Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436330 | XP_013447173.1 | 97.065 | 477 | 11 | 2 | 1 | 475 | 1 | 476 | 0.0 | 905 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436330 | sp|Q9T012|HMG13_ARATH | 57.609 | 460 | 162 | 7 | 10 | 464 | 11 | 442 | 3.27e-162 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436330 | A0A072U5S8 | 97.065 | 477 | 11 | 2 | 1 | 475 | 1 | 476 | 0.0 | 905 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0436330 | TR | HMG |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0436330 | 0.825961 | 3.523681e-54 | -8.615850e-47 |
| Msa0016040 | Msa0436330 | 0.826916 | 2.086172e-54 | -8.615850e-47 |
| Msa0022260 | Msa0436330 | 0.820583 | 6.351477e-53 | -8.615850e-47 |
| Msa0027280 | Msa0436330 | 0.809877 | 1.522468e-50 | -8.615850e-47 |
| Msa0032980 | Msa0436330 | 0.827285 | 1.702242e-54 | -8.615850e-47 |
| Msa0038940 | Msa0436330 | 0.829937 | 3.891578e-55 | -8.615850e-47 |
| Msa0041850 | Msa0436330 | 0.802011 | 6.869636e-49 | -8.615850e-47 |
| Msa0042640 | Msa0436330 | 0.800776 | 1.229543e-48 | -8.615850e-47 |
| Msa0048510 | Msa0436330 | 0.855156 | 7.623544e-62 | -8.615850e-47 |
| Msa0049760 | Msa0436330 | 0.806234 | 9.081757e-50 | -8.615850e-47 |
| Msa0053070 | Msa0436330 | 0.804873 | 1.753016e-49 | -8.615850e-47 |
| Msa0054690 | Msa0436330 | 0.834124 | 3.593170e-56 | -8.615850e-47 |
| Msa0056180 | Msa0436330 | 0.810891 | 9.201540e-51 | -8.615850e-47 |
| Msa0062340 | Msa0436330 | 0.853029 | 3.129843e-61 | -8.615850e-47 |
| Msa0065020 | Msa0436330 | 0.835885 | 1.293329e-56 | -8.615850e-47 |
| Msa0067330 | Msa0436330 | 0.813154 | 2.954932e-51 | -8.615850e-47 |
| Msa0068150 | Msa0436330 | 0.808608 | 2.848122e-50 | -8.615850e-47 |
| Msa0074360 | Msa0436330 | 0.842260 | 2.881973e-58 | -8.615850e-47 |
| Msa0075530 | Msa0436330 | 0.810089 | 1.370630e-50 | -8.615850e-47 |
| Msa0077340 | Msa0436330 | 0.844586 | 6.899006e-59 | -8.615850e-47 |
| Msa0077560 | Msa0436330 | 0.883595 | 3.928608e-71 | -8.615850e-47 |
| Msa0081980 | Msa0436330 | 0.808029 | 3.784972e-50 | -8.615850e-47 |
| Msa0082020 | Msa0436330 | 0.800736 | 1.252883e-48 | -8.615850e-47 |
| Msa0089460 | Msa0436330 | 0.800528 | 1.381524e-48 | -8.615850e-47 |
| Msa0091350 | Msa0436330 | 0.802569 | 5.272580e-49 | -8.615850e-47 |
| Msa0094780 | Msa0436330 | 0.849141 | 3.911869e-60 | -8.615850e-47 |
| Msa0094790 | Msa0436330 | 0.809839 | 1.551640e-50 | -8.615850e-47 |
| Msa0110200 | Msa0436330 | 0.811960 | 5.389994e-51 | -8.615850e-47 |
| Msa0122330 | Msa0436330 | 0.870957 | 9.854771e-67 | -8.615850e-47 |
| Msa0123070 | Msa0436330 | 0.865715 | 4.829997e-65 | -8.615850e-47 |
| Msa0124910 | Msa0436330 | 0.813533 | 2.439612e-51 | -8.615850e-47 |
| Msa0125360 | Msa0436330 | 0.856378 | 3.349387e-62 | -8.615850e-47 |
| Msa0127680 | Msa0436330 | 0.808156 | 3.556221e-50 | -8.615850e-47 |
| Msa0128310 | Msa0436330 | 0.800484 | 1.410699e-48 | -8.615850e-47 |
| Msa0140280 | Msa0436330 | 0.802907 | 4.489575e-49 | -8.615850e-47 |
| Msa0140380 | Msa0436330 | 0.815732 | 7.949587e-52 | -8.615850e-47 |
| Msa0142430 | Msa0436330 | 0.823874 | 1.094920e-53 | -8.615850e-47 |
| Msa0159590 | Msa0436330 | 0.827346 | 1.645945e-54 | -8.615850e-47 |
| Msa0159620 | Msa0436330 | 0.818144 | 2.285331e-52 | -8.615850e-47 |
| Msa0165830 | Msa0436330 | 0.804891 | 1.737809e-49 | -8.615850e-47 |
| Msa0168050 | Msa0436330 | 0.806694 | 7.263966e-50 | -8.615850e-47 |
| Msa0174290 | Msa0436330 | 0.800100 | 1.688253e-48 | -8.615850e-47 |
| Msa0181650 | Msa0436330 | 0.847984 | 8.180486e-60 | -8.615850e-47 |
| Msa0190570 | Msa0436330 | 0.859462 | 4.069037e-63 | -8.615850e-47 |
| Msa0190730 | Msa0436330 | 0.893721 | 4.826322e-75 | -8.615850e-47 |
| Msa0194630 | Msa0436330 | 0.816801 | 4.586495e-52 | -8.615850e-47 |
| Msa0200050 | Msa0436330 | 0.827642 | 1.397651e-54 | -8.615850e-47 |
| Msa0204950 | Msa0436330 | 0.802566 | 5.278924e-49 | -8.615850e-47 |
| Msa0213030 | Msa0436330 | 0.832827 | 7.569952e-56 | -8.615850e-47 |
| Msa0225860 | Msa0436330 | 0.815576 | 8.611871e-52 | -8.615850e-47 |
| Msa0232760 | Msa0436330 | 0.817407 | 3.350571e-52 | -8.615850e-47 |
| Msa0233020 | Msa0436330 | 0.863648 | 2.142671e-64 | -8.615850e-47 |
| Msa0367150 | Msa0436330 | 0.814480 | 1.508384e-51 | -8.615850e-47 |
| Msa0367520 | Msa0436330 | 0.844106 | 9.285485e-59 | -8.615850e-47 |
| Msa0368860 | Msa0436330 | 0.836472 | 9.173888e-57 | -8.615850e-47 |
| Msa0369790 | Msa0436330 | 0.832845 | 7.489751e-56 | -8.615850e-47 |
| Msa0373500 | Msa0436330 | 0.868566 | 5.936807e-66 | -8.615850e-47 |
| Msa0373590 | Msa0436330 | 0.831521 | 1.592879e-55 | -8.615850e-47 |
| Msa0377710 | Msa0436330 | 0.861991 | 6.949835e-64 | -8.615850e-47 |
| Msa0380490 | Msa0436330 | 0.851519 | 8.419248e-61 | -8.615850e-47 |
| Msa0383000 | Msa0436330 | 0.833235 | 5.991826e-56 | -8.615850e-47 |
| Msa0404130 | Msa0436330 | 0.816355 | 5.771676e-52 | -8.615850e-47 |
| Msa0405620 | Msa0436330 | 0.803536 | 3.326851e-49 | -8.615850e-47 |
| Msa0409830 | Msa0436330 | 0.865700 | 4.882467e-65 | -8.615850e-47 |
| Msa0421130 | Msa0436330 | 0.807462 | 4.996512e-50 | -8.615850e-47 |
| Msa0422050 | Msa0436330 | 0.824711 | 6.959690e-54 | -8.615850e-47 |
| Msa0430000 | Msa0436330 | 0.835490 | 1.628062e-56 | -8.615850e-47 |
| Msa0430300 | Msa0436330 | 0.805697 | 1.178071e-49 | -8.615850e-47 |
| Msa0430600 | Msa0436330 | 0.800621 | 1.322373e-48 | -8.615850e-47 |
| Msa0432010 | Msa0436330 | 0.864020 | 1.642071e-64 | -8.615850e-47 |
| Msa0433150 | Msa0436330 | 0.825790 | 3.867827e-54 | -8.615850e-47 |
| Msa0436330 | Msa0454560 | 0.832140 | 1.120309e-55 | -8.615850e-47 |
| Msa0436330 | Msa0459740 | 0.827371 | 1.623836e-54 | -8.615850e-47 |
| Msa0436330 | Msa0462780 | 0.846653 | 1.897371e-59 | -8.615850e-47 |
| Msa0436330 | Msa0464000 | 0.832669 | 8.283976e-56 | -8.615850e-47 |
| Msa0436330 | Msa0466880 | 0.812644 | 3.820961e-51 | -8.615850e-47 |
| Msa0436330 | Msa0468620 | 0.838700 | 2.460814e-57 | -8.615850e-47 |
| Msa0436330 | Msa0468700 | 0.858854 | 6.189699e-63 | -8.615850e-47 |
| Msa0436330 | Msa0481890 | 0.892271 | 1.851471e-74 | -8.615850e-47 |
| Msa0436330 | Msa0483100 | 0.823084 | 1.675587e-53 | -8.615850e-47 |
| Msa0436330 | Msa0500570 | 0.835430 | 1.685339e-56 | -8.615850e-47 |
| Msa0436330 | Msa0500650 | 0.836413 | 9.498491e-57 | -8.615850e-47 |
