AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0842070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842070 MtrunA17_Chr5g0411971 97.837 601 13 0 1 601 1 601 0.0 1238
Msa0842070 MtrunA17_Chr5g0421591 96.875 576 18 0 26 601 1 576 0.0 1172
Msa0842070 MtrunA17_Chr5g0421521 96.528 576 20 0 26 601 1 576 0.0 1169
Msa0842070 MtrunA17_Chr2g0312631 47.826 368 165 5 242 601 241 589 2.32e-101 331
Msa0842070 MtrunA17_Chr1g0191851 50.181 277 135 2 327 601 76 351 5.31e-85 281
Msa0842070 MtrunA17_Chr7g0272871 48.197 305 150 5 300 601 32 331 2.71e-80 268
Msa0842070 MtrunA17_Chr1g0195111 44.397 232 116 4 379 601 376 603 3.14e-54 199
Msa0842070 MtrunA17_Chr1g0192481 41.102 236 119 4 379 601 38 266 2.12e-50 183
Msa0842070 MtrunA17_Chr7g0271961 42.918 233 113 4 379 601 381 603 4.14e-50 187
Msa0842070 MtrunA17_Chr4g0042061 34.524 336 179 8 286 602 340 653 3.98e-47 177
Msa0842070 MtrunA17_Chr2g0319271 35.174 344 198 8 279 602 283 621 1.13e-46 176
Msa0842070 MtrunA17_Chr7g0257301 38.372 258 119 6 379 601 372 624 4.97e-45 172
Msa0842070 MtrunA17_Chr3g0102921 33.663 303 170 7 322 601 364 658 7.48e-44 169
Msa0842070 MtrunA17_Chr6g0484511 41.379 203 97 4 357 548 251 442 1.04e-43 163
Msa0842070 MtrunA17_Chr8g0390981 43.415 205 94 5 355 548 475 668 1.71e-43 166
Msa0842070 MtrunA17_Chr2g0280421 40.650 246 137 7 365 602 403 647 1.72e-43 166
Msa0842070 MtrunA17_Chr7g0269691 43.956 182 81 3 379 548 380 552 1.31e-42 161
Msa0842070 MtrunA17_Chr5g0447041 32.881 295 145 7 357 601 392 683 6.24e-42 163
Msa0842070 MtrunA17_Chr8g0386901 46.067 178 85 5 379 548 463 637 4.77e-41 158
Msa0842070 MtrunA17_Chr4g0049011 31.283 374 201 10 248 602 163 499 1.24e-40 157
Msa0842070 MtrunA17_Chr8g0369881 34.630 257 164 3 347 601 822 1076 1.19e-39 156
Msa0842070 MtrunA17_Chr5g0407791 33.984 256 164 3 347 601 839 1090 1.22e-38 153
Msa0842070 MtrunA17_Chr8g0367581 36.667 270 151 7 330 587 69 330 6.64e-35 141
Msa0842070 MtrunA17_Chr1g0191181 34.328 268 144 6 352 601 39 292 1.71e-34 139
Msa0842070 MtrunA17_Chr4g0045381 37.788 217 116 6 399 601 193 404 7.18e-30 126
Msa0842070 MtrunA17_Chr1g0182151 32.456 228 132 6 394 601 49 274 1.86e-29 124
Msa0842070 MtrunA17_Chr2g0327581 33.766 231 131 6 391 601 40 268 5.99e-29 123
Msa0842070 MtrunA17_Chr2g0322291 38.073 218 114 7 399 601 88 299 1.07e-28 122
Msa0842070 MtrunA17_Chr4g0069141 33.945 218 123 6 399 601 153 364 1.90e-26 115
Msa0842070 MtrunA17_Chr1g0178411 33.040 227 126 6 399 601 13 237 6.26e-26 113
Msa0842070 MtrunA17_Chr7g0266631 33.624 229 122 7 399 601 9 233 8.22e-26 113
Msa0842070 MtrunA17_Chr4g0062291 34.247 219 131 4 392 601 116 330 9.99e-25 109
Msa0842070 MtrunA17_Chr3g0122121 32.751 229 127 8 391 601 88 307 2.81e-24 108
Msa0842070 MtrunA17_Chr2g0307481 29.434 265 168 7 347 601 18 273 2.82e-22 101
Msa0842070 MtrunA17_Chr1g0193221 34.483 203 120 6 400 601 4 194 9.45e-22 100
Msa0842070 MtrunA17_Chr3g0132921 30.045 223 130 5 399 601 9 225 3.69e-21 97.4
Msa0842070 MtrunA17_Chr8g0377731 35.028 177 96 5 442 601 89 263 7.28e-21 97.8
Msa0842070 MtrunA17_Chr7g0258991 32.536 209 132 5 394 601 68 268 8.77e-21 97.4
Msa0842070 MtrunA17_Chr3g0101021 34.091 220 113 10 399 601 75 279 9.41e-21 97.4
Msa0842070 MtrunA17_Chr5g0445211 31.507 219 122 8 399 601 74 280 1.79e-20 96.3
Msa0842070 MtrunA17_Chr1g0152231 36.095 169 104 3 434 601 36 201 2.69e-20 95.5
Msa0842070 MtrunA17_Chr3g0145071 31.754 211 135 5 392 601 92 294 3.90e-19 92.0
Msa0842070 MtrunA17_Chr3g0134191 30.568 229 121 8 400 601 9 226 5.42e-19 91.7
Msa0842070 MtrunA17_Chr4g0035661 32.039 206 131 5 397 601 87 284 5.54e-19 91.7
Msa0842070 MtrunA17_Chr4g0036001 32.301 226 136 8 381 601 7 220 8.71e-19 90.9
Msa0842070 MtrunA17_Chr5g0427481 29.911 224 128 7 400 601 18 234 9.56e-19 90.9
Msa0842070 MtrunA17_Chr1g0153061 29.464 224 130 5 400 601 9 226 2.06e-18 89.7
Msa0842070 MtrunA17_Chr7g0238581 28.169 213 136 6 400 601 26 232 5.44e-18 87.8
Msa0842070 MtrunA17_Chr4g0053211 29.130 230 127 9 399 601 12 232 1.56e-17 87.0
Msa0842070 MtrunA17_Chr5g0398521 33.636 220 115 9 398 601 56 260 8.95e-17 84.3
Msa0842070 MtrunA17_Chr4g0070001 30.918 207 125 7 400 601 144 337 9.61e-17 84.3
Msa0842070 MtrunA17_Chr7g0245931 30.594 219 123 7 398 601 51 255 3.44e-16 82.4
Msa0842070 MtrunA17_Chr6g0483701 30.435 207 129 6 400 601 31 227 5.00e-16 82.0
Msa0842070 MtrunA17_Chr5g0405181 30.909 220 130 8 393 601 10 218 6.21e-15 78.6
Msa0842070 MtrunA17_Chr8g0372171 29.665 209 129 6 400 601 20 217 2.62e-14 76.6
Msa0842070 MtrunA17_Chr3g0142261 30.288 208 128 6 400 601 20 216 7.84e-14 75.1
Msa0842070 MtrunA17_Chr2g0331761 27.751 209 134 6 400 601 186 384 8.87e-14 74.7
Msa0842070 MtrunA17_Chr6g0485471 25.962 208 139 5 400 601 116 314 2.54e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842070 AT2G22610.3 62.349 579 218 0 23 601 42 620 0.0 774
Msa0842070 AT2G22610.1 62.003 579 219 1 23 601 42 619 0.0 766
Msa0842070 AT2G22610.2 62.003 579 219 1 23 601 42 619 0.0 766
Msa0842070 AT1G72250.3 43.009 565 280 8 60 601 173 718 9.35e-142 442
Msa0842070 AT1G72250.4 43.009 565 280 8 60 601 172 717 1.06e-141 442
Msa0842070 AT1G72250.2 41.947 565 274 9 60 601 173 706 4.18e-133 419
Msa0842070 AT1G72250.1 41.239 565 270 10 60 601 172 697 6.97e-127 402
Msa0842070 AT5G27550.2 52.482 282 126 3 325 601 58 336 8.30e-90 295
Msa0842070 AT5G27550.1 52.482 282 126 3 325 601 58 336 8.30e-90 295
Msa0842070 AT2G47500.2 45.652 230 114 3 379 601 379 604 5.73e-56 204
Msa0842070 AT1G09170.6 47.845 232 107 5 379 601 414 640 7.84e-56 202
Msa0842070 AT1G09170.8 47.845 232 107 5 379 601 414 640 7.84e-56 202
Msa0842070 AT2G47500.1 45.652 230 114 3 379 601 379 604 9.69e-56 204
Msa0842070 AT1G09170.4 47.845 232 107 5 379 601 414 640 1.47e-55 202
Msa0842070 AT1G09170.3 47.845 232 107 5 379 601 414 640 1.64e-55 202
Msa0842070 AT1G09170.7 47.845 232 107 5 379 601 414 640 1.64e-55 202
Msa0842070 AT5G27000.1 44.444 252 118 4 358 601 364 601 1.65e-55 203
Msa0842070 AT1G09170.2 47.845 232 107 5 379 601 414 640 2.35e-55 202
Msa0842070 AT1G09170.5 47.845 232 107 5 379 601 414 640 4.43e-55 202
Msa0842070 AT1G73860.1 35.806 391 205 13 239 601 346 718 4.40e-54 199
Msa0842070 AT1G73860.2 35.101 396 201 15 239 601 263 635 7.54e-54 198
Msa0842070 AT1G18410.3 35.000 360 214 8 259 601 341 697 5.06e-53 196
Msa0842070 AT1G18410.2 35.000 360 214 8 259 601 341 697 5.06e-53 196
Msa0842070 AT1G18410.4 34.819 359 216 7 259 601 484 840 5.66e-53 196
Msa0842070 AT1G18410.5 35.655 359 205 10 259 601 331 679 4.49e-51 190
Msa0842070 AT1G18410.1 35.475 358 207 9 259 601 484 832 5.92e-51 190
Msa0842070 AT3G10310.1 35.329 334 186 10 290 601 245 570 3.62e-49 184
Msa0842070 AT3G10310.2 35.329 334 186 10 290 601 245 570 5.08e-49 184
Msa0842070 AT3G44730.1 39.764 254 137 6 357 601 339 585 5.75e-47 178
Msa0842070 AT3G44730.4 39.764 254 137 6 357 601 339 585 5.75e-47 178
Msa0842070 AT3G44730.2 39.764 254 137 6 357 601 384 630 6.58e-47 178
Msa0842070 AT3G44730.3 39.764 254 137 6 357 601 384 630 6.58e-47 178
Msa0842070 AT4G21270.1 34.795 342 177 9 283 602 336 653 1.93e-46 176
Msa0842070 AT4G27180.1 39.394 264 143 5 364 611 352 614 3.35e-46 174
Msa0842070 AT4G27180.2 39.394 264 143 5 364 611 352 614 3.35e-46 174
Msa0842070 AT5G54670.3 37.456 283 161 6 335 602 273 554 3.56e-45 171
Msa0842070 AT5G54670.1 37.456 283 161 6 335 602 333 614 5.33e-45 171
Msa0842070 AT5G54670.2 37.456 283 161 6 335 602 333 614 5.33e-45 171
Msa0842070 AT5G41310.1 40.807 223 104 6 387 601 410 612 2.40e-44 170
Msa0842070 AT4G05190.2 35.938 320 167 11 316 602 323 637 3.07e-44 169
Msa0842070 AT4G05190.1 35.938 320 167 11 316 602 336 650 3.96e-44 169
Msa0842070 AT1G63640.5 38.912 239 140 3 369 601 432 670 6.41e-44 169
Msa0842070 AT1G63640.1 38.912 239 140 3 369 601 442 680 7.50e-44 169
Msa0842070 AT1G63640.4 38.912 239 140 3 369 601 442 680 7.50e-44 169
Msa0842070 AT1G63640.3 38.912 239 140 3 369 601 442 680 7.58e-44 169
Msa0842070 AT5G65930.1 37.262 263 149 5 347 601 834 1088 1.17e-42 166
Msa0842070 AT5G65930.2 37.262 263 149 5 347 601 835 1089 1.19e-42 165
Msa0842070 AT5G65930.3 37.262 263 149 5 347 601 841 1095 1.32e-42 165
Msa0842070 AT1G63640.2 37.815 238 137 3 369 601 442 673 5.43e-41 160
Msa0842070 AT1G55550.1 38.115 244 135 5 365 601 57 291 5.03e-40 157
Msa0842070 AT5G65460.6 35.117 299 161 9 311 587 35 322 1.13e-34 141
Msa0842070 AT5G65460.1 35.117 299 161 9 311 587 35 322 1.32e-34 141
Msa0842070 AT5G65460.2 35.117 299 161 9 311 587 35 322 1.42e-34 140
Msa0842070 AT5G65460.4 35.117 299 161 9 311 587 35 322 1.52e-34 140
Msa0842070 AT5G10470.1 35.889 287 158 8 311 582 46 321 5.68e-34 139
Msa0842070 AT5G10470.2 35.889 287 158 8 311 582 46 321 5.68e-34 139
