGTTTAC+AGG 0.305197 5_3:+19556858 Msa0804000:CDS
CCGTTGTCGTCCATTGAATA+AGG 0.307448 5_3:+19557436 Msa0804000:CDS
AAAGTAGTCACATTCCTTAT+AGG 0.311564 5_3:+19560052 Msa0804000:CDS
AACCGATCTCTTTCTGCTCT+TGG 0.317036 5_3:+19560003 Msa0804000:CDS
GAGAAACTTGTTTCTCTGAT+TGG 0.336888 5_3:-19560758 None:intergenic
AGAATAGAGGTGTAAATTAC+AGG 0.339481 5_3:+19559288 Msa0804000:CDS
CTAGCTCTCTTATGAGATAA+AGG 0.344366 5_3:-19562226 None:intergenic
AGGTGTGGCCGCCACCTTTA+CGG 0.352301 5_3:-19561903 None:intergenic
CAGGTTCTCAGCTTGTTTCT+CGG 0.363391 5_3:-19556791 None:intergenic
TTGTTAGTGGGATCTGCATT+AGG 0.365227 5_3:+19556205 Msa0804000:CDS
ATGAACTTGATAAGAAGAAA+TGG 0.365625 5_3:+19556833 Msa0804000:CDS
ATTCAGCATGCTATGTATAA+TGG 0.369898 5_3:+19559852 Msa0804000:intron
CTGGCAGGTTCTATCTGAAT+TGG 0.375454 5_3:+19556068 Msa0804000:intron
AAGCAGAACCTTGACTTATC+TGG 0.377957 5_3:-19562009 None:intergenic
AATTAATAGGTATACCTATA+AGG 0.378135 5_3:-19560066 None:intergenic
GACATTTCAACCTTATTCAA+TGG 0.382688 5_3:-19557446 None:intergenic
ATCTTTGCTTATGGACAAAC+AGG 0.385232 5_3:+19559230 Msa0804000:CDS
GCATTTGTTTAGAGTTAGTA+AGG 0.386562 5_3:+19559319 Msa0804000:CDS
ATGCAGATCCCACTAACAAC+TGG 0.391897 5_3:-19556201 None:intergenic
ATGCGACTCTCAATATCATT+TGG 0.398877 5_3:-19561959 None:intergenic
CCGCACGAATGAGGCGATAG+TGG 0.400753 5_3:+19555791 Msa0804000:CDS
CTACGGGACCAACATCAAAA+AGG 0.402821 5_3:+19559420 Msa0804000:CDS
GCTTATGGACAAACAGGAAC+AGG 0.410003 5_3:+19559236 Msa0804000:CDS
AATCCCTGAATTAAATAAGA+TGG 0.412442 5_3:+19557041 Msa0804000:CDS
GGTTTGGGATTAGGGTTTGA+GGG 0.413865 5_3:-19555182 None:intergenic
AAGGTTCTGCTTTGTTAAAA+GGG 0.417581 5_3:+19562020 Msa0804000:CDS
CCGCCTAAAATTGTAAGAAC+TGG 0.418408 5_3:+19562163 Msa0804000:CDS
CGGGCCACTGTGAAGGATGA+TGG 0.419376 5_3:+19556141 Msa0804000:CDS
TTGAACACCCTCATTCCTTT+CGG 0.419530 5_3:-19555942 None:intergenic
AAAGTATGAAAATAAGATAA+AGG 0.423243 5_3:+19556546 Msa0804000:CDS
GTGGATATTATCCTTTCCCT+TGG 0.424834 5_3:-19560670 None:intergenic
AGAGTGAGGGGCGTTGAGTT+AGG 0.425970 5_3:+19560415 Msa0804000:CDS
TCACTTGATCAAGCTCCATC+TGG 0.426399 5_3:-19556657 None:intergenic
TTGAGATTATTAATGTAAAT+GGG 0.429309 5_3:+19555919 Msa0804000:CDS
CTTGCAAAACATTGAGAGTA+AGG 0.432710 5_3:+19560647 Msa0804000:CDS
TGGTTTGGGATTAGGGTTTG+AGG 0.438040 5_3:-19555183 None:intergenic
AAACCATCTTATTTAATTCA+GGG 0.438958 5_3:-19557044 None:intergenic
GGAAGCAATGCTAGAGCAGT+TGG 0.441485 5_3:+19559679 Msa0804000:CDS
TGAAATTCGTTGGATTGAAT+CGG 0.445524 5_3:-19555153 None:intergenic
TCAATTATGTGAAAAGTTGA+AGG 0.451391 5_3:+19560779 Msa0804000:CDS
CTTTGGCTTGTGGATTTGGC+AGG 0.451627 5_3:+19559919 Msa0804000:CDS
AGGGTCATTGTGAAATTCGT+TGG 0.451639 5_3:-19555163 None:intergenic
GGAGGGGAGGCGACTAATGA+AGG 0.451939 5_3:+19555714 Msa0804000:CDS
ATCAATGGTAATCTCTGTGC+TGG 0.454206 5_3:+19559190 Msa0804000:CDS
AGCTAGCACAAGCAGAGATC+AGG 0.455058 5_3:+19562243 Msa0804000:CDS
ATCTTCCTTTCTAAAAGATA+AGG 0.457713 5_3:+19561407 Msa0804000:CDS
GGTTTATGCAGTACAGGAGT+TGG 0.461163 5_3:+19557062 Msa0804000:CDS
ATGTTGGTCCCGTAGCCAAT+AGG 0.464243 5_3:-19559412 None:intergenic
GTGGCGGCCACACCTGATAT+AGG 0.464738 5_3:+19561911 Msa0804000:CDS
CTGCTGTACTCTTCAACATA+AGG 0.465376 5_3:+19560815 Msa0804000:CDS
TGAACAAATCAGAGACCTAT+TGG 0.466284 5_3:+19559397 Msa0804000:CDS
CACTACAGCTGATTGATTGT+CGG 0.468814 5_3:+19556121 Msa0804000:CDS
GACAGCAAATTTCCAACAGA+AGG 0.470847 5_3:+19561141 Msa0804000:CDS
GTTAAGAAGCAAATTGATAC+AGG 0.478187 5_3:+19560442 Msa0804000:CDS
AGTGATTATGTCATATTGAA+TGG 0.478934 5_3:+19562463 Msa0804000:three_prime_UTR
GAAAAGATTAAAGAACTTGA+AGG 0.479522 5_3:+19560705 Msa0804000:CDS
GGAATCCTTGCTAAAACAAC+AGG 0.479953 5_3:+19561576 Msa0804000:CDS
ACTACAGCTGATTGATTGTC+GGG 0.480686 5_3:+19556122 Msa0804000:CDS
CACAAGCCAAAGTTTGCTCT+TGG 0.483420 5_3:-19559908 None:intergenic
TGTTTAGAGTTAGTAAGGAA+AGG 0.483579 5_3:+19559324 Msa0804000:CDS
AGCTGGGTGTACAACGGTTG+TGG 0.484316 5_3:+19557469 Msa0804000:CDS
GGGCCACTGTGAAGGATGAT+GGG 0.489671 5_3:+19556142 Msa0804000:CDS
TGAACTTGATAAGAAGAAAT+GGG 0.489705 5_3:+19556834 Msa0804000:CDS
AGAATTGACAACCTTCCTCC+TGG 0.490896 5_3:+19555870 Msa0804000:CDS
GTTTATGCAGTACAGGAGTT+GGG 0.491474 5_3:+19557063 Msa0804000:CDS
TAAGATGGTTTATGCAGTAC+AGG 0.497109 5_3:+19557056 Msa0804000:CDS
AATGGAAGCCCAGTTGTTAG+TGG 0.500095 5_3:+19556192 Msa0804000:CDS
CTGTTATGTTGAAGCCGTAA+AGG 0.501805 5_3:+19561889 Msa0804000:CDS
TCAGAGTCTCACCGACATCC+TGG 0.502411 5_3:-19560372 None:intergenic
AATGAAGTTCAAGAGGCTAA+AGG 0.507487 5_3:+19557272 Msa0804000:CDS
TTACATTCAATGAAATCGCT+TGG 0.510215 5_3:-19556356 None:intergenic
CGTGCAAGGAGAGCGACTTA+AGG 0.510478 5_3:+19559966 Msa0804000:CDS
CAAAATATTGTCCAGGAGGA+AGG 0.511045 5_3:-19555881 None:intergenic
GTCACTTATGTTGTCAACCT+TGG 0.512217 5_3:-19559635 None:intergenic
ATGAAATCGCTTGGCACTGG+TGG 0.513500 5_3:-19556347 None:intergenic
GCAGCAAAAGATGGATGCCT+TGG 0.514816 5_3:+19557500 Msa0804000:CDS
GATTGAAATTCCTTCATCAC+AGG 0.517243 5_3:+19556394 Msa0804000:CDS
TGTTTACATACAAGAAGAAA+AGG 0.517798 5_3:+19555965 Msa0804000:CDS
AGGAGAGCGACAAAAGAGTC+AGG 0.520784 5_3:+19556225 Msa0804000:CDS
TGAGAGAAAACTGAAAGAGC+AGG 0.520980 5_3:+19561543 Msa0804000:CDS
TGATGAAGAGTGAGCAGTCT+CGG 0.521247 5_3:+19556986 Msa0804000:CDS
GACACATTCATGTGCTTCAA+AGG 0.521252 5_3:-19557013 None:intergenic
TCACCGACATCCTGGTCTGA+TGG 0.521468 5_3:-19560364 None:intergenic
AATAAGGTTGAAATGTCAGC+TGG 0.522417 5_3:+19557452 Msa0804000:CDS
ATCTATTAGAAATACTCCTC+AGG 0.524245 5_3:-19556810 None:intergenic
CTTATGTTGAAGAGTACAGC+AGG 0.525002 5_3:-19560814 None:intergenic
AATGTTTGTAAATGCGGGAG+GGG 0.526382 5_3:+19555698 Msa0804000:CDS
ACATTGAGAACAATTTAGTC+GGG 0.528952 5_3:+19562092 Msa0804000:CDS
GACATTGAGAACAATTTAGT+CGG 0.530117 5_3:+19562091 Msa0804000:CDS
GAGATAAAACAAAATTATGA+AGG 0.533866 5_3:+19559583 Msa0804000:CDS
AACATAGTAGTCGATCTCAT+TGG 0.535582 5_3:+19559719 Msa0804000:CDS
ATGTGTTACAAACCTTCTGT+TGG 0.538656 5_3:-19561153 None:intergenic
TCAATGAAATCGCTTGGCAC+TGG 0.541901 5_3:-19556350 None:intergenic
ACATTTAAGTCACTCACTAC+AGG 0.542756 5_3:+19556679 Msa0804000:CDS
CGTCATTAACTGAAATGAGT+AGG 0.544840 5_3:+19556620 Msa0804000:CDS
GAAGGAACAGAGCAGAATAG+AGG 0.546085 5_3:+19559275 Msa0804000:CDS
CTCAGCAGATGAGAAACAAA+AGG 0.546632 5_3:+19562053 Msa0804000:CDS
GCGACTAATGAAGGAGCTGA+TGG 0.551390 5_3:+19555723 Msa0804000:CDS
TTGGATATCTATGCAGCTGT+TGG 0.552000 5_3:+19556087 Msa0804000:CDS
ACACCTCTAACCTGTGATGA+AGG 0.552995 5_3:-19556404 None:intergenic
TTTGAGGTAGAGTATAATTG+TGG 0.553464 5_3:-19562486 None:intergenic
GATTTATCAGTCAGCTCGGG+TGG 0.554237 5_3:+19555833 Msa0804000:CDS
TAGACATACCTAGTGAGTCT+TGG 0.554882 5_3:-19560192 None:intergenic
TAATAATCTCAACAAAATGC+AGG 0.556051 5_3:-19555908 None:intergenic
GCTCTTCAATGAAGTTCAAG+AGG 0.556177 5_3:+19557265 Msa0804000:CDS
CAAGAGCAAACTTTGGCTTG+TGG 0.556310 5_3:+19559909 Msa0804000:CDS
CATTTACTCCAAGACTCACT+AGG 0.556345 5_3:+19560184 Msa0804000:CDS
CGTCGATTTATCAGTCAGCT+CGG 0.556612 5_3:+19555829 Msa0804000:CDS
CTCCAAGAGCAGAAAGAGAT+CGG 0.556711 5_3:-19560005 None:intergenic