| Msa0436330 | Msa0502510 | 0.845533 | 3.828202e-59 | -8.615850e-47 |
| Msa0436330 | Msa0506950 | 0.803824 | 2.899215e-49 | -8.615850e-47 |
| Msa0436330 | Msa0509550 | 0.833010 | 6.818541e-56 | -8.615850e-47 |
| Msa0436330 | Msa0514500 | 0.840524 | 8.253781e-58 | -8.615850e-47 |
| Msa0436330 | Msa0514580 | 0.866593 | 2.546302e-65 | -8.615850e-47 |
| Msa0436330 | Msa0519760 | 0.820614 | 6.250365e-53 | -8.615850e-47 |
| Msa0436330 | Msa0519810 | 0.810418 | 1.164036e-50 | -8.615850e-47 |
| Msa0436330 | Msa0519840 | 0.815733 | 7.945305e-52 | -8.615850e-47 |
| Msa0436330 | Msa0520870 | 0.826903 | 2.100756e-54 | -8.615850e-47 |
| Msa0436330 | Msa0521680 | 0.816688 | 4.861234e-52 | -8.615850e-47 |
| Msa0436330 | Msa0528570 | 0.811941 | 5.441841e-51 | -8.615850e-47 |
| Msa0436330 | Msa0529030 | 0.838075 | 3.567188e-57 | -8.615850e-47 |
| Msa0436330 | Msa0531960 | 0.847360 | 1.214762e-59 | -8.615850e-47 |
| Msa0436330 | Msa0534720 | 0.820456 | 6.794673e-53 | -8.615850e-47 |
| Msa0436330 | Msa0545920 | 0.801712 | 7.911658e-49 | -8.615850e-47 |
| Msa0436330 | Msa0550590 | 0.808591 | 2.873279e-50 | -8.615850e-47 |
| Msa0436330 | Msa0553750 | 0.814014 | 1.911368e-51 | -8.615850e-47 |
| Msa0436330 | Msa0556440 | 0.812569 | 3.968204e-51 | -8.615850e-47 |
| Msa0436330 | Msa0567170 | 0.868415 | 6.642857e-66 | -8.615850e-47 |
| Msa0436330 | Msa0580370 | 0.849074 | 4.082585e-60 | -8.615850e-47 |
| Msa0436330 | Msa0580810 | 0.802528 | 5.376450e-49 | -8.615850e-47 |
| Msa0436330 | Msa0581840 | 0.817408 | 3.349174e-52 | -8.615850e-47 |
| Msa0436330 | Msa0588920 | 0.853695 | 2.015745e-61 | -8.615850e-47 |
| Msa0436330 | Msa0590200 | 0.831563 | 1.554836e-55 | -8.615850e-47 |
| Msa0436330 | Msa0593400 | 0.818033 | 2.420439e-52 | -8.615850e-47 |
| Msa0436330 | Msa0601720 | 0.808265 | 3.371867e-50 | -8.615850e-47 |
| Msa0436330 | Msa0606100 | 0.801390 | 9.209704e-49 | -8.615850e-47 |
| Msa0436330 | Msa0607800 | 0.868446 | 6.490531e-66 | -8.615850e-47 |
| Msa0436330 | Msa0613580 | 0.801931 | 7.133056e-49 | -8.615850e-47 |
| Msa0436330 | Msa0615630 | 0.822621 | 2.147778e-53 | -8.615850e-47 |
| Msa0436330 | Msa0620500 | 0.809200 | 2.127985e-50 | -8.615850e-47 |
| Msa0436330 | Msa0621710 | 0.858233 | 9.479647e-63 | -8.615850e-47 |
| Msa0436330 | Msa0624900 | 0.843532 | 1.322289e-58 | -8.615850e-47 |
| Msa0436330 | Msa0641990 | 0.834356 | 3.143130e-56 | -8.615850e-47 |
| Msa0436330 | Msa0647050 | 0.805894 | 1.070860e-49 | -8.615850e-47 |
| Msa0436330 | Msa0648040 | 0.857582 | 1.479569e-62 | -8.615850e-47 |
| Msa0436330 | Msa0652000 | 0.850325 | 1.826407e-60 | -8.615850e-47 |
| Msa0436330 | Msa0652770 | 0.806769 | 7.002505e-50 | -8.615850e-47 |
| Msa0436330 | Msa0657700 | 0.821267 | 4.421515e-53 | -8.615850e-47 |
| Msa0436330 | Msa0658640 | 0.869256 | 3.547786e-66 | -8.615850e-47 |
| Msa0436330 | Msa0660370 | 0.825365 | 4.876848e-54 | -8.615850e-47 |
| Msa0436330 | Msa0661150 | 0.824945 | 6.129248e-54 | -8.615850e-47 |
| Msa0436330 | Msa0666700 | 0.849020 | 4.228127e-60 | -8.615850e-47 |
| Msa0436330 | Msa0668900 | 0.807048 | 6.113651e-50 | -8.615850e-47 |
| Msa0436330 | Msa0681050 | 0.808897 | 2.470635e-50 | -8.615850e-47 |
| Msa0436330 | Msa0690740 | 0.843902 | 1.052784e-58 | -8.615850e-47 |
| Msa0436330 | Msa0694500 | 0.828441 | 8.976430e-55 | -8.615850e-47 |
| Msa0436330 | Msa0698730 | 0.817784 | 2.755729e-52 | -8.615850e-47 |
| Msa0436330 | Msa0702810 | 0.823497 | 1.342005e-53 | -8.615850e-47 |
| Msa0436330 | Msa0703600 | 0.880921 | 3.684948e-70 | -8.615850e-47 |
| Msa0436330 | Msa0709200 | 0.881958 | 1.556589e-70 | -8.615850e-47 |
| Msa0436330 | Msa0709440 | 0.892562 | 1.416365e-74 | -8.615850e-47 |
| Msa0436330 | Msa0709630 | 0.815476 | 9.068017e-52 | -8.615850e-47 |
| Msa0436330 | Msa0714520 | 0.837474 | 5.089482e-57 | -8.615850e-47 |
| Msa0436330 | Msa0714790 | 0.852732 | 3.805844e-61 | -8.615850e-47 |
| Msa0436330 | Msa0716480 | 0.828479 | 8.787176e-55 | -8.615850e-47 |
| Msa0436330 | Msa0716890 | 0.856466 | 3.157316e-62 | -8.615850e-47 |
| Msa0436330 | Msa0717830 | 0.824818 | 6.568058e-54 | -8.615850e-47 |
| Msa0436330 | Msa0717900 | 0.814690 | 1.355171e-51 | -8.615850e-47 |
| Msa0436330 | Msa0721080 | 0.813049 | 3.115200e-51 | -8.615850e-47 |
| Msa0436330 | Msa0722220 | 0.819221 | 1.301283e-52 | -8.615850e-47 |
| Msa0436330 | Msa0730930 | 0.862671 | 4.295690e-64 | -8.615850e-47 |
| Msa0436330 | Msa0734250 | 0.813424 | 2.577863e-51 | -8.615850e-47 |
| Msa0436330 | Msa0735780 | 0.880321 | 6.043958e-70 | -8.615850e-47 |
| Msa0436330 | Msa0738700 | 0.821822 | 3.290949e-53 | -8.615850e-47 |
| Msa0436330 | Msa0740710 | 0.853200 | 2.796217e-61 | -8.615850e-47 |
| Msa0436330 | Msa0743440 | 0.847645 | 1.014347e-59 | -8.615850e-47 |
| Msa0436330 | Msa0745720 | 0.828218 | 1.015599e-54 | -8.615850e-47 |
| Msa0436330 | Msa0754430 | 0.837566 | 4.819584e-57 | -8.615850e-47 |
| Msa0436330 | Msa0754450 | 0.844024 | 9.767004e-59 | -8.615850e-47 |
| Msa0436330 | Msa0755760 | 0.806916 | 6.521200e-50 | -8.615850e-47 |
| Msa0436330 | Msa0756820 | 0.829688 | 4.474593e-55 | -8.615850e-47 |
| Msa0436330 | Msa0758590 | 0.813681 | 2.262696e-51 | -8.615850e-47 |
| Msa0436330 | Msa0758650 | 0.805965 | 1.034673e-49 | -8.615850e-47 |
| Msa0436330 | Msa0773630 | 0.853953 | 1.698637e-61 | -8.615850e-47 |
| Msa0436330 | Msa0777750 | 0.831131 | 1.986442e-55 | -8.615850e-47 |
| Msa0436330 | Msa0780910 | 0.883772 | 3.380028e-71 | -8.615850e-47 |
| Msa0436330 | Msa0783930 | 0.810443 | 1.149839e-50 | -8.615850e-47 |
| Msa0436330 | Msa0787590 | 0.839361 | 1.659196e-57 | -8.615850e-47 |
| Msa0436330 | Msa0795870 | 0.850571 | 1.557611e-60 | -8.615850e-47 |
| Msa0436330 | Msa0804000 | 0.875298 | 3.439739e-68 | -8.615850e-47 |
| Msa0436330 | Msa0805680 | 0.829371 | 5.343118e-55 | -8.615850e-47 |
| Msa0436330 | Msa0811020 | 0.828198 | 1.027341e-54 | -8.615850e-47 |
| Msa0436330 | Msa0815970 | 0.825844 | 3.756229e-54 | -8.615850e-47 |
| Msa0436330 | Msa0818880 | 0.829711 | 4.417848e-55 | -8.615850e-47 |
| Msa0436330 | Msa0819170 | 0.822938 | 1.812388e-53 | -8.615850e-47 |
| Msa0436330 | Msa0821160 | 0.855517 | 5.981587e-62 | -8.615850e-47 |
| Msa0436330 | Msa0824450 | 0.877807 | 4.670317e-69 | -8.615850e-47 |
| Msa0436330 | Msa0828970 | 0.833383 | 5.503316e-56 | -8.615850e-47 |
| Msa0436330 | Msa0833650 | 0.853627 | 2.108524e-61 | -8.615850e-47 |
