AlfalfaGEDB | Msa0181650

M. sativa cultivar zhongmu-4 / Msa0181650

KEGG: K01534
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0181650	A0A396JW40	97.059	272	8	0	1	272	1	272	0.0	541

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016040	Msa0181650	0.800532	1.379001e-48	-8.615850e-47
Msa0038940	Msa0181650	0.982188	1.877698e-154	-8.615850e-47
Msa0042640	Msa0181650	0.809380	1.947611e-50	-8.615850e-47
Msa0048510	Msa0181650	0.852910	3.385403e-61	-8.615850e-47
Msa0062340	Msa0181650	0.815559	8.688436e-52	-8.615850e-47
Msa0065020	Msa0181650	0.810926	9.042209e-51	-8.615850e-47
Msa0074360	Msa0181650	0.847109	1.423510e-59	-8.615850e-47
Msa0075530	Msa0181650	0.826013	3.424950e-54	-8.615850e-47
Msa0077340	Msa0181650	0.831718	1.423953e-55	-8.615850e-47
Msa0077560	Msa0181650	0.886676	2.780883e-72	-8.615850e-47
Msa0094780	Msa0181650	0.845576	3.725200e-59	-8.615850e-47
Msa0094790	Msa0181650	0.817006	4.124937e-52	-8.615850e-47
Msa0122330	Msa0181650	0.826919	2.082462e-54	-8.615850e-47
Msa0123070	Msa0181650	0.807156	5.801519e-50	-8.615850e-47
Msa0125360	Msa0181650	0.826896	2.109077e-54	-8.615850e-47
Msa0133150	Msa0181650	0.827584	1.442828e-54	-8.615850e-47
Msa0133280	Msa0181650	0.826296	2.932731e-54	-8.615850e-47
Msa0140280	Msa0181650	0.805395	1.362595e-49	-8.615850e-47
Msa0143670	Msa0181650	0.801201	1.007016e-48	-8.615850e-47
Msa0159590	Msa0181650	0.818488	1.909758e-52	-8.615850e-47
Msa0168050	Msa0181650	0.825760	3.931688e-54	-8.615850e-47
Msa0181650	Msa0185290	0.811653	6.285942e-51	-8.615850e-47
Msa0181650	Msa0190570	0.802716	4.917353e-49	-8.615850e-47
Msa0181650	Msa0190730	0.863862	1.838337e-64	-8.615850e-47
Msa0181650	Msa0204950	0.845566	3.749452e-59	-8.615850e-47
Msa0181650	Msa0213030	0.823901	1.079234e-53	-8.615850e-47
Msa0181650	Msa0225480	0.821797	3.334503e-53	-8.615850e-47
Msa0181650	Msa0225610	0.818699	1.710096e-52	-8.615850e-47
Msa0181650	Msa0225860	0.803679	3.106342e-49	-8.615850e-47
Msa0181650	Msa0232760	0.818534	1.864215e-52	-8.615850e-47
Msa0181650	Msa0233020	0.829452	5.107784e-55	-8.615850e-47
Msa0181650	Msa0241610	0.811205	7.864108e-51	-8.615850e-47
Msa0181650	Msa0242590	0.812773	3.582124e-51	-8.615850e-47
Msa0181650	Msa0249850	0.850583	1.546343e-60	-8.615850e-47
Msa0181650	Msa0260510	0.819146	1.353653e-52	-8.615850e-47
Msa0181650	Msa0269210	0.880840	3.939289e-70	-8.615850e-47
Msa0181650	Msa0271880	0.804407	2.192176e-49	-8.615850e-47
Msa0181650	Msa0272260	0.825634	4.211569e-54	-8.615850e-47
Msa0181650	Msa0274320	0.804683	1.920455e-49	-8.615850e-47
Msa0181650	Msa0280790	0.809257	2.068667e-50	-8.615850e-47
Msa0181650	Msa0281470	0.832179	1.095876e-55	-8.615850e-47
Msa0181650	Msa0298470	0.824044	9.987911e-54	-8.615850e-47
Msa0181650	Msa0298580	0.802949	4.400429e-49	-8.615850e-47
Msa0181650	Msa0301820	0.816436	5.535299e-52	-8.615850e-47
Msa0181650	Msa0307270	0.838292	3.136373e-57	-8.615850e-47
Msa0181650	Msa0320600	0.845852	3.135782e-59	-8.615850e-47
Msa0181650	Msa0340500	0.820207	7.748955e-53	-8.615850e-47
Msa0181650	Msa0343010	0.837896	3.964433e-57	-8.615850e-47
Msa0181650	Msa0361910	0.819244	1.285965e-52	-8.615850e-47
Msa0181650	Msa0367150	0.824492	7.838406e-54	-8.615850e-47
Msa0181650	Msa0367520	0.841217	5.432578e-58	-8.615850e-47
Msa0181650	Msa0371270	0.812270	4.612714e-51	-8.615850e-47
Msa0181650	Msa0373500	0.864163	1.481693e-64	-8.615850e-47
Msa0181650	Msa0377710	0.852119	5.688962e-61	-8.615850e-47
Msa0181650	Msa0379470	0.813972	1.952744e-51	-8.615850e-47
Msa0181650	Msa0380490	0.837068	6.464478e-57	-8.615850e-47
Msa0181650	Msa0380670	0.805560	1.258396e-49	-8.615850e-47
Msa0181650	Msa0390970	0.805677	1.189387e-49	-8.615850e-47
Msa0181650	Msa0409830	0.837957	3.825936e-57	-8.615850e-47
Msa0181650	Msa0414880	0.817894	2.601825e-52	-8.615850e-47
Msa0181650	Msa0416160	0.810306	1.231095e-50	-8.615850e-47
Msa0181650	Msa0419540	0.828293	9.742291e-55	-8.615850e-47
Msa0181650	Msa0430000	0.822769	1.983666e-53	-8.615850e-47
Msa0181650	Msa0432010	0.860428	2.080146e-63	-8.615850e-47
Msa0181650	Msa0436330	0.847984	8.180486e-60	-8.615850e-47
Msa0181650	Msa0454560	0.840801	6.987249e-58	-8.615850e-47
Msa0181650	Msa0459740	0.855520	5.970160e-62	-8.615850e-47
Msa0181650	Msa0462780	0.820708	5.947444e-53	-8.615850e-47
Msa0181650	Msa0465530	0.820448	6.821340e-53	-8.615850e-47
Msa0181650	Msa0468620	0.832159	1.108244e-55	-8.615850e-47
Msa0181650	Msa0481890	0.900986	4.225075e-78	-8.615850e-47
Msa0181650	Msa0483100	0.809414	1.914428e-50	-8.615850e-47
Msa0181650	Msa0500570	0.822002	2.990269e-53	-8.615850e-47
Msa0181650	Msa0500650	0.811399	7.139780e-51	-8.615850e-47
Msa0181650	Msa0502510	0.860022	2.759196e-63	-8.615850e-47
Msa0181650	Msa0511470	0.817269	3.599383e-52	-8.615850e-47
Msa0181650	Msa0514500	0.833240	5.975756e-56	-8.615850e-47
Msa0181650	Msa0520870	0.812265	4.625774e-51	-8.615850e-47
Msa0181650	Msa0529030	0.823348	1.453637e-53	-8.615850e-47
Msa0181650	Msa0531960	0.814217	1.723599e-51	-8.615850e-47
Msa0181650	Msa0534720	0.828597	8.230789e-55	-8.615850e-47
Msa0181650	Msa0545920	0.821007	5.076291e-53	-8.615850e-47
Msa0181650	Msa0556440	0.833592	4.881189e-56	-8.615850e-47
Msa0181650	Msa0567170	0.825406	4.770588e-54	-8.615850e-47
Msa0181650	Msa0574900	0.826783	2.244086e-54	-8.615850e-47
Msa0181650	Msa0577280	0.805350	1.392994e-49	-8.615850e-47
Msa0181650	Msa0577330	0.801737	7.819464e-49	-8.615850e-47