Msa0842070 AT1G09170.1 38.362 232 93 6 379 601 414 604 8.62e-34 138
Msa0842070 AT5G27950.1 33.708 267 147 6 352 601 30 283 1.84e-33 136
Msa0842070 AT5G65460.3 34.314 306 161 10 311 587 35 329 2.31e-32 134
Msa0842070 AT3G19050.1 38.073 218 114 8 399 601 193 404 8.39e-32 132
Msa0842070 AT2G28620.3 37.104 221 120 6 399 601 50 269 1.33e-29 125
Msa0842070 AT2G28620.2 37.104 221 120 6 399 601 50 269 1.33e-29 125
Msa0842070 AT2G28620.1 37.104 221 120 6 399 601 50 269 1.44e-29 125
Msa0842070 AT2G37420.1 31.982 222 130 5 399 601 48 267 2.11e-27 118
Msa0842070 AT2G37420.2 31.982 222 130 5 399 601 48 267 2.11e-27 118
Msa0842070 AT3G45850.2 32.883 222 128 5 399 601 55 274 5.93e-27 117
Msa0842070 AT3G45850.1 32.883 222 128 5 399 601 55 274 5.93e-27 117
Msa0842070 AT3G17360.1 34.529 223 115 7 399 601 168 379 6.54e-26 114
Msa0842070 AT3G17360.2 34.862 218 121 7 399 601 168 379 6.55e-26 114
Msa0842070 AT3G17360.3 34.862 218 121 7 399 601 168 379 6.97e-26 114
Msa0842070 AT4G14150.1 33.051 236 126 8 386 601 74 297 3.50e-25 112
Msa0842070 AT3G44050.1 36.239 218 118 7 399 601 93 304 4.11e-24 108
Msa0842070 AT2G36200.2 32.456 228 126 7 399 601 12 236 8.94e-24 107
Msa0842070 AT2G36200.1 32.456 228 126 7 399 601 12 236 9.07e-24 107
Msa0842070 AT3G23670.1 33.945 218 116 7 400 601 97 302 1.89e-23 106
Msa0842070 AT3G23670.2 33.945 218 116 7 400 601 97 302 2.46e-23 105
Msa0842070 AT1G21730.1 34.951 206 125 5 397 601 73 270 4.34e-22 101
Msa0842070 AT1G18550.1 31.754 211 131 4 400 601 152 358 1.22e-20 97.1
Msa0842070 AT4G39050.1 31.429 210 135 5 393 601 92 293 2.09e-20 96.7
Msa0842070 AT1G59540.1 35.673 171 100 4 435 601 35 199 3.20e-20 95.9
Msa0842070 AT2G21380.2 33.010 206 129 5 397 601 102 299 9.13e-20 94.7
Msa0842070 AT2G21380.1 33.010 206 129 5 397 601 102 299 9.13e-20 94.7
Msa0842070 AT3G10180.2 33.824 204 121 6 400 601 4 195 1.01e-19 94.7
Msa0842070 AT3G10180.1 33.824 204 121 6 400 601 4 195 1.03e-19 94.4
Msa0842070 AT3G12020.3 30.952 210 136 5 393 601 63 264 1.41e-19 94.0
Msa0842070 AT3G12020.2 30.952 210 136 5 393 601 63 264 1.41e-19 94.0
Msa0842070 AT3G49650.1 32.381 210 131 3 400 601 15 221 1.81e-19 93.2
Msa0842070 AT3G12020.4 31.905 210 134 6 393 601 63 264 2.59e-19 93.2
Msa0842070 AT3G12020.1 31.905 210 134 6 393 601 63 264 2.59e-19 93.2
Msa0842070 AT5G06670.8 30.288 208 136 5 395 601 62 261 5.90e-19 91.7
Msa0842070 AT5G06670.4 30.288 208 136 5 395 601 62 261 5.90e-19 91.7
Msa0842070 AT5G06670.7 30.288 208 136 5 395 601 62 261 5.90e-19 91.7
Msa0842070 AT5G06670.5 30.288 208 136 5 395 601 62 261 6.25e-19 91.7
Msa0842070 AT1G01950.1 33.790 219 116 9 398 601 59 263 6.30e-19 91.7
Msa0842070 AT1G01950.3 33.790 219 116 9 398 601 59 263 6.98e-19 91.7
Msa0842070 AT1G01950.2 33.790 219 116 9 398 601 59 263 7.21e-19 91.7
Msa0842070 AT5G06670.2 30.288 208 136 5 395 601 62 261 9.52e-19 91.3
Msa0842070 AT5G06670.3 30.288 208 136 5 395 601 62 261 9.52e-19 91.3
Msa0842070 AT4G38950.3 31.884 207 125 7 400 601 14 209 1.43e-18 90.5
Msa0842070 AT4G38950.5 31.884 207 125 7 400 601 14 209 1.43e-18 90.5
Msa0842070 AT4G38950.4 31.884 207 125 7 400 601 14 209 1.43e-18 90.5
Msa0842070 AT4G38950.1 31.884 207 125 7 400 601 14 209 1.43e-18 90.5
Msa0842070 AT4G38950.2 31.884 207 125 7 400 601 14 209 1.43e-18 90.5
Msa0842070 AT3G54870.3 34.545 165 96 5 443 601 149 307 1.55e-18 90.5
Msa0842070 AT3G54870.1 34.545 165 96 5 443 601 149 307 1.57e-18 90.5
Msa0842070 AT3G54870.2 34.545 165 96 5 443 601 149 307 1.63e-18 90.5
Msa0842070 AT3G20150.2 33.523 176 99 5 442 601 134 307 3.63e-18 89.4
Msa0842070 AT3G63480.2 33.133 166 102 3 443 601 47 210 3.85e-18 88.2
Msa0842070 AT5G47820.2 29.075 227 131 6 399 601 11 231 3.94e-18 89.4
Msa0842070 AT5G47820.1 29.075 227 131 6 399 601 11 231 3.94e-18 89.4
Msa0842070 AT3G20150.1 33.523 176 99 5 442 601 134 307 4.30e-18 89.4
Msa0842070 AT5G60930.1 31.111 225 126 6 400 601 7 225 5.94e-18 89.0
Msa0842070 AT2G21300.2 31.884 207 125 7 400 601 25 220 7.92e-18 88.2
Msa0842070 AT2G21300.4 31.884 207 125 7 400 601 25 220 7.92e-18 88.2
Msa0842070 AT2G21300.3 31.884 207 125 7 400 601 25 220 7.92e-18 88.2
Msa0842070 AT2G21300.1 31.884 207 125 7 400 601 25 220 7.92e-18 88.2
Msa0842070 AT2G21300.5 31.884 207 125 7 400 601 25 220 7.92e-18 88.2
Msa0842070 AT5G60930.2 31.111 225 126 6 400 601 7 225 7.99e-18 88.6
Msa0842070 AT5G60930.3 31.111 225 126 6 400 601 7 225 1.10e-17 88.2
Msa0842070 AT3G63480.1 34.118 170 99 5 443 601 47 214 1.21e-17 86.7
Msa0842070 AT1G18370.1 31.731 208 125 7 400 601 32 228 1.46e-17 87.4
Msa0842070 AT5G06670.6 29.493 217 135 6 395 601 62 270 2.87e-17 86.7
Msa0842070 AT5G06670.1 29.493 217 135 6 395 601 62 270 2.87e-17 86.7
Msa0842070 AT1G12430.2 33.028 218 115 9 400 601 71 273 1.92e-16 84.0
Msa0842070 AT1G12430.1 33.028 218 115 9 400 601 71 273 1.94e-16 84.0
Msa0842070 AT5G02370.1 27.442 215 137 6 399 601 20 227 3.06e-15 79.3
Msa0842070 AT4G24170.1 29.902 204 132 5 400 601 7 201 3.96e-15 79.7
Msa0842070 AT4G24170.2 29.902 204 132 5 400 601 7 201 3.96e-15 79.7
Msa0842070 AT3G16060.1 28.636 220 134 6 392 601 162 368 7.17e-15 78.6
Msa0842070 AT3G50240.2 26.786 224 134 6 400 601 26 241 2.95e-14 77.0
Msa0842070 AT3G50240.1 26.786 224 134 6 400 601 26 241 6.72e-14 75.9
Msa0842070 AT3G50240.4 26.786 224 134 6 400 601 26 241 6.77e-14 75.9
Msa0842070 AT5G42490.2 29.327 208 129 8 400 601 10 205 2.06e-13 74.3
Msa0842070 AT5G42490.1 29.327 208 129 8 400 601 10 205 2.08e-13 74.3
Msa0842070 AT3G43210.3 33.333 207 120 8 400 601 30 223 2.20e-13 73.9
Msa0842070 AT3G43210.5 33.333 207 120 8 400 601 30 223 2.20e-13 73.9
Msa0842070 AT3G43210.2 33.333 207 120 8 400 601 30 223 2.20e-13 73.9
Msa0842070 AT3G43210.4 33.333 207 120 8 400 601 30 223 2.20e-13 73.9
Msa0842070 AT3G43210.1 33.333 207 120 8 400 601 30 223 2.20e-13 73.9
Msa0842070 AT3G51150.1 29.187 209 130 6 400 601 18 215 2.36e-13 73.9
Msa0842070 AT5G66310.2 30.952 210 125 7 400 601 19 216 2.43e-13 73.9
Msa0842070 AT5G66310.3 30.952 210 125 7 400 601 19 216 2.43e-13 73.9
Msa0842070 AT5G66310.1 30.952 210 125 7 400 601 19 216 2.43e-13 73.9
Msa0842070 AT3G51150.2 29.187 209 130 6 400 601 18 215 2.47e-13 73.9
Msa0842070 AT3G51150.4 29.187 209 130 6 400 601 18 215 2.47e-13 73.9
Msa0842070 AT3G51150.3 29.187 209 130 6 400 601 18 215 2.47e-13 73.9
Msa0842070 AT1G01950.4 35.938 128 71 5 479 601 1 122 2.95e-11 67.0

Find 212 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGTTCTGCTTTGTTAAA+AGG 0.137796 5_4:-19008900 Msa0842070:three_prime_UTR
AGATGGATGCCTTGGAATTT+TGG 0.152963 5_4:-19012863 Msa0842070:CDS
GTTGAGATTATTAATGTAAA+TGG 0.154741 5_4:-19014453 Msa0842070:CDS
CTTCTTGATGCTTTGGGATT+AGG 0.163457 5_4:+19015188 None:intergenic
TAAACCATCTTATTTAATTC+AGG 0.204428 5_4:+19013326 None:intergenic
CAAACTTTGGCTTGTGGATT+TGG 0.226904 5_4:-19011005 Msa0842070:three_prime_UTR
ATAAGATTTGAGAGTTTAAA+TGG 0.237236 5_4:-19014197 Msa0842070:CDS
TTCTTGATGCTTTGGGATTA+GGG 0.242271 5_4:+19015189 None:intergenic
GTATCAATTTGCTTCTTAAC+AGG 0.277522 5_4:+19010481 None:intergenic
AACGTTTGCATCTTTGCTTA+TGG 0.282569 5_4:-19011699 Msa0842070:CDS
CTGAATCTTCTTGATGCTTT+GGG 0.284309 5_4:+19015182 None:intergenic
TGCATACCTTGATCATCTTT+TGG 0.289514 5_4:+19012793 None:intergenic
AGTTCAAAACTCATTCAAAA+TGG 0.289625 5_4:-19015109 Msa0842070:CDS
TTCACCAGATCTCAAAATTC+AGG 0.292712 5_4:-19015085 Msa0842070:intron
GTAACAACAGTTGCTGATAT+TGG 0.294895 5_4:-19008587 Msa0842070:three_prime_UTR
AACTGAAATGAGTAGGAAAA+TGG 0.302903 5_4:-19013744 Msa0842070:CDS
AGAAGCAATTATCAGTTTAC+AGG 0.305197 5_4:-19013513 Msa0842070:CDS
CCGTTGTCGTCCATTGAATA+AGG 0.307448 5_4:-19012935 Msa0842070:CDS
ACTGAATCTTCTTGATGCTT+TGG 0.308878 5_4:+19015181 None:intergenic
AAAGTAGTCACATTCCTTAT+AGG 0.311564 5_4:-19010868 Msa0842070:intron
AACCGATCTCTTTCTGCTCT+TGG 0.317036 5_4:-19010917 Msa0842070:three_prime_UTR
GACTAGAAATTGTAAAGAAA+TGG 0.330665 5_4:+19011157 None:intergenic
GAGAAACTTGTTTCTCTGAT+TGG 0.336888 5_4:+19010162 None:intergenic
ACTAGAAATTGTAAAGAAAT+GGG 0.338101 5_4:+19011158 None:intergenic
AGAATAGAGGTGTAAATTAC+AGG 0.339481 5_4:-19011632 Msa0842070:CDS
CTATCAAACGAATTTCAAAA+TGG 0.342077 5_4:-19015251 Msa0842070:exon
CTAGCTCTCTTATGAGATAA+AGG 0.344366 5_4:+19008693 None:intergenic
AGGTGTGGCCGCCACCTTTA+CGG 0.352301 5_4:+19009016 None:intergenic
CAGGTTCTCAGCTTGTTTCT+CGG 0.363391 5_4:+19013580 None:intergenic
TTGTTAGTGGGATCTGCATT+AGG 0.365227 5_4:-19014166 Msa0842070:CDS
ATGAACTTGATAAGAAGAAA+TGG 0.365625 5_4:-19013538 Msa0842070:CDS
ATTCAGCATGCTATGTATAA+TGG 0.369898 5_4:-19011068 Msa0842070:three_prime_UTR
CTGGCAGGTTCTATCTGAAT+TGG 0.375454 5_4:-19014303 Msa0842070:intron
TGCTTTGGGATTAGGGTTTG+TGG 0.377479 5_4:+19015196 None:intergenic