| Msa0436330 | Msa0836150 | 0.810859 | 9.345930e-51 | -8.615850e-47 |
| Msa0436330 | Msa0837460 | 0.835830 | 1.335179e-56 | -8.615850e-47 |
| Msa0436330 | Msa0837710 | 0.819113 | 1.376939e-52 | -8.615850e-47 |
| Msa0436330 | Msa0842070 | 0.888068 | 8.195069e-73 | -8.615850e-47 |
| Msa0436330 | Msa0843050 | 0.808970 | 2.383774e-50 | -8.615850e-47 |
| Msa0436330 | Msa0850690 | 0.814237 | 1.706696e-51 | -8.615850e-47 |
| Msa0436330 | Msa0851300 | 0.845821 | 3.197661e-59 | -8.615850e-47 |
| Msa0436330 | Msa0855230 | 0.849906 | 2.393594e-60 | -8.615850e-47 |
| Msa0436330 | Msa0859290 | 0.816245 | 6.107195e-52 | -8.615850e-47 |
| Msa0436330 | Msa0863620 | 0.829986 | 3.786425e-55 | -8.615850e-47 |
| Msa0436330 | Msa0867110 | 0.829797 | 4.210424e-55 | -8.615850e-47 |
| Msa0436330 | Msa0878280 | 0.821656 | 3.595579e-53 | -8.615850e-47 |
| Msa0436330 | Msa0879920 | 0.815484 | 9.028553e-52 | -8.615850e-47 |
| Msa0436330 | Msa0880270 | 0.818212 | 2.205852e-52 | -8.615850e-47 |
| Msa0436330 | Msa0888790 | 0.814140 | 1.792432e-51 | -8.615850e-47 |
| Msa0436330 | Msa0909760 | 0.807157 | 5.798360e-50 | -8.615850e-47 |
| Msa0436330 | Msa0915520 | 0.803329 | 3.672046e-49 | -8.615850e-47 |
| Msa0436330 | Msa0931590 | 0.848109 | 7.555452e-60 | -8.615850e-47 |
| Msa0436330 | Msa0944010 | 0.803804 | 2.926821e-49 | -8.615850e-47 |
| Msa0436330 | Msa0945190 | 0.803258 | 3.798338e-49 | -8.615850e-47 |
| Msa0436330 | Msa0966480 | 0.810965 | 8.865198e-51 | -8.615850e-47 |
| Msa0436330 | Msa0980290 | 0.839390 | 1.630871e-57 | -8.615850e-47 |
| Msa0436330 | Msa0982650 | 0.813480 | 2.505490e-51 | -8.615850e-47 |
| Msa0436330 | Msa0989370 | 0.806580 | 7.677542e-50 | -8.615850e-47 |
| Msa0436330 | Msa0997920 | 0.838528 | 2.725396e-57 | -8.615850e-47 |
| Msa0436330 | Msa1002640 | 0.804929 | 1.705748e-49 | -8.615850e-47 |
| Msa0436330 | Msa1033920 | 0.819324 | 1.233174e-52 | -8.615850e-47 |
| Msa0436330 | Msa1035570 | 0.836071 | 1.159758e-56 | -8.615850e-47 |
| Msa0436330 | Msa1035610 | 0.846013 | 2.834785e-59 | -8.615850e-47 |
| Msa0436330 | Msa1035650 | 0.808815 | 2.573145e-50 | -8.615850e-47 |
| Msa0436330 | Msa1037540 | 0.833372 | 5.537599e-56 | -8.615850e-47 |
| Msa0436330 | Msa1042160 | 0.819321 | 1.235117e-52 | -8.615850e-47 |
| Msa0436330 | Msa1042190 | 0.825337 | 4.953087e-54 | -8.615850e-47 |
| Msa0436330 | Msa1042880 | 0.832708 | 8.101291e-56 | -8.615850e-47 |
| Msa0436330 | Msa1056830 | 0.819926 | 8.985779e-53 | -8.615850e-47 |
| Msa0436330 | Msa1059020 | 0.811199 | 7.890404e-51 | -8.615850e-47 |
| Msa0436330 | Msa1072940 | 0.841097 | 5.842831e-58 | -8.615850e-47 |
| Msa0436330 | Msa1074900 | 0.829964 | 3.834088e-55 | -8.615850e-47 |
| Msa0436330 | Msa1078880 | 0.804574 | 2.023920e-49 | -8.615850e-47 |
| Msa0436330 | Msa1080000 | 0.814697 | 1.349879e-51 | -8.615850e-47 |
| Msa0436330 | Msa1081390 | 0.838480 | 2.804213e-57 | -8.615850e-47 |
| Msa0436330 | Msa1084530 | 0.882322 | 1.147613e-70 | -8.615850e-47 |
| Msa0436330 | Msa1092420 | 0.817350 | 3.452007e-52 | -8.615850e-47 |
| Msa0436330 | Msa1104110 | 0.809022 | 2.323639e-50 | -8.615850e-47 |
| Msa0436330 | Msa1116190 | 0.810274 | 1.250263e-50 | -8.615850e-47 |
| Msa0436330 | Msa1116220 | 0.827559 | 1.463437e-54 | -8.615850e-47 |
| Msa0436330 | Msa1116660 | 0.800760 | 1.238914e-48 | -8.615850e-47 |
| Msa0436330 | Msa1123210 | 0.805176 | 1.514432e-49 | -8.615850e-47 |
| Msa0436330 | Msa1125820 | 0.887113 | 1.897986e-72 | -8.615850e-47 |
| Msa0436330 | Msa1125990 | 0.887370 | 1.515111e-72 | -8.615850e-47 |
| Msa0436330 | Msa1127280 | 0.804232 | 2.384787e-49 | -8.615850e-47 |
| Msa0436330 | Msa1127470 | 0.835600 | 1.526665e-56 | -8.615850e-47 |
| Msa0436330 | Msa1130420 | 0.826894 | 2.111312e-54 | -8.615850e-47 |
| Msa0436330 | Msa1132530 | 0.868270 | 7.398959e-66 | -8.615850e-47 |
| Msa0436330 | Msa1132840 | 0.848916 | 4.516110e-60 | -8.615850e-47 |
| Msa0436330 | Msa1147910 | 0.811967 | 5.371346e-51 | -8.615850e-47 |
| Msa0436330 | Msa1154100 | 0.804516 | 2.080284e-49 | -8.615850e-47 |
| Msa0436330 | Msa1160920 | 0.840082 | 1.077378e-57 | -8.615850e-47 |
| Msa0436330 | Msa1162180 | 0.801117 | 1.047382e-48 | -8.615850e-47 |
| Msa0436330 | Msa1162230 | 0.828754 | 7.540801e-55 | -8.615850e-47 |
| Msa0436330 | Msa1167470 | 0.832282 | 1.033384e-55 | -8.615850e-47 |
| Msa0436330 | Msa1171070 | 0.813934 | 1.990606e-51 | -8.615850e-47 |
| Msa0436330 | Msa1171290 | 0.892103 | 2.159913e-74 | -8.615850e-47 |
| Msa0436330 | Msa1190390 | 0.810578 | 1.074935e-50 | -8.615850e-47 |
| Msa0436330 | Msa1192560 | 0.800283 | 1.549792e-48 | -8.615850e-47 |
| Msa0436330 | Msa1192570 | 0.856422 | 3.251210e-62 | -8.615850e-47 |
| Msa0436330 | Msa1200890 | 0.847655 | 1.008026e-59 | -8.615850e-47 |
| Msa0436330 | Msa1201540 | 0.827839 | 1.253222e-54 | -8.615850e-47 |
| Msa0436330 | Msa1201780 | 0.825512 | 4.502679e-54 | -8.615850e-47 |
| Msa0436330 | Msa1208950 | 0.820520 | 6.567044e-53 | -8.615850e-47 |
| Msa0436330 | Msa1211640 | 0.801907 | 7.213967e-49 | -8.615850e-47 |
| Msa0436330 | Msa1213830 | 0.803478 | 3.420828e-49 | -8.615850e-47 |
| Msa0436330 | Msa1214350 | 0.843644 | 1.234193e-58 | -8.615850e-47 |
| Msa0436330 | Msa1215870 | 0.840102 | 1.064507e-57 | -8.615850e-47 |
| Msa0436330 | Msa1215980 | 0.807978 | 3.881381e-50 | -8.615850e-47 |
| Msa0436330 | Msa1217210 | 0.809193 | 2.135514e-50 | -8.615850e-47 |
| Msa0436330 | Msa1218820 | 0.872790 | 2.425488e-67 | -8.615850e-47 |
| Msa0436330 | Msa1226520 | 0.867725 | 1.107703e-65 | -8.615850e-47 |
| Msa0436330 | Msa1240260 | 0.803454 | 3.459503e-49 | -8.615850e-47 |
| Msa0436330 | Msa1244240 | 0.824056 | 9.923596e-54 | -8.615850e-47 |
| Msa0436330 | Msa1254240 | 0.845151 | 4.857368e-59 | -8.615850e-47 |
| Msa0436330 | Msa1254540 | 0.860006 | 2.789455e-63 | -8.615850e-47 |
| Msa0436330 | Msa1263740 | 0.838452 | 2.851423e-57 | -8.615850e-47 |
| Msa0436330 | Msa1263780 | 0.855217 | 7.318172e-62 | -8.615850e-47 |
| Msa0436330 | Msa1263900 | 0.827404 | 1.593854e-54 | -8.615850e-47 |
| Msa0436330 | Msa1268630 | 0.811036 | 8.556484e-51 | -8.615850e-47 |
| Msa0436330 | Msa1294460 | 0.838501 | 2.770475e-57 | -8.615850e-47 |
| Msa0436330 | Msa1301700 | 0.809307 | 2.018504e-50 | -8.615850e-47 |
| Msa0436330 | Msa1305780 | 0.819464 | 1.145445e-52 | -8.615850e-47 |
