AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263060 MtrunA17_Chr4g0075761 98.639 882 11 1 1 882 1 881 0.0 1812
Msa1263060 MtrunA17_Chr2g0289951 68.966 290 87 2 593 881 14 301 2.41e-135 405
Msa1263060 MtrunA17_Chr2g0289901 63.551 321 83 3 593 881 14 332 6.64e-133 400
Msa1263060 MtrunA17_Chr2g0289941 42.960 554 261 11 81 610 12 534 2.13e-130 402
Msa1263060 MtrunA17_Chr2g0289891 41.293 557 283 11 79 617 43 573 7.43e-117 368
Msa1263060 MtrunA17_Chr2g0289911 41.985 524 272 8 79 598 38 533 5.64e-114 359
Msa1263060 MtrunA17_Chr2g0289881 62.882 229 81 3 593 820 18 243 2.50e-87 278
Msa1263060 MtrunA17_Chr2g0289931 66.829 205 63 3 616 819 1 201 6.45e-85 270
Msa1263060 MtrunA17_Chr2g0289961 40.945 381 201 7 226 598 7 371 2.91e-77 256
Msa1263060 MtrunA17_Chr5g0427791 33.773 379 223 11 511 873 3281 3647 6.00e-53 201
Msa1263060 MtrunA17_Chr3g0132611 32.817 387 231 11 511 880 3287 3661 1.01e-51 197
Msa1263060 MtrunA17_Chr4g0052551 33.154 371 222 10 524 880 3379 3737 3.17e-50 193
Msa1263060 MtrunA17_Chr4g0052561 32.884 371 223 10 524 880 3400 3758 2.71e-49 190
Msa1263060 MtrunA17_Chr2g0293841 28.691 359 228 8 524 867 666 1011 1.91e-37 152
Msa1263060 MtrunA17_Chr2g0289871 73.171 82 22 0 800 881 1 82 2.05e-35 129
Msa1263060 MtrunA17_Chr2g0289921 69.512 82 25 0 800 881 1 82 3.17e-33 122
Msa1263060 MtrunA17_Chr7g0265431 25.000 384 260 7 511 876 771 1144 3.99e-32 135
Msa1263060 MtrunA17_Chr4g0037101 25.497 302 189 6 607 877 1581 1877 1.79e-16 84.7
Msa1263060 MtrunA17_Chr1g0181721 24.398 332 194 7 549 834 1179 1499 4.24e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263060 AT4G12570.1 49.564 803 380 9 81 882 95 873 0.0 765
Msa1263060 AT1G55860.1 33.609 363 216 9 524 873 3323 3673 3.88e-50 193
Msa1263060 AT1G70320.1 33.609 363 216 9 524 873 3300 3650 1.11e-49 192
Msa1263060 AT3G17205.1 28.090 356 234 6 524 867 671 1016 1.70e-36 149
Msa1263060 AT3G17205.3 28.090 356 234 6 524 867 671 1016 1.70e-36 149
Msa1263060 AT3G17205.2 28.090 356 234 6 524 867 657 1002 1.75e-36 149
Msa1263060 AT3G53090.1 24.932 365 246 7 521 867 775 1129 8.24e-31 131
Msa1263060 AT3G53090.2 24.932 365 246 7 521 867 775 1129 8.24e-31 131
Msa1263060 AT5G02880.1 25.956 366 223 11 551 877 1142 1498 2.65e-18 91.3
Msa1263060 AT5G02880.2 25.862 348 210 11 551 859 1142 1480 4.38e-17 87.0
Msa1263060 AT4G38600.2 24.752 303 186 8 607 877 1498 1790 7.34e-13 73.6
Msa1263060 AT1G53930.1 37.634 93 55 2 62 154 69 158 3.45e-11 62.8

Find 196 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCATTTCGCAAAATTT+AGG 0.140874 8_2:+66143534 None:intergenic
AGAAATCTTGTTCGATCTTT+TGG 0.167292 8_2:+66141386 None:intergenic
GCTTACTACTTATATTAATT+TGG 0.175687 8_2:-66142569 Msa1263060:CDS
CTTGTATGTTTCACCTTATA+CGG 0.191170 8_2:-66142455 Msa1263060:CDS
ACTGCGTGCTGGACTGTTTA+TGG 0.197538 8_2:-66141513 Msa1263060:CDS
TTGAAGGCAAGTATCAATTT+TGG 0.207942 8_2:+66141922 None:intergenic
ATCTTGGTCAAATGTTTATA+TGG 0.240608 8_2:-66137559 Msa1263060:three_prime_UTR
ATTGATTTCACTGTTTCTTC+TGG 0.253137 8_2:+66142847 None:intergenic
ATATTCAGATATCTTGGTTT+TGG 0.258128 8_2:-66139729 Msa1263060:CDS
TTGGATAAACATACCAGAAT+TGG 0.261658 8_2:+66141361 None:intergenic
TTTATGTCTTCTAAAGTAAT+AGG 0.263529 8_2:+66140162 None:intergenic
AAACAACTCTTCATTCTTCA+TGG 0.263574 8_2:-66142993 Msa1263060:CDS
TGATAGTTTGTTGAGGAATT+TGG 0.265690 8_2:-66142155 Msa1263060:CDS
CAAAGGGTTGGTGTTGGTTC+AGG 0.273096 8_2:-66142206 Msa1263060:CDS
GCAGAATCAGCATCAAGTTT+AGG 0.275846 8_2:+66142532 None:intergenic
TTCACCTTATACGGGGAATA+AGG 0.276380 8_2:-66142446 Msa1263060:CDS
TTCTCATTTCGCAAAATTTA+GGG 0.284524 8_2:+66143535 None:intergenic
ACAAGATTTCTCCCCAATTC+TGG 0.284588 8_2:-66141374 Msa1263060:intron
ATTAGAGAAGTGGAGGAATT+AGG 0.288826 8_2:-66140048 Msa1263060:CDS
GAACATATTGGCTCTAGTTT+TGG 0.291901 8_2:-66137765 Msa1263060:CDS
CCAGTTTCTTTCCAGATTGC+AGG 0.320682 8_2:+66137727 None:intergenic
TTGGCAAGTTGTTAATGATA+TGG 0.321662 8_2:-66142659 Msa1263060:CDS
AGTTGAAGGCTTTCGTGGTT+TGG 0.323282 8_2:-66137925 Msa1263060:CDS
AACTAGAGCCAATATGTTCT+TGG 0.327789 8_2:+66137769 None:intergenic
GTATGTTGATCTTCTTATAA+AGG 0.330723 8_2:-66139956 Msa1263060:CDS
GTTGAAGGCTTTCGTGGTTT+GGG 0.333475 8_2:-66137924 Msa1263060:CDS
TACTTATATTAATTTGGCTT+TGG 0.333864 8_2:-66142563 Msa1263060:CDS
TCAGCATCAAGTTTAGGTTT+AGG 0.350632 8_2:+66142538 None:intergenic
GTGAAATATTTACCAGTTGA+AGG 0.351097 8_2:-66137939 Msa1263060:CDS
TAGAAGCTGCAAGCAAATAT+TGG 0.351289 8_2:-66140118 Msa1263060:CDS
GCTGAGGGAGTGGTTTCTTT+TGG 0.351931 8_2:-66141456 Msa1263060:CDS
TGGATAAACATACCAGAATT+GGG 0.356070 8_2:+66141362 None:intergenic
ATGCCTCCTAGCTTCGAAAT+TGG 0.357538 8_2:+66141658 None:intergenic
TTCATTGATTCAGATGCATT+AGG 0.373706 8_2:-66140081 Msa1263060:CDS
CAAGCCTTATTCCCCGTATA+AGG 0.374779 8_2:+66142442 None:intergenic
ATTAATAATACAGGATTTGA+AGG 0.375239 8_2:-66137529 Msa1263060:three_prime_UTR
ACACAGATATTCAGATATCT+TGG 0.377507 8_2:-66139735 Msa1263060:CDS
AGTCCTCACAGGGACTAAAA+AGG 0.379202 8_2:+66142069 None:intergenic
TCTTGTTCTTGTCCTGCTGC+TGG 0.383862 8_2:+66142002 None:intergenic
TGCATTAGCTTTGATGCATA+AGG 0.385492 8_2:-66140238 Msa1263060:CDS
ATGCCATTTCCGTCGAAGAT+TGG 0.390215 8_2:-66139789 Msa1263060:CDS
TTAATAGATTTAACAGCGTC+AGG 0.391859 8_2:+66142598 None:intergenic
TGTAAATTGCTTAGTAGAGT+TGG 0.394201 8_2:-66142325 Msa1263060:CDS
CCTGCAATCTGGAAAGAAAC+TGG 0.394623 8_2:-66137727 Msa1263060:three_prime_UTR
AAGTTGTCAAAGTTCTGTTT+TGG 0.395384 8_2:-66137610 Msa1263060:three_prime_UTR
CAGTCCAGCACGCAGTGATT+CGG 0.396009 8_2:+66141520 None:intergenic
TTTAGCCATGATGATATTCC+CGG 0.399239 8_2:-66141636 Msa1263060:CDS
GTAAATTGCTTAGTAGAGTT+GGG 0.400275 8_2:-66142324 Msa1263060:CDS
TTTGCTTGCAGCTTCTATAT+AGG 0.404474 8_2:+66140124 None:intergenic
TTTCCAATCTTCGACGGAAA+TGG 0.407461 8_2:+66139786 None:intergenic
TTGTAGTTAATAGTAAGAAC+AGG 0.411643 8_2:-66139984 Msa1263060:CDS
TCGTAGTCTTCTTTCACCTC+CGG 0.415102 8_2:+66141617 None:intergenic
TAGAGTCTGAAGATCTTGAT+TGG 0.418715 8_2:-66139831 Msa1263060:CDS
TTCATTCGAATGATGTCAAA+AGG 0.419159 8_2:-66142895 Msa1263060:CDS
GACGCTAATCTTCACCTTGT+TGG 0.419467 8_2:-66142712 Msa1263060:CDS
ATTTACAAGTCCCATGAATC+TGG 0.421290 8_2:-66137888 Msa1263060:CDS
GACTGGAATCGAGCAGCAAC+AGG 0.428376 8_2:-66142050 Msa1263060:CDS
GGATAAAATATTAATAATAC+AGG 0.430551 8_2:-66137538 Msa1263060:three_prime_UTR
AGTCCAGCACGCAGTGATTC+GGG 0.431196 8_2:+66141521 None:intergenic
TGTAACATCCATAGCTGAGC+AGG 0.432078 8_2:-66139926 Msa1263060:CDS
ATTCGAATGAAGAAATGAAT+AGG 0.433080 8_2:+66142907 None:intergenic
GTCATTACCCAAGAACATAT+TGG 0.433530 8_2:-66137777 Msa1263060:CDS
GGTGGTTCTAGCGGCGGCGA+TGG 0.433997 8_2:-66142958 Msa1263060:CDS
TATTACTTTAGAAGACATAA+AGG 0.438867 8_2:-66140160 Msa1263060:CDS
GAAGACGATCACCAGATTCA+TGG 0.439105 8_2:+66137877 None:intergenic
AACCACTCCCTCAGCACACC+GGG 0.439249 8_2:+66141464 None:intergenic
GCAGGCTGCGCGTGTGGCGT+TGG 0.439975 8_2:-66142353 Msa1263060:CDS
CAAGGTAACAAGAACGGAAA+TGG 0.443734 8_2:+66142474 None:intergenic
TGGTGAACATACCTGCAATC+TGG 0.443889 8_2:-66137738 Msa1263060:exon
AACTTTGAAAGAAGAACTGC+TGG 0.445274 8_2:+66139854 None:intergenic
AAGATTTCTAAGCTTTATGA+TGG 0.447881 8_2:-66141800 Msa1263060:CDS
ATAGCTGATGGTTCGTCATC+GGG 0.452961 8_2:-66137477 Msa1263060:three_prime_UTR
AAGAATCTCAGCAAAACCTT+TGG 0.455740 8_2:+66139891 None:intergenic
ACTAGAGCCAATATGTTCTT+GGG 0.457550 8_2:+66137770 None:intergenic
CGTAGTCTTCTTTCACCTCC+GGG 0.458862 8_2:+66141618 None:intergenic
TGCTCGATTCCAGTCCTCAC+AGG 0.460556 8_2:+66142058 None:intergenic
AAAGCACACACTGAGTATAA+TGG 0.464625 8_2:-66139766 Msa1263060:CDS
TGCAGCTTTGTACAGACTAT+AGG 0.464817 8_2:-66137672 Msa1263060:three_prime_UTR
AAATGTGTTATGTATACATT+TGG 0.465155 8_2:-66137395 Msa1263060:three_prime_UTR
CCCATCTGTTGTCCTCTAGT+TGG 0.470193 8_2:-66137644 Msa1263060:three_prime_UTR
TCATGGACCGGTGGTGGTGG+TGG 0.472821 8_2:-66142976 Msa1263060:CDS
TTGCAGCTTCTATATAGGTC+AGG 0.476529 8_2:+66140129 None:intergenic
GAGGAATTTGGATTTGAGCT+TGG 0.478934 8_2:-66142143 Msa1263060:CDS
GAGATTCACTGACAAGGAAA+TGG 0.479101 8_2:-66141888 Msa1263060:CDS
TTAAGACGAGCTTGCATGAC+AGG 0.479167 8_2:+66137801 None:intergenic
CATTCTTCATGGACCGGTGG+TGG 0.480500 8_2:-66142982 Msa1263060:CDS
CTACTTGTTTAAAGCTTCCA+AGG 0.482863 8_2:-66140310 Msa1263060:intron
TTGTATGTTTCACCTTATAC+GGG 0.484986 8_2:-66142454 Msa1263060:CDS
AAACCACGAAAGCCTTCAAC+TGG 0.486764 8_2:+66137927 None:intergenic
TCTTCATGGACCGGTGGTGG+TGG 0.495795 8_2:-66142979 Msa1263060:CDS
TTACCAGTTGAAGGCTTTCG+TGG 0.496517 8_2:-66137930 Msa1263060:CDS
TAAAAGCATGTATGAGATGA+AGG 0.496856 8_2:+66137855 None:intergenic
CCACTGGCCCCGGTGTGCTG+AGG 0.499404 8_2:-66141472 Msa1263060:CDS
ATTGTTTATGATCTTTGTCA+TGG 0.500871 8_2:-66142631 Msa1263060:CDS
GATCCCGAATCACTGCGTGC+TGG 0.506030 8_2:-66141524 Msa1263060:CDS
GCCCCGGTGTGCTGAGGGAG+TGG 0.508642 8_2:-66141466 Msa1263060:CDS
AATGAAGAAGCCACTGGCCC+CGG 0.512967 8_2:-66141482 Msa1263060:CDS
CAGCAGGACAAGAACAAGAA+TGG 0.516630 8_2:-66141998 Msa1263060:CDS
TGACAAGGAAATGGTGTTTG+AGG 0.517234 8_2:-66141879 Msa1263060:CDS
AATGACAGCTGAAGAAAAGA+AGG 0.520042 8_2:-66137985 Msa1263060:CDS
AAGTGGAGGAATTAGGACAG+AGG 0.520577 8_2:-66140041 Msa1263060:CDS
ATAACTGTGTTTATGAGAGC+TGG 0.520845 8_2:+66143308 None:intergenic
ATGTCACCAATTTCGAAGCT+AGG 0.522617 8_2:-66141664 Msa1263060:CDS
TCTAGCGGCGGCGATGGTGG+TGG 0.527208 8_2:-66142952 Msa1263060:CDS
GGTTCTAGCGGCGGCGATGG+TGG 0.527338 8_2:-66142955 Msa1263060:CDS
ATGCAGATTATGTTGTACCT+TGG 0.529364 8_2:+66140293 None:intergenic
AAAGCGATCCAGCTGTGTCC+TGG 0.529729 8_2:-66140018 Msa1263060:CDS
AATAGCTGATGGTTCGTCAT+CGG 0.529972 8_2:-66137478 Msa1263060:three_prime_UTR
ACTCTTCATTCTTCATGGAC+CGG 0.530727 8_2:-66142988 Msa1263060:CDS
TGTTATGTATACATTTGGTC+TGG 0.532851 8_2:-66137390 None:intergenic
CAGGTTTCACACTTTGCCAA+AGG 0.533753 8_2:-66139907 Msa1263060:CDS
CAATGGTAAACAGCTTCAGT+GGG 0.535417 8_2:-66142767 Msa1263060:CDS
TCAGCAAGTTCACGAACAAA+CGG 0.535503 8_2:+66142175 None:intergenic
CTGCAAGCAAATATTGGAGA+TGG 0.535685 8_2:-66140112 Msa1263060:CDS
GTGTGAAACCTGCTCAGCTA+TGG 0.536035 8_2:+66139918 None:intergenic
TGCATGAGATGCTCATTGAC+AGG 0.536076 8_2:-66141589 Msa1263060:CDS
TCCTTTGTTGAACAATGTTG+AGG 0.537083 8_2:-66142101 Msa1263060:CDS
CTTGAGTACTTCAGCTTCTG+TGG 0.540272 8_2:-66140270 Msa1263060:CDS
TCAATGGTAAACAGCTTCAG+TGG 0.541769 8_2:-66142768 Msa1263060:CDS
ACATTCTAGTTAATAGCTGA+TGG 0.545655 8_2:-66137489 Msa1263060:three_prime_UTR
CCTCAGCACACCGGGGCCAG+TGG 0.547426 8_2:+66141472 None:intergenic
ACAGGCATAGATGAATAAGC+TGG 0.547667 8_2:+66137819 None:intergenic
GTCCAAGACGTTTCATACGC+AGG 0.552066 8_2:-66142371 Msa1263060:CDS
CGTATAAGGTGAAACATACA+AGG 0.552501 8_2:+66142456 None:intergenic
TGTTCTTGTCCTGCTGCTGG+TGG 0.552538 8_2:+66142005 None:intergenic
GAACGAATTGAAGAAATGAA+AGG 0.552557 8_2:-66142820 Msa1263060:CDS
ATCTTGATTGGATGCTGCGT+GGG 0.555503 8_2:-66139819 Msa1263060:CDS
CACCTCCGGGAATATCATCA+TGG 0.556440 8_2:+66141631 None:intergenic
TTAACAACTTGCCAAGCTTG+AGG 0.558690 8_2:+66142667 None:intergenic
TCATACGCAGGCTGCGCGTG+TGG 0.560611 8_2:-66142359 Msa1263060:CDS
TGTTCAACAAAGGATTAGCA+AGG 0.561790 8_2:+66142110 None:intergenic
AATTTCACTTGCGGCATCTG+AGG 0.561824 8_2:-66142239 Msa1263060:CDS
AGCTGCTGAAATTTCACTTG+CGG 0.565049 8_2:-66142248 Msa1263060:CDS
GTACAGAACATCCTCAAGCT+TGG 0.565129 8_2:-66142678 Msa1263060:CDS
TCCTCAACATTGTTCAACAA+AGG 0.565254 8_2:+66142100 None:intergenic
GGGACTTGTAAATGTGGAGA+CGG 0.565502 8_2:+66137898 None:intergenic
TGTTGCTTACCACCAGCAGC+AGG 0.565851 8_2:-66142014 Msa1263060:CDS
GCTAGAACCACCACCACCAC+CGG 0.566879 8_2:+66142969 None:intergenic
AACAAAGGATTAGCAAGGGA+AGG 0.567911 8_2:+66142115 None:intergenic
ACAAAGGATTAGCAAGGGAA+GGG 0.568402 8_2:+66142116 None:intergenic
GAATCACAAAGGGTTGGTGT+TGG 0.569578 8_2:-66142212 Msa1263060:CDS
TGATCAATTAACGGTGGTAG+TGG 0.575081 8_2:-66143237 Msa1263060:five_prime_UTR
GACGTTTATTAGAGAAGTGG+AGG 0.576387 8_2:-66140055 Msa1263060:CDS
TCCAACTAGAGGACAACAGA+TGG 0.577139 8_2:+66137643 None:intergenic
AAACCACTCCCTCAGCACAC+CGG 0.578474 8_2:+66141463 None:intergenic
GGATAAACATACCAGAATTG+GGG 0.580164 8_2:+66141363 None:intergenic
CTGAGGATGAGAATCACAAA+GGG 0.580618 8_2:-66142222 Msa1263060:CDS
AAGACGATCACCAGATTCAT+GGG 0.582622 8_2:+66137878 None:intergenic
TTGATGCATAAGGTGCAAGT+TGG 0.584006 8_2:-66140228 Msa1263060:CDS
ATCTGAAAGAGAAATAGAAG+AGG 0.585860 8_2:-66143513 Msa1263060:five_prime_UTR
TCAATTAACGGTGGTAGTGG+TGG 0.586127 8_2:-66143234 Msa1263060:five_prime_UTR
ACTGACGTTTATTAGAGAAG+TGG 0.586551 8_2:-66140058 Msa1263060:CDS
CATCGTTAAATATGCAAAGA+GGG 0.587269 8_2:-66141720 Msa1263060:CDS
GTGTGCTTTCCAATCTTCGA+CGG 0.588467 8_2:+66139780 None:intergenic
CAAAGGATTAGCAAGGGAAG+GGG 0.590290 8_2:+66142117 None:intergenic
CTTCATTCTTCATGGACCGG+TGG 0.590546 8_2:-66142985 Msa1263060:CDS
ATGGTTCGTCATCGGGAGTG+TGG 0.595413 8_2:-66137470 Msa1263060:three_prime_UTR
GCTCGATTCCAGTCCTCACA+GGG 0.595969 8_2:+66142059 None:intergenic
TCTTGTACTCAAGAATCCAC+TGG 0.597314 8_2:+66141687 None:intergenic
CAGGCATAGATGAATAAGCT+GGG 0.601849 8_2:+66137820 None:intergenic
CCAACTAGAGGACAACAGAT+GGG 0.604467 8_2:+66137644 None:intergenic
GAACAAACACTCGCGGAGTG+TGG 0.604696 8_2:-66142745 Msa1263060:CDS
GGATGAGAATCACAAAGGGT+TGG 0.611943 8_2:-66142218 Msa1263060:CDS
TCATCGTTAAATATGCAAAG+AGG 0.615436 8_2:-66141721 Msa1263060:CDS
GGACTTGTAAATGTGGAGAC+GGG 0.615613 8_2:+66137899 None:intergenic
GTTCAACAAAGGATTAGCAA+GGG 0.616019 8_2:+66142111 None:intergenic
AACATACAAGGTAACAAGAA+CGG 0.618396 8_2:+66142468 None:intergenic
GTGGTAGTGGTGGAAGTAGA+CGG 0.618424 8_2:-66143224 Msa1263060:five_prime_UTR
TTCTCAAAGTATCCAACTAG+AGG 0.620356 8_2:+66137632 None:intergenic
AAAAGGTTAGGGCTTTCGAT+CGG 0.620493 8_2:+66143138 None:intergenic
ATTCATGGGACTTGTAAATG+TGG 0.624672 8_2:+66137892 None:intergenic
ATGAAACGTCTTGGACAATG+AGG 0.626594 8_2:+66142378 None:intergenic
GCGATCCAGCTGTGTCCTGG+TGG 0.633678 8_2:-66140015 Msa1263060:CDS
GAAGTAGACGGCACCGACGA+CGG 0.634475 8_2:-66143212 Msa1263060:five_prime_UTR
AACTTGCTGATAGTTTGTTG+AGG 0.634625 8_2:-66142162 Msa1263060:CDS
GAAAGAGAAATAGAAGAGGA+CGG 0.636273 8_2:-66143509 Msa1263060:five_prime_UTR
AAGAATCCACTGGTGTTCGT+CGG 0.639588 8_2:+66141697 None:intergenic
AGAGGGCCGACGAACACCAG+TGG 0.642356 8_2:-66141703 Msa1263060:CDS
TCACCAATTTCGAAGCTAGG+AGG 0.648868 8_2:-66141661 Msa1263060:CDS
GGTGGTGGTGGTTCTAGCGG+CGG 0.649766 8_2:-66142964 Msa1263060:CDS
GGTAACAAGAACGGAAATGG+CGG 0.652521 8_2:+66142477 None:intergenic
TCTGAGGATGAGAATCACAA+AGG 0.662376 8_2:-66142223 Msa1263060:CDS
GGACAAGAGATTCACTGACA+AGG 0.665008 8_2:-66141894 Msa1263060:CDS
GATCTTGATTGGATGCTGCG+TGG 0.672731 8_2:-66139820 Msa1263060:CDS
TGTATGTTTCACCTTATACG+GGG 0.672887 8_2:-66142453 Msa1263060:CDS
GAAAGATAGAGAGAGCACGC+AGG 0.676105 8_2:+66141842 None:intergenic
TTGTGATGATCAATTAACGG+TGG 0.688137 8_2:-66143243 Msa1263060:five_prime_UTR
GGTGGTAAGCAACACAACCA+CGG 0.692350 8_2:+66142023 None:intergenic
ACTGATTGTACAACAGACGA+AGG 0.701150 8_2:+66141951 None:intergenic
ACCACTCCCTCAGCACACCG+GGG 0.705242 8_2:+66141465 None:intergenic
TACTACGCATTCGACCAACA+AGG 0.708760 8_2:+66142698 None:intergenic
AGCCATGATGATATTCCCGG+AGG 0.709855 8_2:-66141633 Msa1263060:CDS
TGTAGTTAATAGTAAGAACA+GGG 0.714402 8_2:-66139983 Msa1263060:CDS
GAGCAGCAACAGGCTCTCCG+TGG 0.719942 8_2:-66142040 Msa1263060:CDS
TCAGTGGGAACAAACACTCG+CGG 0.732147 8_2:-66142752 Msa1263060:CDS
GGAGGTGAAAGAAGACTACG+AGG 0.770938 8_2:-66141615 Msa1263060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTACAATGATTTTTATT+AGG - chr8_2:66139721-66139740 Msa1263060:intron 10.0%
!! TTAATTTATTTGTAAGAAAG+GGG + chr8_2:66141571-66141590 None:intergenic 15.0%
!! GTTAATTTATTTGTAAGAAA+GGG + chr8_2:66141572-66141591 None:intergenic 15.0%
!! AACAGAGATAATTAAAAAAA+AGG + chr8_2:66142036-66142055 None:intergenic 15.0%
!! GGATAAAATATTAATAATAC+AGG - chr8_2:66143409-66143428 Msa1263060:five_prime_UTR 15.0%
!!! TTTTTGTGATGATCAATTAA+CGG - chr8_2:66137701-66137720 Msa1263060:three_prime_UTR 20.0%
!! GCTTACTACTTATATTAATT+TGG - chr8_2:66138378-66138397 Msa1263060:intron 20.0%
!!! TACTTATATTAATTTGGCTT+TGG - chr8_2:66138384-66138403 Msa1263060:intron 20.0%
!!! TGTATTAAGCATTTTTTGAA+TGG - chr8_2:66138538-66138557 Msa1263060:intron 20.0%
!!! ACGTAATGTGAATTTTAAAT+AGG + chr8_2:66140322-66140341 None:intergenic 20.0%
!!! TTTATGTCTTCTAAAGTAAT+AGG + chr8_2:66140788-66140807 None:intergenic 20.0%
!!! TATTACTTTAGAAGACATAA+AGG - chr8_2:66140787-66140806 Msa1263060:intron 20.0%
!!! TATTTTACCACAACTATATA+GGG - chr8_2:66141403-66141422 Msa1263060:CDS 20.0%
!! TAATTTATTTGTAAGAAAGG+GGG + chr8_2:66141570-66141589 None:intergenic 20.0%
!! GGTTAATTTATTTGTAAGAA+AGG + chr8_2:66141573-66141592 None:intergenic 20.0%
!! GATAATTAAAAAAAAGGAGT+GGG + chr8_2:66142030-66142049 None:intergenic 20.0%
!! AGATAATTAAAAAAAAGGAG+TGG + chr8_2:66142031-66142050 None:intergenic 20.0%
!! AATTATATTCAGTCATTGAA+GGG + chr8_2:66142073-66142092 None:intergenic 20.0%
!! TAATTATATTCAGTCATTGA+AGG + chr8_2:66142074-66142093 None:intergenic 20.0%
!! TCAATGACTGAATATAATTA+TGG - chr8_2:66142074-66142093 Msa1263060:CDS 20.0%
!!! AATTTCAGTCGATATTTTAT+GGG + chr8_2:66142210-66142229 None:intergenic 20.0%
!! GATAAATTAAATATAGCTTG+AGG + chr8_2:66142781-66142800 None:intergenic 20.0%
!!! AAGCTATATTTAATTTATCC+AGG - chr8_2:66142782-66142801 Msa1263060:CDS 20.0%
!! ATTAATAATACAGGATTTGA+AGG - chr8_2:66143418-66143437 Msa1263060:five_prime_UTR 20.0%
!! AAATGTGTTATGTATACATT+TGG - chr8_2:66143552-66143571 Msa1263060:five_prime_UTR 20.0%
! TTCTCATTTCGCAAAATTTA+GGG + chr8_2:66137415-66137434 None:intergenic 25.0%
! ATTCTCATTTCGCAAAATTT+AGG + chr8_2:66137416-66137435 None:intergenic 25.0%
! ATTCGAATGAAGAAATGAAT+AGG + chr8_2:66138043-66138062 None:intergenic 25.0%
! ATTGTTTATGATCTTTGTCA+TGG - chr8_2:66138316-66138335 Msa1263060:intron 25.0%
!! TCTCTATCTTTCAATTTTGA+AGG - chr8_2:66139116-66139135 Msa1263060:intron 25.0%
!! AAGATTTCTAAGCTTTATGA+TGG - chr8_2:66139147-66139166 Msa1263060:intron 25.0%
!! AATCTTTTGAATACATTGCA+CGG - chr8_2:66139397-66139416 Msa1263060:intron 25.0%
! ATATGTTGAACAAGTATTTG+AGG - chr8_2:66139752-66139771 Msa1263060:CDS 25.0%
! CTAAACATTTCTTTATGCAA+AGG + chr8_2:66139785-66139804 None:intergenic 25.0%
!!! AGTATAGAGGTTTTATATCA+TGG + chr8_2:66140095-66140114 None:intergenic 25.0%
! TGAATGTTGAGTAATAGATA+AGG + chr8_2:66140258-66140277 None:intergenic 25.0%
! TTATCACATGGAAATACAAT+AGG - chr8_2:66140287-66140306 Msa1263060:CDS 25.0%
!!! AACTTTGAAATCATGTTTAG+TGG + chr8_2:66140372-66140391 None:intergenic 25.0%
!!! TTCAAAGTTGTTGTTTTTAG+TGG - chr8_2:66140383-66140402 Msa1263060:intron 25.0%
! AATCAAGAAAATTTCAACAC+AGG + chr8_2:66140432-66140451 None:intergenic 25.0%
! TTTCTTGATTTCTTCTACAT+TGG - chr8_2:66140442-66140461 Msa1263060:intron 25.0%
! TTGTAGTTAATAGTAAGAAC+AGG - chr8_2:66140963-66140982 Msa1263060:intron 25.0%
! TGTAGTTAATAGTAAGAACA+GGG - chr8_2:66140964-66140983 Msa1263060:intron 25.0%
! GTATGTTGATCTTCTTATAA+AGG - chr8_2:66140991-66141010 Msa1263060:intron 25.0%
!! ATATTCAGATATCTTGGTTT+TGG - chr8_2:66141218-66141237 Msa1263060:intron 25.0%
!!! TATTCAGATATCTTGGTTTT+GGG - chr8_2:66141219-66141238 Msa1263060:intron 25.0%
!! GTATTTTACCACAACTATAT+AGG - chr8_2:66141402-66141421 Msa1263060:CDS 25.0%
! AACAAGAGTTGTTAATAAGA+GGG + chr8_2:66141523-66141542 None:intergenic 25.0%
! TTTCAGTTGCAAGTAAAATT+GGG + chr8_2:66141761-66141780 None:intergenic 25.0%
! ATTATATTCAGTCATTGAAG+GGG + chr8_2:66142072-66142091 None:intergenic 25.0%
! ATGACTGAATATAATTATGG+TGG - chr8_2:66142077-66142096 Msa1263060:CDS 25.0%
! TGACTGAATATAATTATGGT+GGG - chr8_2:66142078-66142097 Msa1263060:CDS 25.0%
!! GAATTTCAGTCGATATTTTA+TGG + chr8_2:66142211-66142230 None:intergenic 25.0%
! GAAAAAAAGTAAGAAGAATG+AGG + chr8_2:66142380-66142399 None:intergenic 25.0%
!! GGATGTAATTTTATTGATCT+TGG - chr8_2:66143372-66143391 Msa1263060:five_prime_UTR 25.0%
! ATCTTGGTCAAATGTTTATA+TGG - chr8_2:66143388-66143407 Msa1263060:five_prime_UTR 25.0%
ATCTGAAAGAGAAATAGAAG+AGG - chr8_2:66137434-66137453 Msa1263060:three_prime_UTR 30.0%
!!! TTTTTGTTTGGGTTGGTTTT+TGG + chr8_2:66137467-66137486 None:intergenic 30.0%
!!! ATCGGAGTCATTTTTTTAGA+CGG + chr8_2:66137794-66137813 None:intergenic 30.0%
! GTTGTTGTTGAAAAAGGTTA+GGG + chr8_2:66137823-66137842 None:intergenic 30.0%
! TGTTGTTGTTGAAAAAGGTT+AGG + chr8_2:66137824-66137843 None:intergenic 30.0%
! GTTGTTGTTGTTGTTGAAAA+AGG + chr8_2:66137829-66137848 None:intergenic 30.0%
!!! AGAATGAAGAGTTGTTTTTG+TGG + chr8_2:66137951-66137970 None:intergenic 30.0%
AAACAACTCTTCATTCTTCA+TGG - chr8_2:66137954-66137973 Msa1263060:CDS 30.0%
TTCATTCGAATGATGTCAAA+AGG - chr8_2:66138052-66138071 Msa1263060:intron 30.0%
! ATTGATTTCACTGTTTCTTC+TGG + chr8_2:66138103-66138122 None:intergenic 30.0%
GAACGAATTGAAGAAATGAA+AGG - chr8_2:66138127-66138146 Msa1263060:intron 30.0%
TTGGCAAGTTGTTAATGATA+TGG - chr8_2:66138288-66138307 Msa1263060:intron 30.0%
TTAATAGATTTAACAGCGTC+AGG + chr8_2:66138352-66138371 None:intergenic 30.0%
AACATACAAGGTAACAAGAA+CGG + chr8_2:66138482-66138501 None:intergenic 30.0%
CTTGTATGTTTCACCTTATA+CGG - chr8_2:66138492-66138511 Msa1263060:intron 30.0%
TTGTATGTTTCACCTTATAC+GGG - chr8_2:66138493-66138512 Msa1263060:intron 30.0%
TGTAAATTGCTTAGTAGAGT+TGG - chr8_2:66138622-66138641 Msa1263060:intron 30.0%
GTAAATTGCTTAGTAGAGTT+GGG - chr8_2:66138623-66138642 Msa1263060:intron 30.0%
GTACGACAAAAAAGATACAA+AGG + chr8_2:66138658-66138677 None:intergenic 30.0%
!!! TCTTTTTTGTCGTACTAGTT+TGG - chr8_2:66138663-66138682 Msa1263060:intron 30.0%
!!! CTTTTTTGTCGTACTAGTTT+GGG - chr8_2:66138664-66138683 Msa1263060:intron 30.0%
!!! TTTTTTGTCGTACTAGTTTG+GGG - chr8_2:66138665-66138684 Msa1263060:intron 30.0%
!!! TACTAGTTTGGGGTTTTTTT+TGG - chr8_2:66138675-66138694 Msa1263060:intron 30.0%
!! TGATAGTTTGTTGAGGAATT+TGG - chr8_2:66138792-66138811 Msa1263060:intron 30.0%
! TTGAAGGCAAGTATCAATTT+TGG + chr8_2:66139028-66139047 None:intergenic 30.0%
TGATACTTGCCTTCAAAAAA+TGG - chr8_2:66139032-66139051 Msa1263060:intron 30.0%
!!! ATCTCTTGTCCATTTTTTGA+AGG + chr8_2:66139044-66139063 None:intergenic 30.0%
TCATCGTTAAATATGCAAAG+AGG - chr8_2:66139226-66139245 Msa1263060:intron 30.0%
CATCGTTAAATATGCAAAGA+GGG - chr8_2:66139227-66139246 Msa1263060:intron 30.0%
! ATCTTTTGAATACATTGCAC+GGG - chr8_2:66139398-66139417 Msa1263060:intron 30.0%
! GAAATCTTGTTCGATCTTTT+GGG + chr8_2:66139563-66139582 None:intergenic 30.0%
! AGAAATCTTGTTCGATCTTT+TGG + chr8_2:66139564-66139583 None:intergenic 30.0%
TGGATAAACATACCAGAATT+GGG + chr8_2:66139588-66139607 None:intergenic 30.0%
TTGGATAAACATACCAGAAT+TGG + chr8_2:66139589-66139608 None:intergenic 30.0%
! GAGAAGTAAGTTCAGAATTT+TGG + chr8_2:66139608-66139627 None:intergenic 30.0%
TTGAAAATACTCCTAACACA+TGG + chr8_2:66139647-66139666 None:intergenic 30.0%
!! TAGCTTGCATTTTTCTGATT+TGG - chr8_2:66139694-66139713 Msa1263060:intron 30.0%
! TCTCTCACTATTGTTTCTTA+GGG + chr8_2:66139818-66139837 None:intergenic 30.0%
! TTCTCTCACTATTGTTTCTT+AGG + chr8_2:66139819-66139838 None:intergenic 30.0%
TTTGTAAGGTTAATGAAGTG+AGG + chr8_2:66139873-66139892 None:intergenic 30.0%
TGCAATAGTTTAGTGAAAAC+CGG - chr8_2:66139932-66139951 Msa1263060:CDS 30.0%
AAACTTTCGTACAAGTATAG+AGG + chr8_2:66140108-66140127 None:intergenic 30.0%
!! ATCTGATTCAACCATTTTTG+AGG - chr8_2:66140165-66140184 Msa1263060:CDS 30.0%
GGAAATGTGGAAAGAAATAT+TGG + chr8_2:66140202-66140221 None:intergenic 30.0%
!!! AGTTGTTGTTTTTAGTGGAT+AGG - chr8_2:66140388-66140407 Msa1263060:intron 30.0%
TTAACAATTACGACTGAAAC+AGG + chr8_2:66140475-66140494 None:intergenic 30.0%
GAAAAAAGACAAGTTACACT+GGG + chr8_2:66140513-66140532 None:intergenic 30.0%
AGAAAAAAGACAAGTTACAC+TGG + chr8_2:66140514-66140533 None:intergenic 30.0%
GACAAAGGATAAGTTAAACT+GGG + chr8_2:66140618-66140637 None:intergenic 30.0%
AGACAAAGGATAAGTTAAAC+TGG + chr8_2:66140619-66140638 None:intergenic 30.0%
!! AGCTTTAAACAAGTAGACAA+AGG + chr8_2:66140633-66140652 None:intergenic 30.0%
!! TTCATTGATTCAGATGCATT+AGG - chr8_2:66140866-66140885 Msa1263060:intron 30.0%
ACACAGATATTCAGATATCT+TGG - chr8_2:66141212-66141231 Msa1263060:intron 30.0%
TGACTAGTGACAAGTATATA+GGG - chr8_2:66141325-66141344 Msa1263060:intron 30.0%
! AGATTTTCCCTATATAGTTG+TGG + chr8_2:66141413-66141432 None:intergenic 30.0%
GAACAAGAGTTGTTAATAAG+AGG + chr8_2:66141524-66141543 None:intergenic 30.0%
TATTAACAACTCTTGTTCAC+AGG - chr8_2:66141526-66141545 Msa1263060:CDS 30.0%
!!! GTTAGAGTCAGTTAGTTTTT+AGG + chr8_2:66141600-66141619 None:intergenic 30.0%
TGAAGGGATTTAACAAATCA+GGG - chr8_2:66141687-66141706 Msa1263060:CDS 30.0%
TAAACAAATGCCAAGTCATT+TGG + chr8_2:66141729-66141748 None:intergenic 30.0%
CTTTCAGTTGCAAGTAAAAT+TGG + chr8_2:66141762-66141781 None:intergenic 30.0%
!!! CTCCAAGAATCATTTTTTCT+GGG - chr8_2:66141788-66141807 Msa1263060:CDS 30.0%
AACCCAGAAAAAATGATTCT+TGG + chr8_2:66141793-66141812 None:intergenic 30.0%
TTCTTCTCTAATCTATGGTT+GGG + chr8_2:66141889-66141908 None:intergenic 30.0%
TTTCTTCTCTAATCTATGGT+TGG + chr8_2:66141890-66141909 None:intergenic 30.0%
! TTTTCATTGGACAATGTGTA+AGG + chr8_2:66141924-66141943 None:intergenic 30.0%
! TGGTGATACATCATTTTCAT+TGG + chr8_2:66141937-66141956 None:intergenic 30.0%
!! ATATACACCACTTTTCACTA+CGG - chr8_2:66142004-66142023 Msa1263060:CDS 30.0%
GTCATTGGAAGAAAAAAAAC+GGG + chr8_2:66142247-66142266 None:intergenic 30.0%
GGTCATTGGAAGAAAAAAAA+CGG + chr8_2:66142248-66142267 None:intergenic 30.0%
!!! ACAATGGTTTTTGCCATTTT+TGG - chr8_2:66142276-66142295 Msa1263060:CDS 30.0%
AATCAACACCAAACCAAAAA+TGG + chr8_2:66142292-66142311 None:intergenic 30.0%
! TTTAGAAGGAAGTACACAAA+TGG + chr8_2:66142486-66142505 None:intergenic 30.0%
ATTTGTGTACTTCCTTCTAA+AGG - chr8_2:66142485-66142504 Msa1263060:CDS 30.0%
!! TCAATATCTTAGTCTTGTAG+AGG + chr8_2:66142556-66142575 None:intergenic 30.0%
ATGGTATCAGAAATGAAGAA+GGG + chr8_2:66142615-66142634 None:intergenic 30.0%
CTTTCAGTTTAAACACATGA+TGG + chr8_2:66142634-66142653 None:intergenic 30.0%
ATTGCAGAACAAAATATCTG+AGG + chr8_2:66142835-66142854 None:intergenic 30.0%
ACAGTCTGTTTGAAAAAACT+TGG - chr8_2:66142925-66142944 Msa1263060:CDS 30.0%
! AGAAGGTTCTTCTTTTCTTT+TGG - chr8_2:66142979-66142998 Msa1263060:CDS 30.0%
GTGAAATATTTACCAGTTGA+AGG - chr8_2:66143008-66143027 Msa1263060:CDS 30.0%
! TAAAAGCATGTATGAGATGA+AGG + chr8_2:66143095-66143114 None:intergenic 30.0%
! CATCTCATACATGCTTTTAT+CGG - chr8_2:66143096-66143115 Msa1263060:CDS 30.0%
! AAGTTGTCAAAGTTCTGTTT+TGG - chr8_2:66143337-66143356 Msa1263060:five_prime_UTR 30.0%
! ACATTCTAGTTAATAGCTGA+TGG - chr8_2:66143458-66143477 Msa1263060:five_prime_UTR 30.0%
GAAAGAGAAATAGAAGAGGA+CGG - chr8_2:66137438-66137457 Msa1263060:three_prime_UTR 35.0%
! TTTTTGTGTGTGCTTTGTGA+TGG + chr8_2:66137519-66137538 None:intergenic 35.0%
ATAACTGTGTTTATGAGAGC+TGG + chr8_2:66137642-66137661 None:intergenic 35.0%
TTGTGATGATCAATTAACGG+TGG - chr8_2:66137704-66137723 Msa1263060:three_prime_UTR 35.0%
! GTCTTCGTCTAATTTTCGTT+TGG + chr8_2:66137870-66137889 None:intergenic 35.0%
! GAATTCCTCTTTTTGAACAG+AGG - chr8_2:66138149-66138168 Msa1263060:intron 35.0%
ATCAACCTCTGTTCAAAAAG+AGG + chr8_2:66138157-66138176 None:intergenic 35.0%
!! GAACAGAGGTTGATTTTCAA+TGG - chr8_2:66138163-66138182 Msa1263060:intron 35.0%
! TCAGCATCAAGTTTAGGTTT+AGG + chr8_2:66138412-66138431 None:intergenic 35.0%
CGTATAAGGTGAAACATACA+AGG + chr8_2:66138494-66138513 None:intergenic 35.0%
TGTATGTTTCACCTTATACG+GGG - chr8_2:66138494-66138513 Msa1263060:intron 35.0%
!! AACTTGCTGATAGTTTGTTG+AGG - chr8_2:66138785-66138804 Msa1263060:intron 35.0%
! GTTCAACAAAGGATTAGCAA+GGG + chr8_2:66138839-66138858 None:intergenic 35.0%
! TGTTCAACAAAGGATTAGCA+AGG + chr8_2:66138840-66138859 None:intergenic 35.0%
TCCTTTGTTGAACAATGTTG+AGG - chr8_2:66138846-66138865 Msa1263060:intron 35.0%
TCCTCAACATTGTTCAACAA+AGG + chr8_2:66138850-66138869 None:intergenic 35.0%
TTTAGCCATGATGATATTCC+CGG - chr8_2:66139311-66139330 Msa1263060:intron 35.0%
TTCAAAAATGAAGAAGCCAC+TGG - chr8_2:66139459-66139478 Msa1263060:intron 35.0%
GGATAAACATACCAGAATTG+GGG + chr8_2:66139587-66139606 None:intergenic 35.0%
! CTCTCACTATTGTTTCTTAG+GGG + chr8_2:66139817-66139836 None:intergenic 35.0%
GCAATAGTTTAGTGAAAACC+GGG - chr8_2:66139933-66139952 Msa1263060:CDS 35.0%
TGATAGACAAACAAACAACC+CGG + chr8_2:66139954-66139973 None:intergenic 35.0%
CTCCAATTTGATGAAATCCT+TGG - chr8_2:66140006-66140025 Msa1263060:CDS 35.0%
CTCCAAGGATTTCATCAAAT+TGG + chr8_2:66140011-66140030 None:intergenic 35.0%
CAATTTGATGAAATCCTTGG+AGG - chr8_2:66140009-66140028 Msa1263060:CDS 35.0%
TGAAAGGCAAACATCTCATA+TGG - chr8_2:66140042-66140061 Msa1263060:CDS 35.0%
!! TATCATGGAAGCATTTGTGA+TGG + chr8_2:66140080-66140099 None:intergenic 35.0%
!!! ACCATTTTTGAGGCTGTTTT+AGG - chr8_2:66140175-66140194 Msa1263060:CDS 35.0%
!!! CCATTTTTGAGGCTGTTTTA+GGG - chr8_2:66140176-66140195 Msa1263060:CDS 35.0%
ATTCTTCAAGAAGCAACAGA+AGG + chr8_2:66140223-66140242 None:intergenic 35.0%
CTTCTTGAAGAATGATGCAT+TGG - chr8_2:66140230-66140249 Msa1263060:CDS 35.0%
TCACGTAGTCATTTATCACA+TGG - chr8_2:66140275-66140294 Msa1263060:CDS 35.0%
! CTACTTGTTTAAAGCTTCCA+AGG - chr8_2:66140532-66140551 Msa1263060:intron 35.0%
! CTACTTGTTTAAAGCTTCCA+AGG - chr8_2:66140532-66140551 Msa1263060:intron 35.0%
ATGCAGATTATGTTGTACCT+TGG + chr8_2:66140657-66140676 None:intergenic 35.0%
!! TGCATTAGCTTTGATGCATA+AGG - chr8_2:66140709-66140728 Msa1263060:intron 35.0%
TTTGCTTGCAGCTTCTATAT+AGG + chr8_2:66140826-66140845 None:intergenic 35.0%
TAGAAGCTGCAAGCAAATAT+TGG - chr8_2:66140829-66140848 Msa1263060:intron 35.0%
ACTGACGTTTATTAGAGAAG+TGG - chr8_2:66140889-66140908 Msa1263060:intron 35.0%
ATTAGAGAAGTGGAGGAATT+AGG - chr8_2:66140899-66140918 Msa1263060:intron 35.0%
!!! ACTACAATGTTTTTTCCACC+AGG + chr8_2:66140950-66140969 None:intergenic 35.0%
AAGAATCTCAGCAAAACCTT+TGG + chr8_2:66141059-66141078 None:intergenic 35.0%
! AACTTTGAAAGAAGAACTGC+TGG + chr8_2:66141096-66141115 None:intergenic 35.0%
TAGAGTCTGAAGATCTTGAT+TGG - chr8_2:66141116-66141135 Msa1263060:intron 35.0%
AAAGCACACACTGAGTATAA+TGG - chr8_2:66141181-66141200 Msa1263060:intron 35.0%
GTGACTAGTGACAAGTATAT+AGG - chr8_2:66141324-66141343 Msa1263060:intron 35.0%
ATGAGTGAATTGAGACCTAA+GGG + chr8_2:66141482-66141501 None:intergenic 35.0%
TATGAGTGAATTGAGACCTA+AGG + chr8_2:66141483-66141502 None:intergenic 35.0%
AGAGTTGTTAATAAGAGGGA+GGG + chr8_2:66141519-66141538 None:intergenic 35.0%
AAGAGTTGTTAATAAGAGGG+AGG + chr8_2:66141520-66141539 None:intergenic 35.0%
TTATTTGTAAGAAAGGGGGA+CGG + chr8_2:66141566-66141585 None:intergenic 35.0%
!!! GTCAGTTAGTTTTTAGGAGT+TGG + chr8_2:66141594-66141613 None:intergenic 35.0%
AAGACAAGGTGAAACTTTAG+AGG + chr8_2:66141662-66141681 None:intergenic 35.0%
TCACCTTGTCTTTAATGTGA+AGG - chr8_2:66141670-66141689 Msa1263060:CDS 35.0%
CACCTTGTCTTTAATGTGAA+GGG - chr8_2:66141671-66141690 Msa1263060:CDS 35.0%
ATCCCTTCACATTAAAGACA+AGG + chr8_2:66141676-66141695 None:intergenic 35.0%
GTGAAGGGATTTAACAAATC+AGG - chr8_2:66141686-66141705 Msa1263060:CDS 35.0%
GATTTAACAAATCAGGGACA+GGG - chr8_2:66141693-66141712 Msa1263060:CDS 35.0%
AAAAAATGATTCTTGGAGGC+AGG + chr8_2:66141786-66141805 None:intergenic 35.0%
CCAGAAAAAATGATTCTTGG+AGG + chr8_2:66141790-66141809 None:intergenic 35.0%
!!! CCTCCAAGAATCATTTTTTC+TGG - chr8_2:66141787-66141806 Msa1263060:CDS 35.0%
TCTTCTCTAATCTATGGTTG+GGG + chr8_2:66141888-66141907 None:intergenic 35.0%
GGGATTTCTTCTCTAATCTA+TGG + chr8_2:66141894-66141913 None:intergenic 35.0%
TAGATTAGAGAAGAAATCCC+TGG - chr8_2:66141894-66141913 Msa1263060:CDS 35.0%
!!! GGTTTTTGCCATTTTTGGTT+TGG - chr8_2:66142281-66142300 Msa1263060:CDS 35.0%
CTTTGTCTCATCCTAAACTT+TGG - chr8_2:66142323-66142342 Msa1263060:CDS 35.0%
TTCTGTGTACATTTCTGTCT+TGG - chr8_2:66142397-66142416 Msa1263060:CDS 35.0%
GGAATATCTGGATCAAATCA+TGG - chr8_2:66142454-66142473 Msa1263060:CDS 35.0%
TTTGGTGAAACCACTATTTG+AGG - chr8_2:66142524-66142543 Msa1263060:CDS 35.0%
TTGGTGAAACCACTATTTGA+GGG - chr8_2:66142525-66142544 Msa1263060:CDS 35.0%
!! ATATCTTAGTCTTGTAGAGG+AGG + chr8_2:66142553-66142572 None:intergenic 35.0%
AGCGATATAAGGTCATTTGA+AGG + chr8_2:66142583-66142602 None:intergenic 35.0%
GATGGTATCAGAAATGAAGA+AGG + chr8_2:66142616-66142635 None:intergenic 35.0%
TATCCAGGATCTCTTAATCT+AGG - chr8_2:66142797-66142816 Msa1263060:CDS 35.0%
TGAAAAAACTTGGCAGATAG+TGG - chr8_2:66142935-66142954 Msa1263060:CDS 35.0%
GAAAAAACTTGGCAGATAGT+GGG - chr8_2:66142936-66142955 Msa1263060:CDS 35.0%
AAAAAACTTGGCAGATAGTG+GGG - chr8_2:66142937-66142956 Msa1263060:CDS 35.0%
AATGACAGCTGAAGAAAAGA+AGG - chr8_2:66142962-66142981 Msa1263060:CDS 35.0%
ATTCATGGGACTTGTAAATG+TGG + chr8_2:66143058-66143077 None:intergenic 35.0%
ATTTACAAGTCCCATGAATC+TGG - chr8_2:66143059-66143078 Msa1263060:CDS 35.0%
GTCATTACCCAAGAACATAT+TGG - chr8_2:66143170-66143189 Msa1263060:five_prime_UTR 35.0%
ACTAGAGCCAATATGTTCTT+GGG + chr8_2:66143180-66143199 None:intergenic 35.0%
AACTAGAGCCAATATGTTCT+TGG + chr8_2:66143181-66143200 None:intergenic 35.0%
!!! GAACATATTGGCTCTAGTTT+TGG - chr8_2:66143182-66143201 Msa1263060:five_prime_UTR 35.0%
! TTCTCAAAGTATCCAACTAG+AGG + chr8_2:66143318-66143337 None:intergenic 35.0%
!!! TCTGTTTTGGAAAGTAGTCA+AGG - chr8_2:66143350-66143369 Msa1263060:five_prime_UTR 35.0%
!!! CTGTTTTGGAAAGTAGTCAA+GGG - chr8_2:66143351-66143370 Msa1263060:five_prime_UTR 35.0%
!! GTGTCTGTGGGTTTTTGTTT+GGG + chr8_2:66137478-66137497 None:intergenic 40.0%
! TGTGTCTGTGGGTTTTTGTT+TGG + chr8_2:66137479-66137498 None:intergenic 40.0%
!!! TGATGGAACTGAGCGTTTTT+TGG + chr8_2:66137502-66137521 None:intergenic 40.0%
TGATCAATTAACGGTGGTAG+TGG - chr8_2:66137710-66137729 Msa1263060:three_prime_UTR 40.0%
AAAAGGTTAGGGCTTTCGAT+CGG + chr8_2:66137812-66137831 None:intergenic 40.0%
ACTCTTCATTCTTCATGGAC+CGG - chr8_2:66137959-66137978 Msa1263060:CDS 40.0%
TCAATGGTAAACAGCTTCAG+TGG - chr8_2:66138179-66138198 Msa1263060:intron 40.0%
CAATGGTAAACAGCTTCAGT+GGG - chr8_2:66138180-66138199 Msa1263060:intron 40.0%
TTAACAACTTGCCAAGCTTG+AGG + chr8_2:66138283-66138302 None:intergenic 40.0%
GCAGAATCAGCATCAAGTTT+AGG + chr8_2:66138418-66138437 None:intergenic 40.0%
CAAGGTAACAAGAACGGAAA+TGG + chr8_2:66138476-66138495 None:intergenic 40.0%
TTCACCTTATACGGGGAATA+AGG - chr8_2:66138501-66138520 Msa1263060:intron 40.0%
ATGAAACGTCTTGGACAATG+AGG + chr8_2:66138572-66138591 None:intergenic 40.0%
AGCTGCTGAAATTTCACTTG+CGG - chr8_2:66138699-66138718 Msa1263060:intron 40.0%
TCTGAGGATGAGAATCACAA+AGG - chr8_2:66138724-66138743 Msa1263060:intron 40.0%
CTGAGGATGAGAATCACAAA+GGG - chr8_2:66138725-66138744 Msa1263060:intron 40.0%
TCAGCAAGTTCACGAACAAA+CGG + chr8_2:66138775-66138794 None:intergenic 40.0%
GAGGAATTTGGATTTGAGCT+TGG - chr8_2:66138804-66138823 Msa1263060:intron 40.0%
! ACAAAGGATTAGCAAGGGAA+GGG + chr8_2:66138834-66138853 None:intergenic 40.0%
! AACAAAGGATTAGCAAGGGA+AGG + chr8_2:66138835-66138854 None:intergenic 40.0%
ACTGATTGTACAACAGACGA+AGG + chr8_2:66138999-66139018 None:intergenic 40.0%
GAGATTCACTGACAAGGAAA+TGG - chr8_2:66139059-66139078 Msa1263060:intron 40.0%
TGACAAGGAAATGGTGTTTG+AGG - chr8_2:66139068-66139087 Msa1263060:intron 40.0%
TCTTGTACTCAAGAATCCAC+TGG + chr8_2:66139263-66139282 None:intergenic 40.0%
ATGTCACCAATTTCGAAGCT+AGG - chr8_2:66139283-66139302 Msa1263060:intron 40.0%
!!! GTGGTTTCTTTTGGTTTGTC+AGG - chr8_2:66139500-66139519 Msa1263060:intron 40.0%
! TTGTCAGGCACTTTTCAATC+AGG - chr8_2:66139515-66139534 Msa1263060:intron 40.0%
ACAAGATTTCTCCCCAATTC+TGG - chr8_2:66139573-66139592 Msa1263060:intron 40.0%
TAACACATGGCAAACAGCAA+AGG + chr8_2:66139634-66139653 None:intergenic 40.0%
!! TTTGCTGTTTGCCATGTGTT+AGG - chr8_2:66139633-66139652 Msa1263060:intron 40.0%
CTCTTCAGCTGCAATTTGTA+AGG + chr8_2:66139887-66139906 None:intergenic 40.0%
TTCATCGATATAGTCCTCCA+AGG + chr8_2:66140026-66140045 None:intergenic 40.0%
TGGAGGACTATATCGATGAA+AGG - chr8_2:66140026-66140045 Msa1263060:CDS 40.0%
AACATCTCATATGGCAAAGC+AGG - chr8_2:66140051-66140070 Msa1263060:CDS 40.0%
CCCTAAAACAGCCTCAAAAA+TGG + chr8_2:66140179-66140198 None:intergenic 40.0%
AGAAGCAACAGAAGGAAATG+TGG + chr8_2:66140215-66140234 None:intergenic 40.0%
! ATAGGATTGCTTGTTGCTTG+AGG - chr8_2:66140406-66140425 Msa1263060:intron 40.0%
CCACAATGTATGATGTACCT+TGG + chr8_2:66140552-66140571 None:intergenic 40.0%
CCAAGGTACATCATACATTG+TGG - chr8_2:66140549-66140568 Msa1263060:intron 40.0%
TTGATGCATAAGGTGCAAGT+TGG - chr8_2:66140719-66140738 Msa1263060:intron 40.0%
! TCGCGTGTTTTTCTTGCAAT+TGG - chr8_2:66140754-66140773 Msa1263060:intron 40.0%
! GTGTTTTTCTTGCAATTGGC+TGG - chr8_2:66140758-66140777 Msa1263060:intron 40.0%
TTGCAGCTTCTATATAGGTC+AGG + chr8_2:66140821-66140840 None:intergenic 40.0%
CTGCAAGCAAATATTGGAGA+TGG - chr8_2:66140835-66140854 Msa1263060:intron 40.0%
GACGTTTATTAGAGAAGTGG+AGG - chr8_2:66140892-66140911 Msa1263060:intron 40.0%
TTTCCAATCTTCGACGGAAA+TGG + chr8_2:66141164-66141183 None:intergenic 40.0%
!!! TCAGATATCTTGGTTTTGGG+AGG - chr8_2:66141222-66141241 Msa1263060:intron 40.0%
!! CTTTAGAGGCGAGTATTGAT+AGG + chr8_2:66141648-66141667 None:intergenic 40.0%
GGATTTAACAAATCAGGGAC+AGG - chr8_2:66141692-66141711 Msa1263060:CDS 40.0%
AACAACACTACAGGAACTTC+TGG + chr8_2:66141821-66141840 None:intergenic 40.0%
AGAAGTTCCTGTAGTGTTGT+TGG - chr8_2:66141820-66141839 Msa1263060:CDS 40.0%
! TTCCTGTAGTGTTGTTGGTT+TGG - chr8_2:66141825-66141844 Msa1263060:CDS 40.0%
ACAATGTGTAAGGTCATCCA+GGG + chr8_2:66141914-66141933 None:intergenic 40.0%
AATATTAAGCATCACCCAGC+AGG + chr8_2:66141972-66141991 None:intergenic 40.0%
TTTCTTCCAATGACCAACAC+AGG - chr8_2:66142253-66142272 Msa1263060:CDS 40.0%
CAAAAACCATTGTCCTGTGT+TGG + chr8_2:66142269-66142288 None:intergenic 40.0%
AAGAAGAATGAGGAGAGCTA+GGG + chr8_2:66142370-66142389 None:intergenic 40.0%
TAAGAAGAATGAGGAGAGCT+AGG + chr8_2:66142371-66142390 None:intergenic 40.0%
ATATTCCTGTCAAGAAGCCA+AGG + chr8_2:66142441-66142460 None:intergenic 40.0%
TCACCAAAAAGACGTCATGA+AGG + chr8_2:66142512-66142531 None:intergenic 40.0%
GAAATGAAGAAGGGTTGAGT+GGG + chr8_2:66142606-66142625 None:intergenic 40.0%
AGAAATGAAGAAGGGTTGAG+TGG + chr8_2:66142607-66142626 None:intergenic 40.0%
CAACCTAGATTAAGAGATCC+TGG + chr8_2:66142803-66142822 None:intergenic 40.0%
AAGACGATCACCAGATTCAT+GGG + chr8_2:66143072-66143091 None:intergenic 40.0%
CAGGCATAGATGAATAAGCT+GGG + chr8_2:66143130-66143149 None:intergenic 40.0%
ACAGGCATAGATGAATAAGC+TGG + chr8_2:66143131-66143150 None:intergenic 40.0%
!!! TTGGCTCTAGTTTTGGTACT+TGG - chr8_2:66143189-66143208 Msa1263060:five_prime_UTR 40.0%
! TGCAGCTTTGTACAGACTAT+AGG - chr8_2:66143275-66143294 Msa1263060:five_prime_UTR 40.0%
AATAGCTGATGGTTCGTCAT+CGG - chr8_2:66143469-66143488 Msa1263060:five_prime_UTR 40.0%
!! CTGTGGGTTTTTGTTTGGGT+TGG + chr8_2:66137474-66137493 None:intergenic 45.0%
!!! GCGTTTTTTGGTGTGTCTGT+GGG + chr8_2:66137490-66137509 None:intergenic 45.0%
!!! AGCGTTTTTTGGTGTGTCTG+TGG + chr8_2:66137491-66137510 None:intergenic 45.0%
!! TCAATTAACGGTGGTAGTGG+TGG - chr8_2:66137713-66137732 Msa1263060:three_prime_UTR 45.0%
GACGCTAATCTTCACCTTGT+TGG - chr8_2:66138235-66138254 Msa1263060:intron 45.0%
TACTACGCATTCGACCAACA+AGG + chr8_2:66138252-66138271 None:intergenic 45.0%
GTACAGAACATCCTCAAGCT+TGG - chr8_2:66138269-66138288 Msa1263060:intron 45.0%
GGTAACAAGAACGGAAATGG+CGG + chr8_2:66138473-66138492 None:intergenic 45.0%
!! CAAGCCTTATTCCCCGTATA+AGG + chr8_2:66138508-66138527 None:intergenic 45.0%
AATTTCACTTGCGGCATCTG+AGG - chr8_2:66138708-66138727 Msa1263060:intron 45.0%
GGATGAGAATCACAAAGGGT+TGG - chr8_2:66138729-66138748 Msa1263060:intron 45.0%
!! GAATCACAAAGGGTTGGTGT+TGG - chr8_2:66138735-66138754 Msa1263060:intron 45.0%
! CAAAGGATTAGCAAGGGAAG+GGG + chr8_2:66138833-66138852 None:intergenic 45.0%
!! AAGCCTTTTTAGTCCCTGTG+AGG - chr8_2:66138875-66138894 Msa1263060:intron 45.0%
AGTCCTCACAGGGACTAAAA+AGG + chr8_2:66138881-66138900 None:intergenic 45.0%
!! TTTTTAGTCCCTGTGAGGAC+TGG - chr8_2:66138880-66138899 Msa1263060:intron 45.0%
CAGCAGGACAAGAACAAGAA+TGG - chr8_2:66138949-66138968 Msa1263060:intron 45.0%
GGACAAGAGATTCACTGACA+AGG - chr8_2:66139053-66139072 Msa1263060:intron 45.0%
AAGAATCCACTGGTGTTCGT+CGG + chr8_2:66139253-66139272 None:intergenic 45.0%
TCACCAATTTCGAAGCTAGG+AGG - chr8_2:66139286-66139305 Msa1263060:intron 45.0%
ATGCCTCCTAGCTTCGAAAT+TGG + chr8_2:66139292-66139311 None:intergenic 45.0%
TCGTAGTCTTCTTTCACCTC+CGG + chr8_2:66139333-66139352 None:intergenic 45.0%
TGCATGAGATGCTCATTGAC+AGG - chr8_2:66139358-66139377 Msa1263060:intron 45.0%
! TCTTGTTCGATCTTTTGGGC+AGG + chr8_2:66139559-66139578 None:intergenic 45.0%
CAAATTGCAGCTGAAGAGTG+AGG - chr8_2:66139889-66139908 Msa1263060:CDS 45.0%
GCTGAAGAGTGAGGATTTAG+TGG - chr8_2:66139898-66139917 Msa1263060:CDS 45.0%
! TTAGTGGCAAAAAGCGCATG+TGG + chr8_2:66140356-66140375 None:intergenic 45.0%
CTTGAGTACTTCAGCTTCTG+TGG - chr8_2:66140677-66140696 Msa1263060:intron 45.0%
AAGTGGAGGAATTAGGACAG+AGG - chr8_2:66140906-66140925 Msa1263060:intron 45.0%
TGTAACATCCATAGCTGAGC+AGG - chr8_2:66141021-66141040 Msa1263060:intron 45.0%
CAGGTTTCACACTTTGCCAA+AGG - chr8_2:66141040-66141059 Msa1263060:intron 45.0%
ATCTTGATTGGATGCTGCGT+GGG - chr8_2:66141128-66141147 Msa1263060:intron 45.0%
! ATGCCATTTCCGTCGAAGAT+TGG - chr8_2:66141158-66141177 Msa1263060:intron 45.0%
GTGTGCTTTCCAATCTTCGA+CGG + chr8_2:66141170-66141189 None:intergenic 45.0%
CTTAGAGACTCTGATGCAGT+GGG + chr8_2:66141361-66141380 None:intergenic 45.0%
TCTTAGAGACTCTGATGCAG+TGG + chr8_2:66141362-66141381 None:intergenic 45.0%
TGAATTGAGACCTAAGGGCA+AGG + chr8_2:66141477-66141496 None:intergenic 45.0%
AGAAAGGGGGACGGAATAAT+TGG + chr8_2:66141557-66141576 None:intergenic 45.0%
!! GGCGAGTATTGATAGGTGAT+CGG + chr8_2:66141641-66141660 None:intergenic 45.0%
TAACAAATCAGGGACAGGGA+CGG - chr8_2:66141697-66141716 Msa1263060:CDS 45.0%
!! TGTAGTGTTGTTGGTTTGGC+CGG - chr8_2:66141829-66141848 Msa1263060:CDS 45.0%
GACAATGTGTAAGGTCATCC+AGG + chr8_2:66141915-66141934 None:intergenic 45.0%
AAATGCACGAGCAACATCCA+TGG + chr8_2:66142150-66142169 None:intergenic 45.0%
! TATGGGTTGCATTGCACTGA+GGG + chr8_2:66142193-66142212 None:intergenic 45.0%
! TTATGGGTTGCATTGCACTG+AGG + chr8_2:66142194-66142213 None:intergenic 45.0%
! CATTGTCCTGTGTTGGTCAT+TGG + chr8_2:66142262-66142281 None:intergenic 45.0%
CAATGACCAACACAGGACAA+TGG - chr8_2:66142260-66142279 Msa1263060:CDS 45.0%
TGGACGGAGAACCAAAGTTT+AGG + chr8_2:66142337-66142356 None:intergenic 45.0%
! TCTCATCTTGAGTACTGCCT+TGG - chr8_2:66142421-66142440 Msa1263060:CDS 45.0%
GGCTTCTTGACAGGAATATC+TGG - chr8_2:66142442-66142461 Msa1263060:CDS 45.0%
CGTCATGAAGGACCTTTAGA+AGG + chr8_2:66142500-66142519 None:intergenic 45.0%
! GGTCCTTCATGACGTCTTTT+TGG - chr8_2:66142506-66142525 Msa1263060:CDS 45.0%
TTACCAGTTGAAGGCTTTCG+TGG - chr8_2:66143017-66143036 Msa1263060:CDS 45.0%
AAACCACGAAAGCCTTCAAC+TGG + chr8_2:66143023-66143042 None:intergenic 45.0%
AGTTGAAGGCTTTCGTGGTT+TGG - chr8_2:66143022-66143041 Msa1263060:CDS 45.0%
GTTGAAGGCTTTCGTGGTTT+GGG - chr8_2:66143023-66143042 Msa1263060:CDS 45.0%
GGACTTGTAAATGTGGAGAC+GGG + chr8_2:66143051-66143070 None:intergenic 45.0%
GGGACTTGTAAATGTGGAGA+CGG + chr8_2:66143052-66143071 None:intergenic 45.0%
GAAGACGATCACCAGATTCA+TGG + chr8_2:66143073-66143092 None:intergenic 45.0%
TTAAGACGAGCTTGCATGAC+AGG + chr8_2:66143149-66143168 None:intergenic 45.0%
TGGTGAACATACCTGCAATC+TGG - chr8_2:66143209-66143228 Msa1263060:five_prime_UTR 45.0%
CCAGTTTCTTTCCAGATTGC+AGG + chr8_2:66143223-66143242 None:intergenic 45.0%
CCTGCAATCTGGAAAGAAAC+TGG - chr8_2:66143220-66143239 Msa1263060:five_prime_UTR 45.0%
CCAACTAGAGGACAACAGAT+GGG + chr8_2:66143306-66143325 None:intergenic 45.0%
TCCAACTAGAGGACAACAGA+TGG + chr8_2:66143307-66143326 None:intergenic 45.0%
ATAGCTGATGGTTCGTCATC+GGG - chr8_2:66143470-66143489 Msa1263060:five_prime_UTR 45.0%
!! GTGGTAGTGGTGGAAGTAGA+CGG - chr8_2:66137723-66137742 Msa1263060:three_prime_UTR 50.0%
CTTCATTCTTCATGGACCGG+TGG - chr8_2:66137962-66137981 Msa1263060:CDS 50.0%
TCAGTGGGAACAAACACTCG+CGG - chr8_2:66138195-66138214 Msa1263060:intron 50.0%
GTCCAAGACGTTTCATACGC+AGG - chr8_2:66138576-66138595 Msa1263060:intron 50.0%
AGCCTGCGTATGAAACGTCT+TGG + chr8_2:66138581-66138600 None:intergenic 50.0%
!! CAAAGGGTTGGTGTTGGTTC+AGG - chr8_2:66138741-66138760 Msa1263060:intron 50.0%
GGTGGTAAGCAACACAACCA+CGG + chr8_2:66138927-66138946 None:intergenic 50.0%
TCTTGTTCTTGTCCTGCTGC+TGG + chr8_2:66138948-66138967 None:intergenic 50.0%
! GAAAGATAGAGAGAGCACGC+AGG + chr8_2:66139108-66139127 None:intergenic 50.0%
AGCCATGATGATATTCCCGG+AGG - chr8_2:66139314-66139333 Msa1263060:intron 50.0%
CACCTCCGGGAATATCATCA+TGG + chr8_2:66139319-66139338 None:intergenic 50.0%
CGTAGTCTTCTTTCACCTCC+GGG + chr8_2:66139332-66139351 None:intergenic 50.0%
GGAGGTGAAAGAAGACTACG+AGG - chr8_2:66139332-66139351 Msa1263060:intron 50.0%
ACTGCGTGCTGGACTGTTTA+TGG - chr8_2:66139434-66139453 Msa1263060:intron 50.0%
! GCTGAGGGAGTGGTTTCTTT+TGG - chr8_2:66139491-66139510 Msa1263060:intron 50.0%
! TGGCAAAAAGCGCATGTGGT+TGG + chr8_2:66140352-66140371 None:intergenic 50.0%
! TTTTTCCACCAGGACACAGC+TGG + chr8_2:66140940-66140959 None:intergenic 50.0%
GTGTGAAACCTGCTCAGCTA+TGG + chr8_2:66141032-66141051 None:intergenic 50.0%
GATCTTGATTGGATGCTGCG+TGG - chr8_2:66141127-66141146 Msa1263060:intron 50.0%
GTTCTGCAGAGCTGTCACAA+AGG + chr8_2:66141436-66141455 None:intergenic 50.0%
TCTGTAACCACCTTGCCCTT+AGG - chr8_2:66141464-66141483 Msa1263060:CDS 50.0%
ATTGAGACCTAAGGGCAAGG+TGG + chr8_2:66141474-66141493 None:intergenic 50.0%
AACAAATCAGGGACAGGGAC+GGG - chr8_2:66141698-66141717 Msa1263060:CDS 50.0%
ACGGGAACAGCCAAATGACT+TGG - chr8_2:66141716-66141735 Msa1263060:CDS 50.0%
GGCCAAACCAACAACACTAC+AGG + chr8_2:66141830-66141849 None:intergenic 50.0%
AGAAGAGAGGGCTTGAAAGC+AGG + chr8_2:66141859-66141878 None:intergenic 50.0%
TTGGGGACACACAGAAGAGA+GGG + chr8_2:66141871-66141890 None:intergenic 50.0%
CATATGCAGTGTGACCTGCT+GGG - chr8_2:66141955-66141974 Msa1263060:CDS 50.0%
GAGCAACATCCATGGATGAG+AGG + chr8_2:66142142-66142161 None:intergenic 50.0%
CTAGGGATCTTGGAACTGGA+CGG + chr8_2:66142353-66142372 None:intergenic 50.0%
AGAGCTAGGGATCTTGGAAC+TGG + chr8_2:66142357-66142376 None:intergenic 50.0%
ATGAGGAGAGCTAGGGATCT+TGG + chr8_2:66142363-66142382 None:intergenic 50.0%
TACTGCCTTGGCTTCTTGAC+AGG - chr8_2:66142433-66142452 Msa1263060:CDS 50.0%
GAGGAGGTTCCCTCAAATAG+TGG + chr8_2:66142537-66142556 None:intergenic 50.0%
GGTTGAGTGGGAGCGATATA+AGG + chr8_2:66142594-66142613 None:intergenic 50.0%
CCCATCTGTTGTCCTCTAGT+TGG - chr8_2:66143303-66143322 Msa1263060:five_prime_UTR 50.0%
!!! GTTGTCGTTTTCGCCGTCGT+CGG + chr8_2:66137751-66137770 None:intergenic 55.0%
CATTCTTCATGGACCGGTGG+TGG - chr8_2:66137965-66137984 Msa1263060:CDS 55.0%
GAACAAACACTCGCGGAGTG+TGG - chr8_2:66138202-66138221 Msa1263060:intron 55.0%
GCTCGATTCCAGTCCTCACA+GGG + chr8_2:66138891-66138910 None:intergenic 55.0%
TGCTCGATTCCAGTCCTCAC+AGG + chr8_2:66138892-66138911 None:intergenic 55.0%
GACTGGAATCGAGCAGCAAC+AGG - chr8_2:66138897-66138916 Msa1263060:intron 55.0%
! TGTTGCTTACCACCAGCAGC+AGG - chr8_2:66138933-66138952 Msa1263060:intron 55.0%
TGTTCTTGTCCTGCTGCTGG+TGG + chr8_2:66138945-66138964 None:intergenic 55.0%
AGTCCAGCACGCAGTGATTC+GGG + chr8_2:66139429-66139448 None:intergenic 55.0%
CAGTCCAGCACGCAGTGATT+CGG + chr8_2:66139430-66139449 None:intergenic 55.0%
AATGAAGAAGCCACTGGCCC+CGG - chr8_2:66139465-66139484 Msa1263060:intron 55.0%
AAACCACTCCCTCAGCACAC+CGG + chr8_2:66139487-66139506 None:intergenic 55.0%
AAAGCGATCCAGCTGTGTCC+TGG - chr8_2:66140929-66140948 Msa1263060:intron 55.0%
GGGCTTGAAAGCAGGCAATC+CGG + chr8_2:66141851-66141870 None:intergenic 55.0%
GTTGGGGACACACAGAAGAG+AGG + chr8_2:66141872-66141891 None:intergenic 55.0%
CCAGCAGGTCACACTGCATA+TGG + chr8_2:66141957-66141976 None:intergenic 55.0%
CCATATGCAGTGTGACCTGC+TGG - chr8_2:66141954-66141973 Msa1263060:CDS 55.0%
GAGTGGGCCGTAGTGAAAAG+TGG + chr8_2:66142014-66142033 None:intergenic 55.0%
GTGCGACATCCTCTCATCCA+TGG - chr8_2:66142130-66142149 Msa1263060:CDS 55.0%
GGTTGCATTGCACTGAGGGT+TGG + chr8_2:66142189-66142208 None:intergenic 55.0%
ATGGTTCGTCATCGGGAGTG+TGG - chr8_2:66143477-66143496 Msa1263060:five_prime_UTR 55.0%
!! GAAGTAGACGGCACCGACGA+CGG - chr8_2:66137735-66137754 Msa1263060:three_prime_UTR 60.0%
! TCTTCATGGACCGGTGGTGG+TGG - chr8_2:66137968-66137987 Msa1263060:CDS 60.0%
GCTAGAACCACCACCACCAC+CGG + chr8_2:66137981-66138000 None:intergenic 60.0%
!! GGTGGTGGTGGTGGTTCTAG+CGG - chr8_2:66137980-66137999 Msa1263060:CDS 60.0%
GATCCCGAATCACTGCGTGC+TGG - chr8_2:66139423-66139442 Msa1263060:intron 60.0%
AACCACTCCCTCAGCACACC+GGG + chr8_2:66139486-66139505 None:intergenic 60.0%
!! TCATGGACCGGTGGTGGTGG+TGG - chr8_2:66137971-66137990 Msa1263060:CDS 65.0%
!! GGTGGTGGTGGTTCTAGCGG+CGG - chr8_2:66137983-66138002 Msa1263060:CDS 65.0%
TCATACGCAGGCTGCGCGTG+TGG - chr8_2:66138588-66138607 Msa1263060:intron 65.0%
GAGCAGCAACAGGCTCTCCG+TGG - chr8_2:66138907-66138926 Msa1263060:intron 65.0%
AGAGGGCCGACGAACACCAG+TGG - chr8_2:66139244-66139263 Msa1263060:intron 65.0%
ACCACTCCCTCAGCACACCG+GGG + chr8_2:66139485-66139504 None:intergenic 65.0%
GCGATCCAGCTGTGTCCTGG+TGG - chr8_2:66140932-66140951 Msa1263060:intron 65.0%
!! GGTGGTTCTAGCGGCGGCGA+TGG - chr8_2:66137989-66138008 Msa1263060:CDS 70.0%
! GGTTCTAGCGGCGGCGATGG+TGG - chr8_2:66137992-66138011 Msa1263060:CDS 70.0%
! TCTAGCGGCGGCGATGGTGG+TGG - chr8_2:66137995-66138014 Msa1263060:CDS 70.0%
CACTGGCCCCGGTGTGCTGA+GGG - chr8_2:66139476-66139495 Msa1263060:intron 70.0%
GCAGGCTGCGCGTGTGGCGT+TGG - chr8_2:66138594-66138613 Msa1263060:intron 75.0%
CCTCAGCACACCGGGGCCAG+TGG + chr8_2:66139478-66139497 None:intergenic 75.0%
CCACTGGCCCCGGTGTGCTG+AGG - chr8_2:66139475-66139494 Msa1263060:intron 75.0%
GCCCCGGTGTGCTGAGGGAG+TGG - chr8_2:66139481-66139500 Msa1263060:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 66137393 66143576 66137393 ID=Msa1263060;Name=Msa1263060
chr8_2 mRNA 66137393 66143576 66137393 ID=Msa1263060-mRNA-1;Parent=Msa1263060;Name=Msa1263060-mRNA-1;_AED=0.02;_eAED=0.02;_QI=410|1|1|1|1|1|3|362|882
chr8_2 exon 66137393 66138018 66137393 ID=Msa1263060-mRNA-1:exon:21556;Parent=Msa1263060-mRNA-1
chr8_2 exon 66139726 66140318 66139726 ID=Msa1263060-mRNA-1:exon:21555;Parent=Msa1263060-mRNA-1
chr8_2 exon 66141375 66143576 66141375 ID=Msa1263060-mRNA-1:exon:21554;Parent=Msa1263060-mRNA-1
chr8_2 five_prime_UTR 66143167 66143576 66143167 ID=Msa1263060-mRNA-1:five_prime_utr;Parent=Msa1263060-mRNA-1
chr8_2 CDS 66141375 66143166 66141375 ID=Msa1263060-mRNA-1:cds;Parent=Msa1263060-mRNA-1
chr8_2 CDS 66139726 66140318 66139726 ID=Msa1263060-mRNA-1:cds;Parent=Msa1263060-mRNA-1
chr8_2 CDS 66137755 66138018 66137755 ID=Msa1263060-mRNA-1:cds;Parent=Msa1263060-mRNA-1
chr8_2 three_prime_UTR 66137393 66137754 66137393 ID=Msa1263060-mRNA-1:three_prime_utr;Parent=Msa1263060-mRNA-1
Gene Sequence

>Msa1263060

ATGACTCCGATCGAAAGCCCTAACCTTTTTCAACAACAACAACAACAACAAAATCGTTCTTCGTCCAAACGAAAATTAGACGAAGACGACGAAAACAACGCGTTAGATGATGACTTAGTCTATGTTAGAATGAGAAAAGACGAAACCACAAAAACAACTCTTCATTCTTCATGGACCGGTGGTGGTGGTGGTTCTAGCGGCGGCGATGGTGGTGGTGTTTTCTCTAAGAAAAAATCACCTATTCATTTCTTCATTCGAATGATGTCAAAAGGATACAACGTTGTTATACACGCTTATCCAGAAGAAACAGTGAAATCAATTCACGAACGAATTGAAGAAATGAAAGGAATTCCTCTTTTTGAACAGAGGTTGATTTTCAATGGTAAACAGCTTCAGTGGGAACAAACACTCGCGGAGTGTGGAATTCAAAACGACGCTAATCTTCACCTTGTTGGTCGAATGCGTAGTACAGAACATCCTCAAGCTTGGCAAGTTGTTAATGATATGGTTTCTATTGTTTATGATCTTTGTCATGGTGTTAATCTTCCTGACGCTGTTAAATCTATTAAGAGTTTGCTTACTACTTATATTAATTTGGCTTTGGCACCTAAACCTAAACTTGATGCTGATTCTGCTACTAGTTATTTTCAGATTTTCATGAATTCTTCCGCCATTTCCGTTCTTGTTACCTTGTATGTTTCACCTTATACGGGGAATAAGGCTTGTTCTGATACTTGTATTAAGCATTTTTTGAATGGTTGTAAAACCTCATTGTCCAAGACGTTTCATACGCAGGCTGCGCGTGTGGCGTTGGAGTTTTGTAAATTGCTTAGTAGAGTTGGGACTAATGATCCTTTGTATCTTTTTTGTCGTACTAGTTTGGGGTTTTTTTTGGAAGCTGCTGAAATTTCACTTGCGGCATCTGAGGATGAGAATCACAAAGGGTTGGTGTTGGTTCAGGATTTGTTTCCGTTTGTTCGTGAACTTGCTGATAGTTTGTTGAGGAATTTGGATTTGAGCTTGGAATCCCCTTCCCTTGCTAATCCTTTGTTGAACAATGTTGAGGATTTTCAAGCCTTTTTAGTCCCTGTGAGGACTGGAATCGAGCAGCAACAGGCTCTCCGTGGTTGTGTTGCTTACCACCAGCAGCAGGACAAGAACAAGAATGGATTAGTTGCTGAAGAGATTGAATACCTTCGTCTGTTGTACAATCAGTTGTTGTCCAAAATTGATACTTGCCTTCAAAAAATGGACAAGAGATTCACTGACAAGGAAATGGTGTTTGAGGAAAATTATTTTTATCCTGCGTGCTCTCTCTATCTTTCAATTTTGAAGGAATTGCATAAGATTTCTAAGCTTTATGATGGTGCTACAGAAGAGCTCTGTCATGTTTTGATGTGTCGAAAGAGTGTGATGTGTCTGATCATCGTTAAATATGCAAAGAGGGCCGACGAACACCAGTGGATTCTTGAGTACAAGAATGTCACCAATTTCGAAGCTAGGAGGCATTTAGCCATGATGATATTCCCGGAGGTGAAAGAAGACTACGAGGAGTTGCATGAGATGCTCATTGACAGGTCTCAGCTGTTAACTGAATCTTTTGAATACATTGCACGGGCTGATCCCGAATCACTGCGTGCTGGACTGTTTATGGAATTCAAAAATGAAGAAGCCACTGGCCCCGGTGTGCTGAGGGAGTGGTTTCTTTTGGTTTGTCAGGCACTTTTCAATCAGGAACATGCTCTTTTTGTTGCCTGCCCAAAAGATCGAACAAGATTTCTCCCCAATTCTGCTTCCAAGGTACAACATAATCTGCATCTTGAGTACTTCAGCTTCTGTGGTCGAGTTATTGCATTAGCTTTGATGCATAAGGTGCAAGTTGGTATTGTTTTTGATCGCGTGTTTTTCTTGCAATTGGCTGGAAAGCCTATTACTTTAGAAGACATAAAGGATGCAGATCCTGACCTATATAGAAGCTGCAAGCAAATATTGGAGATGGATTCTGATTTCATTGATTCAGATGCATTAGGACTGACGTTTATTAGAGAAGTGGAGGAATTAGGACAGAGGAAAGCGATCCAGCTGTGTCCTGGTGGAAAAAACATTGTAGTTAATAGTAAGAACAGGGTGAAGTATGTTGATCTTCTTATAAAGGATCGTTTTGTAACATCCATAGCTGAGCAGGTTTCACACTTTGCCAAAGGTTTTGCTGAGATTCTTTCAAGTTCAAAGCTCCAGCAGTTCTTCTTTCAAAGTTTAGAGTCTGAAGATCTTGATTGGATGCTGCGTGGGAGTGAAGATGCCATTTCCGTCGAAGATTGGAAAGCACACACTGAGTATAATGGCTATACAGACACAGATATTCAGATATCTTGGTTTTGGGAGATAGTGGGGAGAATGACAGCTGAAGAAAAGAAGGTTCTTCTTTTCTTTTGGACGTCTGTGAAATATTTACCAGTTGAAGGCTTTCGTGGTTTGGGTTCCCGTCTCCACATTTACAAGTCCCATGAATCTGGTGATCGTCTTCCTTCATCTCATACATGCTTTTATCGGCTGTGTTTCCCAGCTTATTCATCTATGCCTGTCATGCAAGCTCGTCTTAAAGTCATTACCCAAGAACATATTGGCTCTAGTTTTGGTACTTGGTGA
Protein sequence

>Msa1263060

MTPIESPNLFQQQQQQQNRSSSKRKLDEDDENNALDDDLVYVRMRKDETTKTTLHSSWTGGGGGSSGGDGGGVFSKKKSPIHFFIRMMSKGYNVVIHAYPEETVKSIHERIEEMKGIPLFEQRLIFNGKQLQWEQTLAECGIQNDANLHLVGRMRSTEHPQAWQVVNDMVSIVYDLCHGVNLPDAVKSIKSLLTTYINLALAPKPKLDADSATSYFQIFMNSSAISVLVTLYVSPYTGNKACSDTCIKHFLNGCKTSLSKTFHTQAARVALEFCKLLSRVGTNDPLYLFCRTSLGFFLEAAEISLAASEDENHKGLVLVQDLFPFVRELADSLLRNLDLSLESPSLANPLLNNVEDFQAFLVPVRTGIEQQQALRGCVAYHQQQDKNKNGLVAEEIEYLRLLYNQLLSKIDTCLQKMDKRFTDKEMVFEENYFYPACSLYLSILKELHKISKLYDGATEELCHVLMCRKSVMCLIIVKYAKRADEHQWILEYKNVTNFEARRHLAMMIFPEVKEDYEELHEMLIDRSQLLTESFEYIARADPESLRAGLFMEFKNEEATGPGVLREWFLLVCQALFNQEHALFVACPKDRTRFLPNSASKVQHNLHLEYFSFCGRVIALALMHKVQVGIVFDRVFFLQLAGKPITLEDIKDADPDLYRSCKQILEMDSDFIDSDALGLTFIREVEELGQRKAIQLCPGGKNIVVNSKNRVKYVDLLIKDRFVTSIAEQVSHFAKGFAEILSSSKLQQFFFQSLESEDLDWMLRGSEDAISVEDWKAHTEYNGYTDTDIQISWFWEIVGRMTAEEKKVLLFFWTSVKYLPVEGFRGLGSRLHIYKSHESGDRLPSSHTCFYRLCFPAYSSMPVMQARLKVITQEHIGSSFGTW*