AAGCAGAACCTTGACTTATC+TGG 0.377957 5_4:+19008910 None:intergenic
AATTAATAGGTATACCTATA+AGG 0.378135 5_4:+19010854 None:intergenic
GACATTTCAACCTTATTCAA+TGG 0.382688 5_4:+19012925 None:intergenic
ATCTTTGCTTATGGACAAAC+AGG 0.385232 5_4:-19011690 Msa0842070:CDS
GCATTTGTTTAGAGTTAGTA+AGG 0.386562 5_4:-19011601 Msa0842070:CDS
ATGCAGATCCCACTAACAAC+TGG 0.391897 5_4:+19014170 None:intergenic
AAGAAACAAGTATTAATTAT+CGG 0.396195 5_4:+19011091 None:intergenic
ATGCGACTCTCAATATCATT+TGG 0.398877 5_4:+19008960 None:intergenic
CCGCACGAATGAGGCGATAG+TGG 0.400753 5_4:-19014580 Msa0842070:CDS
CTACGGGACCAACATCAAAA+AGG 0.402821 5_4:-19011500 Msa0842070:intron
GCTTTGGGATTAGGGTTTGT+GGG 0.404794 5_4:+19015197 None:intergenic
GCTTATGGACAAACAGGAAC+AGG 0.410003 5_4:-19011684 Msa0842070:CDS
AATCCCTGAATTAAATAAGA+TGG 0.412442 5_4:-19013330 Msa0842070:CDS
AAGGTTCTGCTTTGTTAAAA+GGG 0.417581 5_4:-19008899 Msa0842070:three_prime_UTR
CCGCCTAAAATTGTAAGAAC+TGG 0.418408 5_4:-19008756 Msa0842070:three_prime_UTR
CGGGCCACTGTGAAGGATGA+TGG 0.419376 5_4:-19014230 Msa0842070:CDS
TTGAACACCCTCATTCCTTT+CGG 0.419530 5_4:+19014429 None:intergenic
AAAGTATGAAAATAAGATAA+AGG 0.423243 5_4:-19013825 Msa0842070:CDS
GTGGATATTATCCTTTCCCT+TGG 0.424834 5_4:+19010250 None:intergenic
AGAGTGAGGGGCGTTGAGTT+AGG 0.425970 5_4:-19010505 Msa0842070:three_prime_UTR
TCACTTGATCAAGCTCCATC+TGG 0.426399 5_4:+19013714 None:intergenic
TTGAGATTATTAATGTAAAT+GGG 0.429309 5_4:-19014452 Msa0842070:CDS
CTTGCAAAACATTGAGAGTA+AGG 0.432710 5_4:-19010273 Msa0842070:three_prime_UTR
TTTACACCTCTATTCTGCTC+TGG 0.437914 5_4:+19011639 None:intergenic
AAACCATCTTATTTAATTCA+GGG 0.438958 5_4:+19013327 None:intergenic
GGAAGCAATGCTAGAGCAGT+TGG 0.441485 5_4:-19011241 Msa0842070:CDS
TGAAATTCGTTGGATTGAAT+CGG 0.445524 5_4:+19015226 None:intergenic
TCAATTATGTGAAAAGTTGA+AGG 0.451391 5_4:-19010141 Msa0842070:three_prime_UTR
CTTTGGCTTGTGGATTTGGC+AGG 0.451627 5_4:-19011001 Msa0842070:three_prime_UTR
ATCAATGGTAATCTCTGTGC+TGG 0.454206 5_4:-19011730 Msa0842070:CDS
AGCTAGCACAAGCAGAGATC+AGG 0.455058 5_4:-19008676 Msa0842070:three_prime_UTR
ATCTTCCTTTCTAAAAGATA+AGG 0.457713 5_4:-19009512 Msa0842070:intron
GGTTTATGCAGTACAGGAGT+TGG 0.461163 5_4:-19013309 Msa0842070:CDS
ATGTTGGTCCCGTAGCCAAT+AGG 0.464243 5_4:+19011508 None:intergenic
GTGGCGGCCACACCTGATAT+AGG 0.464738 5_4:-19009008 Msa0842070:three_prime_UTR
CTGCTGTACTCTTCAACATA+AGG 0.465376 5_4:-19010105 Msa0842070:intron
TGAACAAATCAGAGACCTAT+TGG 0.466284 5_4:-19011523 Msa0842070:CDS
CACTACAGCTGATTGATTGT+CGG 0.468814 5_4:-19014250 Msa0842070:CDS
GACAGCAAATTTCCAACAGA+AGG 0.470847 5_4:-19009779 Msa0842070:intron
GTTAAGAAGCAAATTGATAC+AGG 0.478187 5_4:-19010478 Msa0842070:three_prime_UTR
AGTGATTATGTCATATTGAA+TGG 0.478934 5_4:-19008456 Msa0842070:three_prime_UTR
GAAAAGATTAAAGAACTTGA+AGG 0.479522 5_4:-19010215 Msa0842070:three_prime_UTR
GGAATCCTTGCTAAAACAAC+AGG 0.479953 5_4:-19009343 Msa0842070:intron
ACTACAGCTGATTGATTGTC+GGG 0.480686 5_4:-19014249 Msa0842070:CDS
CACAAGCCAAAGTTTGCTCT+TGG 0.483420 5_4:+19011012 None:intergenic
TGTTTAGAGTTAGTAAGGAA+AGG 0.483579 5_4:-19011596 Msa0842070:CDS
TGGGTCATTGTGAAATTCGT+TGG 0.483777 5_4:+19015216 None:intergenic
AGCTGGGTGTACAACGGTTG+TGG 0.484316 5_4:-19012902 Msa0842070:CDS
GGGCCACTGTGAAGGATGAT+GGG 0.489671 5_4:-19014229 Msa0842070:CDS
TGAACTTGATAAGAAGAAAT+GGG 0.489705 5_4:-19013537 Msa0842070:CDS
GTTTATGCAGTACAGGAGTT+GGG 0.491474 5_4:-19013308 Msa0842070:intron
TAAGATGGTTTATGCAGTAC+AGG 0.497109 5_4:-19013315 Msa0842070:CDS
AATGGAAGCCCAGTTGTTAG+TGG 0.500095 5_4:-19014179 Msa0842070:CDS
CTGTTATGTTGAAGCCGTAA+AGG 0.501805 5_4:-19009030 Msa0842070:three_prime_UTR
TCAGAGTCTCACCGACATCC+TGG 0.502411 5_4:+19010548 None:intergenic
AATGAAGTTCAAGAGGCTAA+AGG 0.507487 5_4:-19013099 Msa0842070:intron
TTACATTCAATGAAATCGCT+TGG 0.510215 5_4:+19014015 None:intergenic
CGTGCAAGGAGAGCGACTTA+AGG 0.510478 5_4:-19010954 Msa0842070:three_prime_UTR
GTCACTTATGTTGTCAACCT+TGG 0.512217 5_4:+19011285 None:intergenic
ATGAAATCGCTTGGCACTGG+TGG 0.513500 5_4:+19014024 None:intergenic
GCAGCAAAAGATGGATGCCT+TGG 0.514816 5_4:-19012871 Msa0842070:CDS
GATTGAAATTCCTTCATCAC+AGG 0.517243 5_4:-19013977 Msa0842070:intron
TGTTTACATACAAGAAGAAA+AGG 0.517798 5_4:-19014406 Msa0842070:intron
AGGAGAGCGACAAAAGAGTC+AGG 0.520784 5_4:-19014146 Msa0842070:intron
TGAGAGAAAACTGAAAGAGC+AGG 0.520980 5_4:-19009376 Msa0842070:three_prime_UTR
TGATGAAGAGTGAGCAGTCT+CGG 0.521247 5_4:-19013385 Msa0842070:CDS
GACACATTCATGTGCTTCAA+AGG 0.521252 5_4:+19013358 None:intergenic
TCACCGACATCCTGGTCTGA+TGG 0.521468 5_4:+19010556 None:intergenic
AGAATTGAGAACCTTCCTCC+TGG 0.522164 5_4:-19014501 Msa0842070:CDS
AATAAGGTTGAAATGTCAGC+TGG 0.522417 5_4:-19012919 Msa0842070:CDS
GGAGGGGAAGCGACTAATGA+AGG 0.523992 5_4:-19014657 Msa0842070:CDS
ATCTATTAGAAATACTCCTC+AGG 0.524245 5_4:+19013561 None:intergenic
CTTATGTTGAAGAGTACAGC+AGG 0.525002 5_4:+19010106 None:intergenic
AATGTTTGTAAATGCGGGAG+GGG 0.526382 5_4:-19014673 Msa0842070:CDS
ACATTGAGAACAATTTAGTC+GGG 0.528952 5_4:-19008827 Msa0842070:three_prime_UTR
GACATTGAGAACAATTTAGT+CGG 0.530117 5_4:-19008828 Msa0842070:three_prime_UTR
GAAGGACCAGAGCAGAATAG+AGG 0.532529 5_4:-19011645 Msa0842070:CDS
GAGATAAAACAAAATTATGA+AGG 0.533866 5_4:-19011337 Msa0842070:CDS
AACATAGTAGTCGATCTCAT+TGG 0.535582 5_4:-19011201 Msa0842070:CDS
ATGTGTTACAAACCTTCTGT+TGG 0.538656 5_4:+19009767 None:intergenic
ATGGGGAAAATGCATTAGCT+TGG 0.541329 5_4:+19011176 None:intergenic
TCAATGAAATCGCTTGGCAC+TGG 0.541901 5_4:+19014021 None:intergenic
ACATTTAAGTCACTCACTAC+AGG 0.542756 5_4:-19013692 Msa0842070:intron
CGTCATTAACTGAAATGAGT+AGG 0.544840 5_4:-19013751 Msa0842070:CDS
CTCAGCAGATGAGAAACAAA+AGG 0.546632 5_4:-19008866 Msa0842070:three_prime_UTR
GCGACTAATGAAGGAGCTGA+TGG 0.551390 5_4:-19014648 Msa0842070:CDS
TTGGATATCTATGCAGCTGT+TGG 0.552000 5_4:-19014284 Msa0842070:CDS
ACACCTCTAACCTGTGATGA+AGG 0.552995 5_4:+19013967 None:intergenic
TTTGAGGTAGAGTATAATTG+TGG 0.553464 5_4:+19008433 None:intergenic
GATTTATCAGTCAGCTCGGG+TGG 0.554237 5_4:-19014538 Msa0842070:CDS
TAGACATACCTAGTGAGTCT+TGG 0.554882 5_4:+19010728 None:intergenic
CAAGATATTGTCCAGGAGGA+AGG 0.555315 5_4:+19014490 None:intergenic
TAATAATCTCAACAAAATGC+AGG 0.556051 5_4:+19014463 None:intergenic
GCTCTTCAATGAAGTTCAAG+AGG 0.556177 5_4:-19013106 Msa0842070:CDS
CAAGAGCAAACTTTGGCTTG+TGG 0.556310 5_4:-19011011 Msa0842070:three_prime_UTR
CATTTACTCCAAGACTCACT+AGG 0.556345 5_4:-19010736 Msa0842070:intron
CGTCGATTTATCAGTCAGCT+CGG 0.556612 5_4:-19014542 Msa0842070:CDS
CTCCAAGAGCAGAAAGAGAT+CGG 0.556711 5_4:+19010915 None:intergenic
CGACAATCAATCAGCTGTAG+TGG 0.559465 5_4:+19014251 None:intergenic
TGTGTAATGTTTGTAAATGC+GGG 0.560456 5_4:-19014678 Msa0842070:CDS
AATCAGAGACCTATTGGCTA+CGG 0.561642 5_4:-19011517 Msa0842070:CDS
TATACACCAAAAGATGATCA+AGG 0.562132 5_4:-19012799 Msa0842070:intron
AGCTGAAAGATCAGTTGCAA+GGG 0.562482 5_4:-19009546 Msa0842070:three_prime_UTR
GTGTGGACTGTACTGCAAGC+TGG 0.563345 5_4:-19011262 Msa0842070:CDS
CTAAAATTGTAAGAACTGGT+AGG 0.564054 5_4:-19008752 Msa0842070:three_prime_UTR
TCATCCATCACAAGAAAAGG+TGG 0.567849 5_4:+19008531 None:intergenic
TGAGAGTAAGGCCAAGGGAA+AGG 0.567887 5_4:-19010261 Msa0842070:three_prime_UTR
AGTGTACCAAGAGCAAACTT+TGG 0.568781 5_4:-19011018 Msa0842070:three_prime_UTR
ATGGAAGCCCAGTTGTTAGT+GGG 0.572521 5_4:-19014178 Msa0842070:CDS
ATCAGAGACCTATTGGCTAC+GGG 0.572963 5_4:-19011516 Msa0842070:CDS
TAACTTTGCAACTAGAGTGA+GGG 0.574352 5_4:-19010518 Msa0842070:three_prime_UTR
AAACATTGAGAGTAAGGCCA+AGG 0.574522 5_4:-19010267 Msa0842070:three_prime_UTR
GCTTTCTTCTAATTTCCTCA+AGG 0.574993 5_4:+19010295 None:intergenic
TTGGAGATTCATCACTTGTG+CGG 0.575327 5_4:+19008979 None:intergenic
ACAAGCAGAGATCAGGCTCA+AGG 0.578572 5_4:-19008669 Msa0842070:three_prime_UTR
GTCGATTTATCAGTCAGCTC+GGG 0.579050 5_4:-19014541 Msa0842070:CDS
TAAATGGGCCGAAAGGAATG+AGG 0.580606 5_4:-19014437 Msa0842070:CDS
GAAAGAGCAGGAGCAGAACT+CGG 0.583759 5_4:-19009364 Msa0842070:three_prime_UTR
ACAAAGAGCGAGAGCAACAG+TGG 0.585453 5_4:-19009064 Msa0842070:three_prime_UTR
ACGAATGAGGCGATAGTGGA+AGG 0.588795 5_4:-19014576 Msa0842070:CDS
ACAAATAAGTCCATCAGACC+AGG 0.589044 5_4:-19010566 Msa0842070:three_prime_UTR
CAATTATGTGAAAAGTTGAA+GGG 0.589053 5_4:-19010140 Msa0842070:three_prime_UTR
ACCTTGGCTTCTACAACACC+AGG 0.590292 5_4:+19011301 None:intergenic
CTAGAAATTGTAAAGAAATG+GGG 0.590501 5_4:+19011159 None:intergenic
AAGCTGAAAGATCAGTTGCA+AGG 0.592363 5_4:-19009547 Msa0842070:three_prime_UTR
TGTTGAAGCCGTAAAGGTGG+CGG 0.594372 5_4:-19009024 Msa0842070:three_prime_UTR
GTGTGTAATGTTTGTAAATG+CGG 0.597843 5_4:-19014679 Msa0842070:CDS
TTAACTTTGCAACTAGAGTG+AGG 0.598608 5_4:-19010519 Msa0842070:three_prime_UTR
GCATCAAGAAGATTCAGTAA+TGG 0.599731 5_4:-19015176 Msa0842070:CDS