CGACAATCAATCAGCTGTAG+TGG 0.559465 5_3:-19556120 None:intergenic
TGTGTAATGTTTGTAAATGC+GGG 0.560456 5_3:+19555693 Msa0804000:CDS
AATCAGAGACCTATTGGCTA+CGG 0.561642 5_3:+19559403 Msa0804000:CDS
TATACACCAAAAGATGATCA+AGG 0.562132 5_3:+19557572 Msa0804000:CDS
AGCTGAAAGATCAGTTGCAA+GGG 0.562482 5_3:+19561373 Msa0804000:CDS
GTGTGGACTGTACTGCAAGC+TGG 0.563345 5_3:+19559658 Msa0804000:CDS
CTAAAATTGTAAGAACTGGT+AGG 0.564054 5_3:+19562167 Msa0804000:CDS
TCATCCATCACAAGAAAAGG+TGG 0.567849 5_3:-19562388 None:intergenic
TGAGAGTAAGGCCAAGGGAA+AGG 0.567887 5_3:+19560659 Msa0804000:CDS
AGTGTACCAAGAGCAAACTT+TGG 0.568781 5_3:+19559902 Msa0804000:CDS
ATGGAAGCCCAGTTGTTAGT+GGG 0.572521 5_3:+19556193 Msa0804000:CDS
GTTTGTAAATGCGGGAGGGG+AGG 0.572631 5_3:+19555701 Msa0804000:CDS
ATCAGAGACCTATTGGCTAC+GGG 0.572963 5_3:+19559404 Msa0804000:CDS
TAACTTTGCAACTAGAGTGA+GGG 0.574352 5_3:+19560402 Msa0804000:CDS
AAACATTGAGAGTAAGGCCA+AGG 0.574522 5_3:+19560653 Msa0804000:CDS
GCTTTCTTCTAATTTCCTCA+AGG 0.574993 5_3:-19560625 None:intergenic
TTGGAGATTCATCACTTGTG+CGG 0.575327 5_3:-19561940 None:intergenic
ACAAGCAGAGATCAGGCTCA+AGG 0.578572 5_3:+19562250 Msa0804000:CDS
GTCGATTTATCAGTCAGCTC+GGG 0.579050 5_3:+19555830 Msa0804000:CDS
TAAATGGGCCGAAAGGAATG+AGG 0.580606 5_3:+19555934 Msa0804000:CDS
CCAACAAGAAGATTCAGTAA+TGG 0.583365 5_3:+19555203 Msa0804000:CDS
GAAAGAGCAGGAGCAGAACT+CGG 0.583759 5_3:+19561555 Msa0804000:CDS
ACAAAGAGCGAGAGCAACAG+TGG 0.585453 5_3:+19561855 Msa0804000:CDS
AGGTCAACAAAATATTGTCC+AGG 0.586648 5_3:-19555888 None:intergenic
ACGAATGAGGCGATAGTGGA+AGG 0.588795 5_3:+19555795 Msa0804000:CDS
ACAAATAAGTCCATCAGACC+AGG 0.589044 5_3:+19560354 Msa0804000:CDS
CAATTATGTGAAAAGTTGAA+GGG 0.589053 5_3:+19560780 Msa0804000:CDS
ACCTTGGCTTCTACAACACC+AGG 0.590292 5_3:-19559619 None:intergenic
AAGCTGAAAGATCAGTTGCA+AGG 0.592363 5_3:+19561372 Msa0804000:CDS
TGTTGAAGCCGTAAAGGTGG+CGG 0.594372 5_3:+19561895 Msa0804000:CDS
GTGTGTAATGTTTGTAAATG+CGG 0.597843 5_3:+19555692 Msa0804000:CDS
TTAACTTTGCAACTAGAGTG+AGG 0.598608 5_3:+19560401 Msa0804000:CDS
TGATTGTCGGGCCACTGTGA+AGG 0.604540 5_3:+19556134 Msa0804000:CDS
GGAACTTGACTAGTAATGAC+CGG 0.608114 5_3:-19562205 None:intergenic
ATTAATCAAAAGCATATCAA+CGG 0.608149 5_3:+19555034 Msa0804000:five_prime_UTR
AGCCAGTTGCCAAAATTCCA+AGG 0.610337 5_3:-19557517 None:intergenic
CAAAAGAATGCTATGAGGCG+TGG 0.610480 5_3:+19556596 Msa0804000:CDS
AGGCTCAAGGAGTTAAAGAG+AGG 0.613323 5_3:+19562263 Msa0804000:CDS
GAAGGACATCATCATGTACC+TGG 0.614193 5_3:+19559601 Msa0804000:CDS
ATTAATGTAAATGGGCCGAA+AGG 0.614341 5_3:+19555927 Msa0804000:CDS
CATATCTGTTAGTGTGCTCG+AGG 0.615354 5_3:+19559367 Msa0804000:CDS
TGCAGATCCCACTAACAACT+GGG 0.615645 5_3:-19556200 None:intergenic
GGCTCAAGGAGTTAAAGAGA+GGG 0.615879 5_3:+19562264 Msa0804000:CDS
AACTTTGCAACTAGAGTGAG+GGG 0.624205 5_3:+19560403 Msa0804000:CDS
CTTGCAAAGACTGACGTGCA+AGG 0.625121 5_3:+19559952 Msa0804000:CDS
AAAATCATTCAGATTTGACA+GGG 0.628273 5_3:+19557547 Msa0804000:CDS
CTATCACGTAAAGTGGATGA+CGG 0.629410 5_3:-19562118 None:intergenic
GCAAGGAGAGCGACTTAAGG+AGG 0.629473 5_3:+19559969 Msa0804000:CDS
ATGGTAATCTCTGTGCTGGA+TGG 0.630703 5_3:+19559194 Msa0804000:CDS
AGAAACAAGCTGAGAACCTG+AGG 0.634481 5_3:+19556794 Msa0804000:CDS
CAAAGCAAAAGAATGCTATG+AGG 0.636735 5_3:+19556591 Msa0804000:CDS
ACTTCAAAAGACAAAAGCAA+TGG 0.638216 5_3:+19560468 Msa0804000:CDS
GGCCACTGTGAAGGATGATG+GGG 0.640167 5_3:+19556143 Msa0804000:CDS
ACCTGGTGTTGTAGAAGCCA+AGG 0.641911 5_3:+19559618 Msa0804000:CDS
GTAAACCGCCAGATAAGTCA+AGG 0.643578 5_3:+19562001 Msa0804000:CDS
ATGGCAGATGAAGGAACTAG+AGG 0.643764 5_3:+19561826 Msa0804000:intron
GAGCTGACTGATAAATCGAC+GGG 0.644570 5_3:-19555827 None:intergenic
CCACTATCGCCTCATTCGTG+CGG 0.646554 5_3:-19555791 None:intergenic
AGTCCATCAGACCAGGATGT+CGG 0.647343 5_3:+19560361 Msa0804000:CDS
CAGAACCTTGACTTATCTGG+CGG 0.648706 5_3:-19562006 None:intergenic
CGAGCTGACTGATAAATCGA+CGG 0.648723 5_3:-19555828 None:intergenic
TTATGTTGAAGCCGTAAAGG+TGG 0.649045 5_3:+19561892 Msa0804000:CDS
ATTTATCAGTCAGCTCGGGT+GGG 0.649156 5_3:+19555834 Msa0804000:CDS
TAGGCTAACAACAAAACCGC+CGG 0.653426 5_3:+19562186 Msa0804000:CDS
AATGAGGCGATAGTGGAAGG+TGG 0.655012 5_3:+19555798 Msa0804000:CDS
AACATTGAGAGTAAGGCCAA+GGG 0.658460 5_3:+19560654 Msa0804000:CDS
TAATGTTTGTAAATGCGGGA+GGG 0.661653 5_3:+19555697 Msa0804000:CDS
TCAACAAAATATTGTCCAGG+AGG 0.664528 5_3:-19555885 None:intergenic
AACAAGCATAGAATCGAACA+AGG 0.667491 5_3:-19555241 None:intergenic
GTAATGTTTGTAAATGCGGG+AGG 0.668947 5_3:+19555696 Msa0804000:CDS
AAATGGGCCGAAAGGAATGA+GGG 0.671060 5_3:+19555935 Msa0804000:CDS
CCTTATTCAATGGACGACAA+CGG 0.673690 5_3:-19557436 None:intergenic
TTGACAACATAAGTGACGTG+TGG 0.675867 5_3:+19559641 Msa0804000:CDS
AGATGACGAGAAAGTGTGAG+CGG 0.681526 5_3:-19555085 None:intergenic
GAAGTAAAGAAGAATCCTTG+AGG 0.717866 5_3:+19560610 Msa0804000:CDS
ACTTGACTAGTAATGACCGG+CGG 0.732625 5_3:-19562202 None:intergenic
ATAAGGTTGAAATGTCAGCT+GGG 0.739136 5_3:+19557453 Msa0804000:CDS
TCACGTAAAGTGGATGACGG+TGG 0.739685 5_3:-19562115 None:intergenic
AATGTCAGCTGGGTGTACAA+CGG 0.751221 5_3:+19557463 Msa0804000:CDS
CACCCCATCATCCTTCACAG+TGG 0.762666 5_3:-19556145 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTATTTTTAATAA+TGG + chr5_3:19558971-19558990 Msa0804000:intron 0.0%
!! TATCATTTATTATAATTCTT+AGG + chr5_3:19556924-19556943 Msa0804000:intron 10.0%
!! AATAAAAAAAAACTCAATAT+CGG - chr5_3:19558955-19558974 None:intergenic 10.0%
!!! TTATTTTTAATAATGGAAAA+AGG + chr5_3:19558978-19558997 Msa0804000:intron 10.0%
!! AATTATTTGACAAAAAATGT+TGG + chr5_3:19555485-19555504 Msa0804000:intron 15.0%
!!! TTTTGATAAATTGTAAATCT+GGG + chr5_3:19555542-19555561 Msa0804000:intron 15.0%
!! TTGAGATTATTAATGTAAAT+GGG + chr5_3:19555919-19555938 Msa0804000:CDS 15.0%
!! AAAGTATGAAAATAAGATAA+AGG + chr5_3:19556546-19556565 Msa0804000:CDS 15.0%
!! AAAAAATATGTACAATTCTT+CGG - chr5_3:19557134-19557153 None:intergenic 15.0%
!!! GTACATATTTTTTTTAGTTT+TGG + chr5_3:19557141-19557160 Msa0804000:intron 15.0%
!!! TGGAATGTTTTAATTTTATA+GGG - chr5_3:19557704-19557723 None:intergenic 15.0%
!!! TTGGAATGTTTTAATTTTAT+AGG - chr5_3:19557705-19557724 None:intergenic 15.0%
!!! AATACCTATTTTTTAAAACA+GGG - chr5_3:19557735-19557754 None:intergenic 15.0%
!!! AAATACCTATTTTTTAAAAC+AGG - chr5_3:19557736-19557755 None:intergenic 15.0%
!! TACTATGTAAATTACAATAA+AGG + chr5_3:19558183-19558202 Msa0804000:intron 15.0%
!! TAAATTACAATAAAGGATAA+AGG + chr5_3:19558190-19558209 Msa0804000:intron 15.0%
!! AAATTACAATAAAGGATAAA+GGG + chr5_3:19558191-19558210 Msa0804000:intron 15.0%
!! TACTATGTAAATTACAATAA+AGG + chr5_3:19558183-19558202 Msa0804000:intron 15.0%
!! TAAATTACAATAAAGGATAA+AGG + chr5_3:19558190-19558209 Msa0804000:intron 15.0%
!! AAATTACAATAAAGGATAAA+GGG + chr5_3:19558191-19558210 Msa0804000:intron 15.0%
!! TACTATGTAAATTACAATAA+AGG + chr5_3:19558183-19558202 Msa0804000:intron 15.0%
!! TAAATTACAATAAAGGATAA+AGG + chr5_3:19558190-19558209 Msa0804000:intron 15.0%
!! AAATTACAATAAAGGATAAA+GGG + chr5_3:19558191-19558210 Msa0804000:intron 15.0%