Msa0181650	Msa0580370	0.828541	8.487621e-55	-8.615850e-47
Msa0181650	Msa0580810	0.810720	1.001938e-50	-8.615850e-47
Msa0181650	Msa0590200	0.804595	2.003149e-49	-8.615850e-47
Msa0181650	Msa0601720	0.826829	2.188030e-54	-8.615850e-47
Msa0181650	Msa0607800	0.843788	1.129454e-58	-8.615850e-47
Msa0181650	Msa0611790	0.801099	1.056432e-48	-8.615850e-47
Msa0181650	Msa0621710	0.842497	2.494430e-58	-8.615850e-47
Msa0181650	Msa0624900	0.835060	2.090387e-56	-8.615850e-47
Msa0181650	Msa0641990	0.839614	1.426095e-57	-8.615850e-47
Msa0181650	Msa0648040	0.830521	2.803036e-55	-8.615850e-47
Msa0181650	Msa0652000	0.824380	8.329291e-54	-8.615850e-47
Msa0181650	Msa0658640	0.833981	3.901239e-56	-8.615850e-47
Msa0181650	Msa0666700	0.820917	5.323986e-53	-8.615850e-47
Msa0181650	Msa0681050	0.827101	1.884186e-54	-8.615850e-47
Msa0181650	Msa0683490	0.812338	4.457558e-51	-8.615850e-47
Msa0181650	Msa0690740	0.816648	4.963600e-52	-8.615850e-47
Msa0181650	Msa0694500	0.843928	1.036117e-58	-8.615850e-47
Msa0181650	Msa0702810	0.810175	1.313267e-50	-8.615850e-47
Msa0181650	Msa0703600	0.840458	8.590030e-58	-8.615850e-47
Msa0181650	Msa0709200	0.839375	1.645517e-57	-8.615850e-47
Msa0181650	Msa0709440	0.901333	2.979095e-78	-8.615850e-47
Msa0181650	Msa0709630	0.835987	1.218148e-56	-8.615850e-47
Msa0181650	Msa0714520	0.809940	1.475907e-50	-8.615850e-47
Msa0181650	Msa0714790	0.839652	1.393646e-57	-8.615850e-47
Msa0181650	Msa0716890	0.866148	3.523169e-65	-8.615850e-47
Msa0181650	Msa0721080	0.805276	1.443276e-49	-8.615850e-47
Msa0181650	Msa0722220	0.804854	1.768687e-49	-8.615850e-47
Msa0181650	Msa0735780	0.842377	2.683459e-58	-8.615850e-47
Msa0181650	Msa0743440	0.827938	1.186168e-54	-8.615850e-47
Msa0181650	Msa0745720	0.834461	2.958349e-56	-8.615850e-47
Msa0181650	Msa0754430	0.874799	5.092108e-68	-8.615850e-47
Msa0181650	Msa0754450	0.880168	6.854846e-70	-8.615850e-47
Msa0181650	Msa0755760	0.836093	1.145048e-56	-8.615850e-47
Msa0181650	Msa0756820	0.822683	2.078154e-53	-8.615850e-47
Msa0181650	Msa0758030	0.830020	3.715216e-55	-8.615850e-47
Msa0181650	Msa0758650	0.832284	1.031809e-55	-8.615850e-47
Msa0181650	Msa0763550	0.803391	3.565334e-49	-8.615850e-47
Msa0181650	Msa0773630	0.836381	9.677200e-57	-8.615850e-47
Msa0181650	Msa0777750	0.803912	2.779394e-49	-8.615850e-47
Msa0181650	Msa0780910	0.830440	2.933756e-55	-8.615850e-47
Msa0181650	Msa0787590	0.804718	1.888091e-49	-8.615850e-47
Msa0181650	Msa0795870	0.835690	1.449318e-56	-8.615850e-47
Msa0181650	Msa0804000	0.850959	1.212030e-60	-8.615850e-47
Msa0181650	Msa0805680	0.825269	5.139751e-54	-8.615850e-47
Msa0181650	Msa0811020	0.812767	3.591816e-51	-8.615850e-47
Msa0181650	Msa0818880	0.822312	2.533628e-53	-8.615850e-47
Msa0181650	Msa0821160	0.818057	2.390431e-52	-8.615850e-47
Msa0181650	Msa0824450	0.832019	1.200365e-55	-8.615850e-47
Msa0181650	Msa0828970	0.817495	3.200899e-52	-8.615850e-47
Msa0181650	Msa0833650	0.830865	2.308810e-55	-8.615850e-47
Msa0181650	Msa0835900	0.822355	2.476478e-53	-8.615850e-47
Msa0181650	Msa0837710	0.830168	3.418360e-55	-8.615850e-47
Msa0181650	Msa0842070	0.845159	4.831075e-59	-8.615850e-47
Msa0181650	Msa0843050	0.817767	2.779447e-52	-8.615850e-47
Msa0181650	Msa0855230	0.821042	4.981944e-53	-8.615850e-47
Msa0181650	Msa0863620	0.847326	1.241512e-59	-8.615850e-47
Msa0181650	Msa0867110	0.838049	3.622224e-57	-8.615850e-47
Msa0181650	Msa0878280	0.834260	3.322573e-56	-8.615850e-47
Msa0181650	Msa0879920	0.808646	2.795696e-50	-8.615850e-47
Msa0181650	Msa0888790	0.816436	5.536360e-52	-8.615850e-47
Msa0181650	Msa0931590	0.837396	5.329367e-57	-8.615850e-47
Msa0181650	Msa0966480	0.801711	7.913658e-49	-8.615850e-47
Msa0181650	Msa0980290	0.803053	4.188618e-49	-8.615850e-47
Msa0181650	Msa0997920	0.805608	1.229501e-49	-8.615850e-47
Msa0181650	Msa1001740	0.805688	1.182954e-49	-8.615850e-47
Msa0181650	Msa1034400	0.802181	6.337520e-49	-8.615850e-47
Msa0181650	Msa1035610	0.811565	6.569422e-51	-8.615850e-47
Msa0181650	Msa1037540	0.845639	3.581737e-59	-8.615850e-47
Msa0181650	Msa1042880	0.828376	9.306343e-55	-8.615850e-47
Msa0181650	Msa1059020	0.800849	1.188225e-48	-8.615850e-47
Msa0181650	Msa1072940	0.836158	1.102190e-56	-8.615850e-47
Msa0181650	Msa1074900	0.821307	4.327596e-53	-8.615850e-47
Msa0181650	Msa1084530	0.900709	5.586079e-78	-8.615850e-47
Msa0181650	Msa1114630	0.832562	8.806692e-56	-8.615850e-47
Msa0181650	Msa1125820	0.895610	8.135055e-76	-8.615850e-47
Msa0181650	Msa1125990	0.893949	3.902856e-75	-8.615850e-47
Msa0181650	Msa1127470	0.847362	1.213333e-59	-8.615850e-47
Msa0181650	Msa1130420	0.823900	1.079894e-53	-8.615850e-47
Msa0181650	Msa1132530	0.837347	5.484646e-57	-8.615850e-47
Msa0181650	Msa1132840	0.830288	3.195562e-55	-8.615850e-47
Msa0181650	Msa1159590	0.827461	1.544615e-54	-8.615850e-47
Msa0181650	Msa1160920	0.840654	7.635071e-58	-8.615850e-47
Msa0181650	Msa1162230	0.805478	1.309470e-49	-8.615850e-47
Msa0181650	Msa1165090	0.808844	2.536835e-50	-8.615850e-47
Msa0181650	Msa1171290	0.906516	1.365269e-80	-8.615850e-47
Msa0181650	Msa1192560	0.811278	7.583200e-51	-8.615850e-47
Msa0181650	Msa1192570	0.864865	8.940674e-65	-8.615850e-47
Msa0181650	Msa1192590	0.805389	1.366632e-49	-8.615850e-47
Msa0181650	Msa1201540	0.813845	2.082798e-51	-8.615850e-47
Msa0181650	Msa1201780	0.810523	1.104676e-50	-8.615850e-47
Msa0181650	Msa1208950	0.831328	1.776334e-55	-8.615850e-47