TGATTGTCGGGCCACTGTGA+AGG 0.604540 5_4:-19014237 Msa0842070:CDS
GGAACTTGACTAGTAATGAC+CGG 0.608114 5_4:+19008714 None:intergenic
ATTAATCAAAAGCATATCAA+CGG 0.608149 5_4:-19015349 Msa0842070:five_prime_UTR
AGCCAGTTGCCAAAATTCCA+AGG 0.610337 5_4:+19012854 None:intergenic
CAAAAGAATGCTATGAGGCG+TGG 0.610480 5_4:-19013775 Msa0842070:CDS
AGGCTCAAGGAGTTAAAGAG+AGG 0.613323 5_4:-19008656 Msa0842070:three_prime_UTR
GAAGGACATCATCATGTACC+TGG 0.614193 5_4:-19011319 Msa0842070:CDS
ATTAATGTAAATGGGCCGAA+AGG 0.614341 5_4:-19014444 Msa0842070:CDS
CATATCTGTTAGTGTGCTCG+AGG 0.615354 5_4:-19011553 Msa0842070:CDS
TGCAGATCCCACTAACAACT+GGG 0.615645 5_4:+19014171 None:intergenic
GGCTCAAGGAGTTAAAGAGA+GGG 0.615879 5_4:-19008655 Msa0842070:three_prime_UTR
AGGTCAACAAGATATTGTCC+AGG 0.619450 5_4:+19014483 None:intergenic
AACTTTGCAACTAGAGTGAG+GGG 0.624205 5_4:-19010517 Msa0842070:three_prime_UTR
CTTGCAAAGACTGACGTGCA+AGG 0.625121 5_4:-19010968 Msa0842070:three_prime_UTR
AAAATCATTCAGATTTGACA+GGG 0.628273 5_4:-19012824 Msa0842070:CDS
CTATCACGTAAAGTGGATGA+CGG 0.629410 5_4:+19008801 None:intergenic
GCAAGGAGAGCGACTTAAGG+AGG 0.629473 5_4:-19010951 Msa0842070:three_prime_UTR
ATGGCAGATGAAGGAACTAG+AGG 0.629546 5_4:-19009093 Msa0842070:intron
ATGGTAATCTCTGTGCTGGA+TGG 0.630703 5_4:-19011726 Msa0842070:CDS
AGAAACAAGCTGAGAACCTG+AGG 0.634481 5_4:-19013577 Msa0842070:CDS
CAAAGCAAAAGAATGCTATG+AGG 0.636735 5_4:-19013780 Msa0842070:CDS
ACTTCAAAAGACAAAAGCAA+TGG 0.638216 5_4:-19010452 Msa0842070:intron
GGCCACTGTGAAGGATGATG+GGG 0.640167 5_4:-19014228 Msa0842070:CDS
ACCTGGTGTTGTAGAAGCCA+AGG 0.641911 5_4:-19011302 Msa0842070:CDS
GTAAACCGCCAGATAAGTCA+AGG 0.643578 5_4:-19008918 Msa0842070:three_prime_UTR
GAGCTGACTGATAAATCGAC+GGG 0.644570 5_4:+19014544 None:intergenic
CCACTATCGCCTCATTCGTG+CGG 0.646554 5_4:+19014580 None:intergenic
AGTCCATCAGACCAGGATGT+CGG 0.647343 5_4:-19010559 Msa0842070:three_prime_UTR
CAGAACCTTGACTTATCTGG+CGG 0.648706 5_4:+19008913 None:intergenic
CGAGCTGACTGATAAATCGA+CGG 0.648723 5_4:+19014543 None:intergenic
TTATGTTGAAGCCGTAAAGG+TGG 0.649045 5_4:-19009027 Msa0842070:three_prime_UTR
ATTTATCAGTCAGCTCGGGT+GGG 0.649156 5_4:-19014537 Msa0842070:CDS
TAGGCTAACAACAAAACCGC+CGG 0.653426 5_4:-19008733 Msa0842070:three_prime_UTR
AATGAGGCGATAGTGGAAGG+TGG 0.655012 5_4:-19014573 Msa0842070:CDS
TAATGTTTGTAAATGCGGGA+GGG 0.658002 5_4:-19014674 Msa0842070:CDS
AACATTGAGAGTAAGGCCAA+GGG 0.658460 5_4:-19010266 Msa0842070:three_prime_UTR
AACAAGCATAGAATCGAACA+AGG 0.667491 5_4:+19015138 None:intergenic
GTAATGTTTGTAAATGCGGG+AGG 0.668947 5_4:-19014675 Msa0842070:CDS
AAATGGGCCGAAAGGAATGA+GGG 0.671060 5_4:-19014436 Msa0842070:CDS
CCTTATTCAATGGACGACAA+CGG 0.673690 5_4:+19012935 None:intergenic
TTGACAACATAAGTGACGTG+TGG 0.675867 5_4:-19011279 Msa0842070:CDS
AGATGACGAGAAAGTGTGAG+CGG 0.681526 5_4:+19015298 None:intergenic
TCAACAAGATATTGTCCAGG+AGG 0.688741 5_4:+19014486 None:intergenic
GAAGTAAAGAAGAATCCTTG+AGG 0.717866 5_4:-19010310 Msa0842070:three_prime_UTR
ACTTGACTAGTAATGACCGG+CGG 0.732625 5_4:+19008717 None:intergenic
ATAAGGTTGAAATGTCAGCT+GGG 0.739136 5_4:-19012918 Msa0842070:CDS
TCACGTAAAGTGGATGACGG+TGG 0.739685 5_4:+19008804 None:intergenic
AATGTCAGCTGGGTGTACAA+CGG 0.751221 5_4:-19012908 Msa0842070:CDS
CACCCCATCATCCTTCACAG+TGG 0.762666 5_4:+19014226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTATTTTTAATAA+TGG - chr5_4:19011589-19011608 Msa0842070:CDS 0.0%
!!! TTTTTTTTTTAACTTTGATT+GGG + chr5_4:19008582-19008601 None:intergenic 10.0%
!!! ATTTTTTTTTTAACTTTGAT+TGG + chr5_4:19008583-19008602 None:intergenic 10.0%
!! TATCATTTATTATAATTCTT+AGG - chr5_4:19010091-19010110 Msa0842070:intron 10.0%
!! AATAAAAAAAAACTCAATAT+CGG + chr5_4:19011572-19011591 None:intergenic 10.0%
!!! TTATTTTTAATAATGGAAAA+AGG - chr5_4:19011596-19011615 Msa0842070:CDS 10.0%
!! AGTAAAAATCAAAAGTTAAA+CGG - chr5_4:19008163-19008182 Msa0842070:intron 15.0%
!!! AAAATGTTGGTAATTAAATT+AGG - chr5_4:19008655-19008674 Msa0842070:three_prime_UTR 15.0%
!!! AAATGTTGGTAATTAAATTA+GGG - chr5_4:19008656-19008675 Msa0842070:three_prime_UTR 15.0%
!! TAATTAAATTAGGGTTAATT+GGG - chr5_4:19008665-19008684 Msa0842070:three_prime_UTR 15.0%
!!! TTTTGATAAATTGTAAATCT+GGG - chr5_4:19008709-19008728 Msa0842070:three_prime_UTR 15.0%
!! TTGAGATTATTAATGTAAAT+GGG - chr5_4:19009086-19009105 Msa0842070:three_prime_UTR 15.0%
!! AAAGTATGAAAATAAGATAA+AGG - chr5_4:19009713-19009732 Msa0842070:intron 15.0%
!! AAAAAATATGTACAATTCTT+CGG + chr5_4:19010301-19010320 None:intergenic 15.0%
!!! GTACATATTTTTTTTAGTTT+TGG - chr5_4:19010308-19010327 Msa0842070:three_prime_UTR 15.0%
!!! TGGAATGTTTTAATTTTATA+GGG + chr5_4:19010871-19010890 None:intergenic 15.0%
!!! TTGGAATGTTTTAATTTTAT+AGG + chr5_4:19010872-19010891 None:intergenic 15.0%
!!! AATACCTATTTTTTAAAACA+GGG + chr5_4:19010902-19010921 None:intergenic 15.0%
!!! AAATACCTATTTTTTAAAAC+AGG + chr5_4:19010903-19010922 None:intergenic 15.0%
!! TACTATGTAAATTACAATAA+AGG - chr5_4:19011350-19011369 Msa0842070:intron 15.0%
!! TAAATTACAATAAAGGATAA+AGG - chr5_4:19011357-19011376 Msa0842070:intron 15.0%
!! AAATTACAATAAAGGATAAA+GGG - chr5_4:19011358-19011377 Msa0842070:intron 15.0%
!! ATTATGATTATTTACACAAT+TGG - chr5_4:19011727-19011746 Msa0842070:CDS 15.0%
!! AAGAAACAAGTATTAATTAT+CGG + chr5_4:19012450-19012469 None:intergenic 15.0%
!!! AAATTTAATACGTTTTAGTA+AGG + chr5_4:19013124-19013143 None:intergenic 15.0%
!!! TATAATTTTTTTAGCAACAT+TGG - chr5_4:19013498-19013517 Msa0842070:intron 15.0%
!! ATATTAATTAATAATTCACG+TGG - chr5_4:19014411-19014430 Msa0842070:CDS 15.0%
!! TACCTCAAAAATTATAATAT+GGG - chr5_4:19015119-19015138 Msa0842070:CDS 15.0%
!! TTTATGTATTTACATAATTC+AGG - chr5_4:19015249-19015268 Msa0842070:exon 15.0%
!!! ACATTAATCATTTTTTGAAA+AGG - chr5_4:19015281-19015300 Msa0842070:five_prime_UTR 15.0%
!!! ATTAATCAAAAGCATATCAA+CGG - chr5_4:19008189-19008208 Msa0842070:intron 20.0%
!! ACAATTATTGACAAAAATGT+TGG - chr5_4:19008642-19008661 Msa0842070:three_prime_UTR 20.0%
!! GTAATTAAATTAGGGTTAAT+TGG - chr5_4:19008664-19008683 Msa0842070:three_prime_UTR 20.0%
!! AATTAAATTAGGGTTAATTG+GGG - chr5_4:19008666-19008685 Msa0842070:three_prime_UTR 20.0%
!!! GTTTTGATAAATTGTAAATC+TGG - chr5_4:19008708-19008727 Msa0842070:three_prime_UTR 20.0%
!! GTTGAGATTATTAATGTAAA+TGG - chr5_4:19009085-19009104 Msa0842070:three_prime_UTR 20.0%
!! TTTAATTGTAATATTATGGC+TGG - chr5_4:19009216-19009235 Msa0842070:intron 20.0%
!! ATAAGATTTGAGAGTTTAAA+TGG - chr5_4:19009341-19009360 Msa0842070:intron 20.0%
!!! TTGTTTTTCCTGATTTTAAT+TGG - chr5_4:19009651-19009670 Msa0842070:intron 20.0%
!!! TTTATATGTTTCTTGTTTGA+AGG + chr5_4:19009882-19009901 None:intergenic 20.0%
!!! AAACCATCTTATTTAATTCA+GGG + chr5_4:19010214-19010233 None:intergenic 20.0%
!!! TAAACCATCTTATTTAATTC+AGG + chr5_4:19010215-19010234 None:intergenic 20.0%
!! TCGGTCTTAATTAATAAAAA+TGG + chr5_4:19010282-19010301 None:intergenic 20.0%
!! CAAGAATTATTATAAGTCAA+AGG - chr5_4:19010524-19010543 Msa0842070:three_prime_UTR 20.0%
!!! AAATCTGAATGATTTTTTAG+AGG + chr5_4:19010710-19010729 None:intergenic 20.0%
!! CATTGAAATATTCATTTCTT+AGG - chr5_4:19010927-19010946 Msa0842070:three_prime_UTR 20.0%
!! TGATAACAAGATGAAAATAA+TGG + chr5_4:19011101-19011120 None:intergenic 20.0%
!!! ACTTTGTTTTAAAGAAGATA+CGG - chr5_4:19011441-19011460 Msa0842070:intron 20.0%
!!! TTTAATAATGGAAAAAGGAT+AGG - chr5_4:19011601-19011620 Msa0842070:CDS 20.0%
!! AATGTGATTAGATTTGTAAA+TGG - chr5_4:19011640-19011659 Msa0842070:CDS 20.0%
!! CTAGTTTAACTATGAAAATA+TGG - chr5_4:19012139-19012158 Msa0842070:intron 20.0%
!! GAGATAAAACAAAATTATGA+AGG - chr5_4:19012201-19012220 Msa0842070:intron 20.0%
!! ACTAGAAATTGTAAAGAAAT+GGG + chr5_4:19012383-19012402 None:intergenic 20.0%
!! AAGACTAAAAATTTGATGAA+TGG - chr5_4:19012495-19012514 Msa0842070:intron 20.0%
!! AATTAATAGGTATACCTATA+AGG + chr5_4:19012687-19012706 None:intergenic 20.0%
!! TAACATTTACATATCAAGAT+TGG + chr5_4:19012732-19012751 None:intergenic 20.0%
!!! TTCATCAATGCTATTTTTTT+TGG - chr5_4:19012754-19012773 Msa0842070:intron 20.0%
!!! CTATTTTTTTTGGATATTTC+AGG - chr5_4:19012764-19012783 Msa0842070:intron 20.0%
!! TAGTTATAAATAAGTAGCAT+TGG - chr5_4:19013623-19013642 Msa0842070:intron 20.0%
!!! AATTTTTACCATTTTCTATC+TGG - chr5_4:19014363-19014382 Msa0842070:intron 20.0%
!! CTACCTCAAAAATTATAATA+TGG - chr5_4:19015118-19015137 Msa0842070:CDS 20.0%
!! AATTTCATTGTTATCAAAAG+AGG - chr5_4:19015309-19015328 Msa0842070:five_prime_UTR 20.0%
!!! GTTGATATGCTTTTGATTAA+TGG + chr5_4:19008190-19008209 None:intergenic 25.0%
! CTATCAAACGAATTTCAAAA+TGG - chr5_4:19008287-19008306 Msa0842070:intron 25.0%
! AGTTCAAAACTCATTCAAAA+TGG - chr5_4:19008429-19008448 Msa0842070:three_prime_UTR 25.0%