| Msa0436330 | Msa1306570 | 0.842810 | 2.059454e-58 | -8.615850e-47 |
| Msa0436330 | Msa1306640 | 0.817250 | 3.634211e-52 | -8.615850e-47 |
| Msa0436330 | Msa1307090 | 0.827953 | 1.176354e-54 | -8.615850e-47 |
| Msa0436330 | Msa1307630 | 0.832120 | 1.133104e-55 | -8.615850e-47 |
| Msa0436330 | Msa1309090 | 0.815110 | 1.093658e-51 | -8.615850e-47 |
| Msa0436330 | Msa1320670 | 0.814424 | 1.551463e-51 | -8.615850e-47 |
| Msa0436330 | Msa1332950 | 0.824430 | 8.108472e-54 | -8.615850e-47 |
| Msa0436330 | Msa1338210 | 0.805375 | 1.376045e-49 | -8.615850e-47 |
| Msa0436330 | Msa1339170 | 0.824091 | 9.738474e-54 | -8.615850e-47 |
| Msa0436330 | Msa1343170 | 0.817722 | 2.845975e-52 | -8.615850e-47 |
| Msa0436330 | Msa1343180 | 0.865976 | 3.994230e-65 | -8.615850e-47 |
| Msa0436330 | Msa1359690 | 0.838638 | 2.553315e-57 | -8.615850e-47 |
| Msa0436330 | Msa1362130 | 0.835879 | 1.297796e-56 | -8.615850e-47 |
| Msa0436330 | Msa1364040 | 0.824078 | 9.808799e-54 | -8.615850e-47 |
| Msa0436330 | Msa1364410 | 0.816408 | 5.614731e-52 | -8.615850e-47 |
| Msa0436330 | Msa1365500 | 0.811440 | 6.993759e-51 | -8.615850e-47 |
| Msa0436330 | Msa1366150 | 0.868961 | 4.423097e-66 | -8.615850e-47 |
| Msa0436330 | Msa1367180 | 0.829394 | 5.276358e-55 | -8.615850e-47 |
| Msa0436330 | Msa1368750 | 0.863599 | 2.219030e-64 | -8.615850e-47 |
| Msa0436330 | Msa1374790 | 0.860555 | 1.904007e-63 | -8.615850e-47 |
| Msa0436330 | Msa1375280 | 0.823618 | 1.257364e-53 | -8.615850e-47 |
| Msa0436330 | Msa1375350 | 0.838916 | 2.164535e-57 | -8.615850e-47 |
| Msa0436330 | Msa1380120 | 0.851958 | 6.320163e-61 | -8.615850e-47 |
| Msa0436330 | Msa1381470 | 0.824416 | 8.168710e-54 | -8.615850e-47 |
| Msa0436330 | Msa1384150 | 0.856372 | 3.363003e-62 | -8.615850e-47 |
| Msa0436330 | Msa1387440 | 0.886682 | 2.765433e-72 | -8.615850e-47 |
| Msa0436330 | Msa1391500 | 0.826074 | 3.311700e-54 | -8.615850e-47 |
| Msa0436330 | Msa1392580 | 0.825523 | 4.475107e-54 | -8.615850e-47 |
| Msa0436330 | Msa1397400 | 0.834485 | 2.917334e-56 | -8.615850e-47 |
| Msa0436330 | Msa1398810 | 0.826025 | 3.402490e-54 | -8.615850e-47 |
| Msa0436330 | Msa1405460 | 0.837712 | 4.422112e-57 | -8.615850e-47 |
| Msa0436330 | Msa1409410 | 0.838360 | 3.012184e-57 | -8.615850e-47 |
| Msa0436330 | Msa1412000 | 0.801447 | 8.965027e-49 | -8.615850e-47 |
| Msa0436330 | Msa1415540 | 0.804430 | 2.168963e-49 | -8.615850e-47 |
| Msa0436330 | Msa1420950 | 0.845986 | 2.882994e-59 | -8.615850e-47 |
| Msa0436330 | Msa1426320 | 0.822199 | 2.691592e-53 | -8.615850e-47 |
| Msa0436330 | Msa1427110 | 0.803685 | 3.097830e-49 | -8.615850e-47 |
| Msa0436330 | Msa1429070 | 0.844605 | 6.817535e-59 | -8.615850e-47 |
| Msa0436330 | Msa1437930 | 0.822289 | 2.564788e-53 | -8.615850e-47 |
| Msa0436330 | Msa1442260 | 0.808291 | 3.328183e-50 | -8.615850e-47 |
| Msa0436330 | Msa1445120 | 0.841992 | 3.394565e-58 | -8.615850e-47 |
| Msa0436330 | Msa1446100 | 0.829586 | 4.738881e-55 | -8.615850e-47 |
| Msa0436330 | Msa1450190 | 0.836575 | 8.635895e-57 | -8.615850e-47 |
| Msa0436330 | Msa1451820 | 0.862483 | 4.910495e-64 | -8.615850e-47 |
| Msa0436330 | Msa1454010 | 0.837663 | 4.550133e-57 | -8.615850e-47 |
| Msa0436330 | Msa1459010 | 0.811049 | 8.503513e-51 | -8.615850e-47 |
| Msa0436330 | Msa1465360 | 0.818252 | 2.159413e-52 | -8.615850e-47 |
| Msa0241610 | Msa0436330 | 0.800620 | 1.323203e-48 | -8.615850e-47 |
| Msa0242590 | Msa0436330 | 0.834481 | 2.924051e-56 | -8.615850e-47 |
| Msa0249850 | Msa0436330 | 0.815861 | 7.441354e-52 | -8.615850e-47 |
| Msa0260510 | Msa0436330 | 0.841933 | 3.517710e-58 | -8.615850e-47 |
| Msa0269210 | Msa0436330 | 0.885634 | 6.866708e-72 | -8.615850e-47 |
| Msa0272260 | Msa0436330 | 0.866418 | 2.892821e-65 | -8.615850e-47 |
| Msa0274320 | Msa0436330 | 0.813655 | 2.293398e-51 | -8.615850e-47 |
| Msa0280790 | Msa0436330 | 0.834585 | 2.753582e-56 | -8.615850e-47 |
| Msa0281470 | Msa0436330 | 0.821925 | 3.115571e-53 | -8.615850e-47 |
| Msa0298470 | Msa0436330 | 0.840488 | 8.438306e-58 | -8.615850e-47 |
| Msa0298580 | Msa0436330 | 0.810176 | 1.312766e-50 | -8.615850e-47 |
| Msa0307270 | Msa0436330 | 0.838438 | 2.874864e-57 | -8.615850e-47 |
| Msa0320600 | Msa0436330 | 0.803087 | 4.119977e-49 | -8.615850e-47 |
| Msa0330380 | Msa0436330 | 0.808217 | 3.452328e-50 | -8.615850e-47 |
| Msa0340500 | Msa0436330 | 0.815892 | 7.324601e-52 | -8.615850e-47 |
| Msa0343010 | Msa0436330 | 0.848019 | 8.001528e-60 | -8.615850e-47 |
| Msa0361910 | Msa0436330 | 0.845499 | 3.909107e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436330 | MtrunA17_Chr8g0387931 | 97.065 | 477 | 11 | 2 | 1 | 475 | 1 | 476 | 0.0 | 905 |
| Msa0436330 | MtrunA17_Chr8g0370431 | 47.126 | 87 | 40 | 2 | 257 | 337 | 29 | 115 | 1.10e-12 | 65.5 |
| Msa0436330 | MtrunA17_Chr3g0143991 | 41.111 | 90 | 50 | 1 | 255 | 341 | 35 | 124 | 3.37e-12 | 64.3 |
| Msa0436330 | MtrunA17_Chr7g0242251 | 45.205 | 73 | 37 | 1 | 261 | 330 | 47 | 119 | 6.13e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436330 | AT4G11080.1 | 57.609 | 460 | 162 | 7 | 10 | 464 | 11 | 442 | 3.33e-163 | 469 |
| Msa0436330 | AT4G23800.2 | 57.083 | 480 | 159 | 9 | 1 | 467 | 1 | 446 | 7.70e-161 | 463 |
| Msa0436330 | AT4G23800.1 | 56.875 | 480 | 166 | 8 | 1 | 467 | 1 | 452 | 5.76e-160 | 461 |
| Msa0436330 | AT3G51880.4 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 7.85e-12 | 63.9 |
| Msa0436330 | AT3G51880.5 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.12e-11 | 63.9 |
| Msa0436330 | AT3G51880.1 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.12e-11 | 63.9 |
| Msa0436330 | AT3G51880.3 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.12e-11 | 63.9 |
| Msa0436330 | AT3G51880.2 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.30e-11 | 63.9 |
| Msa0436330 | AT4G35570.1 | 38.824 | 85 | 49 | 2 | 251 | 332 | 20 | 104 | 4.71e-11 | 60.8 |
| Msa0436330 | AT4G35570.2 | 38.824 | 85 | 49 | 2 | 251 | 332 | 20 | 104 | 4.71e-11 | 60.8 |
| Msa0436330 | AT1G20696.2 | 35.294 | 119 | 72 | 2 | 260 | 375 | 30 | 146 | 9.22e-11 | 60.5 |
Find 108 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGACATTTCAAACATTT+TGG | 0.072036 | 3_2:-89904117 | Msa0436330:CDS |
| CTTCATGTTTCTGAAGTTTC+AGG | 0.139396 | 3_2:+89903117 | None:intergenic |
| TTGCTTCAAGATCTCATCTT+TGG | 0.243800 | 3_2:+89904670 | None:intergenic |