Msa0181650	Msa1214350	0.804889	1.739311e-49	-8.615850e-47
Msa0181650	Msa1215870	0.836620	8.410345e-57	-8.615850e-47
Msa0181650	Msa1218820	0.850130	2.071558e-60	-8.615850e-47
Msa0181650	Msa1226520	0.830338	3.107170e-55	-8.615850e-47
Msa0181650	Msa1240260	0.804296	2.312559e-49	-8.615850e-47
Msa0181650	Msa1254240	0.804764	1.846984e-49	-8.615850e-47
Msa0181650	Msa1254540	0.828215	1.017580e-54	-8.615850e-47
Msa0181650	Msa1263740	0.805275	1.444382e-49	-8.615850e-47
Msa0181650	Msa1263780	0.826506	2.613388e-54	-8.615850e-47
Msa0181650	Msa1294460	0.803026	4.242154e-49	-8.615850e-47
Msa0181650	Msa1301700	0.801272	9.736708e-49	-8.615850e-47
Msa0181650	Msa1307630	0.830237	3.288478e-55	-8.615850e-47
Msa0181650	Msa1325490	0.811605	6.438225e-51	-8.615850e-47
Msa0181650	Msa1332950	0.826852	2.160367e-54	-8.615850e-47
Msa0181650	Msa1343170	0.811193	7.912587e-51	-8.615850e-47
Msa0181650	Msa1359690	0.805571	1.251780e-49	-8.615850e-47
Msa0181650	Msa1362130	0.847287	1.272041e-59	-8.615850e-47
Msa0181650	Msa1365500	0.814204	1.735810e-51	-8.615850e-47
Msa0181650	Msa1366150	0.879777	9.442798e-70	-8.615850e-47
Msa0181650	Msa1367180	0.801046	1.083284e-48	-8.615850e-47
Msa0181650	Msa1368750	0.864353	1.292798e-64	-8.615850e-47
Msa0181650	Msa1374790	0.859317	4.497509e-63	-8.615850e-47
Msa0181650	Msa1381180	0.800359	1.495400e-48	-8.615850e-47
Msa0181650	Msa1384150	0.863521	2.346583e-64	-8.615850e-47
Msa0181650	Msa1387440	0.874816	5.024657e-68	-8.615850e-47
Msa0181650	Msa1391500	0.805365	1.382580e-49	-8.615850e-47
Msa0181650	Msa1397270	0.819111	1.378388e-52	-8.615850e-47
Msa0181650	Msa1397400	0.807469	4.978513e-50	-8.615850e-47
Msa0181650	Msa1398810	0.806840	6.766135e-50	-8.615850e-47
Msa0181650	Msa1405460	0.826750	2.286151e-54	-8.615850e-47
Msa0181650	Msa1420950	0.826364	2.825131e-54	-8.615850e-47
Msa0181650	Msa1429070	0.870885	1.040706e-66	-8.615850e-47
Msa0181650	Msa1445120	0.840023	1.116189e-57	-8.615850e-47
Msa0181650	Msa1446100	0.830446	2.923938e-55	-8.615850e-47
Msa0181650	Msa1451820	0.861230	1.187272e-63	-8.615850e-47
Msa0181650	Msa1454010	0.804454	2.143148e-49	-8.615850e-47
Msa0181650	Msa1459010	0.804761	1.850017e-49	-8.615850e-47
Msa0181650	Msa1465360	0.807105	5.945536e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0181650	MtrunA17_Chr1g0202751	97.059	272	8	0	1	272	1	272	0.0	541

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 68 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGCACTCATTCACATAATT+TGG	0.078016	1_4:-69898359	None:intergenic
GATAATATTGCTTAGAATAT+TGG	0.195303	1_4:+69898211	Msa0181650:three_prime_UTR
TCAACAATATTATCAGTTAA+AGG	0.201695	1_4:-69898317	None:intergenic
TAACATGATCAATGACATTT+TGG	0.223671	1_4:-69897016	None:intergenic
CAATTATTACTGTATTCTTT+TGG	0.246495	1_4:+69898125	Msa0181650:three_prime_UTR
ATTGAAATCCTTGAAAATTC+TGG	0.276980	1_4:-69897974	None:intergenic
AACAATAGTGGGGTTGTTCT+TGG	0.286826	1_4:-69897316	None:intergenic
CCTATGATTGCAATTATTGC+TGG	0.293251	1_4:+69898412	Msa0181650:three_prime_UTR
TCTGGACTCTTGCAGCATAC+TGG	0.312031	1_4:-69897956	None:intergenic
TCAGTCTGATGATGCATTCC+TGG	0.314010	1_4:+69897871	Msa0181650:intron
AATGTCATTGATCATGTTAA+TGG	0.315572	1_4:+69897020	Msa0181650:CDS
CAGGCATCTCCTTCAATTCC+AGG	0.329164	1_4:-69897889	None:intergenic
TAGCTACTTTAACCGCAAAA+TGG	0.345953	1_4:+69896965	Msa0181650:exon
TGTGTACTTCATATTGTTGC+AGG	0.348192	1_4:-69898070	None:intergenic
GCAGATGGAGACGGCATATC+AGG	0.349775	1_4:-69897920	None:intergenic
TTGCAGGAAAGATGAAATCT+AGG	0.354095	1_4:+69897163	Msa0181650:CDS
TTTCCATCTACTATATCAAT+AGG	0.355572	1_4:-69897231	None:intergenic
TTCTTGGACTTGAGTAGATT+TGG	0.362992	1_4:-69897300	None:intergenic
CGCTCTTCGGCGATTGCATC+AGG	0.383202	1_4:-69897537	None:intergenic
GGCATATCAGGCAACTCTTC+AGG	0.388449	1_4:-69897908	None:intergenic
GTGAAATTGCAATCGAAAGC+TGG	0.396566	1_4:-69898007	None:intergenic
TTTAATTGTGCTACCATTGA+AGG	0.397307	1_4:-69897259	None:intergenic
AGCACTCATTCACATAATTT+GGG	0.398276	1_4:-69898358	None:intergenic
ATCCTTATGTAGAACAATAG+TGG	0.407861	1_4:-69897328	None:intergenic
CTGGACTCTTGCAGCATACT+GGG	0.413396	1_4:-69897955	None:intergenic
AAGCCTATTGATATAGTAGA+TGG	0.426272	1_4:+69897228	Msa0181650:CDS
TCCTTATGTAGAACAATAGT+GGG	0.435174	1_4:-69897327	None:intergenic
GCTTCTAAGAAGTCAAATAC+TGG	0.435698	1_4:+69897411	Msa0181650:CDS
CCAGCAATAATTGCAATCAT+AGG	0.437264	1_4:-69898412	None:intergenic
ATCAATAGGCTTCACTGCAT+TGG	0.447906	1_4:-69897217	None:intergenic
CTTGAAATCAACAAAAGAAC+TGG	0.448659	1_4:+69897381	Msa0181650:CDS
ATTATGAAACATCCGCTCTT+CGG	0.450015	1_4:-69897550	None:intergenic
CCCCACTATTGTTCTACATA+AGG	0.466740	1_4:+69897326	Msa0181650:CDS
ACCTTCAGTTTGCTAAAAGC+AGG	0.486566	1_4:-69897775	None:intergenic
AACTGATAATATTGTTGAGA+AGG	0.486615	1_4:+69898322	Msa0181650:three_prime_UTR
TGATGCATTCCTGGAATTGA+AGG	0.486995	1_4:+69897880	Msa0181650:CDS
AAAATCACAAAGTCATGCAT+TGG	0.496042	1_4:+69897587	Msa0181650:CDS
TATTGTTCTACATAAGGATA+AGG	0.500681	1_4:+69897332	Msa0181650:CDS
ATATTATCAGTTAAAGGTAA+TGG	0.505834	1_4:-69898311	None:intergenic
GATGGAAAGAAGGCCTTCAA+TGG	0.509301	1_4:+69897246	Msa0181650:CDS
CACAAAATACTATCAAGAAA+AGG	0.510043	1_4:-69898384	None:intergenic
TGCAGGAAAGATGAAATCTA+GGG	0.516990	1_4:+69897164	Msa0181650:CDS
AATATCTAAAACAAACAGTA+AGG	0.520906	1_4:-69898451	None:intergenic
TTTGGTGTTTGATTGACAGA+GGG	0.545419	1_4:-69897282	None:intergenic
TAAGGAAGTTGTTTCTGCCA+AGG	0.545987	1_4:+69897350	Msa0181650:CDS
TGAAATTGCAATCGAAAGCT+GGG	0.549449	1_4:-69898006	None:intergenic
AGAAGTCAAATACTGGCAGC+AGG	0.552216	1_4:+69897418	Msa0181650:CDS
TGATATAGTAGATGGAAAGA+AGG	0.559608	1_4:+69897236	Msa0181650:CDS
CTTTAAAAGAACTAGTGTCC+AGG	0.560073	1_4:-69897500	None:intergenic
TTTCAAGACTGCTATACTTG+GGG	0.563438	1_4:+69897623	Msa0181650:CDS
AAGGAAGTTGTTTCTGCCAA+GGG	0.563895	1_4:+69897351	Msa0181650:CDS
ATTTGGTGTTTGATTGACAG+AGG	0.569171	1_4:-69897283	None:intergenic
GGAAAGATGAAATCTAGGGC+TGG	0.572546	1_4:+69897168	Msa0181650:CDS
GGGGAACCATGCTTAGCAGA+TGG	0.575621	1_4:-69897935	None:intergenic
CCGTCTCCATCTGCTAAGCA+TGG	0.588140	1_4:+69897929	Msa0181650:CDS
AAGACTGCTATACTTGGGGA+TGG	0.598286	1_4:+69897627	Msa0181650:CDS
CTGATGCAATCGCCGAAGAG+CGG	0.620812	1_4:+69897538	Msa0181650:CDS
AATAATTGCCATCACAAGAG+TGG	0.626500	1_4:-69898110	None:intergenic
AATAATTGCAATCATAGGAG+TGG	0.634076	1_4:-69898407	None:intergenic
CCATGCTTAGCAGATGGAGA+CGG	0.635945	1_4:-69897929	None:intergenic
AATAGATGCCAACACAAGAG+TGG	0.651321	1_4:-69898256	None:intergenic
AAGATGAAATCTAGGGCTGG+AGG	0.656807	1_4:+69897171	Msa0181650:CDS
ATATTGTGCCACTCTTGTGA+TGG	0.665318	1_4:+69898102	Msa0181650:three_prime_UTR
TGGACTCTTGCAGCATACTG+GGG	0.672423	1_4:-69897954	None:intergenic
GCTGGAGGAAGAAAACCACT+TGG	0.686170	1_4:+69897186	Msa0181650:CDS
TTAAAGGTAATGGCTAAACA+AGG	0.692527	1_4:-69898301	None:intergenic
CCTTATGTAGAACAATAGTG+GGG	0.709845	1_4:-69897326	None:intergenic
GCATTGGATAGATCACCAAG+TGG	0.747744	1_4:-69897201	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATCATATATTGTAAAA+GGG	-	chr1_4:69896487-69896506	None:intergenic	10.0%
!!	AAAAATCATATATTGTAAAA+GGG	-	chr1_4:69896487-69896506	None:intergenic	10.0%
!!!	AAAGAAATGTATTGATTTTT+GGG	+	chr1_4:69896309-69896328	Msa0181650:intron	15.0%
!!	CAAAAATCATATATTGTAAA+AGG	-	chr1_4:69896488-69896507	None:intergenic	15.0%
!!!	AAAGAAATGTATTGATTTTT+GGG	+	chr1_4:69896309-69896328	Msa0181650:intron	15.0%
!!	CAAAAATCATATATTGTAAA+AGG	-	chr1_4:69896488-69896507	None:intergenic	15.0%
!!	ATTCTTTCTTTAATGTTGAT+TGG	+	chr1_4:69896191-69896210	Msa0181650:intron	20.0%
!!!	CAAAGAAATGTATTGATTTT+TGG	+	chr1_4:69896308-69896327	Msa0181650:intron	20.0%
!!!	TATGATTTTTGTGTTTACAT+TGG	+	chr1_4:69896372-69896391	Msa0181650:intron	20.0%
!!!	AAATCGTAAGTTTTCTTTTT+GGG	+	chr1_4:69896540-69896559	Msa0181650:intron	20.0%
!!	AATAGTTGAAAAATCAAAAC+AGG	-	chr1_4:69897839-69897858	None:intergenic	20.0%
!!!	GTTTTGATTTTTCAACTATT+TGG	+	chr1_4:69897839-69897858	Msa0181650:intron	20.0%
!!!	CAATTATTACTGTATTCTTT+TGG	+	chr1_4:69898125-69898144	Msa0181650:three_prime_UTR	20.0%
!!	GATAATATTGCTTAGAATAT+TGG	+	chr1_4:69898211-69898230	Msa0181650:three_prime_UTR	20.0%
!!!	ATCTATTGCTGTATTTTTTT+GGG	+	chr1_4:69898272-69898291	Msa0181650:three_prime_UTR	20.0%
!!	ATATTATCAGTTAAAGGTAA+TGG	-	chr1_4:69898314-69898333	None:intergenic	20.0%
!!	TCAACAATATTATCAGTTAA+AGG	-	chr1_4:69898320-69898339	None:intergenic	20.0%
!!!	AATATCTAAAACAAACAGTA+AGG	-	chr1_4:69898454-69898473	None:intergenic	20.0%
!!	ATTCTTTCTTTAATGTTGAT+TGG	+	chr1_4:69896191-69896210	Msa0181650:intron	20.0%
!!!	CAAAGAAATGTATTGATTTT+TGG	+	chr1_4:69896308-69896327	Msa0181650:intron	20.0%
!!!	TATGATTTTTGTGTTTACAT+TGG	+	chr1_4:69896372-69896391	Msa0181650:intron	20.0%
!!!	AAATCGTAAGTTTTCTTTTT+GGG	+	chr1_4:69896540-69896559	Msa0181650:intron	20.0%
!!	AATAGTTGAAAAATCAAAAC+AGG	-	chr1_4:69897839-69897858	None:intergenic	20.0%
!!!	GTTTTGATTTTTCAACTATT+TGG	+	chr1_4:69897839-69897858	Msa0181650:intron	20.0%
!!!	CAATTATTACTGTATTCTTT+TGG	+	chr1_4:69898125-69898144	Msa0181650:three_prime_UTR	20.0%
!!	GATAATATTGCTTAGAATAT+TGG	+	chr1_4:69898211-69898230	Msa0181650:three_prime_UTR	20.0%
!!!	ATCTATTGCTGTATTTTTTT+GGG	+	chr1_4:69898272-69898291	Msa0181650:three_prime_UTR	20.0%
!!	ATATTATCAGTTAAAGGTAA+TGG	-	chr1_4:69898314-69898333	None:intergenic	20.0%
!!	TCAACAATATTATCAGTTAA+AGG	-	chr1_4:69898320-69898339	None:intergenic	20.0%
!!!	AATATCTAAAACAAACAGTA+AGG	-	chr1_4:69898454-69898473	None:intergenic	20.0%
!!	TTTCTTTAATGTTGATTGGT+AGG	+	chr1_4:69896195-69896214	Msa0181650:intron	25.0%
!!!	TTTACATTGGATTTTGATGA+AGG	+	chr1_4:69896385-69896404	Msa0181650:intron	25.0%
!!	GAAATCGTAAGTTTTCTTTT+TGG	+	chr1_4:69896539-69896558	Msa0181650:intron	25.0%
!!	GGTTTCAAACTTTAGATTTT+GGG	+	chr1_4:69896561-69896580	Msa0181650:intron	25.0%
!!	TATGTGAAAGATTTCTAAGA+TGG	+	chr1_4:69896901-69896920	Msa0181650:intron	25.0%
!!	TAACATGATCAATGACATTT+TGG	-	chr1_4:69897019-69897038	None:intergenic	25.0%
!	AATGTCATTGATCATGTTAA+TGG	+	chr1_4:69897020-69897039	Msa0181650:CDS	25.0%
!!	TCATGTTAATGGTATTTTTC+TGG	+	chr1_4:69897031-69897050	Msa0181650:intron	25.0%
!	AATTGTTTATGTGTGTAGAA+TGG	+	chr1_4:69897083-69897102	Msa0181650:intron	25.0%
!	TTTCCATCTACTATATCAAT+AGG	-	chr1_4:69897234-69897253	None:intergenic	25.0%
!	TATTGTTCTACATAAGGATA+AGG	+	chr1_4:69897332-69897351	Msa0181650:CDS	25.0%
!	TGTACCTGATATGAAAAATA+AGG	+	chr1_4:69897473-69897492	Msa0181650:CDS	25.0%
!!	AGATTCTGTTATGGTAATTT+TGG	+	chr1_4:69897672-69897691	Msa0181650:intron	25.0%
!	ATACATAACTTGATCAGATT+TGG	+	chr1_4:69897723-69897742	Msa0181650:intron	25.0%
!	ATTGAAATCCTTGAAAATTC+TGG	-	chr1_4:69897977-69897996	None:intergenic	25.0%
!!!	AATTTTCAAGGATTTCAATG+TGG	+	chr1_4:69897978-69897997	Msa0181650:CDS	25.0%
!!!	ATTTTCAAGGATTTCAATGT+GGG	+	chr1_4:69897979-69897998	Msa0181650:CDS	25.0%
!!!	AATCAGTTTTTAGACGATTT+GGG	-	chr1_4:69898046-69898065	None:intergenic	25.0%
!!!	CATCTATTGCTGTATTTTTT+TGG	+	chr1_4:69898271-69898290	Msa0181650:three_prime_UTR	25.0%
!	AACTGATAATATTGTTGAGA+AGG	+	chr1_4:69898322-69898341	Msa0181650:three_prime_UTR	25.0%
!	CACAAAATACTATCAAGAAA+AGG	-	chr1_4:69898387-69898406	None:intergenic	25.0%
!!	TTTCTTTAATGTTGATTGGT+AGG	+	chr1_4:69896195-69896214	Msa0181650:intron	25.0%
!!!	TTTACATTGGATTTTGATGA+AGG	+	chr1_4:69896385-69896404	Msa0181650:intron	25.0%
!!	GAAATCGTAAGTTTTCTTTT+TGG	+	chr1_4:69896539-69896558	Msa0181650:intron	25.0%
!!	GGTTTCAAACTTTAGATTTT+GGG	+	chr1_4:69896561-69896580	Msa0181650:intron	25.0%
!!	TATGTGAAAGATTTCTAAGA+TGG	+	chr1_4:69896901-69896920	Msa0181650:intron	25.0%
!!	TAACATGATCAATGACATTT+TGG	-	chr1_4:69897019-69897038	None:intergenic	25.0%
!	AATGTCATTGATCATGTTAA+TGG	+	chr1_4:69897020-69897039	Msa0181650:CDS	25.0%
!!	TCATGTTAATGGTATTTTTC+TGG	+	chr1_4:69897031-69897050	Msa0181650:intron	25.0%
!	AATTGTTTATGTGTGTAGAA+TGG	+	chr1_4:69897083-69897102	Msa0181650:intron	25.0%
!	TTTCCATCTACTATATCAAT+AGG	-	chr1_4:69897234-69897253	None:intergenic	25.0%
!	TATTGTTCTACATAAGGATA+AGG	+	chr1_4:69897332-69897351	Msa0181650:CDS	25.0%
!	TGTACCTGATATGAAAAATA+AGG	+	chr1_4:69897473-69897492	Msa0181650:CDS	25.0%
!!	AGATTCTGTTATGGTAATTT+TGG	+	chr1_4:69897672-69897691	Msa0181650:intron	25.0%
!	ATACATAACTTGATCAGATT+TGG	+	chr1_4:69897723-69897742	Msa0181650:intron	25.0%
!	ATTGAAATCCTTGAAAATTC+TGG	-	chr1_4:69897977-69897996	None:intergenic	25.0%
!!!	AATTTTCAAGGATTTCAATG+TGG	+	chr1_4:69897978-69897997	Msa0181650:CDS	25.0%
!!!	ATTTTCAAGGATTTCAATGT+GGG	+	chr1_4:69897979-69897998	Msa0181650:CDS	25.0%
!!!	AATCAGTTTTTAGACGATTT+GGG	-	chr1_4:69898046-69898065	None:intergenic	25.0%
!!!	CATCTATTGCTGTATTTTTT+TGG	+	chr1_4:69898271-69898290	Msa0181650:three_prime_UTR	25.0%
!	AACTGATAATATTGTTGAGA+AGG	+	chr1_4:69898322-69898341	Msa0181650:three_prime_UTR	25.0%
!	CACAAAATACTATCAAGAAA+AGG	-	chr1_4:69898387-69898406	None:intergenic	25.0%
!	GTTTACATTCAAGTTAGATG+AGG	+	chr1_4:69896509-69896528	Msa0181650:intron	30.0%
!	GGGTTTCAAACTTTAGATTT+TGG	+	chr1_4:69896560-69896579	Msa0181650:intron	30.0%
!!!	AGATTTTGGGTTTCTTTTGA+TGG	+	chr1_4:69896574-69896593	Msa0181650:intron	30.0%
	TGGTTGGGAAATTTAAATGT+TGG	+	chr1_4:69896594-69896613	Msa0181650:intron	30.0%
	GGTTGGGAAATTTAAATGTT+GGG	+	chr1_4:69896595-69896614	Msa0181650:intron	30.0%
!!	GGACTTTTAATTATGCAGTA+AGG	-	chr1_4:69896701-69896720	None:intergenic	30.0%
	TGAATTCACAACAATGTTCA+TGG	-	chr1_4:69896722-69896741	None:intergenic	30.0%
!	AACCCTTTTACAATATTTGC+AGG	+	chr1_4:69896927-69896946	Msa0181650:intron	30.0%
!	ACCCTTTTACAATATTTGCA+GGG	+	chr1_4:69896928-69896947	Msa0181650:intron	30.0%
	ACCCTGCAAATATTGTAAAA+GGG	-	chr1_4:69896932-69896951	None:intergenic	30.0%
	CTACACACATAAACAATTGA+TGG	-	chr1_4:69897081-69897100	None:intergenic	30.0%
!	TCTATAAAGACAGATTTTGC+AGG	+	chr1_4:69897147-69897166	Msa0181650:CDS	30.0%
	AAGCCTATTGATATAGTAGA+TGG	+	chr1_4:69897228-69897247	Msa0181650:CDS	30.0%
	TGATATAGTAGATGGAAAGA+AGG	+	chr1_4:69897236-69897255	Msa0181650:CDS	30.0%
	TTTAATTGTGCTACCATTGA+AGG	-	chr1_4:69897262-69897281	None:intergenic	30.0%
	TCCTTATGTAGAACAATAGT+GGG	-	chr1_4:69897330-69897349	None:intergenic	30.0%
	ATCCTTATGTAGAACAATAG+TGG	-	chr1_4:69897331-69897350	None:intergenic	30.0%
!!!	GATTTCAAGATTTTTTCCCT+TGG	-	chr1_4:69897370-69897389	None:intergenic	30.0%
	CTTGAAATCAACAAAAGAAC+TGG	+	chr1_4:69897381-69897400	Msa0181650:CDS	30.0%
!!!	CTGTCCTTATTTTTCATATC+AGG	-	chr1_4:69897480-69897499	None:intergenic	30.0%
!!	TGGACACTAGTTCTTTTAAA+GGG	+	chr1_4:69897502-69897521	Msa0181650:CDS	30.0%
	AAAATCACAAAGTCATGCAT+TGG	+	chr1_4:69897587-69897606	Msa0181650:CDS	30.0%
!!!	TTTTTCAAGACTGCTATACT+TGG	+	chr1_4:69897621-69897640	Msa0181650:CDS	30.0%
!!	TTTTCAAGACTGCTATACTT+GGG	+	chr1_4:69897622-69897641	Msa0181650:CDS	30.0%
!	ACTGATTCTAGATTCTGTTA+TGG	+	chr1_4:69897663-69897682	Msa0181650:intron	30.0%
!!	GAATCAGTTTTTAGACGATT+TGG	-	chr1_4:69898047-69898066	None:intergenic	30.0%
!!	TCTTTTGGAGATGTCTTTAA+TGG	+	chr1_4:69898140-69898159	Msa0181650:three_prime_UTR	30.0%
!	TTAAAGGTAATGGCTAAACA+AGG	-	chr1_4:69898304-69898323	None:intergenic	30.0%
	AGCACTCATTCACATAATTT+GGG	-	chr1_4:69898361-69898380	None:intergenic	30.0%
	AAGCACTCATTCACATAATT+TGG	-	chr1_4:69898362-69898381	None:intergenic	30.0%
	AATAATTGCAATCATAGGAG+TGG	-	chr1_4:69898410-69898429	None:intergenic	30.0%
!	GTTTACATTCAAGTTAGATG+AGG	+	chr1_4:69896509-69896528	Msa0181650:intron	30.0%
!	GGGTTTCAAACTTTAGATTT+TGG	+	chr1_4:69896560-69896579	Msa0181650:intron	30.0%
!!!	AGATTTTGGGTTTCTTTTGA+TGG	+	chr1_4:69896574-69896593	Msa0181650:intron	30.0%
	TGGTTGGGAAATTTAAATGT+TGG	+	chr1_4:69896594-69896613	Msa0181650:intron	30.0%
	GGTTGGGAAATTTAAATGTT+GGG	+	chr1_4:69896595-69896614	Msa0181650:intron	30.0%
!!	GGACTTTTAATTATGCAGTA+AGG	-	chr1_4:69896701-69896720	None:intergenic	30.0%
	TGAATTCACAACAATGTTCA+TGG	-	chr1_4:69896722-69896741	None:intergenic	30.0%
!	AACCCTTTTACAATATTTGC+AGG	+	chr1_4:69896927-69896946	Msa0181650:intron	30.0%
!	ACCCTTTTACAATATTTGCA+GGG	+	chr1_4:69896928-69896947	Msa0181650:intron	30.0%
	ACCCTGCAAATATTGTAAAA+GGG	-	chr1_4:69896932-69896951	None:intergenic	30.0%
	CTACACACATAAACAATTGA+TGG	-	chr1_4:69897081-69897100	None:intergenic	30.0%
!	TCTATAAAGACAGATTTTGC+AGG	+	chr1_4:69897147-69897166	Msa0181650:CDS	30.0%
	AAGCCTATTGATATAGTAGA+TGG	+	chr1_4:69897228-69897247	Msa0181650:CDS	30.0%
	TGATATAGTAGATGGAAAGA+AGG	+	chr1_4:69897236-69897255	Msa0181650:CDS	30.0%
	TTTAATTGTGCTACCATTGA+AGG	-	chr1_4:69897262-69897281	None:intergenic	30.0%
	TCCTTATGTAGAACAATAGT+GGG	-	chr1_4:69897330-69897349	None:intergenic	30.0%
	ATCCTTATGTAGAACAATAG+TGG	-	chr1_4:69897331-69897350	None:intergenic	30.0%
!!!	GATTTCAAGATTTTTTCCCT+TGG	-	chr1_4:69897370-69897389	None:intergenic	30.0%
	CTTGAAATCAACAAAAGAAC+TGG	+	chr1_4:69897381-69897400	Msa0181650:CDS	30.0%
!!!	CTGTCCTTATTTTTCATATC+AGG	-	chr1_4:69897480-69897499	None:intergenic	30.0%
!!	TGGACACTAGTTCTTTTAAA+GGG	+	chr1_4:69897502-69897521	Msa0181650:CDS	30.0%
	AAAATCACAAAGTCATGCAT+TGG	+	chr1_4:69897587-69897606	Msa0181650:CDS	30.0%
!!!	TTTTTCAAGACTGCTATACT+TGG	+	chr1_4:69897621-69897640	Msa0181650:CDS	30.0%
!!	TTTTCAAGACTGCTATACTT+GGG	+	chr1_4:69897622-69897641	Msa0181650:CDS	30.0%
!	ACTGATTCTAGATTCTGTTA+TGG	+	chr1_4:69897663-69897682	Msa0181650:intron	30.0%
!!	GAATCAGTTTTTAGACGATT+TGG	-	chr1_4:69898047-69898066	None:intergenic	30.0%
!!	TCTTTTGGAGATGTCTTTAA+TGG	+	chr1_4:69898140-69898159	Msa0181650:three_prime_UTR	30.0%
!	TTAAAGGTAATGGCTAAACA+AGG	-	chr1_4:69898304-69898323	None:intergenic	30.0%
	AGCACTCATTCACATAATTT+GGG	-	chr1_4:69898361-69898380	None:intergenic	30.0%
	AAGCACTCATTCACATAATT+TGG	-	chr1_4:69898362-69898381	None:intergenic	30.0%
	AATAATTGCAATCATAGGAG+TGG	-	chr1_4:69898410-69898429	None:intergenic	30.0%
!	GAAACCCTAGGTTTTCATTT+GGG	+	chr1_4:69896414-69896433	Msa0181650:intron	35.0%
!	AAACCCTAGGTTTTCATTTG+GGG	+	chr1_4:69896415-69896434	Msa0181650:intron	35.0%
!!	TTTGGGTTTCTTTTGATGGT+TGG	+	chr1_4:69896578-69896597	Msa0181650:intron	35.0%
!!	TTGGGTTTCTTTTGATGGTT+GGG	+	chr1_4:69896579-69896598	Msa0181650:intron	35.0%
	ATTCTTTCCGAAGAATCAGA+CGG	+	chr1_4:69896665-69896684	Msa0181650:intron	35.0%
	AAATTCTCCGTCTGATTCTT+CGG	-	chr1_4:69896675-69896694	None:intergenic	35.0%
	CACCCTGCAAATATTGTAAA+AGG	-	chr1_4:69896933-69896952	None:intergenic	35.0%
!	TAGCTACTTTAACCGCAAAA+TGG	+	chr1_4:69896965-69896984	Msa0181650:exon	35.0%
	TTTATGTGTGTAGAATGGCT+AGG	+	chr1_4:69897088-69897107	Msa0181650:intron	35.0%
	TTGCAGGAAAGATGAAATCT+AGG	+	chr1_4:69897163-69897182	Msa0181650:CDS	35.0%
	TGCAGGAAAGATGAAATCTA+GGG	+	chr1_4:69897164-69897183	Msa0181650:CDS	35.0%
!!	TTTGGTGTTTGATTGACAGA+GGG	-	chr1_4:69897285-69897304	None:intergenic	35.0%
!!	ATTTGGTGTTTGATTGACAG+AGG	-	chr1_4:69897286-69897305	None:intergenic	35.0%
	TTCTTGGACTTGAGTAGATT+TGG	-	chr1_4:69897303-69897322	None:intergenic	35.0%
	CCTTATGTAGAACAATAGTG+GGG	-	chr1_4:69897329-69897348	None:intergenic	35.0%
!	GCTTCTAAGAAGTCAAATAC+TGG	+	chr1_4:69897411-69897430	Msa0181650:CDS	35.0%
	TATGAAAAATAAGGACAGCC+TGG	+	chr1_4:69897482-69897501	Msa0181650:CDS	35.0%
!	CTTTAAAAGAACTAGTGTCC+AGG	-	chr1_4:69897503-69897522	None:intergenic	35.0%
!!	CTGGACACTAGTTCTTTTAA+AGG	+	chr1_4:69897501-69897520	Msa0181650:CDS	35.0%
	ATTATGAAACATCCGCTCTT+CGG	-	chr1_4:69897553-69897572	None:intergenic	35.0%
	TTTCAAGACTGCTATACTTG+GGG	+	chr1_4:69897623-69897642	Msa0181650:CDS	35.0%
	TGAAATTGCAATCGAAAGCT+GGG	-	chr1_4:69898009-69898028	None:intergenic	35.0%
	TGTGTACTTCATATTGTTGC+AGG	-	chr1_4:69898073-69898092	None:intergenic	35.0%
	AATAATTGCCATCACAAGAG+TGG	-	chr1_4:69898113-69898132	None:intergenic	35.0%
	CCAGCAATAATTGCAATCAT+AGG	-	chr1_4:69898415-69898434	None:intergenic	35.0%
	CCTATGATTGCAATTATTGC+TGG	+	chr1_4:69898412-69898431	Msa0181650:three_prime_UTR	35.0%
!	GAAACCCTAGGTTTTCATTT+GGG	+	chr1_4:69896414-69896433	Msa0181650:intron	35.0%
!	AAACCCTAGGTTTTCATTTG+GGG	+	chr1_4:69896415-69896434	Msa0181650:intron	35.0%
!!	TTTGGGTTTCTTTTGATGGT+TGG	+	chr1_4:69896578-69896597	Msa0181650:intron	35.0%
!!	TTGGGTTTCTTTTGATGGTT+GGG	+	chr1_4:69896579-69896598	Msa0181650:intron	35.0%
	ATTCTTTCCGAAGAATCAGA+CGG	+	chr1_4:69896665-69896684	Msa0181650:intron	35.0%
	AAATTCTCCGTCTGATTCTT+CGG	-	chr1_4:69896675-69896694	None:intergenic	35.0%
	CACCCTGCAAATATTGTAAA+AGG	-	chr1_4:69896933-69896952	None:intergenic	35.0%
!	TAGCTACTTTAACCGCAAAA+TGG	+	chr1_4:69896965-69896984	Msa0181650:exon	35.0%
	TTTATGTGTGTAGAATGGCT+AGG	+	chr1_4:69897088-69897107	Msa0181650:intron	35.0%
	TTGCAGGAAAGATGAAATCT+AGG	+	chr1_4:69897163-69897182	Msa0181650:CDS	35.0%
	TGCAGGAAAGATGAAATCTA+GGG	+	chr1_4:69897164-69897183	Msa0181650:CDS	35.0%
!!	TTTGGTGTTTGATTGACAGA+GGG	-	chr1_4:69897285-69897304	None:intergenic	35.0%
!!	ATTTGGTGTTTGATTGACAG+AGG	-	chr1_4:69897286-69897305	None:intergenic	35.0%
	TTCTTGGACTTGAGTAGATT+TGG	-	chr1_4:69897303-69897322	None:intergenic	35.0%
	CCTTATGTAGAACAATAGTG+GGG	-	chr1_4:69897329-69897348	None:intergenic	35.0%
!	GCTTCTAAGAAGTCAAATAC+TGG	+	chr1_4:69897411-69897430	Msa0181650:CDS	35.0%
	TATGAAAAATAAGGACAGCC+TGG	+	chr1_4:69897482-69897501	Msa0181650:CDS	35.0%
!	CTTTAAAAGAACTAGTGTCC+AGG	-	chr1_4:69897503-69897522	None:intergenic	35.0%
!!	CTGGACACTAGTTCTTTTAA+AGG	+	chr1_4:69897501-69897520	Msa0181650:CDS	35.0%
	ATTATGAAACATCCGCTCTT+CGG	-	chr1_4:69897553-69897572	None:intergenic	35.0%
	TTTCAAGACTGCTATACTTG+GGG	+	chr1_4:69897623-69897642	Msa0181650:CDS	35.0%
	TGAAATTGCAATCGAAAGCT+GGG	-	chr1_4:69898009-69898028	None:intergenic	35.0%
	TGTGTACTTCATATTGTTGC+AGG	-	chr1_4:69898073-69898092	None:intergenic	35.0%
	AATAATTGCCATCACAAGAG+TGG	-	chr1_4:69898113-69898132	None:intergenic	35.0%
	CCAGCAATAATTGCAATCAT+AGG	-	chr1_4:69898415-69898434	None:intergenic	35.0%
	CCTATGATTGCAATTATTGC+TGG	+	chr1_4:69898412-69898431	Msa0181650:three_prime_UTR	35.0%
!	TTCCACTGTTTGTTAATCGC+TGG	+	chr1_4:69896247-69896266	Msa0181650:intron	40.0%
	TTCCAGCGATTAACAAACAG+TGG	-	chr1_4:69896252-69896271	None:intergenic	40.0%
	TGAAGGAAAATCGAAACCCT+AGG	+	chr1_4:69896402-69896421	Msa0181650:intron	40.0%
!	CGAAACCCTAGGTTTTCATT+TGG	+	chr1_4:69896413-69896432	Msa0181650:intron	40.0%
	AAGCCCCAAATGAAAACCTA+GGG	-	chr1_4:69896421-69896440	None:intergenic	40.0%
!	TTCATTTGGGGCTTCACAAT+TGG	+	chr1_4:69896427-69896446	Msa0181650:intron	40.0%
!	TCATTTGGGGCTTCACAATT+GGG	+	chr1_4:69896428-69896447	Msa0181650:intron	40.0%
!	GGCTTCACAATTGGGATTTT+GGG	+	chr1_4:69896436-69896455	Msa0181650:intron	40.0%
!	GCTTCACAATTGGGATTTTG+GGG	+	chr1_4:69896437-69896456	Msa0181650:intron	40.0%
!!!	GGATTTTGGGGTTTCTTTTG+TGG	+	chr1_4:69896449-69896468	Msa0181650:intron	40.0%
	ATCAATAGGCTTCACTGCAT+TGG	-	chr1_4:69897220-69897239	None:intergenic	40.0%
!	AACAATAGTGGGGTTGTTCT+TGG	-	chr1_4:69897319-69897338	None:intergenic	40.0%
	CCCCACTATTGTTCTACATA+AGG	+	chr1_4:69897326-69897345	Msa0181650:CDS	40.0%
!!	TAAGGAAGTTGTTTCTGCCA+AGG	+	chr1_4:69897350-69897369	Msa0181650:CDS	40.0%
!!	AAGGAAGTTGTTTCTGCCAA+GGG	+	chr1_4:69897351-69897370	Msa0181650:CDS	40.0%
!!	ACCTTCAGTTTGCTAAAAGC+AGG	-	chr1_4:69897778-69897797	None:intergenic	40.0%
	CATCATCAGACTGAAAAGCA+GGG	-	chr1_4:69897865-69897884	None:intergenic	40.0%
	TGATGCATTCCTGGAATTGA+AGG	+	chr1_4:69897880-69897899	Msa0181650:CDS	40.0%
!	GCAAGAGTCCAGAATTTTCA+AGG	+	chr1_4:69897966-69897985	Msa0181650:CDS	40.0%
	GTGAAATTGCAATCGAAAGC+TGG	-	chr1_4:69898010-69898029	None:intergenic	40.0%
!	ATATTGTGCCACTCTTGTGA+TGG	+	chr1_4:69898102-69898121	Msa0181650:three_prime_UTR	40.0%
!!	ATTTTGTGCCACTCTTGTGT+TGG	+	chr1_4:69898248-69898267	Msa0181650:three_prime_UTR	40.0%
	AATAGATGCCAACACAAGAG+TGG	-	chr1_4:69898259-69898278	None:intergenic	40.0%
!	TTCCACTGTTTGTTAATCGC+TGG	+	chr1_4:69896247-69896266	Msa0181650:intron	40.0%
	TTCCAGCGATTAACAAACAG+TGG	-	chr1_4:69896252-69896271	None:intergenic	40.0%
	TGAAGGAAAATCGAAACCCT+AGG	+	chr1_4:69896402-69896421	Msa0181650:intron	40.0%
!	CGAAACCCTAGGTTTTCATT+TGG	+	chr1_4:69896413-69896432	Msa0181650:intron	40.0%
	AAGCCCCAAATGAAAACCTA+GGG	-	chr1_4:69896421-69896440	None:intergenic	40.0%
!	TTCATTTGGGGCTTCACAAT+TGG	+	chr1_4:69896427-69896446	Msa0181650:intron	40.0%
!	TCATTTGGGGCTTCACAATT+GGG	+	chr1_4:69896428-69896447	Msa0181650:intron	40.0%
!	GGCTTCACAATTGGGATTTT+GGG	+	chr1_4:69896436-69896455	Msa0181650:intron	40.0%
!	GCTTCACAATTGGGATTTTG+GGG	+	chr1_4:69896437-69896456	Msa0181650:intron	40.0%
!!!	GGATTTTGGGGTTTCTTTTG+TGG	+	chr1_4:69896449-69896468	Msa0181650:intron	40.0%
	ATCAATAGGCTTCACTGCAT+TGG	-	chr1_4:69897220-69897239	None:intergenic	40.0%
!	AACAATAGTGGGGTTGTTCT+TGG	-	chr1_4:69897319-69897338	None:intergenic	40.0%
	CCCCACTATTGTTCTACATA+AGG	+	chr1_4:69897326-69897345	Msa0181650:CDS	40.0%
!!	TAAGGAAGTTGTTTCTGCCA+AGG	+	chr1_4:69897350-69897369	Msa0181650:CDS	40.0%
!!	AAGGAAGTTGTTTCTGCCAA+GGG	+	chr1_4:69897351-69897370	Msa0181650:CDS	40.0%
!!	ACCTTCAGTTTGCTAAAAGC+AGG	-	chr1_4:69897778-69897797	None:intergenic	40.0%
	CATCATCAGACTGAAAAGCA+GGG	-	chr1_4:69897865-69897884	None:intergenic	40.0%
	TGATGCATTCCTGGAATTGA+AGG	+	chr1_4:69897880-69897899	Msa0181650:CDS	40.0%
!	GCAAGAGTCCAGAATTTTCA+AGG	+	chr1_4:69897966-69897985	Msa0181650:CDS	40.0%
	GTGAAATTGCAATCGAAAGC+TGG	-	chr1_4:69898010-69898029	None:intergenic	40.0%
!	ATATTGTGCCACTCTTGTGA+TGG	+	chr1_4:69898102-69898121	Msa0181650:three_prime_UTR	40.0%
!!	ATTTTGTGCCACTCTTGTGT+TGG	+	chr1_4:69898248-69898267	Msa0181650:three_prime_UTR	40.0%
	AATAGATGCCAACACAAGAG+TGG	-	chr1_4:69898259-69898278	None:intergenic	40.0%
!	GGGTTTGTCTGCGCTTTATT+AGG	+	chr1_4:69896329-69896348	Msa0181650:intron	45.0%
	GAAGCCCCAAATGAAAACCT+AGG	-	chr1_4:69896422-69896441	None:intergenic	45.0%
!	GGGCTTCACAATTGGGATTT+TGG	+	chr1_4:69896435-69896454	Msa0181650:intron	45.0%
!	GCTAGGCTGATTCTTAATGC+TGG	+	chr1_4:69897105-69897124	Msa0181650:intron	45.0%
!	GGAAAGATGAAATCTAGGGC+TGG	+	chr1_4:69897168-69897187	Msa0181650:CDS	45.0%
!	AAGATGAAATCTAGGGCTGG+AGG	+	chr1_4:69897171-69897190	Msa0181650:CDS	45.0%
	GCATTGGATAGATCACCAAG+TGG	-	chr1_4:69897204-69897223	None:intergenic	45.0%
	GATGGAAAGAAGGCCTTCAA+TGG	+	chr1_4:69897246-69897265	Msa0181650:CDS	45.0%
	AGAAGTCAAATACTGGCAGC+AGG	+	chr1_4:69897418-69897437	Msa0181650:CDS	45.0%
	AAGACTGCTATACTTGGGGA+TGG	+	chr1_4:69897627-69897646	Msa0181650:CDS	45.0%
!!	GCCTGCTTTTAGCAAACTGA+AGG	+	chr1_4:69897774-69897793	Msa0181650:CDS	45.0%
	GCATCATCAGACTGAAAAGC+AGG	-	chr1_4:69897866-69897885	None:intergenic	45.0%
!	TCAGTCTGATGATGCATTCC+TGG	+	chr1_4:69897871-69897890	Msa0181650:intron	45.0%
!	GGGTTTGTCTGCGCTTTATT+AGG	+	chr1_4:69896329-69896348	Msa0181650:intron	45.0%
	GAAGCCCCAAATGAAAACCT+AGG	-	chr1_4:69896422-69896441	None:intergenic	45.0%
!	GGGCTTCACAATTGGGATTT+TGG	+	chr1_4:69896435-69896454	Msa0181650:intron	45.0%
!	GCTAGGCTGATTCTTAATGC+TGG	+	chr1_4:69897105-69897124	Msa0181650:intron	45.0%
!	GGAAAGATGAAATCTAGGGC+TGG	+	chr1_4:69897168-69897187	Msa0181650:CDS	45.0%
!	AAGATGAAATCTAGGGCTGG+AGG	+	chr1_4:69897171-69897190	Msa0181650:CDS	45.0%
	GCATTGGATAGATCACCAAG+TGG	-	chr1_4:69897204-69897223	None:intergenic	45.0%
	GATGGAAAGAAGGCCTTCAA+TGG	+	chr1_4:69897246-69897265	Msa0181650:CDS	45.0%
	AGAAGTCAAATACTGGCAGC+AGG	+	chr1_4:69897418-69897437	Msa0181650:CDS	45.0%
	AAGACTGCTATACTTGGGGA+TGG	+	chr1_4:69897627-69897646	Msa0181650:CDS	45.0%
!!	GCCTGCTTTTAGCAAACTGA+AGG	+	chr1_4:69897774-69897793	Msa0181650:CDS	45.0%
	GCATCATCAGACTGAAAAGC+AGG	-	chr1_4:69897866-69897885	None:intergenic	45.0%
!	TCAGTCTGATGATGCATTCC+TGG	+	chr1_4:69897871-69897890	Msa0181650:intron	45.0%
!!!	TTCTTTATTTTATTTTATTT+TGG	+	chr1_4:69896619-69896638	Msa0181650:intron	5.0%
!!!	TTCTTTATTTTATTTTATTT+TGG	+	chr1_4:69896619-69896638	Msa0181650:intron	5.0%
!!	CAGTTCGTGCAGCCATTTTG+CGG	-	chr1_4:69896980-69896999	None:intergenic	50.0%
	CTTAATGCTGGTGCAGATGC+AGG	+	chr1_4:69897117-69897136	Msa0181650:intron	50.0%
	GCTGGAGGAAGAAAACCACT+TGG	+	chr1_4:69897186-69897205	Msa0181650:CDS	50.0%
	CAGGCATCTCCTTCAATTCC+AGG	-	chr1_4:69897892-69897911	None:intergenic	50.0%
	GGCATATCAGGCAACTCTTC+AGG	-	chr1_4:69897911-69897930	None:intergenic	50.0%
	CCATGCTTAGCAGATGGAGA+CGG	-	chr1_4:69897932-69897951	None:intergenic	50.0%
	TGGACTCTTGCAGCATACTG+GGG	-	chr1_4:69897957-69897976	None:intergenic	50.0%
	CTGGACTCTTGCAGCATACT+GGG	-	chr1_4:69897958-69897977	None:intergenic	50.0%
	TCTGGACTCTTGCAGCATAC+TGG	-	chr1_4:69897959-69897978	None:intergenic	50.0%
!!	CAGTTCGTGCAGCCATTTTG+CGG	-	chr1_4:69896980-69896999	None:intergenic	50.0%
	CTTAATGCTGGTGCAGATGC+AGG	+	chr1_4:69897117-69897136	Msa0181650:intron	50.0%
	GCTGGAGGAAGAAAACCACT+TGG	+	chr1_4:69897186-69897205	Msa0181650:CDS	50.0%
	CAGGCATCTCCTTCAATTCC+AGG	-	chr1_4:69897892-69897911	None:intergenic	50.0%
	GGCATATCAGGCAACTCTTC+AGG	-	chr1_4:69897911-69897930	None:intergenic	50.0%
	CCATGCTTAGCAGATGGAGA+CGG	-	chr1_4:69897932-69897951	None:intergenic	50.0%
	TGGACTCTTGCAGCATACTG+GGG	-	chr1_4:69897957-69897976	None:intergenic	50.0%
	CTGGACTCTTGCAGCATACT+GGG	-	chr1_4:69897958-69897977	None:intergenic	50.0%
	TCTGGACTCTTGCAGCATAC+TGG	-	chr1_4:69897959-69897978	None:intergenic	50.0%
	CTGATGCAATCGCCGAAGAG+CGG	+	chr1_4:69897538-69897557	Msa0181650:CDS	55.0%
	GCAGATGGAGACGGCATATC+AGG	-	chr1_4:69897923-69897942	None:intergenic	55.0%
	CCGTCTCCATCTGCTAAGCA+TGG	+	chr1_4:69897929-69897948	Msa0181650:CDS	55.0%
	GGGGAACCATGCTTAGCAGA+TGG	-	chr1_4:69897938-69897957	None:intergenic	55.0%
	CTGATGCAATCGCCGAAGAG+CGG	+	chr1_4:69897538-69897557	Msa0181650:CDS	55.0%
	GCAGATGGAGACGGCATATC+AGG	-	chr1_4:69897923-69897942	None:intergenic	55.0%
	CCGTCTCCATCTGCTAAGCA+TGG	+	chr1_4:69897929-69897948	Msa0181650:CDS	55.0%
	GGGGAACCATGCTTAGCAGA+TGG	-	chr1_4:69897938-69897957	None:intergenic	55.0%
	CGCTCTTCGGCGATTGCATC+AGG	-	chr1_4:69897540-69897559	None:intergenic	60.0%
	CGCTCTTCGGCGATTGCATC+AGG	-	chr1_4:69897540-69897559	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	69896088	69898503	69896088	ID=Msa0181650;Name=Msa0181650
chr1_4	mRNA	69896088	69898503	69896088	ID=Msa0181650-mRNA-1;Parent=Msa0181650;Name=Msa0181650-mRNA-1;_AED=0.03;_eAED=0.03;_QI=99\|1\|1\|1\|0.75\|0.6\|5\|440\|272
chr1_4	exon	69896088	69896151	69896088	ID=Msa0181650-mRNA-1:exon:23306;Parent=Msa0181650-mRNA-1
chr1_4	exon	69896949	69897041	69896949	ID=Msa0181650-mRNA-1:exon:23307;Parent=Msa0181650-mRNA-1
chr1_4	exon	69897133	69897648	69897133	ID=Msa0181650-mRNA-1:exon:23308;Parent=Msa0181650-mRNA-1
chr1_4	exon	69897740	69897795	69897740	ID=Msa0181650-mRNA-1:exon:23309;Parent=Msa0181650-mRNA-1
chr1_4	exon	69897875	69898503	69897875	ID=Msa0181650-mRNA-1:exon:23310;Parent=Msa0181650-mRNA-1
chr1_4	five_prime_UTR	69896088	69896151	69896088	ID=Msa0181650-mRNA-1:five_prime_utr;Parent=Msa0181650-mRNA-1
chr1_4	five_prime_UTR	69896949	69896983	69896949	ID=Msa0181650-mRNA-1:five_prime_utr;Parent=Msa0181650-mRNA-1
chr1_4	CDS	69896984	69897041	69896984	ID=Msa0181650-mRNA-1:cds;Parent=Msa0181650-mRNA-1
chr1_4	CDS	69897133	69897648	69897133	ID=Msa0181650-mRNA-1:cds;Parent=Msa0181650-mRNA-1
chr1_4	CDS	69897740	69897795	69897740	ID=Msa0181650-mRNA-1:cds;Parent=Msa0181650-mRNA-1
chr1_4	CDS	69897875	69898063	69897875	ID=Msa0181650-mRNA-1:cds;Parent=Msa0181650-mRNA-1
chr1_4	three_prime_UTR	69898064	69898503	69898064	ID=Msa0181650-mRNA-1:three_prime_utr;Parent=Msa0181650-mRNA-1

Gene Sequence

>Msa0181650

ATGGCTGCACGAACTGTTCGTTTGTTTCAAGACCAAAATGTCATTGATCATGTTAATGATGCAGGAACTATGTCTATAAAGACAGATTTTGCAGGAAAGATGAAATCTAGGGCTGGAGGAAGAAAACCACTTGGTGATCTATCCAATGCAGTGAAGCCTATTGATATAGTAGATGGAAAGAAGGCCTTCAATGGTAGCACAATTAAACCCTCTGTCAATCAAACACCAAATCTACTCAAGTCCAAGAACAACCCCACTATTGTTCTACATAAGGATAAGGAAGTTGTTTCTGCCAAGGGAAAAAATCTTGAAATCAACAAAAGAACTGGCAGCAAAGCTTCTAAGAAGTCAAATACTGGCAGCAGGAGAGCACTTACTGATATCTCAAACTCGCTGCATGTACCTGATATGAAAAATAAGGACAGCCTGGACACTAGTTCTTTTAAAGGGAAATATCTTCATCCTGATGCAATCGCCGAAGAGCGGATGTTTCATAATCATGAAGAATGTATAAAATCACAAAGTCATGCATTGGATATGCATCATTTTTTCAAGACTGCTATACTTGGGGATGATTTGGATGATGACATGAAAATTTCATTTGAACAGCCTGCTTTTAGCAAACTGAAGTCTGATGATGCATTCCTGGAATTGAAGGAGATGCCTGAAGAGTTGCCTGATATGCCGTCTCCATCTGCTAAGCATGGTTCCCCAGTATGCTGCAAGAGTCCAGAATTTTCAAGGATTTCAATGTGGGATGACCCAGCTTTCGATTGCAATTTCACTTTGATAGAATCACCCAAATCGTCTAAAAACTGA

Protein sequence

>Msa0181650

MAARTVRLFQDQNVIDHVNDAGTMSIKTDFAGKMKSRAGGRKPLGDLSNAVKPIDIVDGKKAFNGSTIKPSVNQTPNLLKSKNNPTIVLHKDKEVVSAKGKNLEINKRTGSKASKKSNTGSRRALTDISNSLHVPDMKNKDSLDTSSFKGKYLHPDAIAEERMFHNHEECIKSQSHALDMHHFFKTAILGDDLDDDMKISFEQPAFSKLKSDDAFLELKEMPEELPDMPSPSAKHGSPVCCKSPEFSRISMWDDPAFDCNFTLIESPKSSKN*