!!! GGGTTTTAGAATTATTGTTT+AGG - chr5_4:19008686-19008705 Msa0842070:three_prime_UTR 25.0%
!!! ATGTATATATTTTGAAGCAG+AGG - chr5_4:19008835-19008854 Msa0842070:three_prime_UTR 25.0%
! TAATAATCTCAACAAAATGC+AGG + chr5_4:19009078-19009097 None:intergenic 25.0%
! TGTTTACATACAAGAAGAAA+AGG - chr5_4:19009132-19009151 Msa0842070:intron 25.0%
!! TGAAGTGTCAAATATATCAT+AGG - chr5_4:19009617-19009636 Msa0842070:intron 25.0%
! GAAAGATTCCAATTAAAATC+AGG + chr5_4:19009662-19009681 None:intergenic 25.0%
! ATGAACTTGATAAGAAGAAA+TGG - chr5_4:19010000-19010019 Msa0842070:intron 25.0%
! TGAACTTGATAAGAAGAAAT+GGG - chr5_4:19010001-19010020 Msa0842070:intron 25.0%
! AATCCCTGAATTAAATAAGA+TGG - chr5_4:19010208-19010227 Msa0842070:three_prime_UTR 25.0%
! AAAAATCATTCAGATTTGAC+AGG - chr5_4:19010713-19010732 Msa0842070:intron 25.0%
! AAAATCATTCAGATTTGACA+GGG - chr5_4:19010714-19010733 Msa0842070:intron 25.0%
! ATTATTGTCATATTAGTTCG+CGG - chr5_4:19010812-19010831 Msa0842070:intron 25.0%
!!! TAGTCCCTGTTTTAAAAAAT+AGG - chr5_4:19010895-19010914 Msa0842070:three_prime_UTR 25.0%
! TGTCATAACGTTATATTTAC+AGG + chr5_4:19011033-19011052 None:intergenic 25.0%
! ATGAATGTTTGGTACAATTT+GGG + chr5_4:19011177-19011196 None:intergenic 25.0%
!!! GTATTATTTGATTTGCATTG+TGG + chr5_4:19011256-19011275 None:intergenic 25.0%
! ATTTAATAAATTTCACGCTC+TGG - chr5_4:19011276-19011295 Msa0842070:CDS 25.0%
! TTCCTTCAAATTCAATCTTA+TGG + chr5_4:19011403-19011422 None:intergenic 25.0%
! TAAGATTGAATTTGAAGGAA+TGG - chr5_4:19011403-19011422 Msa0842070:intron 25.0%
! AACAGGAAAAACATTTACTA+TGG - chr5_4:19011871-19011890 Msa0842070:intron 25.0%
! ATATTTCATTTGCAACAGTT+TGG - chr5_4:19012085-19012104 Msa0842070:intron 25.0%
!! GTTGTATCGAAATTGTTATT+AGG - chr5_4:19012175-19012194 Msa0842070:intron 25.0%
!! TATCGAAATTGTTATTAGGT+TGG - chr5_4:19012179-19012198 Msa0842070:intron 25.0%
! CTAGAAATTGTAAAGAAATG+GGG + chr5_4:19012382-19012401 None:intergenic 25.0%
! GACTAGAAATTGTAAAGAAA+TGG + chr5_4:19012384-19012403 None:intergenic 25.0%
! GACAGTAAAGAGTAATTAAT+AGG + chr5_4:19012700-19012719 None:intergenic 25.0%
! TTAATTACTCTTTACTGTCA+CGG - chr5_4:19012701-19012720 Msa0842070:intron 25.0%
! CAATATAATCCTACAAAAAC+TGG + chr5_4:19012885-19012904 None:intergenic 25.0%
!! CAGTTTTTGTAGGATTATAT+TGG - chr5_4:19012883-19012902 Msa0842070:CDS 25.0%
!! TCTTTTCTTGTAGATTTTTG+TGG + chr5_4:19013310-19013329 None:intergenic 25.0%
! GAAAAGATTAAAGAACTTGA+AGG - chr5_4:19013323-19013342 Msa0842070:CDS 25.0%
! TCAATTATGTGAAAAGTTGA+AGG - chr5_4:19013397-19013416 Msa0842070:intron 25.0%
! CAATTATGTGAAAAGTTGAA+GGG - chr5_4:19013398-19013417 Msa0842070:intron 25.0%
! AATAAAGAATTAGAGAAGAG+TGG + chr5_4:19013814-19013833 None:intergenic 25.0%
! CAATCATAAGATGCATATAT+TGG - chr5_4:19013863-19013882 Msa0842070:intron 25.0%
! TTTGACTGAAACAATTAGTT+TGG - chr5_4:19013907-19013926 Msa0842070:intron 25.0%
!! ATCTTCCTTTCTAAAAGATA+AGG - chr5_4:19014026-19014045 Msa0842070:CDS 25.0%
! GCTTCATATTATTTAGATCA+AGG - chr5_4:19014135-19014154 Msa0842070:intron 25.0%
!! CATTTTATGTAGTTCAAACT+CGG - chr5_4:19014598-19014617 Msa0842070:CDS 25.0%
! AGTGATTATGTCATATTGAA+TGG - chr5_4:19015082-19015101 Msa0842070:intron 25.0%
!! CACCCATATTATAATTTTTG+AGG + chr5_4:19015124-19015143 None:intergenic 25.0%
! CTCAAAAATTATAATATGGG+TGG - chr5_4:19015122-19015141 Msa0842070:CDS 25.0%
!! TTTAGAGTGGTCAAAATATA+GGG + chr5_4:19015205-19015224 None:intergenic 25.0%
!! ATTATTTAGTCACTTTAGAG+TGG + chr5_4:19015218-19015237 None:intergenic 25.0%
TGAAATTCGTTGGATTGAAT+CGG + chr5_4:19008315-19008334 None:intergenic 30.0%
AATATTCCAAGAATTGCGAA+AGG - chr5_4:19008761-19008780 Msa0842070:three_prime_UTR 30.0%
GTGTGTAATGTTTGTAAATG+CGG - chr5_4:19008859-19008878 Msa0842070:three_prime_UTR 30.0%
TGTGTAATGTTTGTAAATGC+GGG - chr5_4:19008860-19008879 Msa0842070:three_prime_UTR 30.0%
!!! ATGAGTGACACTTTTTTTGA+TGG - chr5_4:19008923-19008942 Msa0842070:three_prime_UTR 30.0%
!! GTTACTCAGCAATTTGTTAT+TGG - chr5_4:19009468-19009487 Msa0842070:intron 30.0%
TTACATTCAATGAAATCGCT+TGG + chr5_4:19009526-19009545 None:intergenic 30.0%
AACTGAAATGAGTAGGAAAA+TGG - chr5_4:19009794-19009813 Msa0842070:three_prime_UTR 30.0%
CACATTAATCTAACTGAGAA+AGG + chr5_4:19009920-19009939 None:intergenic 30.0%
ATCTATTAGAAATACTCCTC+AGG + chr5_4:19009980-19009999 None:intergenic 30.0%
AGAAGCAATTATCAGTTTAC+AGG - chr5_4:19010025-19010044 Msa0842070:intron 30.0%
CAGTTTACAGGAAAAAGTAA+AGG - chr5_4:19010037-19010056 Msa0842070:intron 30.0%
AGTAGTTTGAATCGTGTTAA+AGG - chr5_4:19010331-19010350 Msa0842070:three_prime_UTR 30.0%
GTAGTTTGAATCGTGTTAAA+GGG - chr5_4:19010332-19010351 Msa0842070:three_prime_UTR 30.0%
GACATTTCAACCTTATTCAA+TGG + chr5_4:19010616-19010635 None:intergenic 30.0%
TATACACCAAAAGATGATCA+AGG - chr5_4:19010739-19010758 Msa0842070:three_prime_UTR 30.0%
AGTTCGCGGAAATAAATATA+AGG - chr5_4:19010826-19010845 Msa0842070:intron 30.0%
! TTTAAAACAGGGACTAAACT+TGG + chr5_4:19010891-19010910 None:intergenic 30.0%
CTTTGCATCCTACAAAATTT+AGG + chr5_4:19011001-19011020 None:intergenic 30.0%
TTCAAAAACTCAAGTCACAA+GGG + chr5_4:19011072-19011091 None:intergenic 30.0%
ATTCAAAAACTCAAGTCACA+AGG + chr5_4:19011073-19011092 None:intergenic 30.0%
CATGAATGTTTGGTACAATT+TGG + chr5_4:19011178-19011197 None:intergenic 30.0%
CTCCATAAGATTGAATTTGA+AGG - chr5_4:19011398-19011417 Msa0842070:intron 30.0%
!!! GTTTTAAAGAAGATACGGAA+TGG - chr5_4:19011446-19011465 Msa0842070:intron 30.0%
AGAAACCCTTCTTCAAAAAA+AGG - chr5_4:19011471-19011490 Msa0842070:intron 30.0%
!!! CCATTCCTTTTTTTGAAGAA+GGG + chr5_4:19011479-19011498 None:intergenic 30.0%
!!! TCCATTCCTTTTTTTGAAGA+AGG + chr5_4:19011480-19011499 None:intergenic 30.0%
TCTACAACAACAATTCCATT+CGG + chr5_4:19011509-19011528 None:intergenic 30.0%
ATGGATAAATTAGTAACTGC+TGG - chr5_4:19011659-19011678 Msa0842070:CDS 30.0%
!! AAGTTTTCTAAGAACAGTGT+TGG - chr5_4:19011750-19011769 Msa0842070:CDS 30.0%
GGAAAAACATTTACTATGGA+AGG - chr5_4:19011875-19011894 Msa0842070:intron 30.0%
! AGAATAGAGGTGTAAATTAC+AGG - chr5_4:19011906-19011925 Msa0842070:intron 30.0%
! GCATTTGTTTAGAGTTAGTA+AGG - chr5_4:19011937-19011956 Msa0842070:intron 30.0%
! TGTTTAGAGTTAGTAAGGAA+AGG - chr5_4:19011942-19011961 Msa0842070:intron 30.0%
! AAAGGTTACCTTTTTGATGT+TGG + chr5_4:19012049-19012068 None:intergenic 30.0%
ATCAATGACAAACTCAACAA+AGG + chr5_4:19012067-19012086 None:intergenic 30.0%
ATTCAGCATGCTATGTATAA+TGG - chr5_4:19012470-19012489 Msa0842070:intron 30.0%
AAAGTAGTCACATTCCTTAT+AGG - chr5_4:19012670-19012689 Msa0842070:intron 30.0%
!! GTGTGTGTTGTTTATTTGTT+AGG - chr5_4:19012851-19012870 Msa0842070:CDS 30.0%
GTATGTTTGTATCATATTGC+AGG - chr5_4:19012922-19012941 Msa0842070:CDS 30.0%
! GTATCAATTTGCTTCTTAAC+AGG + chr5_4:19013060-19013079 None:intergenic 30.0%
GTTAAGAAGCAAATTGATAC+AGG - chr5_4:19013060-19013079 Msa0842070:intron 30.0%
ACTTCAAAAGACAAAAGCAA+TGG - chr5_4:19013086-19013105 Msa0842070:intron 30.0%
GAATTCTTCCTTATACACTT+TGG - chr5_4:19013175-19013194 Msa0842070:intron 30.0%
!! CGAGATTATTATTTGACTTG+TGG - chr5_4:19013469-19013488 Msa0842070:intron 30.0%
AAGACACATGCTTATATTGA+AGG - chr5_4:19013693-19013712 Msa0842070:CDS 30.0%
TTGTTTCAGTCAAACAAAGA+AGG + chr5_4:19013901-19013920 None:intergenic 30.0%
TTGTATGTTATTGCAGGTTT+GGG - chr5_4:19013957-19013976 Msa0842070:intron 30.0%
!! GACAACCTTATCTTTTAGAA+AGG + chr5_4:19014034-19014053 None:intergenic 30.0%
ATATTCTTTGCCGTTGTTAT+GGG - chr5_4:19014081-19014100 Msa0842070:intron 30.0%
CTCAAAATATCCCATAACAA+CGG + chr5_4:19014094-19014113 None:intergenic 30.0%
! TAGTACTCCTTTTCAATGTA+TGG + chr5_4:19014338-19014357 None:intergenic 30.0%
! AAGGTTCTGCTTTGTTAAAA+GGG - chr5_4:19014639-19014658 Msa0842070:CDS 30.0%
GACATTGAGAACAATTTAGT+CGG - chr5_4:19014710-19014729 Msa0842070:intron 30.0%
ACATTGAGAACAATTTAGTC+GGG - chr5_4:19014711-19014730 Msa0842070:intron 30.0%
! CATTTTTCTATCACGTAAAG+TGG + chr5_4:19014747-19014766 None:intergenic 30.0%
TACGTGATAGAAAAATGACA+AGG - chr5_4:19014750-19014769 Msa0842070:intron 30.0%
! CTACCAGTTCTTACAATTTT+AGG + chr5_4:19014788-19014807 None:intergenic 30.0%
CTAAAATTGTAAGAACTGGT+AGG - chr5_4:19014786-19014805 Msa0842070:intron 30.0%
GGGATAGTAAGAAAAAGATA+TGG - chr5_4:19014903-19014922 Msa0842070:intron 30.0%
GAAAAAGATATGGTCAAGAT+AGG - chr5_4:19014913-19014932 Msa0842070:intron 30.0%
! TTTTCATCCATCACAAGAAA+AGG + chr5_4:19015013-19015032 None:intergenic 30.0%
! TTTGAGGTAGAGTATAATTG+TGG + chr5_4:19015108-19015127 None:intergenic 30.0%
AAAATATAGGGAATAGATGG+AGG + chr5_4:19015193-19015212 None:intergenic 30.0%
GTCAAAATATAGGGAATAGA+TGG + chr5_4:19015196-19015215 None:intergenic 30.0%
!! CTTTAGAGTGGTCAAAATAT+AGG + chr5_4:19015206-19015225 None:intergenic 30.0%
!! TTCTTGATGCTTTGGGATTA+GGG + chr5_4:19008352-19008371 None:intergenic 35.0%