| AAATCCAGAGGCAGAATTTA+AGG | 0.251785 | 3_2:-89904135 | Msa0436330:CDS |
| CTTGCAATTGCTCAAGAAAA+AGG | 0.274473 | 3_2:-89903093 | Msa0436330:CDS |
| CTTCTTCGGCATACATGTTA+TGG | 0.283880 | 3_2:-89904310 | Msa0436330:CDS |
| GTTTGTAAGCCTCCATTTCT+TGG | 0.287307 | 3_2:+89903189 | None:intergenic |
| CTTCCTCTTGATTTCTTTGT+CGG | 0.303855 | 3_2:+89904926 | None:intergenic |
| CCACTCTTCAGATGTGATCT+TGG | 0.324738 | 3_2:+89903367 | None:intergenic |
| TGCTCGAAAGATCGTTCCTT+TGG | 0.352886 | 3_2:+89904767 | None:intergenic |
| GCTTGGTATTTCTCCTCATA+AGG | 0.353624 | 3_2:+89904056 | None:intergenic |
| CATCCTCATATATTCTATTC+AGG | 0.354033 | 3_2:-89902968 | Msa0436330:intron |
| AAAGCTGACATAGGATGCTT+TGG | 0.369497 | 3_2:+89903852 | None:intergenic |
| CAAATCTATTGTTGCAAAGC+TGG | 0.374240 | 3_2:-89902571 | Msa0436330:CDS |
| GTTAGACAGATTCTCAGAAA+TGG | 0.376205 | 3_2:+89904829 | None:intergenic |
| ATTGAACATATATGCTTGAT+TGG | 0.380678 | 3_2:-89902500 | Msa0436330:three_prime_UTR |
| TTTAGATGGCTAAGAAGAAC+AGG | 0.380697 | 3_2:-89903223 | Msa0436330:intron |
| AGCTATGATGTTGGAATCAT+TGG | 0.383362 | 3_2:+89904871 | None:intergenic |
| TTTGTAAGCCTCCATTTCTT+GGG | 0.388249 | 3_2:+89903190 | None:intergenic |
| ATAGGATGCTTTGGTTTCAA+TGG | 0.388725 | 3_2:+89903861 | None:intergenic |
| CATAATTGTACCTCTTCATA+AGG | 0.394411 | 3_2:+89903317 | None:intergenic |
| AATTCAGAAATGTATTGAAA+TGG | 0.406872 | 3_2:+89905006 | None:intergenic |
| TTCCTCTTGATTTCTTTGTC+GGG | 0.407431 | 3_2:+89904927 | None:intergenic |
| GTAACAGTTGAATCGGAAAA+TGG | 0.407581 | 3_2:+89902395 | None:intergenic |
| TTTCTTGAAGGAATAACAAT+TGG | 0.412246 | 3_2:-89902431 | Msa0436330:three_prime_UTR |
| TTCTTCGGCATACATGTTAT+GGG | 0.422963 | 3_2:-89904309 | Msa0436330:CDS |
| TGCAGACAACAAGGGTGTCT+TGG | 0.424980 | 3_2:-89903793 | Msa0436330:CDS |
| ATGTCCTTAAATTCTGCCTC+TGG | 0.426198 | 3_2:+89904131 | None:intergenic |
| GCAAGATCTGCTTGAGATGC+AGG | 0.431264 | 3_2:-89904747 | Msa0436330:CDS |
| AGCATGTTTCCTCCAACTCC+TGG | 0.432342 | 3_2:+89902818 | None:intergenic |
| TTTGGCTTTCAACAGCTCTT+CGG | 0.438123 | 3_2:+89904688 | None:intergenic |
| ATGATTGGTGCAGGTTAAGA+AGG | 0.440565 | 3_2:-89904159 | Msa0436330:intron |
| AGAAGCAAGGAAGAGTATAC+TGG | 0.445784 | 3_2:-89902849 | Msa0436330:CDS |
| TGTTCCTTGTCTTTCACCAT+AGG | 0.447107 | 3_2:+89904380 | None:intergenic |
| TGATTTCTTTGTCGGGATCT+CGG | 0.448117 | 3_2:+89904934 | None:intergenic |
| TAGTTGTAATAATTTCTTGA+AGG | 0.451158 | 3_2:-89902443 | Msa0436330:three_prime_UTR |
| AGATGAGATCTTGAAGCAAA+AGG | 0.457726 | 3_2:-89904666 | Msa0436330:CDS |
| AAAAGAATTCCGATCCAAAC+AGG | 0.460635 | 3_2:-89903004 | Msa0436330:CDS |
| GGATGCATACAAGAAGGAAA+TGG | 0.463280 | 3_2:-89902604 | Msa0436330:CDS |
| AATGATTCCAACATCATAGC+TGG | 0.469777 | 3_2:-89904869 | Msa0436330:CDS |
| GGAGCAATATGCCCAAGAAA+TGG | 0.469866 | 3_2:-89903201 | Msa0436330:CDS |
| GCTTGAGATGCAGGAAAAGA+TGG | 0.475770 | 3_2:-89904738 | Msa0436330:CDS |
| TTAGACAGATTCTCAGAAAT+GGG | 0.478209 | 3_2:+89904830 | None:intergenic |
| ACACACTTGTTTCAATGAAG+TGG | 0.480362 | 3_2:-89902793 | Msa0436330:CDS |
| GAATCTGTCTAACCCTAAGA+AGG | 0.489907 | 3_2:-89904819 | Msa0436330:CDS |
| TCACCTGAATAGAATATATG+AGG | 0.495351 | 3_2:+89902965 | None:intergenic |
| ATGTTGGAATCATTGGTTGA+TGG | 0.499815 | 3_2:+89904878 | None:intergenic |
| CAAAGTCAATTATTACTCGT+TGG | 0.500645 | 3_2:+89902539 | None:intergenic |
| AGACAAGGAACAAGAAAAGA+AGG | 0.503199 | 3_2:-89904369 | Msa0436330:CDS |
| AGTATACTGGAGGAACGTCC+AGG | 0.504758 | 3_2:-89902836 | Msa0436330:CDS |
| CAATGTACAGAATTTGCCTA+TGG | 0.505456 | 3_2:-89904396 | Msa0436330:intron |
| AATTGAGGCAATGAAACTCT+TGG | 0.505662 | 3_2:-89903988 | Msa0436330:CDS |
| AGGAAGCAGAAAGGCTCTCA+AGG | 0.506919 | 3_2:-89904909 | Msa0436330:CDS |
| TGTTGGAATCATTGGTTGAT+GGG | 0.514270 | 3_2:+89904879 | None:intergenic |
| CTGGAGGAACGTCCAGGAGT+TGG | 0.521217 | 3_2:-89902830 | Msa0436330:CDS |
| CATAACATGTATGCCGAAGA+AGG | 0.530436 | 3_2:+89904311 | None:intergenic |
| TCTTGTTTACTAATGATAGG+AGG | 0.532413 | 3_2:-89903827 | Msa0436330:CDS |
| CAAGAAGAACAAGAAAGAGA+AGG | 0.537336 | 3_2:-89903886 | Msa0436330:CDS |
| TGCAAATCTTATGAAGGAAG+AGG | 0.537954 | 3_2:-89903147 | Msa0436330:CDS |
| GAGGAACGTCCAGGAGTTGG+AGG | 0.538510 | 3_2:-89902827 | Msa0436330:CDS |
| TGTTATGGGTCAAAGATCAA+TGG | 0.542670 | 3_2:-89904295 | Msa0436330:CDS |
| ATGATTCCAACATCATAGCT+GGG | 0.548826 | 3_2:-89904868 | Msa0436330:CDS |
| GGCAATGAAACTCTTGGAAG+AGG | 0.550214 | 3_2:-89903982 | Msa0436330:CDS |
| TGGCAAAGCATCTGAAGCAA+TGG | 0.552222 | 3_2:-89902625 | Msa0436330:CDS |
| CTTCGGTCTTCTCTTTCTCG+AGG | 0.553334 | 3_2:+89904705 | None:intergenic |
| AGCTATTCTTGCAGACAACA+AGG | 0.554530 | 3_2:-89903802 | Msa0436330:CDS |
| AATAGAATATATGAGGATGC+AGG | 0.554919 | 3_2:+89902972 | None:intergenic |
| CTTGTTTACTAATGATAGGA+GGG | 0.555181 | 3_2:-89903826 | Msa0436330:CDS |
| GTTGGAATCATTGGTTGATG+GGG | 0.557105 | 3_2:+89904880 | None:intergenic |
| GTTTATGCAATTCAAACAAG+AGG | 0.559702 | 3_2:-89903922 | Msa0436330:CDS |
| GTGAGGAAGATAAACAATTG+TGG | 0.559951 | 3_2:-89902650 | Msa0436330:CDS |
| GGGACTAAATGGAAGACAGT+TGG | 0.560896 | 3_2:-89904095 | Msa0436330:CDS |
| GAAGATAAACAATTGTGGAA+TGG | 0.568238 | 3_2:-89902645 | Msa0436330:CDS |
| AAAGAAACAACAAAAGCCAA+AGG | 0.574463 | 3_2:-89904783 | Msa0436330:CDS |
| AGAAGAGAAGAAGCCTTATG+AGG | 0.578854 | 3_2:-89904069 | Msa0436330:CDS |
| ATCCCGACAAAGAAATCAAG+AGG | 0.579809 | 3_2:-89904929 | Msa0436330:CDS |
| ATGAACTAACTAACCATGGT+GGG | 0.581194 | 3_2:+89904581 | None:intergenic |
| ACAGAAGCAGAAGACTGCTA+TGG | 0.587399 | 3_2:-89903958 | Msa0436330:CDS |
| GAAATCAAGAGGAAGCAGAA+AGG | 0.590805 | 3_2:-89904918 | Msa0436330:CDS |
| CCAAGATCACATCTGAAGAG+TGG | 0.592813 | 3_2:-89903367 | Msa0436330:CDS |
| GGAGGCTGCAAATCTTATGA+AGG | 0.596196 | 3_2:-89903153 | Msa0436330:CDS |
| TGCCTCCCCAGCTATGATGT+TGG | 0.596788 | 3_2:+89904862 | None:intergenic |
| AGCAATGGATGCATACAAGA+AGG | 0.597525 | 3_2:-89902610 | Msa0436330:CDS |
| AGACAACAAGGGTGTCTTGG+AGG | 0.604107 | 3_2:-89903790 | Msa0436330:intron |
| TGCATACAAGAAGGAAATGG+AGG | 0.608817 | 3_2:-89902601 | Msa0436330:CDS |
| TTCCATGCAGCAAAGAAGCA+AGG | 0.615026 | 3_2:-89902862 | Msa0436330:intron |
| GAAAGAATTCAAACCCACCA+TGG | 0.617162 | 3_2:-89904594 | Msa0436330:intron |