!! TACTATGTAAATTACAATAA+AGG + chr5_3:19558183-19558202 Msa0804000:intron 15.0%
!! TAAATTACAATAAAGGATAA+AGG + chr5_3:19558190-19558209 Msa0804000:intron 15.0%
!! AAATTACAATAAAGGATAAA+GGG + chr5_3:19558191-19558210 Msa0804000:intron 15.0%
!! ATTATGATTATTTACACAAT+TGG + chr5_3:19559109-19559128 Msa0804000:intron 15.0%
!!! AAATTTAATACGTTTTAGTA+AGG - chr5_3:19560506-19560525 None:intergenic 15.0%
!!! TATAATTTTTTTAGCAACAT+TGG + chr5_3:19560880-19560899 Msa0804000:intron 15.0%
!! ATATTAATTAATAATTCACG+TGG + chr5_3:19561792-19561811 Msa0804000:intron 15.0%
!! TACCTCAAAAATTATAATAT+GGG + chr5_3:19562500-19562519 Msa0804000:three_prime_UTR 15.0%
!! TTTATGTATTTACATAATTC+AGG + chr5_3:19562630-19562649 Msa0804000:intron 15.0%
!!! ACATTAATCATTTTTTGAAA+AGG + chr5_3:19562662-19562681 Msa0804000:intron 15.0%
!!! ATTAATCAAAAGCATATCAA+CGG + chr5_3:19555034-19555053 Msa0804000:five_prime_UTR 20.0%
!!! AGTTTTTTTTAACTGTGATT+GGG - chr5_3:19555422-19555441 None:intergenic 20.0%
!!! AAGTTTTTTTTAACTGTGAT+TGG - chr5_3:19555423-19555442 None:intergenic 20.0%
!!! AAAATGTTGGTAAGTAAATT+AGG + chr5_3:19555498-19555517 Msa0804000:intron 20.0%
!!! AAATGTTGGTAAGTAAATTA+GGG + chr5_3:19555499-19555518 Msa0804000:intron 20.0%
!!! GGGTTTTAAAATTATTGTTT+AGG + chr5_3:19555519-19555538 Msa0804000:intron 20.0%
!!! GTTTTGATAAATTGTAAATC+TGG + chr5_3:19555541-19555560 Msa0804000:intron 20.0%
!! GTTGAGATTATTAATGTAAA+TGG + chr5_3:19555918-19555937 Msa0804000:CDS 20.0%
!! TTTAATTGTAATATTATGGC+TGG + chr5_3:19556049-19556068 Msa0804000:intron 20.0%
!! ATAAGATTTGAGAGTTTAAA+TGG + chr5_3:19556174-19556193 Msa0804000:CDS 20.0%
!!! TTGTTTTTCCTGATTTTAAT+TGG + chr5_3:19556484-19556503 Msa0804000:intron 20.0%
!!! TTTATATGTTTCTTGTTTGA+AGG - chr5_3:19556715-19556734 None:intergenic 20.0%
!!! AAACCATCTTATTTAATTCA+GGG - chr5_3:19557047-19557066 None:intergenic 20.0%
!!! TAAACCATCTTATTTAATTC+AGG - chr5_3:19557048-19557067 None:intergenic 20.0%
!! TCGGTCTTAATTAATAAAAA+TGG - chr5_3:19557115-19557134 None:intergenic 20.0%
!! CAAGAATTATTATAAGTCAA+AGG + chr5_3:19557357-19557376 Msa0804000:intron 20.0%
!!! AAATCTGAATGATTTTTTAG+AGG - chr5_3:19557543-19557562 None:intergenic 20.0%
!! TGATAACAAGATGAAAATAA+TGG - chr5_3:19557934-19557953 None:intergenic 20.0%
!!! ACTTTGTTTTAAAGAAGATA+CGG + chr5_3:19558274-19558293 Msa0804000:intron 20.0%
!!! ACTTTGTTTTAAAGAAGATA+CGG + chr5_3:19558274-19558293 Msa0804000:intron 20.0%
!!! TTTAATAATGGAAAAAGGAT+AGG + chr5_3:19558983-19559002 Msa0804000:intron 20.0%
!! AATGTGATTAGATTTGTAAA+TGG + chr5_3:19559022-19559041 Msa0804000:intron 20.0%
!! CTAGTTTAACTATGAAAATA+TGG + chr5_3:19559521-19559540 Msa0804000:intron 20.0%
!! GAGATAAAACAAAATTATGA+AGG + chr5_3:19559583-19559602 Msa0804000:CDS 20.0%
!! ACTAGAAATTGTAAAGAAAT+GGG - chr5_3:19559765-19559784 None:intergenic 20.0%
!! AAGAAACAAGTAGTAATTAT+CGG - chr5_3:19559832-19559851 None:intergenic 20.0%
!! AAGACTAAAAATTTGATGAA+TGG + chr5_3:19559877-19559896 Msa0804000:CDS 20.0%
!! AATTAATAGGTATACCTATA+AGG - chr5_3:19560069-19560088 None:intergenic 20.0%
!! TAACATTTACATATCAAGAT+TGG - chr5_3:19560114-19560133 None:intergenic 20.0%
!!! TTCATCAATGCTATTTTTTT+TGG + chr5_3:19560136-19560155 Msa0804000:intron 20.0%
!!! CTATTTTTTTTGGATATTTC+AGG + chr5_3:19560146-19560165 Msa0804000:intron 20.0%
!! TTCATCATAAATTGTTCATA+AGG - chr5_3:19560540-19560559 None:intergenic 20.0%
!! TAGTTATAAATAAGTAGCAT+TGG + chr5_3:19561005-19561024 Msa0804000:intron 20.0%
!!! AATTTTTACCATTTTCTATC+TGG + chr5_3:19561744-19561763 Msa0804000:intron 20.0%
!! CTACCTCAAAAATTATAATA+TGG + chr5_3:19562499-19562518 Msa0804000:three_prime_UTR 20.0%
!! AATTTCATTGTTATCAAAAG+AGG + chr5_3:19562690-19562709 Msa0804000:intron 20.0%
! GAGTAAAAAGCAAAGTTAAA+CGG + chr5_3:19555008-19555027 Msa0804000:five_prime_UTR 25.0%
!!! GTTGATATGCTTTTGATTAA+TGG - chr5_3:19555035-19555054 None:intergenic 25.0%
! AGTTCAAAACTCATTCAAAA+TGG + chr5_3:19555270-19555289 Msa0804000:CDS 25.0%
!!! AAAAAACTTGCTTTTCAATC+TGG + chr5_3:19555434-19555453 Msa0804000:intron 25.0%
!!! AAAAACTTGCTTTTCAATCT+GGG + chr5_3:19555435-19555454 Msa0804000:intron 25.0%
! AATATTCCAAGAATTACGAA+AGG + chr5_3:19555594-19555613 Msa0804000:intron 25.0%
!!! ATGTATATATTTTGAAGCAG+AGG + chr5_3:19555668-19555687 Msa0804000:intron 25.0%
! TAATAATCTCAACAAAATGC+AGG - chr5_3:19555911-19555930 None:intergenic 25.0%
! TGTTTACATACAAGAAGAAA+AGG + chr5_3:19555965-19555984 Msa0804000:CDS 25.0%
!! TGAAGTGTCAAATATATCAT+AGG + chr5_3:19556450-19556469 Msa0804000:intron 25.0%
! GAAAGATTCCAATTAAAATC+AGG - chr5_3:19556495-19556514 None:intergenic 25.0%
! ATGAACTTGATAAGAAGAAA+TGG + chr5_3:19556833-19556852 Msa0804000:CDS 25.0%
! TGAACTTGATAAGAAGAAAT+GGG + chr5_3:19556834-19556853 Msa0804000:CDS 25.0%
! AATCCCTGAATTAAATAAGA+TGG + chr5_3:19557041-19557060 Msa0804000:CDS 25.0%
! AAAAATCATTCAGATTTGAC+AGG + chr5_3:19557546-19557565 Msa0804000:CDS 25.0%
! AAAATCATTCAGATTTGACA+GGG + chr5_3:19557547-19557566 Msa0804000:CDS 25.0%
! ATTATTGTCATATTAGTTCG+CGG + chr5_3:19557645-19557664 Msa0804000:intron 25.0%
!!! TAGTCCCTGTTTTAAAAAAT+AGG + chr5_3:19557728-19557747 Msa0804000:intron 25.0%
! CATTGAAATATCCATTTCTT+AGG + chr5_3:19557760-19557779 Msa0804000:intron 25.0%
! TGTCATAACGTTATATTTAC+AGG - chr5_3:19557866-19557885 None:intergenic 25.0%
!!! GTATTATTTGATTTGCATTG+TGG - chr5_3:19558089-19558108 None:intergenic 25.0%
! ATTTAATAAATTTCACGCTC+TGG + chr5_3:19558109-19558128 Msa0804000:intron 25.0%
! TTCCTTCAAATTCAATCTTA+TGG - chr5_3:19558236-19558255 None:intergenic 25.0%
! TAAGATTGAATTTGAAGGAA+TGG + chr5_3:19558236-19558255 Msa0804000:intron 25.0%
! ATTTAATAAATTTCACGCTC+TGG + chr5_3:19558109-19558128 Msa0804000:intron 25.0%
! TTCCTTCAAATTCAATCTTA+TGG - chr5_3:19558236-19558255 None:intergenic 25.0%
! ATTTAATAAATTTCACGCTC+TGG + chr5_3:19558109-19558128 Msa0804000:intron 25.0%
! TTCCTTCAAATTCAATCTTA+TGG - chr5_3:19558236-19558255 None:intergenic 25.0%
! ATTTAATAAATTTCACGCTC+TGG + chr5_3:19558109-19558128 Msa0804000:intron 25.0%
! TTCCTTCAAATTCAATCTTA+TGG - chr5_3:19558236-19558255 None:intergenic 25.0%
! TAAGATTGAATTTGAAGGAA+TGG + chr5_3:19558236-19558255 Msa0804000:intron 25.0%
! AACAGGAAAAACATTTACTA+TGG + chr5_3:19559253-19559272 Msa0804000:CDS 25.0%
! ATATTTCATTTGCAACAGTT+TGG + chr5_3:19559467-19559486 Msa0804000:intron 25.0%
!! GTTGTATCGAAATTGTTATT+AGG + chr5_3:19559557-19559576 Msa0804000:intron 25.0%
!! TATCGAAATTGTTATTAGGT+TGG + chr5_3:19559561-19559580 Msa0804000:intron 25.0%
! CTAGAAATTGTAAAGAAATG+GGG - chr5_3:19559764-19559783 None:intergenic 25.0%
! GACTAGAAATTGTAAAGAAA+TGG - chr5_3:19559766-19559785 None:intergenic 25.0%
! GACAGTAAAGAGTAATTAAT+AGG - chr5_3:19560082-19560101 None:intergenic 25.0%
! TTAATTACTCTTTACTGTCA+CGG + chr5_3:19560083-19560102 Msa0804000:intron 25.0%
! CAATATAATCCTACAAAAAC+TGG - chr5_3:19560267-19560286 None:intergenic 25.0%
!! CAGTTTTTGTAGGATTATAT+TGG + chr5_3:19560265-19560284 Msa0804000:intron 25.0%
!! TCTTTTCTTGTAGATTTTTG+TGG - chr5_3:19560692-19560711 None:intergenic 25.0%
! GAAAAGATTAAAGAACTTGA+AGG + chr5_3:19560705-19560724 Msa0804000:CDS 25.0%
! TCAATTATGTGAAAAGTTGA+AGG + chr5_3:19560779-19560798 Msa0804000:CDS 25.0%
! CAATTATGTGAAAAGTTGAA+GGG + chr5_3:19560780-19560799 Msa0804000:CDS 25.0%
! AATAAAGAATTAGAGAAGAG+TGG - chr5_3:19561196-19561215 None:intergenic 25.0%
! CAATCATAAGATGCATATAT+TGG + chr5_3:19561245-19561264 Msa0804000:intron 25.0%
! TTTGACTGAAACAATTAGTT+TGG + chr5_3:19561289-19561308 Msa0804000:intron 25.0%
!! ATCTTCCTTTCTAAAAGATA+AGG + chr5_3:19561407-19561426 Msa0804000:CDS 25.0%
! GCTTCATATTATTTAGATCA+AGG + chr5_3:19561516-19561535 Msa0804000:intron 25.0%
!! CATTTTATGTAGTTCAAACT+CGG + chr5_3:19561979-19561998 Msa0804000:CDS 25.0%
! AGTGATTATGTCATATTGAA+TGG + chr5_3:19562463-19562482 Msa0804000:three_prime_UTR 25.0%
!! CACCCATATTATAATTTTTG+AGG - chr5_3:19562505-19562524 None:intergenic 25.0%
! CTCAAAAATTATAATATGGG+TGG + chr5_3:19562503-19562522 Msa0804000:three_prime_UTR 25.0%
!! TTTAGAGTGGTCAAAATATA+GGG - chr5_3:19562586-19562605 None:intergenic 25.0%
!! ATTATTTAGTCACTTTAGAG+TGG - chr5_3:19562599-19562618 None:intergenic 25.0%
CTCTCAAACGAATTTCAAAA+TGG + chr5_3:19555128-19555147 Msa0804000:exon 30.0%
TGAAATTCGTTGGATTGAAT+CGG - chr5_3:19555156-19555175 None:intergenic 30.0%
TTAAGTCCTTTCGTAATTCT+TGG - chr5_3:19555603-19555622 None:intergenic 30.0%
GTGTGTAATGTTTGTAAATG+CGG + chr5_3:19555692-19555711 Msa0804000:CDS 30.0%
TGTGTAATGTTTGTAAATGC+GGG + chr5_3:19555693-19555712 Msa0804000:CDS 30.0%
!! GTTACTCAGCAATTTGTTAT+TGG + chr5_3:19556301-19556320 Msa0804000:intron 30.0%
TTACATTCAATGAAATCGCT+TGG - chr5_3:19556359-19556378 None:intergenic 30.0%
AACTGAAATGAGTAGGAAAA+TGG + chr5_3:19556627-19556646 Msa0804000:CDS 30.0%
CACATTAATCTAACTGAGAA+AGG - chr5_3:19556753-19556772 None:intergenic 30.0%
ATCTATTAGAAATACTCCTC+AGG - chr5_3:19556813-19556832 None:intergenic 30.0%
AGAAGCAATTATCAGTTTAC+AGG + chr5_3:19556858-19556877 Msa0804000:CDS 30.0%
CAGTTTACAGGAAAAAGTAA+AGG + chr5_3:19556870-19556889 Msa0804000:CDS 30.0%
AGTAGTTTGAATCGTGTTAA+AGG + chr5_3:19557164-19557183 Msa0804000:intron 30.0%
GTAGTTTGAATCGTGTTAAA+GGG + chr5_3:19557165-19557184 Msa0804000:intron 30.0%
GACATTTCAACCTTATTCAA+TGG - chr5_3:19557449-19557468 None:intergenic 30.0%
TATACACCAAAAGATGATCA+AGG + chr5_3:19557572-19557591 Msa0804000:CDS 30.0%
AGTTCGCGGAAATAAATATA+TGG + chr5_3:19557659-19557678 Msa0804000:intron 30.0%
! TTTAAAACAGGGACTAAACT+TGG - chr5_3:19557724-19557743 None:intergenic 30.0%
CTTTGCATCCTACAAAATTT+AGG - chr5_3:19557834-19557853 None:intergenic 30.0%
TTCAAAAACTCAAGTCACAA+GGG - chr5_3:19557905-19557924 None:intergenic 30.0%
ATTCAAAAACTCAAGTCACA+AGG - chr5_3:19557906-19557925 None:intergenic 30.0%
AGGAATGTTTGGTACAATTT+GGG - chr5_3:19558010-19558029 None:intergenic 30.0%
CTCCATAAGATTGAATTTGA+AGG + chr5_3:19558231-19558250 Msa0804000:intron 30.0%
!!! GTTTTAAAGAAGATACGGAA+TGG + chr5_3:19558279-19558298 Msa0804000:intron 30.0%
AGAAACCCTTCTTCAAAAAA+AGG + chr5_3:19558304-19558323 Msa0804000:intron 30.0%
!!! CCATTCCTTTTTTTGAAGAA+GGG - chr5_3:19558312-19558331 None:intergenic 30.0%
!!! TCCATTCCTTTTTTTGAAGA+AGG - chr5_3:19558313-19558332 None:intergenic 30.0%
CTCCATAAGATTGAATTTGA+AGG + chr5_3:19558231-19558250 Msa0804000:intron 30.0%
CTCCATAAGATTGAATTTGA+AGG + chr5_3:19558231-19558250 Msa0804000:intron 30.0%
CTCCATAAGATTGAATTTGA+AGG + chr5_3:19558231-19558250 Msa0804000:intron 30.0%
!!! GTTTTAAAGAAGATACGGAA+TGG + chr5_3:19558279-19558298 Msa0804000:intron 30.0%
AGAAACCCTTCTTCAAAAAA+AGG + chr5_3:19558304-19558323 Msa0804000:intron 30.0%
!!! CCATTCCTTTTTTTGAAGAA+GGG - chr5_3:19558312-19558331 None:intergenic 30.0%
!!! TCCATTCCTTTTTTTGAAGA+AGG - chr5_3:19558313-19558332 None:intergenic 30.0%
TCTACAACAACAATTCCATT+CGG - chr5_3:19558892-19558911 None:intergenic 30.0%
ATGGATAAATTAGTAACTGC+TGG + chr5_3:19559041-19559060 Msa0804000:intron 30.0%
!! AAGTTTTCTAAGAACAGTGT+TGG + chr5_3:19559132-19559151 Msa0804000:intron 30.0%
GGAAAAACATTTACTATGGA+AGG + chr5_3:19559257-19559276 Msa0804000:CDS 30.0%
! AGAATAGAGGTGTAAATTAC+AGG + chr5_3:19559288-19559307 Msa0804000:CDS 30.0%
! GCATTTGTTTAGAGTTAGTA+AGG + chr5_3:19559319-19559338 Msa0804000:CDS 30.0%
! TGTTTAGAGTTAGTAAGGAA+AGG + chr5_3:19559324-19559343 Msa0804000:CDS 30.0%
! AAAGGTTACCTTTTTGATGT+TGG - chr5_3:19559431-19559450 None:intergenic 30.0%
ATCAATGACAAACTCAACAA+AGG - chr5_3:19559449-19559468 None:intergenic 30.0%
ATTCAGCATGCTATGTATAA+TGG + chr5_3:19559852-19559871 Msa0804000:intron 30.0%
AAAGTAGTCACATTCCTTAT+AGG + chr5_3:19560052-19560071 Msa0804000:CDS 30.0%
!! GTGTGTGTTGTTTATTTGTT+AGG + chr5_3:19560233-19560252 Msa0804000:intron 30.0%
GTATGTTTGTATCATATTGC+AGG + chr5_3:19560304-19560323 Msa0804000:intron 30.0%
! GTATCAATTTGCTTCTTAAC+AGG - chr5_3:19560442-19560461 None:intergenic 30.0%
GTTAAGAAGCAAATTGATAC+AGG + chr5_3:19560442-19560461 Msa0804000:CDS 30.0%
ACTTCAAAAGACAAAAGCAA+TGG + chr5_3:19560468-19560487 Msa0804000:CDS 30.0%
TAAATTGTTCATAAGGCATG+AGG - chr5_3:19560533-19560552 None:intergenic 30.0%
GAATTCTTCCTTATACACTT+TGG + chr5_3:19560557-19560576 Msa0804000:intron 30.0%
!! CGAGATTATTATTTGACTTG+TGG + chr5_3:19560851-19560870 Msa0804000:intron 30.0%
AAGACACATGCTTATATTGA+AGG + chr5_3:19561075-19561094 Msa0804000:intron 30.0%
TTGTTTCAGTCAAACAAAGA+AGG - chr5_3:19561283-19561302 None:intergenic 30.0%
TTGTATGTTATTGCAGGTTT+GGG + chr5_3:19561338-19561357 Msa0804000:intron 30.0%
!! GACAACCTTATCTTTTAGAA+AGG - chr5_3:19561415-19561434 None:intergenic 30.0%
ATATTCTTTGCCGTTGTTAT+GGG + chr5_3:19561462-19561481 Msa0804000:intron 30.0%
CTCAAAATATCCCATAACAA+CGG - chr5_3:19561475-19561494 None:intergenic 30.0%
! TAGTACTCCTTTTCAATGTA+TGG - chr5_3:19561719-19561738 None:intergenic 30.0%
! AAGGTTCTGCTTTGTTAAAA+GGG + chr5_3:19562020-19562039 Msa0804000:CDS 30.0%
GACATTGAGAACAATTTAGT+CGG + chr5_3:19562091-19562110 Msa0804000:CDS 30.0%
ACATTGAGAACAATTTAGTC+GGG + chr5_3:19562092-19562111 Msa0804000:CDS 30.0%
! CATTTTTCTATCACGTAAAG+TGG - chr5_3:19562128-19562147 None:intergenic 30.0%
TACGTGATAGAAAAATGACA+AGG + chr5_3:19562131-19562150 Msa0804000:CDS 30.0%
! CTACCAGTTCTTACAATTTT+AGG - chr5_3:19562169-19562188 None:intergenic 30.0%
CTAAAATTGTAAGAACTGGT+AGG + chr5_3:19562167-19562186 Msa0804000:CDS 30.0%
GGGATAGTAAGAAAAAGATA+TGG + chr5_3:19562284-19562303 Msa0804000:CDS 30.0%
GAAAAAGATATGGTCAAGAT+AGG + chr5_3:19562294-19562313 Msa0804000:CDS 30.0%
! TTTTCATCCATCACAAGAAA+AGG - chr5_3:19562394-19562413 None:intergenic 30.0%
! TTTGAGGTAGAGTATAATTG+TGG - chr5_3:19562489-19562508 None:intergenic 30.0%
AAAATATAGGGAATAGATGG+AGG - chr5_3:19562574-19562593 None:intergenic 30.0%
GTCAAAATATAGGGAATAGA+TGG - chr5_3:19562577-19562596 None:intergenic 30.0%
!! CTTTAGAGTGGTCAAAATAT+AGG - chr5_3:19562587-19562606 None:intergenic 30.0%
!! TTCTTGTTGGTTTGGGATTA+GGG - chr5_3:19555193-19555212 None:intergenic 35.0%
!! CTGAATCTTCTTGTTGGTTT+GGG - chr5_3:19555200-19555219 None:intergenic 35.0%
! ACTGAATCTTCTTGTTGGTT+TGG - chr5_3:19555201-19555220 None:intergenic 35.0%
CCATTACTGAATCTTCTTGT+TGG - chr5_3:19555206-19555225 None:intergenic 35.0%
CCAACAAGAAGATTCAGTAA+TGG + chr5_3:19555203-19555222 Msa0804000:CDS 35.0%
AACAAGCATAGAATCGAACA+AGG - chr5_3:19555244-19555263 None:intergenic 35.0%
TTCACCAGATCTCAAAATTC+AGG + chr5_3:19555294-19555313 Msa0804000:CDS 35.0%
!!! CTAACCTGAATTTTGAGATC+TGG - chr5_3:19555301-19555320 None:intergenic 35.0%
GGGAATTGTACTTAGAAAGA+GGG - chr5_3:19555402-19555421 None:intergenic 35.0%
TGGGAATTGTACTTAGAAAG+AGG - chr5_3:19555403-19555422 None:intergenic 35.0%
TAATGTTTGTAAATGCGGGA+GGG + chr5_3:19555697-19555716 Msa0804000:CDS 35.0%
!!! CTGAGTGACACTTTTTTTGA+CGG + chr5_3:19555756-19555775 Msa0804000:CDS 35.0%
TCAACAAAATATTGTCCAGG+AGG - chr5_3:19555888-19555907 None:intergenic 35.0%
AGGTCAACAAAATATTGTCC+AGG - chr5_3:19555891-19555910 None:intergenic 35.0%
ATTAATGTAAATGGGCCGAA+AGG + chr5_3:19555927-19555946 Msa0804000:CDS 35.0%
ATTGTAATATTATGGCTGGC+AGG + chr5_3:19556053-19556072 Msa0804000:intron 35.0%
!!! TGCTTGATTAGTTTTTCCAG+TGG + chr5_3:19556271-19556290 Msa0804000:intron 35.0%
!! CAGCAATTTGTTATTGGCTA+CGG + chr5_3:19556307-19556326 Msa0804000:intron 35.0%
GATTGAAATTCCTTCATCAC+AGG + chr5_3:19556394-19556413 Msa0804000:CDS 35.0%
CAAAGCAAAAGAATGCTATG+AGG + chr5_3:19556591-19556610 Msa0804000:CDS 35.0%
CGTCATTAACTGAAATGAGT+AGG + chr5_3:19556620-19556639 Msa0804000:CDS 35.0%
GAAAATGGAAAAAGTCCAGA+TGG + chr5_3:19556642-19556661 Msa0804000:CDS 35.0%
ACATTTAAGTCACTCACTAC+AGG + chr5_3:19556679-19556698 Msa0804000:CDS 35.0%
TAAGATGGTTTATGCAGTAC+AGG + chr5_3:19557056-19557075 Msa0804000:CDS 35.0%
AATGAAGTTCAAGAGGCTAA+AGG + chr5_3:19557272-19557291 Msa0804000:CDS 35.0%
TGCTTCTGTTATGAAAACAC+AGG + chr5_3:19557395-19557414 Msa0804000:intron 35.0%
GCTTCTGTTATGAAAACACA+GGG + chr5_3:19557396-19557415 Msa0804000:intron 35.0%
AATAAGGTTGAAATGTCAGC+TGG + chr5_3:19557452-19557471 Msa0804000:CDS 35.0%
ATAAGGTTGAAATGTCAGCT+GGG + chr5_3:19557453-19557472 Msa0804000:CDS 35.0%
!! GATTTTGATGCAGCAAAAGA+TGG + chr5_3:19557491-19557510 Msa0804000:CDS 35.0%
! TGCATACCTTGATCATCTTT+TGG - chr5_3:19557581-19557600 None:intergenic 35.0%
GGATTAATAGGCCTAAGAAA+TGG - chr5_3:19557774-19557793 None:intergenic 35.0%
CACCTATTTGGAGGATTAAT+AGG - chr5_3:19557786-19557805 None:intergenic 35.0%
TTCCATGTGTAGTCACTATT+TGG - chr5_3:19557809-19557828 None:intergenic 35.0%
AAATAGTGACTACACATGGA+AGG + chr5_3:19557808-19557827 Msa0804000:intron 35.0%
! ATGGAAGGCCTAAATTTTGT+AGG + chr5_3:19557823-19557842 Msa0804000:intron 35.0%
CAGGAATGTTTGGTACAATT+TGG - chr5_3:19558011-19558030 None:intergenic 35.0%
TTTGAAGGAATGGAGAAATG+AGG + chr5_3:19558246-19558265 Msa0804000:intron 35.0%
CCCTTCTTCAAAAAAAGGAA+TGG + chr5_3:19558309-19558328 Msa0804000:intron 35.0%
TTTGAAGGAATGGAGAAATG+AGG + chr5_3:19558246-19558265 Msa0804000:intron 35.0%
CCCTTCTTCAAAAAAAGGAA+TGG + chr5_3:19558309-19558328 Msa0804000:intron 35.0%
! ACTCAATATCGGTTACTGAA+CGG - chr5_3:19558944-19558963 None:intergenic 35.0%
! TTTTGCTGATGCATCATCAA+TGG + chr5_3:19559175-19559194 Msa0804000:CDS 35.0%
AACGTTTGCATCTTTGCTTA+TGG + chr5_3:19559221-19559240 Msa0804000:CDS 35.0%
ATCTTTGCTTATGGACAAAC+AGG + chr5_3:19559230-19559249 Msa0804000:CDS 35.0%
TGAACAAATCAGAGACCTAT+TGG + chr5_3:19559397-19559416 Msa0804000:CDS 35.0%
AACATAGTAGTCGATCTCAT+TGG + chr5_3:19559719-19559738 Msa0804000:CDS 35.0%
!!! ACTACTTTTTGCAGCTAAAG+CGG - chr5_3:19560040-19560059 None:intergenic 35.0%
AACAACACACACAAAGAAAG+CGG - chr5_3:19560225-19560244 None:intergenic 35.0%
! GAGTAAGATCCAGTTTTTGT+AGG + chr5_3:19560255-19560274 Msa0804000:intron 35.0%
TGTTTGTATCATATTGCAGG+AGG + chr5_3:19560307-19560326 Msa0804000:intron 35.0%
TTAACTTTGCAACTAGAGTG+AGG + chr5_3:19560401-19560420 Msa0804000:CDS 35.0%
TAACTTTGCAACTAGAGTGA+GGG + chr5_3:19560402-19560421 Msa0804000:CDS 35.0%
CAAAAGACAAAAGCAATGGT+AGG + chr5_3:19560472-19560491 Msa0804000:intron 35.0%
AAGCTATGCCAAAGTGTATA+AGG - chr5_3:19560568-19560587 None:intergenic 35.0%
GAAGTAAAGAAGAATCCTTG+AGG + chr5_3:19560610-19560629 Msa0804000:CDS 35.0%
GCTTTCTTCTAATTTCCTCA+AGG - chr5_3:19560628-19560647 None:intergenic 35.0%
CTTGCAAAACATTGAGAGTA+AGG + chr5_3:19560647-19560666 Msa0804000:CDS 35.0%
!!! TTTCTCTGATTGGTTTTGCA+TGG - chr5_3:19560751-19560770 None:intergenic 35.0%
! GAGAAACTTGTTTCTCTGAT+TGG - chr5_3:19560761-19560780 None:intergenic 35.0%
! TTGGTTGTGTATCATGGTTT+TGG + chr5_3:19560899-19560918 Msa0804000:intron 35.0%
!! TGGTTCCTTGCTTTTGTTAT+TGG + chr5_3:19561025-19561044 Msa0804000:intron 35.0%
!!! GGTTCCTTGCTTTTGTTATT+GGG + chr5_3:19561026-19561045 Msa0804000:intron 35.0%
ATGTGTTACAAACCTTCTGT+TGG - chr5_3:19561156-19561175 None:intergenic 35.0%
AAAGAATTAGAGAAGAGTGG+AGG - chr5_3:19561193-19561212 None:intergenic 35.0%
! TGTTCTTCATGCTAAGGTTT+TGG - chr5_3:19561223-19561242 None:intergenic 35.0%
ATTGCATGTTCTTCATGCTA+AGG - chr5_3:19561229-19561248 None:intergenic 35.0%
CAGTTCTTGTATGTTATTGC+AGG + chr5_3:19561332-19561351 Msa0804000:intron 35.0%
CTTGTATGTTATTGCAGGTT+TGG + chr5_3:19561337-19561356 Msa0804000:intron 35.0%
GATATTCTTTGCCGTTGTTA+TGG + chr5_3:19561461-19561480 Msa0804000:intron 35.0%
GAAGCGATGAACATAAAAAG+AGG - chr5_3:19561501-19561520 None:intergenic 35.0%
!!! TAGTACCTGTTGTTTTAGCA+AGG - chr5_3:19561584-19561603 None:intergenic 35.0%
! ACTCCTTTTCAATGTATGGA+GGG - chr5_3:19561715-19561734 None:intergenic 35.0%
! TACTCCTTTTCAATGTATGG+AGG - chr5_3:19561716-19561735 None:intergenic 35.0%
CAAAGATGCCAGATAGAAAA+TGG - chr5_3:19561755-19561774 None:intergenic 35.0%
ATGCGACTCTCAATATCATT+TGG - chr5_3:19561962-19561981 None:intergenic 35.0%
! CAAGGTTCTGCTTTGTTAAA+AGG + chr5_3:19562019-19562038 Msa0804000:CDS 35.0%
! CCAGTTCTTACAATTTTAGG+CGG - chr5_3:19562166-19562185 None:intergenic 35.0%
! CTAGCTCTCTTATGAGATAA+AGG - chr5_3:19562229-19562248 None:intergenic 35.0%
GTAACAACAGTTGCTGATAT+TGG + chr5_3:19562332-19562351 Msa0804000:three_prime_UTR 35.0%
AGGGTCATTGTGAAATTCGT+TGG - chr5_3:19555166-19555185 None:intergenic 40.0%
!! CTTCTTGTTGGTTTGGGATT+AGG - chr5_3:19555194-19555213 None:intergenic 40.0%
GTAATGTTTGTAAATGCGGG+AGG + chr5_3:19555696-19555715 Msa0804000:CDS 40.0%
AATGTTTGTAAATGCGGGAG+GGG + chr5_3:19555698-19555717 Msa0804000:CDS 40.0%
!!! AGTGACACTTTTTTTGACGG+TGG + chr5_3:19555759-19555778 Msa0804000:CDS 40.0%
CAAAATATTGTCCAGGAGGA+AGG - chr5_3:19555884-19555903 None:intergenic 40.0%
TTGAACACCCTCATTCCTTT+CGG - chr5_3:19555945-19555964 None:intergenic 40.0%
TTGGATATCTATGCAGCTGT+TGG + chr5_3:19556087-19556106 Msa0804000:CDS 40.0%
CACTACAGCTGATTGATTGT+CGG + chr5_3:19556121-19556140 Msa0804000:CDS 40.0%
ACTACAGCTGATTGATTGTC+GGG + chr5_3:19556122-19556141 Msa0804000:CDS 40.0%
TTGTTAGTGGGATCTGCATT+AGG + chr5_3:19556205-19556224 Msa0804000:CDS 40.0%
CTGAGTAACTTCAATACCAC+TGG - chr5_3:19556290-19556309 None:intergenic 40.0%
ATTCCTTCATCACAGGTTAG+AGG + chr5_3:19556401-19556420 Msa0804000:intron 40.0%
TCAAACAGCCACATATCAAC+TGG - chr5_3:19556433-19556452 None:intergenic 40.0%
GACACATTCATGTGCTTCAA+AGG - chr5_3:19557016-19557035 None:intergenic 40.0%
GTTTATGCAGTACAGGAGTT+GGG + chr5_3:19557063-19557082 Msa0804000:CDS 40.0%
GCTCTTCAATGAAGTTCAAG+AGG + chr5_3:19557265-19557284 Msa0804000:CDS 40.0%
CCTTATTCAATGGACGACAA+CGG - chr5_3:19557439-19557458 None:intergenic 40.0%
! AGATGGATGCCTTGGAATTT+TGG + chr5_3:19557508-19557527 Msa0804000:CDS 40.0%
GGCCTATTAATCCTCCAAAT+AGG + chr5_3:19557781-19557800 Msa0804000:intron 40.0%
ACTATTTGGCACCTATTTGG+AGG - chr5_3:19557795-19557814 None:intergenic 40.0%
GTCACTATTTGGCACCTATT+TGG - chr5_3:19557798-19557817 None:intergenic 40.0%
TGCCAAATAGTGACTACACA+TGG + chr5_3:19557804-19557823 Msa0804000:intron 40.0%
!! AGGTTTTGTGCAGGAATGTT+TGG - chr5_3:19558021-19558040 None:intergenic 40.0%
TAAATTTCACGCTCTGGCAA+AGG + chr5_3:19558115-19558134 Msa0804000:intron 40.0%
AAATTTCACGCTCTGGCAAA+GGG + chr5_3:19558116-19558135 Msa0804000:intron 40.0%
TAAATTTCACGCTCTGGCAA+AGG + chr5_3:19558115-19558134 Msa0804000:intron 40.0%
AAATTTCACGCTCTGGCAAA+GGG + chr5_3:19558116-19558135 Msa0804000:intron 40.0%
TAAATTTCACGCTCTGGCAA+AGG + chr5_3:19558115-19558134 Msa0804000:intron 40.0%
AAATTTCACGCTCTGGCAAA+GGG + chr5_3:19558116-19558135 Msa0804000:intron 40.0%
TAAATTTCACGCTCTGGCAA+AGG + chr5_3:19558115-19558134 Msa0804000:intron 40.0%
AAATTTCACGCTCTGGCAAA+GGG + chr5_3:19558116-19558135 Msa0804000:intron 40.0%
AGGAATGGAGAAAAACCGAA+TGG + chr5_3:19558874-19558893 Msa0804000:intron 40.0%
! CTCAATATCGGTTACTGAAC+GGG - chr5_3:19558943-19558962 None:intergenic 40.0%
ATCAATGGTAATCTCTGTGC+TGG + chr5_3:19559190-19559209 Msa0804000:CDS 40.0%
! AATCAGAGACCTATTGGCTA+CGG + chr5_3:19559403-19559422 Msa0804000:CDS 40.0%
GTCACTTATGTTGTCAACCT+TGG - chr5_3:19559638-19559657 None:intergenic 40.0%
TTGACAACATAAGTGACGTG+TGG + chr5_3:19559641-19559660 Msa0804000:CDS 40.0%
ATGGGGAAAATGCATTAGCT+TGG - chr5_3:19559747-19559766 None:intergenic 40.0%
AGTGTACCAAGAGCAAACTT+TGG + chr5_3:19559902-19559921 Msa0804000:CDS 40.0%
!! CAAACTTTGGCTTGTGGATT+TGG + chr5_3:19559915-19559934 Msa0804000:CDS 40.0%
CATTTACTCCAAGACTCACT+AGG + chr5_3:19560184-19560203 Msa0804000:CDS 40.0%
TAGACATACCTAGTGAGTCT+TGG - chr5_3:19560195-19560214 None:intergenic 40.0%
ACAAATAAGTCCATCAGACC+AGG + chr5_3:19560354-19560373 Msa0804000:CDS 40.0%
AACTTTGCAACTAGAGTGAG+GGG + chr5_3:19560403-19560422 Msa0804000:CDS 40.0%
AAACATTGAGAGTAAGGCCA+AGG + chr5_3:19560653-19560672 Msa0804000:CDS 40.0%
AACATTGAGAGTAAGGCCAA+GGG + chr5_3:19560654-19560673 Msa0804000:CDS 40.0%
GTGGATATTATCCTTTCCCT+TGG - chr5_3:19560673-19560692 None:intergenic 40.0%
!! TGGATGTTTTGAGCTCAATC+TGG - chr5_3:19560731-19560750 None:intergenic 40.0%
! CTTATGTTGAAGAGTACAGC+AGG - chr5_3:19560817-19560836 None:intergenic 40.0%
CTGCTGTACTCTTCAACATA+AGG + chr5_3:19560815-19560834 Msa0804000:CDS 40.0%
! GCAACATTGGTTGTGTATCA+TGG + chr5_3:19560893-19560912 Msa0804000:intron 40.0%
!!! TCCTTGCTTTTGTTATTGGG+TGG + chr5_3:19561029-19561048 Msa0804000:intron 40.0%
!!! CCTTGCTTTTGTTATTGGGT+GGG + chr5_3:19561030-19561049 Msa0804000:intron 40.0%
GACAGCAAATTTCCAACAGA+AGG + chr5_3:19561141-19561160 Msa0804000:CDS 40.0%
AAGCTGAAAGATCAGTTGCA+AGG + chr5_3:19561372-19561391 Msa0804000:CDS 40.0%
AGCTGAAAGATCAGTTGCAA+GGG + chr5_3:19561373-19561392 Msa0804000:CDS 40.0%
TGAGAGAAAACTGAAAGAGC+AGG + chr5_3:19561543-19561562 Msa0804000:CDS 40.0%
GGAATCCTTGCTAAAACAAC+AGG + chr5_3:19561576-19561595 Msa0804000:CDS 40.0%
! CTCCTTTTCAATGTATGGAG+GGG - chr5_3:19561714-19561733 None:intergenic 40.0%
CTGTTATGTTGAAGCCGTAA+AGG + chr5_3:19561889-19561908 Msa0804000:CDS 40.0%
TTATGTTGAAGCCGTAAAGG+TGG + chr5_3:19561892-19561911 Msa0804000:CDS 40.0%
! GCTTTTACCTATATCAGGTG+TGG - chr5_3:19561921-19561940 None:intergenic 40.0%
TTGGAGATTCATCACTTGTG+CGG - chr5_3:19561943-19561962 None:intergenic 40.0%
AAGCAGAACCTTGACTTATC+TGG - chr5_3:19562012-19562031 None:intergenic 40.0%
CTCAGCAGATGAGAAACAAA+AGG + chr5_3:19562053-19562072 Msa0804000:CDS 40.0%
CTATCACGTAAAGTGGATGA+CGG - chr5_3:19562121-19562140 None:intergenic 40.0%
CCGCCTAAAATTGTAAGAAC+TGG + chr5_3:19562163-19562182 Msa0804000:CDS 40.0%
GGAACTTGACTAGTAATGAC+CGG - chr5_3:19562208-19562227 None:intergenic 40.0%
! ATCTCCACCTTTTCTTGTGA+TGG + chr5_3:19562384-19562403 Msa0804000:three_prime_UTR 40.0%
TCATCCATCACAAGAAAAGG+TGG - chr5_3:19562391-19562410 None:intergenic 40.0%
ACTCACTCATGATACTGTCA+CGG - chr5_3:19562734-19562753 None:intergenic 40.0%
! AGATGACGAGAAAGTGTGAG+CGG - chr5_3:19555088-19555107 None:intergenic 45.0%
! GGTTTGGGATTAGGGTTTGA+GGG - chr5_3:19555185-19555204 None:intergenic 45.0%
! TGGTTTGGGATTAGGGTTTG+AGG - chr5_3:19555186-19555205 None:intergenic 45.0%
! CAATGTTTTCCGCACGAATG+AGG + chr5_3:19555782-19555801 Msa0804000:CDS 45.0%
GAGCTGACTGATAAATCGAC+GGG - chr5_3:19555830-19555849 None:intergenic 45.0%
CGAGCTGACTGATAAATCGA+CGG - chr5_3:19555831-19555850 None:intergenic 45.0%
!! CGTCGATTTATCAGTCAGCT+CGG + chr5_3:19555829-19555848 Msa0804000:CDS 45.0%
! GTCGATTTATCAGTCAGCTC+GGG + chr5_3:19555830-19555849 Msa0804000:CDS 45.0%
ATTTATCAGTCAGCTCGGGT+GGG + chr5_3:19555834-19555853 Msa0804000:CDS 45.0%
AGAATTGACAACCTTCCTCC+TGG + chr5_3:19555870-19555889 Msa0804000:CDS 45.0%
TAAATGGGCCGAAAGGAATG+AGG + chr5_3:19555934-19555953 Msa0804000:CDS 45.0%
AAATGGGCCGAAAGGAATGA+GGG + chr5_3:19555935-19555954 Msa0804000:CDS 45.0%
CTGGCAGGTTCTATCTGAAT+TGG + chr5_3:19556068-19556087 Msa0804000:intron 45.0%
CGACAATCAATCAGCTGTAG+TGG - chr5_3:19556123-19556142 None:intergenic 45.0%
AATGGAAGCCCAGTTGTTAG+TGG + chr5_3:19556192-19556211 Msa0804000:CDS 45.0%
ATGGAAGCCCAGTTGTTAGT+GGG + chr5_3:19556193-19556212 Msa0804000:CDS 45.0%
TGCAGATCCCACTAACAACT+GGG - chr5_3:19556203-19556222 None:intergenic 45.0%
ATGCAGATCCCACTAACAAC+TGG - chr5_3:19556204-19556223 None:intergenic 45.0%
TCAATGAAATCGCTTGGCAC+TGG - chr5_3:19556353-19556372 None:intergenic 45.0%
ACACCTCTAACCTGTGATGA+AGG - chr5_3:19556407-19556426 None:intergenic 45.0%
! GGTGTACACCAGTTGATATG+TGG + chr5_3:19556422-19556441 Msa0804000:intron 45.0%
CAAAAGAATGCTATGAGGCG+TGG + chr5_3:19556596-19556615 Msa0804000:CDS 45.0%
TCACTTGATCAAGCTCCATC+TGG - chr5_3:19556660-19556679 None:intergenic 45.0%
! CACTCACTACAGGTATTGCA+CGG + chr5_3:19556689-19556708 Msa0804000:intron 45.0%
! CAGGTTCTCAGCTTGTTTCT+CGG - chr5_3:19556794-19556813 None:intergenic 45.0%
AGAAACAAGCTGAGAACCTG+AGG + chr5_3:19556794-19556813 Msa0804000:CDS 45.0%
TGATGAAGAGTGAGCAGTCT+CGG + chr5_3:19556986-19557005 Msa0804000:CDS 45.0%
GGTTTATGCAGTACAGGAGT+TGG + chr5_3:19557062-19557081 Msa0804000:CDS 45.0%
CCGTTGTCGTCCATTGAATA+AGG + chr5_3:19557436-19557455 Msa0804000:CDS 45.0%
AATGTCAGCTGGGTGTACAA+CGG + chr5_3:19557463-19557482 Msa0804000:CDS 45.0%
!! TGCCTTGGAATTTTGGCAAC+TGG + chr5_3:19557515-19557534 Msa0804000:CDS 45.0%
AGCCAGTTGCCAAAATTCCA+AGG - chr5_3:19557520-19557539 None:intergenic 45.0%
GATTGTGAGCATGTGAAGGA+TGG - chr5_3:19557988-19558007 None:intergenic 45.0%
TTGGGATTGTGAGCATGTGA+AGG - chr5_3:19557992-19558011 None:intergenic 45.0%
!! TGCTACATCAGGTTTTGTGC+AGG - chr5_3:19558030-19558049 None:intergenic 45.0%
! TTAGTGAGCCACATTTGCTG+TGG - chr5_3:19558062-19558081 None:intergenic 45.0%
AATTTCACGCTCTGGCAAAG+GGG + chr5_3:19558117-19558136 Msa0804000:intron 45.0%
AATTTCACGCTCTGGCAAAG+GGG + chr5_3:19558117-19558136 Msa0804000:intron 45.0%
AATTTCACGCTCTGGCAAAG+GGG + chr5_3:19558117-19558136 Msa0804000:intron 45.0%
AATTTCACGCTCTGGCAAAG+GGG + chr5_3:19558117-19558136 Msa0804000:intron 45.0%
! AATATCGGTTACTGAACGGG+AGG - chr5_3:19558940-19558959 None:intergenic 45.0%
ATGGTAATCTCTGTGCTGGA+TGG + chr5_3:19559194-19559213 Msa0804000:CDS 45.0%
GCTTATGGACAAACAGGAAC+AGG + chr5_3:19559236-19559255 Msa0804000:CDS 45.0%
GAAGGAACAGAGCAGAATAG+AGG + chr5_3:19559275-19559294 Msa0804000:CDS 45.0%
CATATCTGTTAGTGTGCTCG+AGG + chr5_3:19559367-19559386 Msa0804000:CDS 45.0%
! ATCAGAGACCTATTGGCTAC+GGG + chr5_3:19559404-19559423 Msa0804000:CDS 45.0%
CTACGGGACCAACATCAAAA+AGG + chr5_3:19559420-19559439 Msa0804000:CDS 45.0%
GAAGGACATCATCATGTACC+TGG + chr5_3:19559601-19559620 Msa0804000:CDS 45.0%
! CACAAGCCAAAGTTTGCTCT+TGG - chr5_3:19559911-19559930 None:intergenic 45.0%
!! CAAGAGCAAACTTTGGCTTG+TGG + chr5_3:19559909-19559928 Msa0804000:CDS 45.0%
CTCCAAGAGCAGAAAGAGAT+CGG - chr5_3:19560008-19560027 None:intergenic 45.0%
CCCACCCAATAACAAAAGCA+AGG - chr5_3:19561033-19561052 None:intergenic 45.0%
CAAGCTTATCACGAGTGAAG+TGG + chr5_3:19561653-19561672 Msa0804000:intron 45.0%
CTCCCCTCCATACATTGAAA+AGG + chr5_3:19561709-19561728 Msa0804000:intron 45.0%
ATGGCAGATGAAGGAACTAG+AGG + chr5_3:19561826-19561845 Msa0804000:intron 45.0%
! GTGCGGCTTTTACCTATATC+AGG - chr5_3:19561926-19561945 None:intergenic 45.0%
GTAAACCGCCAGATAAGTCA+AGG + chr5_3:19562001-19562020 Msa0804000:CDS 45.0%
CAGAACCTTGACTTATCTGG+CGG - chr5_3:19562009-19562028 None:intergenic 45.0%
TAGGCTAACAACAAAACCGC+CGG + chr5_3:19562186-19562205 Msa0804000:CDS 45.0%
ACTTGACTAGTAATGACCGG+CGG - chr5_3:19562205-19562224 None:intergenic 45.0%
AGGCTCAAGGAGTTAAAGAG+AGG + chr5_3:19562263-19562282 Msa0804000:CDS 45.0%
GGCTCAAGGAGTTAAAGAGA+GGG + chr5_3:19562264-19562283 Msa0804000:CDS 45.0%
!!! ATTTTTTAATTGTAATATTA+TGG + chr5_3:19556045-19556064 Msa0804000:intron 5.0%
GCGACTAATGAAGGAGCTGA+TGG + chr5_3:19555723-19555742 Msa0804000:CDS 50.0%
!! ACGAATGAGGCGATAGTGGA+AGG + chr5_3:19555795-19555814 Msa0804000:CDS 50.0%
!! AATGAGGCGATAGTGGAAGG+TGG + chr5_3:19555798-19555817 Msa0804000:CDS 50.0%
GATTTATCAGTCAGCTCGGG+TGG + chr5_3:19555833-19555852 Msa0804000:CDS 50.0%
AGGAGAGCGACAAAAGAGTC+AGG + chr5_3:19556225-19556244 Msa0804000:CDS 50.0%
! ATGAAATCGCTTGGCACTGG+TGG - chr5_3:19556350-19556369 None:intergenic 50.0%
GCAGCAAAAGATGGATGCCT+TGG + chr5_3:19557500-19557519 Msa0804000:CDS 50.0%
TGTGAAGGATGGAGTGTGCA+GGG - chr5_3:19557977-19557996 None:intergenic 50.0%
ATGTGAAGGATGGAGTGTGC+AGG - chr5_3:19557978-19557997 None:intergenic 50.0%
ATGTTGGTCCCGTAGCCAAT+AGG - chr5_3:19559415-19559434 None:intergenic 50.0%
!! ACCTGGTGTTGTAGAAGCCA+AGG + chr5_3:19559618-19559637 Msa0804000:CDS 50.0%
ACCTTGGCTTCTACAACACC+AGG - chr5_3:19559622-19559641 None:intergenic 50.0%
GGAAGCAATGCTAGAGCAGT+TGG + chr5_3:19559679-19559698 Msa0804000:CDS 50.0%
!! CTTTGGCTTGTGGATTTGGC+AGG + chr5_3:19559919-19559938 Msa0804000:CDS 50.0%
CTTGCAAAGACTGACGTGCA+AGG + chr5_3:19559952-19559971 Msa0804000:CDS 50.0%
AGTCCATCAGACCAGGATGT+CGG + chr5_3:19560361-19560380 Msa0804000:CDS 50.0%
TGAGAGTAAGGCCAAGGGAA+AGG + chr5_3:19560659-19560678 Msa0804000:CDS 50.0%
GAAAGAGCAGGAGCAGAACT+CGG + chr5_3:19561555-19561574 Msa0804000:CDS 50.0%
ACATGCGTCATGGCAGATGA+AGG + chr5_3:19561817-19561836 Msa0804000:intron 50.0%
ACAAAGAGCGAGAGCAACAG+TGG + chr5_3:19561855-19561874 Msa0804000:CDS 50.0%
TGTTGAAGCCGTAAAGGTGG+CGG + chr5_3:19561895-19561914 Msa0804000:CDS 50.0%
! TCACGTAAAGTGGATGACGG+TGG - chr5_3:19562118-19562137 None:intergenic 50.0%
AGCTAGCACAAGCAGAGATC+AGG + chr5_3:19562243-19562262 Msa0804000:CDS 50.0%
ACAAGCAGAGATCAGGCTCA+AGG + chr5_3:19562250-19562269 Msa0804000:CDS 50.0%
GTTTGTAAATGCGGGAGGGG+AGG + chr5_3:19555701-19555720 Msa0804000:CDS 55.0%
CCACTATCGCCTCATTCGTG+CGG - chr5_3:19555794-19555813 None:intergenic 55.0%
TGATTGTCGGGCCACTGTGA+AGG + chr5_3:19556134-19556153 Msa0804000:CDS 55.0%
GGGCCACTGTGAAGGATGAT+GGG + chr5_3:19556142-19556161 Msa0804000:CDS 55.0%
GGCCACTGTGAAGGATGATG+GGG + chr5_3:19556143-19556162 Msa0804000:CDS 55.0%
CACCCCATCATCCTTCACAG+TGG - chr5_3:19556148-19556167 None:intergenic 55.0%
AGCTGGGTGTACAACGGTTG+TGG + chr5_3:19557469-19557488 Msa0804000:CDS 55.0%
!! TGGAGTGTGCAGGGGTATCA+AGG - chr5_3:19557968-19557987 None:intergenic 55.0%
GTGAAGGATGGAGTGTGCAG+GGG - chr5_3:19557976-19557995 None:intergenic 55.0%
TACCCCTGCCACAGCAAATG+TGG + chr5_3:19558051-19558070 Msa0804000:intron 55.0%
!! AGCCACATTTGCTGTGGCAG+GGG - chr5_3:19558056-19558075 None:intergenic 55.0%
!! GAGCCACATTTGCTGTGGCA+GGG - chr5_3:19558057-19558076 None:intergenic 55.0%
!! TGAGCCACATTTGCTGTGGC+AGG - chr5_3:19558058-19558077 None:intergenic 55.0%
! GTGTGGACTGTACTGCAAGC+TGG + chr5_3:19559658-19559677 Msa0804000:CDS 55.0%
CGTGCAAGGAGAGCGACTTA+AGG + chr5_3:19559966-19559985 Msa0804000:CDS 55.0%
GCAAGGAGAGCGACTTAAGG+AGG + chr5_3:19559969-19559988 Msa0804000:CDS 55.0%
TCACCGACATCCTGGTCTGA+TGG - chr5_3:19560367-19560386 None:intergenic 55.0%
TCAGAGTCTCACCGACATCC+TGG - chr5_3:19560375-19560394 None:intergenic 55.0%
!! AGAGTGAGGGGCGTTGAGTT+AGG + chr5_3:19560415-19560434 Msa0804000:CDS 55.0%
TCACGTGGCAACATGCGTCA+TGG + chr5_3:19561807-19561826 Msa0804000:intron 55.0%
GGAGGGGAGGCGACTAATGA+AGG + chr5_3:19555714-19555733 Msa0804000:CDS 60.0%
CCGCACGAATGAGGCGATAG+TGG + chr5_3:19555791-19555810 Msa0804000:CDS 60.0%
CGGGCCACTGTGAAGGATGA+TGG + chr5_3:19556141-19556160 Msa0804000:CDS 60.0%
!! GGCAGGGGTACTGCTACATC+AGG - chr5_3:19558041-19558060 None:intergenic 60.0%
AGGTGTGGCCGCCACCTTTA+CGG - chr5_3:19561906-19561925 None:intergenic 60.0%
GTGGCGGCCACACCTGATAT+AGG + chr5_3:19561911-19561930 Msa0804000:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 19555005 19562782 19555005 ID=Msa0804000;Name=Msa0804000
chr5_3 mRNA 19555005 19562782 19555005 ID=Msa0804000-mRNA-1;Parent=Msa0804000;Name=Msa0804000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=142|0.94|0.95|1|0.94|0.9|20|271|1055
chr5_3 exon 19555005 19555315 19555005 ID=Msa0804000-mRNA-1:exon:7986;Parent=Msa0804000-mRNA-1
chr5_3 exon 19555685 19555986 19555685 ID=Msa0804000-mRNA-1:exon:7987;Parent=Msa0804000-mRNA-1
chr5_3 exon 19556075 19556246 19556075 ID=Msa0804000-mRNA-1:exon:7988;Parent=Msa0804000-mRNA-1
chr5_3 exon 19556345 19556415 19556345 ID=Msa0804000-mRNA-1:exon:7989;Parent=Msa0804000-mRNA-1
chr5_3 exon 19556517 19556700 19556517 ID=Msa0804000-mRNA-1:exon:7990;Parent=Msa0804000-mRNA-1
chr5_3 exon 19556782 19556891 19556782 ID=Msa0804000-mRNA-1:exon:7991;Parent=Msa0804000-mRNA-1
chr5_3 exon 19556985 19557084 19556985 ID=Msa0804000-mRNA-1:exon:7992;Parent=Msa0804000-mRNA-1
chr5_3 exon 19557207 19557293 19557207 ID=Msa0804000-mRNA-1:exon:7993;Parent=Msa0804000-mRNA-1
chr5_3 exon 19557417 19557593 19557417 ID=Msa0804000-mRNA-1:exon:7994;Parent=Msa0804000-mRNA-1
chr5_3 exon 19559168 19559441 19559168 ID=Msa0804000-mRNA-1:exon:7995;Parent=Msa0804000-mRNA-1
chr5_3 exon 19559579 19559740 19559579 ID=Msa0804000-mRNA-1:exon:7996;Parent=Msa0804000-mRNA-1
chr5_3 exon 19559858 19560073 19559858 ID=Msa0804000-mRNA-1:exon:7997;Parent=Msa0804000-mRNA-1
chr5_3 exon 19560168 19560205 19560168 ID=Msa0804000-mRNA-1:exon:7998;Parent=Msa0804000-mRNA-1
chr5_3 exon 19560326 19560489 19560326 ID=Msa0804000-mRNA-1:exon:7999;Parent=Msa0804000-mRNA-1
chr5_3 exon 19560585 19560836 19560585 ID=Msa0804000-mRNA-1:exon:8000;Parent=Msa0804000-mRNA-1
chr5_3 exon 19561097 19561162 19561097 ID=Msa0804000-mRNA-1:exon:8001;Parent=Msa0804000-mRNA-1
chr5_3 exon 19561354 19561428 19561354 ID=Msa0804000-mRNA-1:exon:8002;Parent=Msa0804000-mRNA-1
chr5_3 exon 19561532 19561597 19561532 ID=Msa0804000-mRNA-1:exon:8003;Parent=Msa0804000-mRNA-1
chr5_3 exon 19561833 19562567 19561833 ID=Msa0804000-mRNA-1:exon:8004;Parent=Msa0804000-mRNA-1
chr5_3 exon 19562764 19562782 19562764 ID=Msa0804000-mRNA-1:exon:8005;Parent=Msa0804000-mRNA-1
chr5_3 five_prime_UTR 19555005 19555146 19555005 ID=Msa0804000-mRNA-1:five_prime_utr;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19555147 19555315 19555147 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19555685 19555986 19555685 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19556075 19556246 19556075 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19556345 19556415 19556345 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19556517 19556700 19556517 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19556782 19556891 19556782 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19556985 19557084 19556985 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19557207 19557293 19557207 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19557417 19557593 19557417 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19559168 19559441 19559168 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19559579 19559740 19559579 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19559858 19560073 19559858 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19560168 19560205 19560168 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19560326 19560489 19560326 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19560585 19560836 19560585 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19561097 19561162 19561097 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19561354 19561428 19561354 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19561532 19561597 19561532 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 CDS 19561833 19562315 19561833 ID=Msa0804000-mRNA-1:cds;Parent=Msa0804000-mRNA-1
chr5_3 three_prime_UTR 19562316 19562567 19562316 ID=Msa0804000-mRNA-1:three_prime_utr;Parent=Msa0804000-mRNA-1
chr5_3 three_prime_UTR 19562764 19562782 19562764 ID=Msa0804000-mRNA-1:three_prime_utr;Parent=Msa0804000-mRNA-1
Gene Sequence

>Msa0804000

ATGGAACCGATTCAATCCAACGAATTTCACAATGACCCTCAAACCCTAATCCCAAACCAACAAGAAGATTCAGTAATGGAAGATGCAAACGATTCCTTGTTCGATTCTATGCTTGTTGATTCAAGTTCAAAACTCATTCAAAATGGCTTCACCAGATCTCAAAATTCAGCAGAGGAGTGTGTAATGTTTGTAAATGCGGGAGGGGAGGCGACTAATGAAGGAGCTGATGGAGTGAATTTTCTGAGTGACACTTTTTTTGACGGTGGCAATGTTTTCCGCACGAATGAGGCGATAGTGGAAGGTGGAGATTACCCGTCGATTTATCAGTCAGCTCGGGTGGGAAGTTTTAGTTATAGAATTGACAACCTTCCTCCTGGACAATATTTTGTTGACCTGCATTTTGTTGAGATTATTAATGTAAATGGGCCGAAAGGAATGAGGGTGTTCAATGTTTACATACAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCAGCTGTTGGAGTCAACAAGCCACTACAGCTGATTGATTGTCGGGCCACTGTGAAGGATGATGGGGTGATTCTCATAAGATTTGAGAGTTTAAATGGAAGCCCAGTTGTTAGTGGGATCTGCATTAGGAGAGCGACAAAAGAGTCAGTTCCACCAGTGCCAAGCGATTTCATTGAATGTAACTACTGTGCTGCGCAGATTGAAATTCCTTCATCACAGATAAAAGTTATGCAAACAAAATCTACAGCAAAGTATGAAAATAAGATAAAGGAGCTTACTATGCAGTGCGAGCTCAAAGCAAAAGAATGCTATGAGGCGTGGACGTCATTAACTGAAATGAGTAGGAAAATGGAAAAAGTCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACAGAACAAACTGCCGAGAAACAAGCTGAGAACCTGAGGAGTATTTCTAATAGATATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATCAGTTTACAGGAAAAAGTAAAGTTGATGAAGAGTGAGCAGTCTCGGCTTTCCTTTGAAGCACATGAATGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTATGCAGTACAGGAGTTGGTTAAGCAGTGTGAAGATCTTAAAGTGAAGTATTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATCAGAGTTTTTTGCCGTTGTCGTCCATTGAATAAGGTTGAAATGTCAGCTGGGTGTACAACGGTTGTGGATTTTGATGCAGCAAAAGATGGATGCCTTGGAATTTTGGCAACTGGCTCCTCTAAAAAATCATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTATGGACAAACAGGAACAGGAAAAACATTTACTATGGAAGGAACAGAGCAGAATAGAGGTGTAAATTACAGGACTCTTGAGCATTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGTGTGCTCGAGGTTTACAATGAACAAATCAGAGACCTATTGGCTACGGGACCAACATCAAAAAGGTTGGAGATAAAACAAAATTATGAAGGACATCATCATGTACCTGGTGTTGTAGAAGCCAAGGTTGACAACATAAGTGACGTGTGGACTGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAACAACGTTAATGAACATAGTAGTCGATCTCATTGCATGCTATGTATAATGGTAAAGACTAAAAATTTGATGAATGGTGAGTGTACCAAGAGCAAACTTTGGCTTGTGGATTTGGCAGGCAGTGAGAGACTTGCAAAGACTGACGTGCAAGGAGAGCGACTTAAGGAGGCACAGAATATTAACCGATCTCTTTCTGCTCTTGGAGATGTGATATCCGCTTTAGCTGCAAAAAGTAGTCACATTCCTTATAGGAATTCTAAATTGACACATTTACTCCAAGACTCACTAGGAGGTGACTCAAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGATGTCGGTGAGACTCTGAGCTCACTTAACTTTGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAGGCGAACTTCAAAAGACAAAAGCAATGCTTGACAAAGCACGAAGTGAGTGCAGAAGTAAAGAAGAATCCTTGAGGAAATTAGAAGAAAGCTTGCAAAACATTGAGAGTAAGGCCAAGGGAAAGGATAATATCCACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCATGCAAAACCAATCAGAGAAACAAGTTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTTCAACATAAGGTCAAAGAGCTAGAGAGAAAAATAAAAGAACAACTGCAGACAGAGACAGCAAATTTCCAACAGAAGGTTTGGGATCTAGAAAAGAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTTCTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCGGAATCCTTGCTAAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGCAGCAAACTCACTGTTATGTTGAAGCCGTAAAGGTGGCGGCCACACCTGATATAGGTAAAAGCCGCACAAGTGATGAATCTCCAAATGATATTGAGAGTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAGATAAGTCAAGGTTCTGCTTTGTTAAAAGGGACTGATTCTACTCAGCAGATGAGAAACAAAAGGCAGTTAAGAAGCAATGACATTGAGAACAATTTAGTCGGGCCACCGTCATCCACTTTACGTGATAGAAAAATGACAAGGAAATCTGATCCGCCTAAAATTGTAAGAACTGGTAGGCTAACAACAAAACCGCCGGTCATTACTAGTCAAGTTCCTTTATCTCATAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGATAGTAAGAAAAAGATATGGTCAAGATAG
Protein sequence

>Msa0804000

MEPIQSNEFHNDPQTLIPNQQEDSVMEDANDSLFDSMLVDSSSKLIQNGFTRSQNSAEECVMFVNAGGEATNEGADGVNFLSDTFFDGGNVFRTNEAIVEGGDYPSIYQSARVGSFSYRIDNLPPGQYFVDLHFVEIINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESLNGSPVVSGICIRRATKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKELTMQCELKAKECYEAWTSLTEMSRKMEKVQMELDQVTFKSLTTEQTAEKQAENLRSISNRYELDKKKWAEAIISLQEKVKLMKSEQSRLSFEAHECVDSIPELNKMVYAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGILATGSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTGELQKTKAMLDKARSECRSKEESLRKLEESLQNIESKAKGKDNIHKNLQEKIKELEGQIELKTSMQNQSEKQVSQLCEKLKGKEETCCTLQHKVKELERKIKEQLQTETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWQQTHCYVEAVKVAATPDIGKSRTSDESPNDIESRILCSSNSVNRQISQGSALLKGTDSTQQMRNKRQLRSNDIENNLVGPPSSTLRDRKMTRKSDPPKIVRTGRLTTKPPVITSQVPLSHKRASTSRDQAQGVKERDSKKKIWSR*