CTGAATCTTCTTGATGCTTT+GGG + chr5_4:19008359-19008378 None:intergenic 35.0%
ACTGAATCTTCTTGATGCTT+TGG + chr5_4:19008360-19008379 None:intergenic 35.0%
GCATCAAGAAGATTCAGTAA+TGG - chr5_4:19008362-19008381 Msa0842070:intron 35.0%
AACAAGCATAGAATCGAACA+AGG + chr5_4:19008403-19008422 None:intergenic 35.0%
TTCACCAGATCTCAAAATTC+AGG - chr5_4:19008453-19008472 Msa0842070:three_prime_UTR 35.0%
!!! CTAACCTGAATTTTGAGATC+TGG + chr5_4:19008460-19008479 None:intergenic 35.0%
GGAATTGTACTTAGAAAGAG+GGG + chr5_4:19008561-19008580 None:intergenic 35.0%
GGGAATTGTACTTAGAAAGA+GGG + chr5_4:19008562-19008581 None:intergenic 35.0%
TGGGAATTGTACTTAGAAAG+AGG + chr5_4:19008563-19008582 None:intergenic 35.0%
TTAAGTCCTTTCGCAATTCT+TGG + chr5_4:19008770-19008789 None:intergenic 35.0%
TAATGTTTGTAAATGCGGGA+GGG - chr5_4:19008864-19008883 Msa0842070:three_prime_UTR 35.0%
!!! AGTGACACTTTTTTTGATGG+TGG - chr5_4:19008926-19008945 Msa0842070:three_prime_UTR 35.0%
ATTAATGTAAATGGGCCGAA+AGG - chr5_4:19009094-19009113 Msa0842070:intron 35.0%
ATTGTAATATTATGGCTGGC+AGG - chr5_4:19009220-19009239 Msa0842070:intron 35.0%
!!! TGCTTGATTAGTTTTTCCAG+TGG - chr5_4:19009438-19009457 Msa0842070:intron 35.0%
!! CAGCAATTTGTTATTGGCTA+CGG - chr5_4:19009474-19009493 Msa0842070:intron 35.0%
GATTGAAATTCCTTCATCAC+AGG - chr5_4:19009561-19009580 Msa0842070:three_prime_UTR 35.0%
CAAAGCAAAAGAATGCTATG+AGG - chr5_4:19009758-19009777 Msa0842070:intron 35.0%
CGTCATTAACTGAAATGAGT+AGG - chr5_4:19009787-19009806 Msa0842070:three_prime_UTR 35.0%
GAAAATGGAAAAAGTCCAGA+TGG - chr5_4:19009809-19009828 Msa0842070:three_prime_UTR 35.0%
ACATTTAAGTCACTCACTAC+AGG - chr5_4:19009846-19009865 Msa0842070:intron 35.0%
TAAGATGGTTTATGCAGTAC+AGG - chr5_4:19010223-19010242 Msa0842070:three_prime_UTR 35.0%
AATGAAGTTCAAGAGGCTAA+AGG - chr5_4:19010439-19010458 Msa0842070:intron 35.0%
TGCTTCTGTTATGAAAACAC+AGG - chr5_4:19010562-19010581 Msa0842070:three_prime_UTR 35.0%
GCTTCTGTTATGAAAACACA+GGG - chr5_4:19010563-19010582 Msa0842070:three_prime_UTR 35.0%
AATAAGGTTGAAATGTCAGC+TGG - chr5_4:19010619-19010638 Msa0842070:intron 35.0%
ATAAGGTTGAAATGTCAGCT+GGG - chr5_4:19010620-19010639 Msa0842070:intron 35.0%
!! GATTTTGATGCAGCAAAAGA+TGG - chr5_4:19010658-19010677 Msa0842070:intron 35.0%
! TGCATACCTTGATCATCTTT+TGG + chr5_4:19010748-19010767 None:intergenic 35.0%
CACCTATTTGGAGGATTAAT+AGG + chr5_4:19010953-19010972 None:intergenic 35.0%
TTCCATGTGTAGTCACTATT+TGG + chr5_4:19010976-19010995 None:intergenic 35.0%
AAATAGTGACTACACATGGA+AGG - chr5_4:19010975-19010994 Msa0842070:three_prime_UTR 35.0%
! ATGGAAGGCCTAAATTTTGT+AGG - chr5_4:19010990-19011009 Msa0842070:three_prime_UTR 35.0%
!! AGGTTTTGTGCATGAATGTT+TGG + chr5_4:19011188-19011207 None:intergenic 35.0%
TTTGAAGGAATGGAGAAATG+AGG - chr5_4:19011413-19011432 Msa0842070:intron 35.0%
CCCTTCTTCAAAAAAAGGAA+TGG - chr5_4:19011476-19011495 Msa0842070:intron 35.0%
! ACTCAATATCGGTTACTGAA+CGG + chr5_4:19011561-19011580 None:intergenic 35.0%
! TTTTGCTGATGCATCATCAA+TGG - chr5_4:19011793-19011812 Msa0842070:intron 35.0%
AACGTTTGCATCTTTGCTTA+TGG - chr5_4:19011839-19011858 Msa0842070:intron 35.0%
ATCTTTGCTTATGGACAAAC+AGG - chr5_4:19011848-19011867 Msa0842070:intron 35.0%
TGAACAAATCAGAGACCTAT+TGG - chr5_4:19012015-19012034 Msa0842070:intron 35.0%
AACATAGTAGTCGATCTCAT+TGG - chr5_4:19012337-19012356 Msa0842070:intron 35.0%
!!! ACTACTTTTTGCAGCTAAAG+CGG + chr5_4:19012658-19012677 None:intergenic 35.0%
AACAACACACACAAAGAAAG+CGG + chr5_4:19012843-19012862 None:intergenic 35.0%
! GAGTAAGATCCAGTTTTTGT+AGG - chr5_4:19012873-19012892 Msa0842070:CDS 35.0%
TGTTTGTATCATATTGCAGG+AGG - chr5_4:19012925-19012944 Msa0842070:CDS 35.0%
TTAACTTTGCAACTAGAGTG+AGG - chr5_4:19013019-19013038 Msa0842070:intron 35.0%
TAACTTTGCAACTAGAGTGA+GGG - chr5_4:19013020-19013039 Msa0842070:intron 35.0%
CAAAAGACAAAAGCAATGGT+AGG - chr5_4:19013090-19013109 Msa0842070:intron 35.0%
AAGCTATGCCAAAGTGTATA+AGG + chr5_4:19013186-19013205 None:intergenic 35.0%
GAAGTAAAGAAGAATCCTTG+AGG - chr5_4:19013228-19013247 Msa0842070:intron 35.0%
GCTTTCTTCTAATTTCCTCA+AGG + chr5_4:19013246-19013265 None:intergenic 35.0%
CTTGCAAAACATTGAGAGTA+AGG - chr5_4:19013265-19013284 Msa0842070:intron 35.0%
!!! TTTCTCTGATTGGTTTTGCA+TGG + chr5_4:19013369-19013388 None:intergenic 35.0%
! GAGAAACTTGTTTCTCTGAT+TGG + chr5_4:19013379-19013398 None:intergenic 35.0%
! TTGGTTGTGTATCATGGTTT+TGG - chr5_4:19013517-19013536 Msa0842070:CDS 35.0%
!! TGGTTCCTTGCTTTTGTTAT+TGG - chr5_4:19013643-19013662 Msa0842070:intron 35.0%
!!! GGTTCCTTGCTTTTGTTATT+GGG - chr5_4:19013644-19013663 Msa0842070:intron 35.0%
ATGTGTTACAAACCTTCTGT+TGG + chr5_4:19013774-19013793 None:intergenic 35.0%
AAAGAATTAGAGAAGAGTGG+AGG + chr5_4:19013811-19013830 None:intergenic 35.0%
! TGTTCTTCATGCTAAGGTTT+TGG + chr5_4:19013841-19013860 None:intergenic 35.0%
ATTGCATGTTCTTCATGCTA+AGG + chr5_4:19013847-19013866 None:intergenic 35.0%
CAGTTCTTGTATGTTATTGC+AGG - chr5_4:19013951-19013970 Msa0842070:intron 35.0%
CTTGTATGTTATTGCAGGTT+TGG - chr5_4:19013956-19013975 Msa0842070:intron 35.0%
GATATTCTTTGCCGTTGTTA+TGG - chr5_4:19014080-19014099 Msa0842070:intron 35.0%
GAAGCGATGAACATAAAAAG+AGG + chr5_4:19014120-19014139 None:intergenic 35.0%
!!! TAGTACCTGTTGTTTTAGCA+AGG + chr5_4:19014203-19014222 None:intergenic 35.0%
! ACTCCTTTTCAATGTATGGA+GGG + chr5_4:19014334-19014353 None:intergenic 35.0%
! TACTCCTTTTCAATGTATGG+AGG + chr5_4:19014335-19014354 None:intergenic 35.0%
CAAAGATGCCAGATAGAAAA+TGG + chr5_4:19014374-19014393 None:intergenic 35.0%
ATGCGACTCTCAATATCATT+TGG + chr5_4:19014581-19014600 None:intergenic 35.0%
! CAAGGTTCTGCTTTGTTAAA+AGG - chr5_4:19014638-19014657 Msa0842070:CDS 35.0%
! CCAGTTCTTACAATTTTAGG+CGG + chr5_4:19014785-19014804 None:intergenic 35.0%
! CTAGCTCTCTTATGAGATAA+AGG + chr5_4:19014848-19014867 None:intergenic 35.0%
GTAACAACAGTTGCTGATAT+TGG - chr5_4:19014951-19014970 Msa0842070:intron 35.0%
TGGGTCATTGTGAAATTCGT+TGG + chr5_4:19008325-19008344 None:intergenic 40.0%
!! CTTCTTGATGCTTTGGGATT+AGG + chr5_4:19008353-19008372 None:intergenic 40.0%
GTAATGTTTGTAAATGCGGG+AGG - chr5_4:19008863-19008882 Msa0842070:three_prime_UTR 40.0%
AATGTTTGTAAATGCGGGAG+GGG - chr5_4:19008865-19008884 Msa0842070:three_prime_UTR 40.0%
TCAACAAGATATTGTCCAGG+AGG + chr5_4:19009055-19009074 None:intergenic 40.0%
AGGTCAACAAGATATTGTCC+AGG + chr5_4:19009058-19009077 None:intergenic 40.0%
TTGAACACCCTCATTCCTTT+CGG + chr5_4:19009112-19009131 None:intergenic 40.0%
TTGGATATCTATGCAGCTGT+TGG - chr5_4:19009254-19009273 Msa0842070:intron 40.0%
CACTACAGCTGATTGATTGT+CGG - chr5_4:19009288-19009307 Msa0842070:intron 40.0%
ACTACAGCTGATTGATTGTC+GGG - chr5_4:19009289-19009308 Msa0842070:intron 40.0%
TTGTTAGTGGGATCTGCATT+AGG - chr5_4:19009372-19009391 Msa0842070:three_prime_UTR 40.0%
CTGAGTAACTTCAATACCAC+TGG + chr5_4:19009457-19009476 None:intergenic 40.0%
ATTCCTTCATCACAGGTTAG+AGG - chr5_4:19009568-19009587 Msa0842070:three_prime_UTR 40.0%
TCAAACAGCCACATATCAAC+TGG + chr5_4:19009600-19009619 None:intergenic 40.0%
GACACATTCATGTGCTTCAA+AGG + chr5_4:19010183-19010202 None:intergenic 40.0%
GTTTATGCAGTACAGGAGTT+GGG - chr5_4:19010230-19010249 Msa0842070:three_prime_UTR 40.0%
GCTCTTCAATGAAGTTCAAG+AGG - chr5_4:19010432-19010451 Msa0842070:intron 40.0%
CCTTATTCAATGGACGACAA+CGG + chr5_4:19010606-19010625 None:intergenic 40.0%
! AGATGGATGCCTTGGAATTT+TGG - chr5_4:19010675-19010694 Msa0842070:intron 40.0%
GGCCTATTAATCCTCCAAAT+AGG - chr5_4:19010948-19010967 Msa0842070:three_prime_UTR 40.0%
ACTATTTGGCACCTATTTGG+AGG + chr5_4:19010962-19010981 None:intergenic 40.0%
GTCACTATTTGGCACCTATT+TGG + chr5_4:19010965-19010984 None:intergenic 40.0%
TGCCAAATAGTGACTACACA+TGG - chr5_4:19010971-19010990 Msa0842070:three_prime_UTR 40.0%
TAAATTTCACGCTCTGGCAA+AGG - chr5_4:19011282-19011301 Msa0842070:CDS 40.0%
AAATTTCACGCTCTGGCAAA+GGG - chr5_4:19011283-19011302 Msa0842070:CDS 40.0%
AGGAATGGAGAAAAACCGAA+TGG - chr5_4:19011491-19011510 Msa0842070:intron 40.0%
! CTCAATATCGGTTACTGAAC+GGG + chr5_4:19011560-19011579 None:intergenic 40.0%
ATCAATGGTAATCTCTGTGC+TGG - chr5_4:19011808-19011827 Msa0842070:intron 40.0%
TTTACACCTCTATTCTGCTC+TGG + chr5_4:19011902-19011921 None:intergenic 40.0%
! AATCAGAGACCTATTGGCTA+CGG - chr5_4:19012021-19012040 Msa0842070:intron 40.0%
GTCACTTATGTTGTCAACCT+TGG + chr5_4:19012256-19012275 None:intergenic 40.0%
TTGACAACATAAGTGACGTG+TGG - chr5_4:19012259-19012278 Msa0842070:intron 40.0%
ATGGGGAAAATGCATTAGCT+TGG + chr5_4:19012365-19012384 None:intergenic 40.0%
AGTGTACCAAGAGCAAACTT+TGG - chr5_4:19012520-19012539 Msa0842070:intron 40.0%
!! CAAACTTTGGCTTGTGGATT+TGG - chr5_4:19012533-19012552 Msa0842070:intron 40.0%
CATTTACTCCAAGACTCACT+AGG - chr5_4:19012802-19012821 Msa0842070:CDS 40.0%