| CGGGATCTCGGCAACTACGT+CGG | 0.621564 | 3_2:+89904946 | None:intergenic |
| ACTTGTTTCAATGAAGTGGA+AGG | 0.625574 | 3_2:-89902789 | Msa0436330:intron |
| AATCTGTCTAACCCTAAGAA+GGG | 0.626603 | 3_2:-89904818 | Msa0436330:CDS |
| CAAACTGAAGAAAGATGAGG+AGG | 0.628380 | 3_2:-89903171 | Msa0436330:CDS |
| TTATTTGCAAGTAATTACAA+AGG | 0.633815 | 3_2:-89904021 | Msa0436330:CDS |
| TTACAAACTGAAGAAAGATG+AGG | 0.634789 | 3_2:-89903174 | Msa0436330:CDS |
| GCAATATGCCCAAGAAATGG+AGG | 0.637518 | 3_2:-89903198 | Msa0436330:CDS |
| AGCAAGGAAGAGTATACTGG+AGG | 0.646246 | 3_2:-89902846 | Msa0436330:CDS |
| AATGAACTAACTAACCATGG+TGG | 0.650169 | 3_2:+89904580 | None:intergenic |
| ATTTATATAGGATATGAGTG+AGG | 0.652499 | 3_2:-89902667 | Msa0436330:intron |
| GATGAAGAACTCGAGAATCG+TGG | 0.659301 | 3_2:-89904644 | Msa0436330:CDS |
| TTTGCCTATGGTGAAAGACA+AGG | 0.660185 | 3_2:-89904384 | Msa0436330:CDS |
| GGTCAAAGATCAATGGCATG+AGG | 0.662193 | 3_2:-89904288 | Msa0436330:intron |
| TTCCAACATCATAGCTGGGG+AGG | 0.663327 | 3_2:-89904864 | Msa0436330:CDS |
| GGTTAAGAAGGAAAATCCAG+AGG | 0.669344 | 3_2:-89904147 | Msa0436330:CDS |
| TGATTCCAACATCATAGCTG+GGG | 0.673997 | 3_2:-89904867 | Msa0436330:CDS |
| AGAACTCGAGAATCGTGGCA+AGG | 0.678863 | 3_2:-89904639 | Msa0436330:CDS |
| GTTCAATACAGATTTGAACA+TGG | 0.681933 | 3_2:+89902516 | None:intergenic |
| GCTATTCTTGCAGACAACAA+GGG | 0.690298 | 3_2:-89903801 | Msa0436330:CDS |
| TTAGATGGCTAAGAAGAACA+GGG | 0.692791 | 3_2:-89903222 | Msa0436330:intron |
| TCAGAAGAAGAAACATAACA+AGG | 0.711427 | 3_2:-89903030 | Msa0436330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTACTATTATTTTAT+TGG | - | chr3_2:89902869-89902888 | Msa0436330:intron | 10.0% |
| !! | ATTGAATAAAATTTACTTAA+TGG | - | chr3_2:89904007-89904026 | Msa0436330:CDS | 10.0% |
| !! | AAATATTAATGAAAAACTAA+TGG | + | chr3_2:89904133-89904152 | None:intergenic | 10.0% |
| !!! | ACTATTATTATATATTGATT+TGG | - | chr3_2:89904720-89904739 | Msa0436330:CDS | 10.0% |
| !!! | TTTTTTAATTTTTAGGGTTT+AGG | - | chr3_2:89902926-89902945 | Msa0436330:intron | 15.0% |
| !!! | TTTTTAATTTTTAGGGTTTA+GGG | - | chr3_2:89902927-89902946 | Msa0436330:intron | 15.0% |
| !! | AATCATAATGTTAATTCTAT+TGG | + | chr3_2:89903990-89904009 | None:intergenic | 15.0% |
| !! | CATATCCTATATAAATAAAT+GGG | + | chr3_2:89904748-89904767 | None:intergenic | 15.0% |
| !! | TCATATCCTATATAAATAAA+TGG | + | chr3_2:89904749-89904768 | None:intergenic | 15.0% |
| !! | AATTCAGAAATGTATTGAAA+TGG | + | chr3_2:89902416-89902435 | None:intergenic | 20.0% |
| !! | AGACATTAAATGAATATTAC+AGG | + | chr3_2:89902970-89902989 | None:intergenic | 20.0% |
| !! | TTATTTGCAAGTAATTACAA+AGG | - | chr3_2:89903398-89903417 | Msa0436330:intron | 20.0% |
| !!! | TTTTCTTGTTTACTAATGAT+AGG | - | chr3_2:89903589-89903608 | Msa0436330:intron | 20.0% |
| !! | GAATAAAATTTACTTAATGG+TGG | - | chr3_2:89904010-89904029 | Msa0436330:CDS | 20.0% |
| !! | TAGTTGTAATAATTTCTTGA+AGG | - | chr3_2:89904976-89904995 | Msa0436330:five_prime_UTR | 20.0% |
| ! | AAGAAGGAAAAGAAAAAGAA+TGG | - | chr3_2:89903066-89903085 | Msa0436330:CDS | 25.0% |
| ! | AGAAGGAAAAGAAAAAGAAT+GGG | - | chr3_2:89903067-89903086 | Msa0436330:CDS | 25.0% |
| ! | AGCAATCAAATCTAACTATT+AGG | - | chr3_2:89903168-89903187 | Msa0436330:CDS | 25.0% |
| !! | TGAATTTATGGATTGATGAT+TGG | - | chr3_2:89903245-89903264 | Msa0436330:intron | 25.0% |
| !! | TAAGGACATTTCAAACATTT+TGG | - | chr3_2:89903302-89903321 | Msa0436330:intron | 25.0% |
| !! | AAGGACATTTCAAACATTTT+GGG | - | chr3_2:89903303-89903322 | Msa0436330:intron | 25.0% |
| ! | AGGTAATTGATCATATGATT+GGG | - | chr3_2:89903649-89903668 | Msa0436330:intron | 25.0% |
| ! | AATAAGCTGTTTATTCAAAC+AGG | + | chr3_2:89903675-89903694 | None:intergenic | 25.0% |
| ! | TTTCTTACACTCTACTTAAT+TGG | - | chr3_2:89904168-89904187 | Msa0436330:intron | 25.0% |
| !! | CTTAATTGGAAACTTTTAGA+TGG | - | chr3_2:89904182-89904201 | Msa0436330:intron | 25.0% |
| ! | AAAAACTGAAAACATGATCA+AGG | - | chr3_2:89904350-89904369 | Msa0436330:CDS | 25.0% |
| !! | GAAAGTCAATTTAACTTTGT+AGG | - | chr3_2:89904475-89904494 | Msa0436330:intron | 25.0% |
| ! | TGGTTCCCATTTATTTATAT+AGG | - | chr3_2:89904740-89904759 | Msa0436330:CDS | 25.0% |
| ! | ATTTATATAGGATATGAGTG+AGG | - | chr3_2:89904752-89904771 | Msa0436330:CDS | 25.0% |
| ! | ATTGAACATATATGCTTGAT+TGG | - | chr3_2:89904919-89904938 | Msa0436330:CDS | 25.0% |
| ! | TTTCTTGAAGGAATAACAAT+TGG | - | chr3_2:89904988-89905007 | Msa0436330:five_prime_UTR | 25.0% |
| !! | TTTCTCTCTCGTTTTAACAA+TGG | - | chr3_2:89902450-89902469 | Msa0436330:three_prime_UTR | 30.0% |
| TTAGACAGATTCTCAGAAAT+GGG | + | chr3_2:89902592-89902611 | None:intergenic | 30.0% | |
| AAAGAAACAACAAAAGCCAA+AGG | - | chr3_2:89902636-89902655 | Msa0436330:CDS | 30.0% | |
| TGAAATGAACTAACTAACCA+TGG | + | chr3_2:89902845-89902864 | None:intergenic | 30.0% | |
| ! | TTTAGGGTTTGTGTTGAAAT+TGG | - | chr3_2:89902943-89902962 | Msa0436330:intron | 30.0% |
| GATGTTGCAATGTGAATTTA+TGG | - | chr3_2:89903233-89903252 | Msa0436330:intron | 30.0% | |
| ! | AGGACATTTCAAACATTTTG+GGG | - | chr3_2:89903304-89903323 | Msa0436330:intron | 30.0% |
| AAAGGAAAAACGTGAAATTG+AGG | - | chr3_2:89903416-89903435 | Msa0436330:intron | 30.0% | |
| GTTTATGCAATTCAAACAAG+AGG | - | chr3_2:89903497-89903516 | Msa0436330:intron | 30.0% | |
| AACAAGAAAAAAGCTGACAT+AGG | + | chr3_2:89903579-89903598 | None:intergenic | 30.0% | |
| ! | TCTTGTTTACTAATGATAGG+AGG | - | chr3_2:89903592-89903611 | Msa0436330:intron | 30.0% |
| CTTGTTTACTAATGATAGGA+GGG | - | chr3_2:89903593-89903612 | Msa0436330:intron | 30.0% | |
| GAGGTAATTGATCATATGAT+TGG | - | chr3_2:89903648-89903667 | Msa0436330:intron | 30.0% | |
| CATAAGTTGTGAGACTATTT+GGG | + | chr3_2:89903873-89903892 | None:intergenic | 30.0% | |
| ACATGACAGAAGAACAAAAA+AGG | - | chr3_2:89904079-89904098 | Msa0436330:CDS | 30.0% | |
| CATAATTGTACCTCTTCATA+AGG | + | chr3_2:89904105-89904124 | None:intergenic | 30.0% | |
| TTACAAACTGAAGAAAGATG+AGG | - | chr3_2:89904245-89904264 | Msa0436330:intron | 30.0% | |
| TCAGAAGAAGAAACATAACA+AGG | - | chr3_2:89904389-89904408 | Msa0436330:CDS | 30.0% | |
| AATAGAATATATGAGGATGC+AGG | + | chr3_2:89904450-89904469 | None:intergenic | 30.0% | |
| CATCCTCATATATTCTATTC+AGG | - | chr3_2:89904451-89904470 | Msa0436330:intron | 30.0% | |
| TCACCTGAATAGAATATATG+AGG | + | chr3_2:89904457-89904476 | None:intergenic | 30.0% | |
| GAAGATAAACAATTGTGGAA+TGG | - | chr3_2:89904774-89904793 | Msa0436330:CDS | 30.0% | |
| CAAAGTCAATTATTACTCGT+TGG | + | chr3_2:89904883-89904902 | None:intergenic | 30.0% | |
| GTTCAATACAGATTTGAACA+TGG | + | chr3_2:89904906-89904925 | None:intergenic | 30.0% | |
| TTCCTCTTGATTTCTTTGTC+GGG | + | chr3_2:89902495-89902514 | None:intergenic | 35.0% | |
| CTTCCTCTTGATTTCTTTGT+CGG | + | chr3_2:89902496-89902515 | None:intergenic | 35.0% | |
| ! | TGTTGGAATCATTGGTTGAT+GGG | + | chr3_2:89902543-89902562 | None:intergenic | 35.0% |
| ! | ATGTTGGAATCATTGGTTGA+TGG | + | chr3_2:89902544-89902563 | None:intergenic | 35.0% |
| AGCTATGATGTTGGAATCAT+TGG | + | chr3_2:89902551-89902570 | None:intergenic | 35.0% | |
| AATGATTCCAACATCATAGC+TGG | - | chr3_2:89902550-89902569 | Msa0436330:exon | 35.0% | |
| ATGATTCCAACATCATAGCT+GGG | - | chr3_2:89902551-89902570 | Msa0436330:CDS | 35.0% | |
| GTTAGACAGATTCTCAGAAA+TGG | + | chr3_2:89902593-89902612 | None:intergenic | 35.0% | |
| AATCTGTCTAACCCTAAGAA+GGG | - | chr3_2:89902601-89902620 | Msa0436330:CDS | 35.0% | |
| TTGCTTCAAGATCTCATCTT+TGG | + | chr3_2:89902752-89902771 | None:intergenic | 35.0% | |
| AGATGAGATCTTGAAGCAAA+AGG | - | chr3_2:89902753-89902772 | Msa0436330:intron | 35.0% | |
| ATGAACTAACTAACCATGGT+GGG | + | chr3_2:89902841-89902860 | None:intergenic | 35.0% | |
| AATGAACTAACTAACCATGG+TGG | + | chr3_2:89902842-89902861 | None:intergenic | 35.0% | |
| CAATGTACAGAATTTGCCTA+TGG | - | chr3_2:89903023-89903042 | Msa0436330:CDS | 35.0% | |
| AGACAAGGAACAAGAAAAGA+AGG | - | chr3_2:89903050-89903069 | Msa0436330:CDS | 35.0% | |
| !!! | AAGAAGGCCTTTTTTTCTCA+GGG | + | chr3_2:89903095-89903114 | None:intergenic | 35.0% |
| TGAGAAAAAAAGGCCTTCTT+CGG | - | chr3_2:89903095-89903114 | Msa0436330:CDS | 35.0% | |
| TTCTTCGGCATACATGTTAT+GGG | - | chr3_2:89903110-89903129 | Msa0436330:CDS | 35.0% | |
| TGTTATGGGTCAAAGATCAA+TGG | - | chr3_2:89903124-89903143 | Msa0436330:CDS | 35.0% | |
| AAATCCAGAGGCAGAATTTA+AGG | - | chr3_2:89903284-89903303 | Msa0436330:intron | 35.0% | |
| !! | CAAACATTTTGGGGACTAAA+TGG | - | chr3_2:89903313-89903332 | Msa0436330:intron | 35.0% |
| GAAATACCAAGCTGAAAAAG+AGG | - | chr3_2:89903374-89903393 | Msa0436330:CDS | 35.0% | |
| !!! | AATAAGCCTCTTTTTCAGCT+TGG | + | chr3_2:89903383-89903402 | None:intergenic | 35.0% |
| AATTGAGGCAATGAAACTCT+TGG | - | chr3_2:89903431-89903450 | Msa0436330:intron | 35.0% | |
| CAAGAAGAACAAGAAAGAGA+AGG | - | chr3_2:89903533-89903552 | Msa0436330:intron | 35.0% | |
| ! | ATAGGATGCTTTGGTTTCAA+TGG | + | chr3_2:89903561-89903580 | None:intergenic | 35.0% |
| GCATAAGTTGTGAGACTATT+TGG | + | chr3_2:89903874-89903893 | None:intergenic | 35.0% | |
| TGTGAATGCTACACAACATT+TGG | + | chr3_2:89903918-89903937 | None:intergenic | 35.0% | |
| ! | TGTGTAGCATTCACACATTT+TGG | - | chr3_2:89903923-89903942 | Msa0436330:CDS | 35.0% |
| ! | CACATTTTGGACAACACTAA+AGG | - | chr3_2:89903936-89903955 | Msa0436330:CDS | 35.0% |
| ! | ACAAAAAAGGCCTTATGAAG+AGG | - | chr3_2:89904092-89904111 | Msa0436330:CDS | 35.0% |
| TTTAGATGGCTAAGAAGAAC+AGG | - | chr3_2:89904196-89904215 | Msa0436330:intron | 35.0% | |
| TTAGATGGCTAAGAAGAACA+GGG | - | chr3_2:89904197-89904216 | Msa0436330:intron | 35.0% | |
| TTTGTAAGCCTCCATTTCTT+GGG | + | chr3_2:89904232-89904251 | None:intergenic | 35.0% | |
| TGCAAATCTTATGAAGGAAG+AGG | - | chr3_2:89904272-89904291 | Msa0436330:intron | 35.0% | |
| !! | CTTCATGTTTCTGAAGTTTC+AGG | + | chr3_2:89904305-89904324 | None:intergenic | 35.0% |
| ! | CTTTTTCTTGAGCAATTGCA+AGG | + | chr3_2:89904328-89904347 | None:intergenic | 35.0% |
| CTTGCAATTGCTCAAGAAAA+AGG | - | chr3_2:89904326-89904345 | Msa0436330:CDS | 35.0% | |
| AAAAGAATTCCGATCCAAAC+AGG | - | chr3_2:89904415-89904434 | Msa0436330:intron | 35.0% | |
| ACACACTTGTTTCAATGAAG+TGG | - | chr3_2:89904626-89904645 | Msa0436330:CDS | 35.0% | |
| ACTTGTTTCAATGAAGTGGA+AGG | - | chr3_2:89904630-89904649 | Msa0436330:CDS | 35.0% | |
| GTGAGGAAGATAAACAATTG+TGG | - | chr3_2:89904769-89904788 | Msa0436330:CDS | 35.0% | |
| CAAATCTATTGTTGCAAAGC+TGG | - | chr3_2:89904848-89904867 | Msa0436330:CDS | 35.0% | |
| TGATTTCTTTGTCGGGATCT+CGG | + | chr3_2:89902488-89902507 | None:intergenic | 40.0% | |
| ATCCCGACAAAGAAATCAAG+AGG | - | chr3_2:89902490-89902509 | Msa0436330:three_prime_UTR | 40.0% | |
| GAAATCAAGAGGAAGCAGAA+AGG | - | chr3_2:89902501-89902520 | Msa0436330:three_prime_UTR | 40.0% | |
| ! | GTTGGAATCATTGGTTGATG+GGG | + | chr3_2:89902542-89902561 | None:intergenic | 40.0% |
| TGATTCCAACATCATAGCTG+GGG | - | chr3_2:89902552-89902571 | Msa0436330:CDS | 40.0% | |
| GAATCTGTCTAACCCTAAGA+AGG | - | chr3_2:89902600-89902619 | Msa0436330:CDS | 40.0% | |
| ! | ATGCAGCTTTTCCCTTCTTA+GGG | + | chr3_2:89902615-89902634 | None:intergenic | 40.0% |
| !! | TTTGGCTTTCAACAGCTCTT+CGG | + | chr3_2:89902734-89902753 | None:intergenic | 40.0% |
| GAAAGAATTCAAACCCACCA+TGG | - | chr3_2:89902825-89902844 | Msa0436330:CDS | 40.0% | |
| TTTGCCTATGGTGAAAGACA+AGG | - | chr3_2:89903035-89903054 | Msa0436330:CDS | 40.0% | |
| TGTTCCTTGTCTTTCACCAT+AGG | + | chr3_2:89903042-89903061 | None:intergenic | 40.0% | |
| !!! | GAAGAAGGCCTTTTTTTCTC+AGG | + | chr3_2:89903096-89903115 | None:intergenic | 40.0% |
| CATAACATGTATGCCGAAGA+AGG | + | chr3_2:89903111-89903130 | None:intergenic | 40.0% | |
| CTTCTTCGGCATACATGTTA+TGG | - | chr3_2:89903109-89903128 | Msa0436330:CDS | 40.0% | |
| ! | TATGGATTGATGATTGGTGC+AGG | - | chr3_2:89903251-89903270 | Msa0436330:intron | 40.0% |
| ATGATTGGTGCAGGTTAAGA+AGG | - | chr3_2:89903260-89903279 | Msa0436330:intron | 40.0% | |
| GGTTAAGAAGGAAAATCCAG+AGG | - | chr3_2:89903272-89903291 | Msa0436330:intron | 40.0% | |
| ATGTCCTTAAATTCTGCCTC+TGG | + | chr3_2:89903291-89903310 | None:intergenic | 40.0% | |
| ! | AGAAGAGAAGAAGCCTTATG+AGG | - | chr3_2:89903350-89903369 | Msa0436330:CDS | 40.0% |
| GCTTGGTATTTCTCCTCATA+AGG | + | chr3_2:89903366-89903385 | None:intergenic | 40.0% | |
| AAAGCTGACATAGGATGCTT+TGG | + | chr3_2:89903570-89903589 | None:intergenic | 40.0% | |
| AGCTATTCTTGCAGACAACA+AGG | - | chr3_2:89903617-89903636 | Msa0436330:intron | 40.0% | |
| GCTATTCTTGCAGACAACAA+GGG | - | chr3_2:89903618-89903637 | Msa0436330:intron | 40.0% | |
| GTTTGTAAGCCTCCATTTCT+TGG | + | chr3_2:89904233-89904252 | None:intergenic | 40.0% | |
| CAAACTGAAGAAAGATGAGG+AGG | - | chr3_2:89904248-89904267 | Msa0436330:intron | 40.0% | |
| ! | TCTTTTAGGCCTGTTTGGAT+CGG | + | chr3_2:89904427-89904446 | None:intergenic | 40.0% |
| ! | TATGAGGATGCAGGTCTTTT+AGG | + | chr3_2:89904441-89904460 | None:intergenic | 40.0% |
| ! | AGAAGCAAGGAAGAGTATAC+TGG | - | chr3_2:89904570-89904589 | Msa0436330:intron | 40.0% |
| AGCAATGGATGCATACAAGA+AGG | - | chr3_2:89904809-89904828 | Msa0436330:CDS | 40.0% | |
| GGATGCATACAAGAAGGAAA+TGG | - | chr3_2:89904815-89904834 | Msa0436330:CDS | 40.0% | |
| TGCATACAAGAAGGAAATGG+AGG | - | chr3_2:89904818-89904837 | Msa0436330:CDS | 40.0% | |
| ! | GATGCAGCTTTTCCCTTCTT+AGG | + | chr3_2:89902616-89902635 | None:intergenic | 45.0% |
| TGCTCGAAAGATCGTTCCTT+TGG | + | chr3_2:89902655-89902674 | None:intergenic | 45.0% | |
| GCTTGAGATGCAGGAAAAGA+TGG | - | chr3_2:89902681-89902700 | Msa0436330:intron | 45.0% | |
| GATGAAGAACTCGAGAATCG+TGG | - | chr3_2:89902775-89902794 | Msa0436330:intron | 45.0% | |
| ATGGGTGCCCTGAGAAAAAA+AGG | - | chr3_2:89903085-89903104 | Msa0436330:CDS | 45.0% | |
| GGTCAAAGATCAATGGCATG+AGG | - | chr3_2:89903131-89903150 | Msa0436330:CDS | 45.0% | |
| GGGACTAAATGGAAGACAGT+TGG | - | chr3_2:89903324-89903343 | Msa0436330:intron | 45.0% | |
| GGCAATGAAACTCTTGGAAG+AGG | - | chr3_2:89903437-89903456 | Msa0436330:intron | 45.0% | |
| ACAGAAGCAGAAGACTGCTA+TGG | - | chr3_2:89903461-89903480 | Msa0436330:intron | 45.0% | |
| AACACTAAAGGCAGATGAGC+CGG | - | chr3_2:89903948-89903967 | Msa0436330:CDS | 45.0% | |
| CCACTCTTCAGATGTGATCT+TGG | + | chr3_2:89904055-89904074 | None:intergenic | 45.0% | |
| CCAAGATCACATCTGAAGAG+TGG | - | chr3_2:89904052-89904071 | Msa0436330:CDS | 45.0% | |
| GGAGCAATATGCCCAAGAAA+TGG | - | chr3_2:89904218-89904237 | Msa0436330:intron | 45.0% | |
| GCAATATGCCCAAGAAATGG+AGG | - | chr3_2:89904221-89904240 | Msa0436330:intron | 45.0% | |
| GGAGGCTGCAAATCTTATGA+AGG | - | chr3_2:89904266-89904285 | Msa0436330:intron | 45.0% | |
| TTCCATGCAGCAAAGAAGCA+AGG | - | chr3_2:89904557-89904576 | Msa0436330:intron | 45.0% | |
| TTCCTTGCTTCTTTGCTGCA+TGG | + | chr3_2:89904562-89904581 | None:intergenic | 45.0% | |
| ! | AGCAAGGAAGAGTATACTGG+AGG | - | chr3_2:89904573-89904592 | Msa0436330:intron | 45.0% |
| ! | TGGCAAAGCATCTGAAGCAA+TGG | - | chr3_2:89904794-89904813 | Msa0436330:CDS | 45.0% |
| !!! | ATATCATTTTTTTAATTTTT+AGG | - | chr3_2:89902919-89902938 | Msa0436330:intron | 5.0% |
| !!! | TATCATTTTTTTAATTTTTA+GGG | - | chr3_2:89902920-89902939 | Msa0436330:intron | 5.0% |
| !!! | TTTTAATTTTTTTTTTATGT+AGG | - | chr3_2:89904665-89904684 | Msa0436330:CDS | 5.0% |
| AGGAAGCAGAAAGGCTCTCA+AGG | - | chr3_2:89902510-89902529 | Msa0436330:three_prime_UTR | 50.0% | |
| TTCCAACATCATAGCTGGGG+AGG | - | chr3_2:89902555-89902574 | Msa0436330:CDS | 50.0% | |
| GCAAGATCTGCTTGAGATGC+AGG | - | chr3_2:89902672-89902691 | Msa0436330:intron | 50.0% | |
| CTTCGGTCTTCTCTTTCTCG+AGG | + | chr3_2:89902717-89902736 | None:intergenic | 50.0% | |
| AGAACTCGAGAATCGTGGCA+AGG | - | chr3_2:89902780-89902799 | Msa0436330:intron | 50.0% | |
| !! | TGCAGACAACAAGGGTGTCT+TGG | - | chr3_2:89903626-89903645 | Msa0436330:intron | 50.0% |
| !! | AGACAACAAGGGTGTCTTGG+AGG | - | chr3_2:89903629-89903648 | Msa0436330:intron | 50.0% |
| AGATGAGCCGGATCGTGTTT+GGG | - | chr3_2:89903960-89903979 | Msa0436330:CDS | 50.0% | |
| !! | ATGGTGGTGTTGTGCTTTGC+AGG | - | chr3_2:89904026-89904045 | Msa0436330:CDS | 50.0% |
| ! | GCAGGTCTTTTAGGCCTGTT+TGG | + | chr3_2:89904432-89904451 | None:intergenic | 50.0% |
| AGTATACTGGAGGAACGTCC+AGG | - | chr3_2:89904583-89904602 | Msa0436330:intron | 50.0% | |
| AGCATGTTTCCTCCAACTCC+TGG | + | chr3_2:89904604-89904623 | None:intergenic | 50.0% | |
| TGCCTCCCCAGCTATGATGT+TGG | + | chr3_2:89902560-89902579 | None:intergenic | 55.0% | |
| CAGATGAGCCGGATCGTGTT+TGG | - | chr3_2:89903959-89903978 | Msa0436330:CDS | 55.0% | |
| GATGAGCCGGATCGTGTTTG+GGG | - | chr3_2:89903961-89903980 | Msa0436330:CDS | 55.0% | |
| TGGACACCCCAAACACGATC+CGG | + | chr3_2:89903970-89903989 | None:intergenic | 55.0% | |
| CGGGATCTCGGCAACTACGT+CGG | + | chr3_2:89902476-89902495 | None:intergenic | 60.0% | |
| CTGGAGGAACGTCCAGGAGT+TGG | - | chr3_2:89904589-89904608 | Msa0436330:intron | 60.0% | |
| GAGGAACGTCCAGGAGTTGG+AGG | - | chr3_2:89904592-89904611 | Msa0436330:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 89902410 | 89905031 | 89902410 | ID=Msa0436330;Name=Msa0436330 |
| chr3_2 | mRNA | 89902410 | 89905031 | 89902410 | ID=Msa0436330-mRNA-1;Parent=Msa0436330;Name=Msa0436330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=59|1|1|1|1|1|7|141|475 |
| chr3_2 | exon | 89902410 | 89902679 | 89902410 | ID=Msa0436330-mRNA-1:exon:26736;Parent=Msa0436330-mRNA-1 |
| chr3_2 | exon | 89902790 | 89902874 | 89902790 | ID=Msa0436330-mRNA-1:exon:26735;Parent=Msa0436330-mRNA-1 |
| chr3_2 | exon | 89902969 | 89903240 | 89902969 | ID=Msa0436330-mRNA-1:exon:26734;Parent=Msa0436330-mRNA-1 |
| chr3_2 | exon | 89903328 | 89903393 | 89903328 | ID=Msa0436330-mRNA-1:exon:26733;Parent=Msa0436330-mRNA-1 |
| chr3_2 | exon | 89903791 | 89904168 | 89903791 | ID=Msa0436330-mRNA-1:exon:26732;Parent=Msa0436330-mRNA-1 |
| chr3_2 | exon | 89904289 | 89904408 | 89904289 | ID=Msa0436330-mRNA-1:exon:26731;Parent=Msa0436330-mRNA-1 |
| chr3_2 | exon | 89904595 | 89905031 | 89904595 | ID=Msa0436330-mRNA-1:exon:26730;Parent=Msa0436330-mRNA-1 |
| chr3_2 | five_prime_UTR | 89904973 | 89905031 | 89904973 | ID=Msa0436330-mRNA-1:five_prime_utr;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89904595 | 89904972 | 89904595 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89904289 | 89904408 | 89904289 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89903791 | 89904168 | 89903791 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89903328 | 89903393 | 89903328 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89902969 | 89903240 | 89902969 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89902790 | 89902874 | 89902790 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | CDS | 89902551 | 89902679 | 89902551 | ID=Msa0436330-mRNA-1:cds;Parent=Msa0436330-mRNA-1 |
| chr3_2 | three_prime_UTR | 89902410 | 89902550 | 89902410 | ID=Msa0436330-mRNA-1:three_prime_utr;Parent=Msa0436330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