TAGACATACCTAGTGAGTCT+TGG + chr5_4:19012813-19012832 None:intergenic 40.0%
ACAAATAAGTCCATCAGACC+AGG - chr5_4:19012972-19012991 Msa0842070:intron 40.0%
AACTTTGCAACTAGAGTGAG+GGG - chr5_4:19013021-19013040 Msa0842070:intron 40.0%
AAACATTGAGAGTAAGGCCA+AGG - chr5_4:19013271-19013290 Msa0842070:intron 40.0%
AACATTGAGAGTAAGGCCAA+GGG - chr5_4:19013272-19013291 Msa0842070:intron 40.0%
GTGGATATTATCCTTTCCCT+TGG + chr5_4:19013291-19013310 None:intergenic 40.0%
!! TGGATGTTTTGAGCTCAATC+TGG + chr5_4:19013349-19013368 None:intergenic 40.0%
! CTTATGTTGAAGAGTACAGC+AGG + chr5_4:19013435-19013454 None:intergenic 40.0%
CTGCTGTACTCTTCAACATA+AGG - chr5_4:19013433-19013452 Msa0842070:intron 40.0%
! GCAACATTGGTTGTGTATCA+TGG - chr5_4:19013511-19013530 Msa0842070:CDS 40.0%
!!! TCCTTGCTTTTGTTATTGGG+TGG - chr5_4:19013647-19013666 Msa0842070:intron 40.0%
!!! CCTTGCTTTTGTTATTGGGT+GGG - chr5_4:19013648-19013667 Msa0842070:intron 40.0%
GACAGCAAATTTCCAACAGA+AGG - chr5_4:19013759-19013778 Msa0842070:CDS 40.0%
AAGCTGAAAGATCAGTTGCA+AGG - chr5_4:19013991-19014010 Msa0842070:CDS 40.0%
AGCTGAAAGATCAGTTGCAA+GGG - chr5_4:19013992-19014011 Msa0842070:CDS 40.0%
TGAGAGAAAACTGAAAGAGC+AGG - chr5_4:19014162-19014181 Msa0842070:CDS 40.0%
GGAATCCTTGCTAAAACAAC+AGG - chr5_4:19014195-19014214 Msa0842070:CDS 40.0%
! CTCCTTTTCAATGTATGGAG+GGG + chr5_4:19014333-19014352 None:intergenic 40.0%
CTGTTATGTTGAAGCCGTAA+AGG - chr5_4:19014508-19014527 Msa0842070:CDS 40.0%
TTATGTTGAAGCCGTAAAGG+TGG - chr5_4:19014511-19014530 Msa0842070:CDS 40.0%
! GCTTTTACCTATATCAGGTG+TGG + chr5_4:19014540-19014559 None:intergenic 40.0%
TTGGAGATTCATCACTTGTG+CGG + chr5_4:19014562-19014581 None:intergenic 40.0%
AAGCAGAACCTTGACTTATC+TGG + chr5_4:19014631-19014650 None:intergenic 40.0%
CTCAGCAGATGAGAAACAAA+AGG - chr5_4:19014672-19014691 Msa0842070:CDS 40.0%
CTATCACGTAAAGTGGATGA+CGG + chr5_4:19014740-19014759 None:intergenic 40.0%
CCGCCTAAAATTGTAAGAAC+TGG - chr5_4:19014782-19014801 Msa0842070:intron 40.0%
GGAACTTGACTAGTAATGAC+CGG + chr5_4:19014827-19014846 None:intergenic 40.0%
! ATCTCCACCTTTTCTTGTGA+TGG - chr5_4:19015003-19015022 Msa0842070:intron 40.0%
TCATCCATCACAAGAAAAGG+TGG + chr5_4:19015010-19015029 None:intergenic 40.0%
ACTCACTCATGATACTGTCA+CGG + chr5_4:19015353-19015372 None:intergenic 40.0%
! AGATGACGAGAAAGTGTGAG+CGG + chr5_4:19008243-19008262 None:intergenic 45.0%
!! GCTTTGGGATTAGGGTTTGT+GGG + chr5_4:19008344-19008363 None:intergenic 45.0%
!! TGCTTTGGGATTAGGGTTTG+TGG + chr5_4:19008345-19008364 None:intergenic 45.0%
! CAATGTTTTCCGCACGAATG+AGG - chr5_4:19008949-19008968 Msa0842070:three_prime_UTR 45.0%
GAGCTGACTGATAAATCGAC+GGG + chr5_4:19008997-19009016 None:intergenic 45.0%
CGAGCTGACTGATAAATCGA+CGG + chr5_4:19008998-19009017 None:intergenic 45.0%
!! CGTCGATTTATCAGTCAGCT+CGG - chr5_4:19008996-19009015 Msa0842070:three_prime_UTR 45.0%
! GTCGATTTATCAGTCAGCTC+GGG - chr5_4:19008997-19009016 Msa0842070:three_prime_UTR 45.0%
ATTTATCAGTCAGCTCGGGT+GGG - chr5_4:19009001-19009020 Msa0842070:three_prime_UTR 45.0%
AGAATTGAGAACCTTCCTCC+TGG - chr5_4:19009037-19009056 Msa0842070:three_prime_UTR 45.0%
CAAGATATTGTCCAGGAGGA+AGG + chr5_4:19009051-19009070 None:intergenic 45.0%
TAAATGGGCCGAAAGGAATG+AGG - chr5_4:19009101-19009120 Msa0842070:intron 45.0%
AAATGGGCCGAAAGGAATGA+GGG - chr5_4:19009102-19009121 Msa0842070:intron 45.0%
CTGGCAGGTTCTATCTGAAT+TGG - chr5_4:19009235-19009254 Msa0842070:intron 45.0%
CGACAATCAATCAGCTGTAG+TGG + chr5_4:19009290-19009309 None:intergenic 45.0%
AATGGAAGCCCAGTTGTTAG+TGG - chr5_4:19009359-19009378 Msa0842070:three_prime_UTR 45.0%
ATGGAAGCCCAGTTGTTAGT+GGG - chr5_4:19009360-19009379 Msa0842070:three_prime_UTR 45.0%
TGCAGATCCCACTAACAACT+GGG + chr5_4:19009370-19009389 None:intergenic 45.0%
ATGCAGATCCCACTAACAAC+TGG + chr5_4:19009371-19009390 None:intergenic 45.0%
TCAATGAAATCGCTTGGCAC+TGG + chr5_4:19009520-19009539 None:intergenic 45.0%
ACACCTCTAACCTGTGATGA+AGG + chr5_4:19009574-19009593 None:intergenic 45.0%
! GGTGTACACCAGTTGATATG+TGG - chr5_4:19009589-19009608 Msa0842070:intron 45.0%
CAAAAGAATGCTATGAGGCG+TGG - chr5_4:19009763-19009782 Msa0842070:intron 45.0%
TCACTTGATCAAGCTCCATC+TGG + chr5_4:19009827-19009846 None:intergenic 45.0%
! CACTCACTACAGGTATTGCA+CGG - chr5_4:19009856-19009875 Msa0842070:intron 45.0%
! CAGGTTCTCAGCTTGTTTCT+CGG + chr5_4:19009961-19009980 None:intergenic 45.0%
AGAAACAAGCTGAGAACCTG+AGG - chr5_4:19009961-19009980 Msa0842070:intron 45.0%
TGATGAAGAGTGAGCAGTCT+CGG - chr5_4:19010153-19010172 Msa0842070:three_prime_UTR 45.0%
GGTTTATGCAGTACAGGAGT+TGG - chr5_4:19010229-19010248 Msa0842070:three_prime_UTR 45.0%
CCGTTGTCGTCCATTGAATA+AGG - chr5_4:19010603-19010622 Msa0842070:intron 45.0%
AATGTCAGCTGGGTGTACAA+CGG - chr5_4:19010630-19010649 Msa0842070:intron 45.0%
!! TGCCTTGGAATTTTGGCAAC+TGG - chr5_4:19010682-19010701 Msa0842070:intron 45.0%
AGCCAGTTGCCAAAATTCCA+AGG + chr5_4:19010687-19010706 None:intergenic 45.0%
!! TGTGAAGGATGGATTGTGCA+GGG + chr5_4:19011144-19011163 None:intergenic 45.0%
!! ATGTGAAGGATGGATTGTGC+AGG + chr5_4:19011145-19011164 None:intergenic 45.0%
GATTGTGAGCATGTGAAGGA+TGG + chr5_4:19011155-19011174 None:intergenic 45.0%
TTGGGATTGTGAGCATGTGA+AGG + chr5_4:19011159-19011178 None:intergenic 45.0%
! TTAGTGAGCCACATTTGCTG+TGG + chr5_4:19011229-19011248 None:intergenic 45.0%
AATTTCACGCTCTGGCAAAG+GGG - chr5_4:19011284-19011303 Msa0842070:CDS 45.0%
! AATATCGGTTACTGAACGGG+AGG + chr5_4:19011557-19011576 None:intergenic 45.0%
ATGGTAATCTCTGTGCTGGA+TGG - chr5_4:19011812-19011831 Msa0842070:intron 45.0%
GCTTATGGACAAACAGGAAC+AGG - chr5_4:19011854-19011873 Msa0842070:intron 45.0%
CATATCTGTTAGTGTGCTCG+AGG - chr5_4:19011985-19012004 Msa0842070:intron 45.0%
! ATCAGAGACCTATTGGCTAC+GGG - chr5_4:19012022-19012041 Msa0842070:intron 45.0%
CTACGGGACCAACATCAAAA+AGG - chr5_4:19012038-19012057 Msa0842070:intron 45.0%
GAAGGACATCATCATGTACC+TGG - chr5_4:19012219-19012238 Msa0842070:intron 45.0%
! CACAAGCCAAAGTTTGCTCT+TGG + chr5_4:19012529-19012548 None:intergenic 45.0%
!! CAAGAGCAAACTTTGGCTTG+TGG - chr5_4:19012527-19012546 Msa0842070:intron 45.0%
AACCGATCTCTTTCTGCTCT+TGG - chr5_4:19012621-19012640 Msa0842070:intron 45.0%
CTCCAAGAGCAGAAAGAGAT+CGG + chr5_4:19012626-19012645 None:intergenic 45.0%
CCCACCCAATAACAAAAGCA+AGG + chr5_4:19013651-19013670 None:intergenic 45.0%
CAAGCTTATCACGAGTGAAG+TGG - chr5_4:19014272-19014291 Msa0842070:CDS 45.0%
CTCCCCTCCATACATTGAAA+AGG - chr5_4:19014328-19014347 Msa0842070:intron 45.0%
ACATGTGTCATGGCAGATGA+AGG - chr5_4:19014436-19014455 Msa0842070:CDS 45.0%
ATGGCAGATGAAGGAACTAG+AGG - chr5_4:19014445-19014464 Msa0842070:CDS 45.0%
! GTGCGGCTTTTACCTATATC+AGG + chr5_4:19014545-19014564 None:intergenic 45.0%
GTAAACCGCCAGATAAGTCA+AGG - chr5_4:19014620-19014639 Msa0842070:CDS 45.0%
CAGAACCTTGACTTATCTGG+CGG + chr5_4:19014628-19014647 None:intergenic 45.0%
TAGGCTAACAACAAAACCGC+CGG - chr5_4:19014805-19014824 Msa0842070:intron 45.0%
ACTTGACTAGTAATGACCGG+CGG + chr5_4:19014824-19014843 None:intergenic 45.0%
AGGCTCAAGGAGTTAAAGAG+AGG - chr5_4:19014882-19014901 Msa0842070:intron 45.0%
GGCTCAAGGAGTTAAAGAGA+GGG - chr5_4:19014883-19014902 Msa0842070:intron 45.0%
!!! ATTTTTTAATTGTAATATTA+TGG - chr5_4:19009212-19009231 Msa0842070:intron 5.0%
GCGACTAATGAAGGAGCTGA+TGG - chr5_4:19008890-19008909 Msa0842070:three_prime_UTR 50.0%
!! ACGAATGAGGCGATAGTGGA+AGG - chr5_4:19008962-19008981 Msa0842070:three_prime_UTR 50.0%
!! AATGAGGCGATAGTGGAAGG+TGG - chr5_4:19008965-19008984 Msa0842070:three_prime_UTR 50.0%
GATTTATCAGTCAGCTCGGG+TGG - chr5_4:19009000-19009019 Msa0842070:three_prime_UTR 50.0%
AGGAGAGCGACAAAAGAGTC+AGG - chr5_4:19009392-19009411 Msa0842070:intron 50.0%
! ATGAAATCGCTTGGCACTGG+TGG + chr5_4:19009517-19009536 None:intergenic 50.0%
GCAGCAAAAGATGGATGCCT+TGG - chr5_4:19010667-19010686 Msa0842070:intron 50.0%
!! TGGATTGTGCAGGGGTATCA+AGG + chr5_4:19011135-19011154 None:intergenic 50.0%
!! GTGAAGGATGGATTGTGCAG+GGG + chr5_4:19011143-19011162 None:intergenic 50.0%
GAAGGACCAGAGCAGAATAG+AGG - chr5_4:19011893-19011912 Msa0842070:intron 50.0%
ATGTTGGTCCCGTAGCCAAT+AGG + chr5_4:19012033-19012052 None:intergenic 50.0%
!! ACCTGGTGTTGTAGAAGCCA+AGG - chr5_4:19012236-19012255 Msa0842070:intron 50.0%
ACCTTGGCTTCTACAACACC+AGG + chr5_4:19012240-19012259 None:intergenic 50.0%
GGAAGCAATGCTAGAGCAGT+TGG - chr5_4:19012297-19012316 Msa0842070:intron 50.0%
!! CTTTGGCTTGTGGATTTGGC+AGG - chr5_4:19012537-19012556 Msa0842070:intron 50.0%
CTTGCAAAGACTGACGTGCA+AGG - chr5_4:19012570-19012589 Msa0842070:intron 50.0%
AGTCCATCAGACCAGGATGT+CGG - chr5_4:19012979-19012998 Msa0842070:intron 50.0%
TGAGAGTAAGGCCAAGGGAA+AGG - chr5_4:19013277-19013296 Msa0842070:intron 50.0%
GAAAGAGCAGGAGCAGAACT+CGG - chr5_4:19014174-19014193 Msa0842070:CDS 50.0%
TCACGTGGCAACATGTGTCA+TGG - chr5_4:19014426-19014445 Msa0842070:CDS 50.0%
ACAAAGAGCGAGAGCAACAG+TGG - chr5_4:19014474-19014493 Msa0842070:CDS 50.0%
TGTTGAAGCCGTAAAGGTGG+CGG - chr5_4:19014514-19014533 Msa0842070:CDS 50.0%
! TCACGTAAAGTGGATGACGG+TGG + chr5_4:19014737-19014756 None:intergenic 50.0%
AGCTAGCACAAGCAGAGATC+AGG - chr5_4:19014862-19014881 Msa0842070:intron 50.0%
ACAAGCAGAGATCAGGCTCA+AGG - chr5_4:19014869-19014888 Msa0842070:intron 50.0%
GGAGGGGAAGCGACTAATGA+AGG - chr5_4:19008881-19008900 Msa0842070:three_prime_UTR 55.0%
CCACTATCGCCTCATTCGTG+CGG + chr5_4:19008961-19008980 None:intergenic 55.0%
TGATTGTCGGGCCACTGTGA+AGG - chr5_4:19009301-19009320 Msa0842070:intron 55.0%
GGGCCACTGTGAAGGATGAT+GGG - chr5_4:19009309-19009328 Msa0842070:intron 55.0%
GGCCACTGTGAAGGATGATG+GGG - chr5_4:19009310-19009329 Msa0842070:intron 55.0%
CACCCCATCATCCTTCACAG+TGG + chr5_4:19009315-19009334 None:intergenic 55.0%
AGCTGGGTGTACAACGGTTG+TGG - chr5_4:19010636-19010655 Msa0842070:intron 55.0%
TACCCCTGCCACAGCAAATG+TGG - chr5_4:19011218-19011237 Msa0842070:CDS 55.0%
!! AGCCACATTTGCTGTGGCAG+GGG + chr5_4:19011223-19011242 None:intergenic 55.0%
!! GAGCCACATTTGCTGTGGCA+GGG + chr5_4:19011224-19011243 None:intergenic 55.0%
!! TGAGCCACATTTGCTGTGGC+AGG + chr5_4:19011225-19011244 None:intergenic 55.0%
! GTGTGGACTGTACTGCAAGC+TGG - chr5_4:19012276-19012295 Msa0842070:intron 55.0%
CGTGCAAGGAGAGCGACTTA+AGG - chr5_4:19012584-19012603 Msa0842070:intron 55.0%
GCAAGGAGAGCGACTTAAGG+AGG - chr5_4:19012587-19012606 Msa0842070:intron 55.0%
TCACCGACATCCTGGTCTGA+TGG + chr5_4:19012985-19013004 None:intergenic 55.0%
TCAGAGTCTCACCGACATCC+TGG + chr5_4:19012993-19013012 None:intergenic 55.0%
!! AGAGTGAGGGGCGTTGAGTT+AGG - chr5_4:19013033-19013052 Msa0842070:intron 55.0%
CCGCACGAATGAGGCGATAG+TGG - chr5_4:19008958-19008977 Msa0842070:three_prime_UTR 60.0%
CGGGCCACTGTGAAGGATGA+TGG - chr5_4:19009308-19009327 Msa0842070:intron 60.0%
!! GGCAGGGGTACTGCTACATC+AGG + chr5_4:19011208-19011227 None:intergenic 60.0%
AGGTGTGGCCGCCACCTTTA+CGG + chr5_4:19014525-19014544 None:intergenic 60.0%
GTGGCGGCCACACCTGATAT+AGG - chr5_4:19014530-19014549 Msa0842070:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 19008159 19015401 19008159 ID=Msa0842070;Name=Msa0842070
chr5_4 mRNA 19008159 19015401 19008159 ID=Msa0842070-mRNA-1;Parent=Msa0842070;Name=Msa0842070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=147|1|1|1|0.94|0.84|19|1705|615
chr5_4 exon 19008159 19008177 19008159 ID=Msa0842070-mRNA-1:exon:7945;Parent=Msa0842070-mRNA-1
chr5_4 exon 19008374 19009108 19008374 ID=Msa0842070-mRNA-1:exon:7944;Parent=Msa0842070-mRNA-1
chr5_4 exon 19009344 19009409 19009344 ID=Msa0842070-mRNA-1:exon:7943;Parent=Msa0842070-mRNA-1
chr5_4 exon 19009513 19009587 19009513 ID=Msa0842070-mRNA-1:exon:7942;Parent=Msa0842070-mRNA-1
chr5_4 exon 19009780 19009845 19009780 ID=Msa0842070-mRNA-1:exon:7941;Parent=Msa0842070-mRNA-1
chr5_4 exon 19010106 19010357 19010106 ID=Msa0842070-mRNA-1:exon:7940;Parent=Msa0842070-mRNA-1
chr5_4 exon 19010453 19010616 19010453 ID=Msa0842070-mRNA-1:exon:7939;Parent=Msa0842070-mRNA-1
chr5_4 exon 19010737 19010774 19010737 ID=Msa0842070-mRNA-1:exon:7938;Parent=Msa0842070-mRNA-1
chr5_4 exon 19010869 19011363 19010869 ID=Msa0842070-mRNA-1:exon:7937;Parent=Msa0842070-mRNA-1
chr5_4 exon 19011501 19011774 19011501 ID=Msa0842070-mRNA-1:exon:7936;Parent=Msa0842070-mRNA-1
chr5_4 exon 19012800 19012976 19012800 ID=Msa0842070-mRNA-1:exon:7935;Parent=Msa0842070-mRNA-1
chr5_4 exon 19013100 19013186 19013100 ID=Msa0842070-mRNA-1:exon:7934;Parent=Msa0842070-mRNA-1
chr5_4 exon 19013309 19013408 19013309 ID=Msa0842070-mRNA-1:exon:7933;Parent=Msa0842070-mRNA-1
chr5_4 exon 19013502 19013611 19013502 ID=Msa0842070-mRNA-1:exon:7932;Parent=Msa0842070-mRNA-1
chr5_4 exon 19013693 19013876 19013693 ID=Msa0842070-mRNA-1:exon:7931;Parent=Msa0842070-mRNA-1
chr5_4 exon 19013978 19014048 19013978 ID=Msa0842070-mRNA-1:exon:7930;Parent=Msa0842070-mRNA-1
chr5_4 exon 19014147 19014318 19014147 ID=Msa0842070-mRNA-1:exon:7929;Parent=Msa0842070-mRNA-1
chr5_4 exon 19014407 19014705 19014407 ID=Msa0842070-mRNA-1:exon:7928;Parent=Msa0842070-mRNA-1
chr5_4 exon 19015086 19015401 19015086 ID=Msa0842070-mRNA-1:exon:7927;Parent=Msa0842070-mRNA-1
chr5_4 five_prime_UTR 19015255 19015401 19015255 ID=Msa0842070-mRNA-1:five_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19015086 19015254 19015086 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19014407 19014705 19014407 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19014147 19014318 19014147 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19013978 19014048 19013978 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19013693 19013876 19013693 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19013502 19013611 19013502 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19013309 19013408 19013309 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19013100 19013186 19013100 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19012800 19012976 19012800 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19011501 19011774 19011501 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 CDS 19011159 19011363 19011159 ID=Msa0842070-mRNA-1:cds;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19010869 19011158 19010869 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19010737 19010774 19010737 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19010453 19010616 19010453 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19010106 19010357 19010106 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19009780 19009845 19009780 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19009513 19009587 19009513 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19009344 19009409 19009344 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19008374 19009108 19008374 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
chr5_4 three_prime_UTR 19008159 19008177 19008159 ID=Msa0842070-mRNA-1:three_prime_utr;Parent=Msa0842070-mRNA-1
Gene Sequence

>Msa0842070

ATGGAACCGATTCAATCCAACGAATTTCACAATGACCCACAAACCCTAATCCCAAAGCATCAAGAAGATTCAGTAATGGAAGATGCAAATGATTCCTTGTTCGATTCTATGCTTGTTGATTCAAGTTCAAAACTCATTCAAAATGGCTTCACCAGATCTCAAAATTCAGAGGAGTGTGTAATGTTTGTAAATGCGGGAGGGGAAGCGACTAATGAAGGAGCTGATGGAGTGAAGTTTATGAGTGACACTTTTTTTGATGGTGGCAATGTTTTCCGCACGAATGAGGCGATAGTGGAAGGTGGAGATTACCCGTCGATTTATCAGTCAGCTCGGGTGGGAAGTTTTAGTTATAGAATTGAGAACCTTCCTCCTGGACAATATCTTGTTGACCTGCATTTTGTTGAGATTATTAATGTAAATGGGCCGAAAGGAATGAGGGTGTTCAATGTTTACATACAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCAGCTGTTGGAGTCAACAAGCCACTACAGCTGATTGATTGTCGGGCCACTGTGAAGGATGATGGGGTGATTCTCATAAGATTTGAGAGTTTAAATGGAAGCCCAGTTGTTAGTGGGATCTGCATTAGGAGAGCGACAAAAGAGTCAGTTCCACCAGTGCCAAGCGATTTCATTGAATGTAACTACTGTGCTGCGCAGATTGAAATTCCTTCATCACAGATAAAAGTTATGCAAACAAAATCTACAGCAAAGTATGAAAATAAGATAAAGGAGCTTACTATGCAGTGCGAGCTCAAAGCAAAAGAATGCTATGAGGCGTGGACGTCATTAACTGAAATGAGTAGGAAAATGGAAAAAGTCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACAGAACAAACTGCCGAGAAACAAGCTGAGAACCTGAGGAGTATTTCTAATAGATATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATCAGTTTACAGGAAAAAGTAAAGTTGATGAAGAGTGAGCAGTCTCGGCTTTCCTTTGAAGCACATGAATGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTATGCAGTACAGGAGTTGGTTAAGCAGTGTGAAGATCTTAAAGTGAAGTATTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATCAGAGTTTTTTGCCGTTGTCGTCCATTGAATAAGGTTGAAATGTCAGCTGGGTGTACAACGGTTGTGGATTTTGATGCAGCAAAAGATGGATGCCTTGGAATTTTGGCAACTGGCTCCTCTAAAAAATCATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTATGGACAAACAGGAACAGGAAAAACATTTACTATGGAAGGACCAGAGCAGAATAGAGGTGTAAATTACAGGACTCTTGAGCATTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGTGTGCTCGAGGTTTACAATGAACAAATCAGAGACCTATTGGCTACGGGACCAACATCAAAAAGGTTGGAGATAAAACAAAATTATGAAGGACATCATCATGTACCTGGTGTTGTAGAAGCCAAGGTTGACAACATAAGTGACGTGTGGACTGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAACAACGTTAATGAACATAGTAGTCGATCTCATTGGTACCAAGCTAATGCATTTTCCCCATTTCTTTACAATTTCTAG
Protein sequence

>Msa0842070

MEPIQSNEFHNDPQTLIPKHQEDSVMEDANDSLFDSMLVDSSSKLIQNGFTRSQNSEECVMFVNAGGEATNEGADGVKFMSDTFFDGGNVFRTNEAIVEGGDYPSIYQSARVGSFSYRIENLPPGQYLVDLHFVEIINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESLNGSPVVSGICIRRATKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKELTMQCELKAKECYEAWTSLTEMSRKMEKVQMELDQVTFKSLTTEQTAEKQAENLRSISNRYELDKKKWAEAIISLQEKVKLMKSEQSRLSFEAHECVDSIPELNKMVYAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGILATGSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGPEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHWYQANAFSPFLYNF*