Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346420 | XP_013460891.1 | 91.552 | 509 | 43 | 0 | 1 | 509 | 1 | 509 | 0.0 | 948 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346420 | sp|Q93Y91|STP5_ARATH | 58.250 | 503 | 206 | 3 | 1 | 500 | 1 | 502 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346420 | A0A072V9T5 | 91.552 | 509 | 43 | 0 | 1 | 509 | 1 | 509 | 0.0 | 948 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1346420 | 0.803048 | 4.198931e-49 | -8.615850e-47 |
| Msa0017510 | Msa1346420 | 0.808502 | 3.001144e-50 | -8.615850e-47 |
| Msa0043560 | Msa1346420 | 0.808676 | 2.755158e-50 | -8.615850e-47 |
| Msa0046100 | Msa1346420 | 0.801872 | 7.334925e-49 | -8.615850e-47 |
| Msa0061340 | Msa1346420 | 0.801678 | 8.039342e-49 | -8.615850e-47 |
| Msa1346420 | Msa1353470 | 0.816819 | 4.542458e-52 | -8.615850e-47 |
| Msa1346420 | Msa1355370 | 0.874008 | 9.446557e-68 | -8.615850e-47 |
| Msa1346420 | Msa1408620 | -0.807525 | 4.843317e-50 | -8.615850e-47 |
| Msa1346420 | Msa1422420 | 0.800979 | 1.117726e-48 | -8.615850e-47 |
| Msa1346420 | Msa1440960 | 0.808760 | 2.643822e-50 | -8.615850e-47 |
| Msa0626450 | Msa1346420 | 0.822400 | 2.417426e-53 | -8.615850e-47 |
| Msa0626490 | Msa1346420 | 0.821323 | 4.291634e-53 | -8.615850e-47 |
| Msa0664600 | Msa1346420 | 0.824881 | 6.347553e-54 | -8.615850e-47 |
| Msa0735170 | Msa1346420 | 0.812434 | 4.248313e-51 | -8.615850e-47 |
| Msa0760130 | Msa1346420 | 0.817296 | 3.548581e-52 | -8.615850e-47 |
| Msa0768990 | Msa1346420 | 0.807888 | 4.055568e-50 | -8.615850e-47 |
| Msa0769180 | Msa1346420 | 0.800398 | 1.468609e-48 | -8.615850e-47 |
| Msa0832340 | Msa1346420 | 0.823968 | 1.040530e-53 | -8.615850e-47 |
| Msa0157290 | Msa1346420 | 0.809368 | 1.958829e-50 | -8.615850e-47 |
| Msa0211150 | Msa1346420 | 0.807670 | 4.511844e-50 | -8.615850e-47 |
| Msa0218810 | Msa1346420 | 0.807501 | 4.900914e-50 | -8.615850e-47 |
| Msa1269480 | Msa1346420 | 0.804686 | 1.918011e-49 | -8.615850e-47 |
| Msa1274520 | Msa1346420 | 0.806993 | 6.280685e-50 | -8.615850e-47 |
| Msa1284680 | Msa1346420 | 0.803058 | 4.179183e-49 | -8.615850e-47 |
| Msa1328710 | Msa1346420 | 0.817314 | 3.516842e-52 | -8.615850e-47 |
| Msa0367870 | Msa1346420 | 0.813264 | 2.795573e-51 | -8.615850e-47 |
| Msa0388960 | Msa1346420 | 0.806182 | 9.315877e-50 | -8.615850e-47 |
| Msa0392510 | Msa1346420 | 0.815689 | 8.126940e-52 | -8.615850e-47 |
| Msa0418190 | Msa1346420 | 0.918629 | 1.230919e-86 | -8.615850e-47 |
| Msa0464260 | Msa1346420 | 0.976390 | 9.811682e-142 | -8.615850e-47 |
| Msa0464680 | Msa1346420 | 0.818074 | 2.370064e-52 | -8.615850e-47 |
| Msa0467430 | Msa1346420 | 0.819222 | 1.300754e-52 | -8.615850e-47 |
| Msa0989220 | Msa1346420 | 0.807983 | 3.871005e-50 | -8.615850e-47 |
| Msa0990350 | Msa1346420 | 0.803440 | 3.482543e-49 | -8.615850e-47 |
| Msa1005870 | Msa1346420 | 0.819662 | 1.032585e-52 | -8.615850e-47 |
| Msa1019430 | Msa1346420 | 0.805086 | 1.582114e-49 | -8.615850e-47 |
| Msa1019470 | Msa1346420 | 0.801310 | 9.564367e-49 | -8.615850e-47 |
| Msa1092010 | Msa1346420 | 0.815879 | 7.373124e-52 | -8.615850e-47 |
| Msa0254790 | Msa1346420 | 0.801244 | 9.864319e-49 | -8.615850e-47 |
| Msa0258310 | Msa1346420 | 0.811151 | 8.078589e-51 | -8.615850e-47 |
| Msa0300690 | Msa1346420 | 0.800474 | 1.416922e-48 | -8.615850e-47 |
| Msa0341540 | Msa1346420 | 0.801373 | 9.285194e-49 | -8.615850e-47 |
| Msa0345330 | Msa1346420 | 0.809796 | 1.585027e-50 | -8.615850e-47 |
| Msa0345410 | Msa1346420 | 0.807595 | 4.682010e-50 | -8.615850e-47 |
| Msa1121490 | Msa1346420 | 0.832224 | 1.068094e-55 | -8.615850e-47 |
| Msa1137570 | Msa1346420 | 0.839468 | 1.555896e-57 | -8.615850e-47 |
| Msa1196440 | Msa1346420 | 0.803084 | 4.126339e-49 | -8.615850e-47 |
| Msa1199570 | Msa1346420 | 0.813399 | 2.610420e-51 | -8.615850e-47 |
| Msa1199830 | Msa1346420 | -0.815549 | 8.734284e-52 | -8.615850e-47 |
| Msa0495330 | Msa1346420 | 0.815205 | 1.041644e-51 | -8.615850e-47 |
| Msa0516170 | Msa1346420 | 0.801519 | 8.668328e-49 | -8.615850e-47 |
| Msa0861510 | Msa1346420 | 0.801289 | 9.657755e-49 | -8.615850e-47 |
| Msa0861600 | Msa1346420 | 0.801399 | 9.171745e-49 | -8.615850e-47 |
| Msa0875290 | Msa1346420 | 0.806609 | 7.568342e-50 | -8.615850e-47 |
| Msa0880140 | Msa1346420 | 0.804111 | 2.526857e-49 | -8.615850e-47 |
| Msa0909140 | Msa1346420 | 0.804651 | 1.949835e-49 | -8.615850e-47 |
| Msa0948290 | Msa1346420 | 0.808501 | 3.002441e-50 | -8.615850e-47 |
| Msa0967380 | Msa1346420 | 0.807427 | 5.082469e-50 | -8.615850e-47 |
| Msa0969520 | Msa1346420 | 0.816973 | 4.194433e-52 | -8.615850e-47 |
| Msa0974080 | Msa1346420 | 0.809055 | 2.285956e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346420 | MtrunA17_Chr3g0115781 | 91.552 | 509 | 43 | 0 | 1 | 509 | 1 | 509 | 0.0 | 948 |
| Msa1346420 | MtrunA17_Chr3g0115741 | 80.000 | 510 | 101 | 1 | 1 | 509 | 1 | 510 | 0.0 | 836 |
| Msa1346420 | MtrunA17_Chr3g0115751 | 77.930 | 512 | 110 | 1 | 1 | 509 | 1 | 512 | 0.0 | 820 |
| Msa1346420 | MtrunA17_Chr3g0115721 | 75.049 | 509 | 125 | 1 | 1 | 509 | 1 | 507 | 0.0 | 799 |
| Msa1346420 | MtrunA17_Chr3g0115731 | 69.941 | 509 | 116 | 5 | 1 | 502 | 1 | 479 | 0.0 | 708 |
| Msa1346420 | MtrunA17_Chr3g0115711 | 65.269 | 501 | 171 | 2 | 1 | 501 | 1 | 498 | 0.0 | 694 |
| Msa1346420 | MtrunA17_Chr3g0078971 | 52.419 | 496 | 227 | 7 | 17 | 508 | 15 | 505 | 0.0 | 536 |
| Msa1346420 | MtrunA17_Chr3g0078991 | 52.684 | 503 | 230 | 6 | 10 | 507 | 8 | 507 | 0.0 | 529 |
| Msa1346420 | MtrunA17_Chr5g0394341 | 49.395 | 496 | 241 | 7 | 16 | 505 | 13 | 504 | 1.05e-179 | 514 |
| Msa1346420 | MtrunA17_Chr4g0065311 | 49.795 | 488 | 240 | 4 | 11 | 497 | 7 | 490 | 7.07e-179 | 511 |
| Msa1346420 | MtrunA17_Chr5g0445601 | 51.205 | 498 | 236 | 5 | 1 | 495 | 1 | 494 | 4.65e-173 | 497 |
| Msa1346420 | MtrunA17_Chr7g0257631 | 51.205 | 498 | 236 | 5 | 1 | 495 | 35 | 528 | 3.07e-172 | 496 |
| Msa1346420 | MtrunA17_Chr4g0065324 | 48.884 | 493 | 246 | 5 | 4 | 495 | 9 | 496 | 2.72e-170 | 490 |
| Msa1346420 | MtrunA17_Chr5g0420841 | 48.785 | 494 | 246 | 5 | 15 | 503 | 11 | 502 | 1.98e-168 | 486 |
| Msa1346420 | MtrunA17_Chr5g0437021 | 48.479 | 493 | 247 | 4 | 12 | 499 | 7 | 497 | 4.08e-166 | 479 |
| Msa1346420 | MtrunA17_Chr5g0417611 | 48.343 | 513 | 256 | 6 | 1 | 508 | 1 | 509 | 8.53e-165 | 476 |
| Msa1346420 | MtrunA17_Chr1g0205691 | 47.985 | 521 | 252 | 10 | 1 | 509 | 1 | 514 | 1.42e-163 | 474 |
| Msa1346420 | MtrunA17_Chr1g0164871 | 47.942 | 486 | 249 | 3 | 16 | 499 | 14 | 497 | 2.68e-163 | 473 |
| Msa1346420 | MtrunA17_Chr1g0164851 | 48.148 | 486 | 248 | 3 | 16 | 499 | 14 | 497 | 3.89e-163 | 473 |
| Msa1346420 | MtrunA17_Chr3g0128081 | 48.633 | 512 | 253 | 6 | 1 | 507 | 1 | 507 | 2.49e-162 | 470 |
| Msa1346420 | MtrunA17_Chr8g0390261 | 47.561 | 492 | 249 | 7 | 20 | 508 | 21 | 506 | 6.53e-160 | 464 |
| Msa1346420 | MtrunA17_Chr4g0048411 | 50.403 | 496 | 239 | 6 | 16 | 506 | 14 | 507 | 8.15e-160 | 464 |
| Msa1346420 | MtrunA17_Chr3g0085971 | 46.881 | 497 | 257 | 5 | 14 | 505 | 10 | 504 | 1.40e-158 | 460 |
| Msa1346420 | MtrunA17_Chr1g0205681 | 44.444 | 504 | 270 | 7 | 1 | 499 | 1 | 499 | 3.78e-158 | 459 |
| Msa1346420 | MtrunA17_Chr1g0205671 | 45.040 | 504 | 266 | 8 | 1 | 499 | 1 | 498 | 1.31e-157 | 457 |
| Msa1346420 | MtrunA17_Chr6g0486681 | 45.365 | 507 | 269 | 7 | 1 | 503 | 1 | 503 | 1.03e-156 | 456 |
| Msa1346420 | MtrunA17_Chr6g0486671 | 45.365 | 507 | 269 | 7 | 1 | 503 | 1 | 503 | 1.03e-156 | 456 |
| Msa1346420 | MtrunA17_Chr8g0390141 | 46.356 | 494 | 257 | 8 | 20 | 509 | 21 | 510 | 7.44e-156 | 454 |
| Msa1346420 | MtrunA17_Chr4g0048051 | 50.000 | 496 | 241 | 6 | 16 | 507 | 14 | 506 | 1.19e-148 | 435 |
| Msa1346420 | MtrunA17_Chr3g0128171 | 47.461 | 453 | 230 | 5 | 52 | 498 | 1 | 451 | 1.60e-143 | 420 |
| Msa1346420 | MtrunA17_Chr3g0078791 | 47.140 | 437 | 206 | 5 | 73 | 506 | 17 | 431 | 2.96e-137 | 403 |
| Msa1346420 | MtrunA17_Chr3g0115771 | 61.661 | 313 | 75 | 4 | 152 | 463 | 5 | 273 | 2.07e-121 | 357 |
| Msa1346420 | MtrunA17_Chr4g0065351 | 48.538 | 342 | 171 | 4 | 162 | 502 | 1 | 338 | 1.74e-110 | 332 |
| Msa1346420 | MtrunA17_Chr4g0036021 | 31.211 | 487 | 287 | 10 | 29 | 493 | 31 | 491 | 3.30e-61 | 209 |
| Msa1346420 | MtrunA17_Chr6g0485661 | 29.565 | 460 | 292 | 9 | 30 | 479 | 63 | 500 | 5.26e-61 | 208 |
| Msa1346420 | MtrunA17_Chr4g0034681 | 29.918 | 488 | 293 | 12 | 29 | 493 | 34 | 495 | 1.39e-60 | 207 |
| Msa1346420 | MtrunA17_Chr3g0144361 | 30.123 | 488 | 290 | 13 | 29 | 491 | 32 | 493 | 1.75e-57 | 199 |
| Msa1346420 | MtrunA17_Chr8g0373531 | 32.407 | 432 | 248 | 9 | 92 | 492 | 67 | 485 | 2.85e-57 | 198 |
| Msa1346420 | MtrunA17_Chr3g0115761 | 86.364 | 110 | 15 | 0 | 52 | 161 | 1 | 110 | 4.20e-57 | 186 |
| Msa1346420 | MtrunA17_Chr8g0390521 | 26.518 | 494 | 328 | 8 | 8 | 489 | 1 | 471 | 2.04e-54 | 190 |
| Msa1346420 | MtrunA17_Chr2g0282031 | 30.042 | 476 | 293 | 14 | 26 | 489 | 53 | 500 | 2.45e-54 | 191 |
| Msa1346420 | MtrunA17_Chr4g0021771 | 26.273 | 491 | 306 | 13 | 22 | 492 | 51 | 505 | 7.88e-51 | 181 |
| Msa1346420 | MtrunA17_Chr5g0432581 | 27.559 | 508 | 321 | 10 | 8 | 492 | 2 | 485 | 9.76e-51 | 181 |
| Msa1346420 | MtrunA17_Chr4g0039651 | 27.824 | 478 | 302 | 12 | 26 | 486 | 46 | 497 | 2.02e-46 | 169 |
| Msa1346420 | MtrunA17_Chr6g0457781 | 27.862 | 463 | 293 | 9 | 31 | 486 | 111 | 539 | 1.39e-44 | 164 |
| Msa1346420 | MtrunA17_Chr4g0065341 | 48.667 | 150 | 77 | 0 | 4 | 153 | 6 | 155 | 3.69e-44 | 153 |
| Msa1346420 | MtrunA17_Chr8g0373181 | 27.047 | 403 | 287 | 2 | 84 | 486 | 87 | 482 | 4.36e-43 | 159 |
| Msa1346420 | MtrunA17_Chr7g0250881 | 27.332 | 461 | 298 | 10 | 31 | 486 | 71 | 499 | 5.57e-43 | 159 |
| Msa1346420 | MtrunA17_Chr1g0213611 | 25.979 | 485 | 309 | 12 | 27 | 492 | 78 | 531 | 1.43e-40 | 153 |
| Msa1346420 | MtrunA17_Chr7g0214451 | 27.368 | 475 | 301 | 14 | 31 | 492 | 39 | 482 | 2.22e-40 | 152 |
| Msa1346420 | MtrunA17_Chr8g0373191 | 27.747 | 364 | 244 | 5 | 129 | 486 | 104 | 454 | 6.04e-40 | 150 |
| Msa1346420 | MtrunA17_Chr1g0213631 | 27.342 | 395 | 266 | 9 | 108 | 492 | 52 | 435 | 5.19e-39 | 147 |
| Msa1346420 | MtrunA17_Chr5g0403831 | 26.603 | 421 | 278 | 9 | 97 | 492 | 84 | 498 | 2.63e-38 | 146 |
| Msa1346420 | MtrunA17_Chr4g0032021 | 27.066 | 484 | 305 | 12 | 24 | 486 | 95 | 551 | 2.79e-37 | 144 |
| Msa1346420 | MtrunA17_Chr7g0259471 | 26.340 | 429 | 288 | 10 | 62 | 486 | 66 | 470 | 3.79e-37 | 142 |
| Msa1346420 | MtrunA17_Chr1g0155221 | 24.390 | 410 | 290 | 4 | 84 | 486 | 89 | 485 | 5.18e-35 | 137 |
| Msa1346420 | MtrunA17_Chr3g0119401 | 28.294 | 463 | 295 | 13 | 30 | 486 | 98 | 529 | 2.53e-34 | 135 |
| Msa1346420 | MtrunA17_Chr2g0303731 | 30.588 | 340 | 209 | 8 | 36 | 366 | 37 | 358 | 5.49e-34 | 135 |
| Msa1346420 | MtrunA17_Chr2g0303701 | 31.361 | 338 | 208 | 8 | 36 | 367 | 37 | 356 | 9.32e-34 | 134 |
| Msa1346420 | MtrunA17_Chr2g0286721 | 25.592 | 422 | 265 | 9 | 84 | 486 | 89 | 480 | 2.03e-33 | 132 |
| Msa1346420 | MtrunA17_Chr7g0259221 | 26.781 | 407 | 278 | 8 | 84 | 486 | 82 | 472 | 2.21e-33 | 132 |
| Msa1346420 | MtrunA17_Chr7g0273281 | 23.399 | 406 | 295 | 5 | 84 | 487 | 102 | 493 | 3.15e-33 | 132 |
| Msa1346420 | MtrunA17_Chr5g0446681 | 40.625 | 192 | 76 | 3 | 1 | 192 | 1 | 154 | 5.57e-33 | 127 |
| Msa1346420 | MtrunA17_Chr5g0446681 | 47.368 | 133 | 69 | 1 | 375 | 506 | 154 | 286 | 6.48e-29 | 115 |
| Msa1346420 | MtrunA17_Chr8g0376631 | 31.077 | 325 | 199 | 8 | 36 | 353 | 37 | 343 | 3.79e-32 | 130 |
| Msa1346420 | MtrunA17_Chr8g0376601 | 30.994 | 342 | 205 | 9 | 36 | 366 | 37 | 358 | 7.08e-32 | 129 |
| Msa1346420 | MtrunA17_Chr2g0290181 | 28.678 | 401 | 252 | 10 | 1 | 388 | 1 | 380 | 1.18e-31 | 128 |
| Msa1346420 | MtrunA17_Chr4g0066581 | 23.844 | 411 | 286 | 8 | 84 | 486 | 92 | 483 | 1.23e-31 | 127 |
| Msa1346420 | MtrunA17_Chr4g0004821 | 25.380 | 461 | 310 | 10 | 30 | 487 | 41 | 470 | 4.21e-31 | 125 |
| Msa1346420 | MtrunA17_Chr8g0376611 | 35.200 | 250 | 155 | 4 | 108 | 351 | 26 | 274 | 1.10e-30 | 124 |
| Msa1346420 | MtrunA17_Chr7g0228781 | 39.153 | 189 | 76 | 4 | 2 | 153 | 17 | 203 | 5.39e-29 | 114 |
| Msa1346420 | MtrunA17_Chr6g0486021 | 24.084 | 382 | 273 | 6 | 109 | 487 | 117 | 484 | 7.37e-26 | 110 |
| Msa1346420 | MtrunA17_Chr2g0290161 | 29.520 | 271 | 153 | 8 | 108 | 367 | 27 | 270 | 2.57e-22 | 100 |
| Msa1346420 | MtrunA17_Chr3g0121674 | 26.014 | 296 | 204 | 8 | 204 | 492 | 2 | 289 | 2.57e-20 | 91.7 |
| Msa1346420 | MtrunA17_Chr3g0146061 | 28.372 | 215 | 134 | 5 | 105 | 313 | 67 | 267 | 2.96e-18 | 88.2 |
| Msa1346420 | MtrunA17_Chr3g0146061 | 26.415 | 212 | 134 | 5 | 285 | 483 | 519 | 721 | 4.98e-12 | 68.6 |
| Msa1346420 | MtrunA17_Chr8g0370141 | 30.168 | 179 | 122 | 3 | 79 | 255 | 41 | 218 | 1.22e-17 | 84.7 |
| Msa1346420 | MtrunA17_Chr5g0434231 | 33.333 | 171 | 88 | 4 | 89 | 258 | 9 | 154 | 5.49e-17 | 78.2 |
| Msa1346420 | MtrunA17_Chr5g0407441 | 25.862 | 290 | 183 | 9 | 23 | 309 | 2 | 262 | 6.49e-17 | 84.0 |
| Msa1346420 | MtrunA17_Chr3g0144261 | 31.361 | 169 | 111 | 5 | 108 | 273 | 68 | 234 | 1.05e-15 | 80.1 |
| Msa1346420 | MtrunA17_Chr3g0144261 | 25.188 | 266 | 161 | 9 | 244 | 483 | 458 | 711 | 4.33e-13 | 72.0 |
| Msa1346420 | MtrunA17_Chr5g0419321 | 27.746 | 173 | 122 | 3 | 85 | 255 | 75 | 246 | 4.67e-15 | 78.2 |
| Msa1346420 | MtrunA17_Chr5g0404191 | 26.667 | 180 | 127 | 1 | 84 | 263 | 90 | 264 | 1.65e-14 | 74.3 |
| Msa1346420 | MtrunA17_Chr7g0273261 | 24.895 | 237 | 162 | 5 | 254 | 486 | 10 | 234 | 2.12e-14 | 73.2 |
| Msa1346420 | MtrunA17_Chr8g0370151 | 25.941 | 239 | 153 | 6 | 260 | 483 | 113 | 342 | 1.79e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346420 | AT1G34580.1 | 58.250 | 503 | 206 | 3 | 1 | 500 | 1 | 502 | 0.0 | 615 |
| Msa1346420 | AT1G34580.2 | 57.743 | 452 | 188 | 2 | 52 | 500 | 1 | 452 | 0.0 | 551 |
| Msa1346420 | AT5G26340.1 | 49.016 | 508 | 249 | 7 | 1 | 503 | 1 | 503 | 4.68e-179 | 513 |
| Msa1346420 | AT1G11260.1 | 51.953 | 512 | 235 | 8 | 1 | 507 | 1 | 506 | 4.87e-177 | 508 |
| Msa1346420 | AT4G02050.2 | 49.600 | 500 | 245 | 5 | 1 | 497 | 1 | 496 | 1.39e-175 | 504 |
| Msa1346420 | AT4G02050.1 | 49.600 | 500 | 245 | 5 | 1 | 497 | 1 | 496 | 1.39e-175 | 504 |
| Msa1346420 | AT3G19940.1 | 49.505 | 505 | 250 | 5 | 1 | 503 | 1 | 502 | 3.02e-172 | 496 |
| Msa1346420 | AT3G19930.1 | 50.000 | 504 | 246 | 4 | 1 | 502 | 1 | 500 | 7.37e-172 | 494 |
| Msa1346420 | AT3G19930.2 | 50.000 | 504 | 246 | 4 | 1 | 502 | 1 | 500 | 7.37e-172 | 494 |
| Msa1346420 | AT1G50310.1 | 47.525 | 505 | 260 | 5 | 1 | 502 | 1 | 503 | 1.20e-167 | 484 |
| Msa1346420 | AT4G21480.1 | 49.898 | 489 | 241 | 4 | 16 | 502 | 14 | 500 | 2.33e-165 | 478 |
| Msa1346420 | AT5G23270.1 | 48.207 | 502 | 253 | 5 | 1 | 498 | 1 | 499 | 2.68e-165 | 478 |
| Msa1346420 | AT5G61520.1 | 45.639 | 493 | 257 | 6 | 18 | 503 | 17 | 505 | 5.49e-159 | 462 |
| Msa1346420 | AT1G77210.2 | 43.590 | 507 | 278 | 7 | 1 | 503 | 1 | 503 | 1.29e-153 | 448 |
| Msa1346420 | AT1G77210.1 | 43.590 | 507 | 278 | 7 | 1 | 503 | 1 | 503 | 1.29e-153 | 448 |
| Msa1346420 | AT5G26250.1 | 44.422 | 493 | 268 | 5 | 13 | 503 | 10 | 498 | 9.53e-149 | 436 |
| Msa1346420 | AT3G05960.1 | 44.400 | 500 | 272 | 5 | 10 | 507 | 6 | 501 | 1.13e-148 | 435 |
| Msa1346420 | AT5G61520.2 | 44.783 | 460 | 243 | 6 | 51 | 503 | 2 | 457 | 2.98e-143 | 420 |
| Msa1346420 | AT1G07340.1 | 43.173 | 498 | 274 | 7 | 7 | 500 | 5 | 497 | 1.75e-132 | 394 |
| Msa1346420 | AT1G50310.2 | 46.875 | 352 | 183 | 4 | 153 | 502 | 11 | 360 | 1.80e-114 | 343 |
| Msa1346420 | AT1G77210.3 | 41.076 | 353 | 202 | 5 | 153 | 503 | 6 | 354 | 2.42e-100 | 306 |
| Msa1346420 | AT2G16120.1 | 31.828 | 487 | 285 | 13 | 29 | 492 | 30 | 492 | 1.81e-60 | 207 |
| Msa1346420 | AT2G16130.1 | 31.034 | 493 | 281 | 13 | 29 | 492 | 30 | 492 | 5.79e-60 | 206 |
| Msa1346420 | AT3G18830.1 | 29.876 | 482 | 288 | 12 | 29 | 486 | 40 | 495 | 1.71e-58 | 202 |
| Msa1346420 | AT2G18480.1 | 30.998 | 471 | 276 | 12 | 39 | 486 | 36 | 480 | 5.84e-57 | 198 |
| Msa1346420 | AT4G36670.1 | 29.821 | 503 | 294 | 13 | 29 | 504 | 21 | 491 | 2.00e-56 | 196 |
| Msa1346420 | AT2G20780.1 | 27.083 | 480 | 308 | 15 | 22 | 489 | 51 | 500 | 6.35e-47 | 171 |
| Msa1346420 | AT2G20780.2 | 27.431 | 401 | 273 | 10 | 98 | 489 | 51 | 442 | 1.70e-45 | 166 |
| Msa1346420 | AT3G05160.1 | 27.389 | 471 | 303 | 6 | 20 | 486 | 16 | 451 | 4.07e-44 | 162 |
| Msa1346420 | AT3G05160.3 | 28.889 | 405 | 268 | 4 | 86 | 486 | 14 | 402 | 7.62e-44 | 160 |
| Msa1346420 | AT3G05160.2 | 28.889 | 405 | 268 | 4 | 86 | 486 | 14 | 402 | 7.62e-44 | 160 |
| Msa1346420 | AT5G16150.2 | 27.586 | 464 | 295 | 9 | 31 | 487 | 111 | 540 | 3.73e-43 | 161 |
| Msa1346420 | AT5G16150.1 | 27.586 | 464 | 295 | 9 | 31 | 487 | 111 | 540 | 3.73e-43 | 161 |
| Msa1346420 | AT5G16150.3 | 27.586 | 464 | 295 | 9 | 31 | 487 | 111 | 540 | 3.73e-43 | 161 |
| Msa1346420 | AT1G75220.1 | 26.980 | 404 | 286 | 3 | 84 | 486 | 88 | 483 | 4.12e-42 | 157 |
| Msa1346420 | AT5G27350.1 | 25.957 | 470 | 313 | 7 | 20 | 487 | 26 | 462 | 1.81e-41 | 155 |
| Msa1346420 | AT3G05165.3 | 26.013 | 469 | 312 | 7 | 20 | 486 | 25 | 460 | 4.18e-41 | 154 |
| Msa1346420 | AT3G05165.2 | 26.013 | 469 | 312 | 7 | 20 | 486 | 25 | 460 | 4.18e-41 | 154 |
| Msa1346420 | AT3G05165.1 | 26.013 | 469 | 312 | 7 | 20 | 486 | 25 | 460 | 4.18e-41 | 154 |
| Msa1346420 | AT5G17010.1 | 28.041 | 485 | 292 | 12 | 26 | 486 | 48 | 499 | 7.65e-41 | 154 |
| Msa1346420 | AT5G17010.3 | 28.041 | 485 | 292 | 12 | 26 | 486 | 48 | 499 | 7.65e-41 | 154 |
| Msa1346420 | AT5G17010.4 | 28.041 | 485 | 292 | 12 | 26 | 486 | 48 | 499 | 7.65e-41 | 154 |
| Msa1346420 | AT1G08900.5 | 26.585 | 410 | 275 | 6 | 84 | 486 | 23 | 413 | 1.60e-39 | 149 |
| Msa1346420 | AT1G08900.3 | 26.585 | 410 | 275 | 6 | 84 | 486 | 57 | 447 | 3.87e-39 | 148 |
| Msa1346420 | AT1G08900.1 | 26.585 | 410 | 275 | 6 | 84 | 486 | 65 | 455 | 4.73e-39 | 148 |
| Msa1346420 | AT1G08900.2 | 26.585 | 410 | 275 | 6 | 84 | 486 | 65 | 455 | 4.73e-39 | 148 |
| Msa1346420 | AT3G05400.1 | 26.238 | 404 | 286 | 5 | 84 | 487 | 66 | 457 | 7.49e-39 | 147 |
| Msa1346420 | AT1G19450.1 | 26.551 | 403 | 289 | 2 | 84 | 486 | 89 | 484 | 8.81e-39 | 148 |
| Msa1346420 | AT2G48020.2 | 26.781 | 407 | 282 | 6 | 84 | 488 | 68 | 460 | 9.86e-39 | 147 |
| Msa1346420 | AT2G48020.1 | 26.781 | 407 | 282 | 6 | 84 | 488 | 68 | 460 | 9.86e-39 | 147 |
| Msa1346420 | AT5G59250.1 | 26.860 | 484 | 306 | 12 | 24 | 486 | 97 | 553 | 2.91e-38 | 147 |
| Msa1346420 | AT2G43330.1 | 25.397 | 504 | 335 | 13 | 2 | 494 | 11 | 484 | 1.68e-37 | 144 |
| Msa1346420 | AT4G04750.1 | 27.778 | 396 | 262 | 8 | 98 | 486 | 90 | 468 | 3.11e-37 | 143 |
| Msa1346420 | AT4G04750.2 | 27.778 | 396 | 262 | 8 | 98 | 486 | 90 | 468 | 3.11e-37 | 143 |
| Msa1346420 | AT4G04750.3 | 27.226 | 393 | 268 | 6 | 98 | 486 | 134 | 512 | 4.62e-37 | 144 |
| Msa1346420 | AT3G03090.1 | 28.025 | 471 | 296 | 14 | 33 | 486 | 55 | 499 | 1.49e-36 | 142 |
| Msa1346420 | AT1G08930.1 | 24.520 | 469 | 319 | 7 | 20 | 486 | 53 | 488 | 2.33e-36 | 141 |
| Msa1346420 | AT1G08930.2 | 24.520 | 469 | 319 | 7 | 20 | 486 | 53 | 488 | 2.33e-36 | 141 |
| Msa1346420 | AT3G05165.4 | 25.175 | 429 | 282 | 6 | 20 | 444 | 25 | 418 | 8.81e-36 | 139 |
| Msa1346420 | AT3G05165.5 | 25.175 | 429 | 282 | 6 | 20 | 444 | 25 | 418 | 8.81e-36 | 139 |
| Msa1346420 | AT3G05165.6 | 25.314 | 478 | 303 | 10 | 20 | 491 | 25 | 454 | 1.18e-35 | 139 |
| Msa1346420 | AT3G05155.1 | 24.766 | 428 | 300 | 9 | 64 | 486 | 45 | 455 | 1.39e-35 | 138 |
| Msa1346420 | AT3G05400.2 | 25.990 | 404 | 267 | 6 | 84 | 487 | 66 | 437 | 2.64e-35 | 137 |
| Msa1346420 | AT1G30220.1 | 31.322 | 348 | 207 | 8 | 36 | 376 | 39 | 361 | 3.80e-35 | 139 |
| Msa1346420 | AT5G27360.1 | 24.010 | 404 | 289 | 5 | 86 | 486 | 77 | 465 | 6.31e-35 | 137 |
| Msa1346420 | AT1G54730.2 | 24.672 | 458 | 310 | 7 | 31 | 486 | 38 | 462 | 1.74e-34 | 135 |
| Msa1346420 | AT5G27360.3 | 24.010 | 404 | 289 | 5 | 86 | 486 | 125 | 513 | 1.83e-34 | 136 |
| Msa1346420 | AT1G05030.1 | 28.294 | 463 | 294 | 12 | 31 | 487 | 85 | 515 | 4.67e-34 | 135 |
| Msa1346420 | AT1G08890.1 | 24.519 | 416 | 286 | 5 | 84 | 491 | 67 | 462 | 4.86e-34 | 134 |
| Msa1346420 | AT1G05030.2 | 28.744 | 414 | 275 | 9 | 80 | 487 | 64 | 463 | 2.60e-33 | 132 |
| Msa1346420 | AT1G08900.4 | 26.075 | 372 | 249 | 6 | 84 | 448 | 65 | 417 | 5.24e-33 | 130 |
| Msa1346420 | AT4G04760.3 | 25.490 | 408 | 285 | 6 | 84 | 486 | 12 | 405 | 6.21e-33 | 130 |
| Msa1346420 | AT4G04760.1 | 25.490 | 408 | 285 | 6 | 84 | 486 | 71 | 464 | 1.21e-32 | 130 |
| Msa1346420 | AT5G27360.2 | 24.513 | 359 | 253 | 5 | 131 | 486 | 18 | 361 | 1.60e-32 | 128 |
| Msa1346420 | AT5G27360.5 | 24.513 | 359 | 253 | 5 | 131 | 486 | 18 | 361 | 1.60e-32 | 128 |
| Msa1346420 | AT1G79820.2 | 25.910 | 467 | 300 | 15 | 30 | 487 | 59 | 488 | 6.91e-32 | 128 |
| Msa1346420 | AT1G79820.1 | 25.910 | 467 | 300 | 15 | 30 | 487 | 59 | 488 | 6.91e-32 | 128 |
| Msa1346420 | AT4G04760.2 | 25.123 | 406 | 286 | 6 | 84 | 486 | 71 | 461 | 3.57e-31 | 126 |
| Msa1346420 | AT3G05150.1 | 27.518 | 407 | 276 | 9 | 84 | 486 | 75 | 466 | 4.04e-31 | 126 |
| Msa1346420 | AT3G05150.3 | 27.518 | 407 | 276 | 9 | 84 | 486 | 75 | 466 | 4.04e-31 | 126 |
| Msa1346420 | AT3G05150.2 | 27.007 | 411 | 273 | 9 | 84 | 486 | 75 | 466 | 4.18e-31 | 126 |
| Msa1346420 | AT5G18840.1 | 25.000 | 420 | 270 | 9 | 84 | 486 | 84 | 475 | 5.31e-31 | 125 |
| Msa1346420 | AT1G54730.5 | 23.904 | 456 | 295 | 7 | 31 | 486 | 38 | 441 | 9.30e-31 | 124 |
| Msa1346420 | AT4G16480.2 | 28.367 | 349 | 222 | 8 | 36 | 374 | 38 | 368 | 4.44e-30 | 124 |
| Msa1346420 | AT4G16480.3 | 28.367 | 349 | 222 | 8 | 36 | 374 | 38 | 368 | 4.44e-30 | 124 |
| Msa1346420 | AT4G16480.1 | 28.367 | 349 | 222 | 8 | 36 | 374 | 38 | 368 | 4.44e-30 | 124 |
| Msa1346420 | AT1G54730.3 | 24.519 | 416 | 279 | 7 | 31 | 444 | 38 | 420 | 5.24e-30 | 122 |
| Msa1346420 | AT1G67300.2 | 25.514 | 486 | 324 | 11 | 7 | 487 | 36 | 488 | 2.06e-29 | 121 |
| Msa1346420 | AT1G67300.1 | 25.709 | 494 | 312 | 13 | 7 | 487 | 36 | 487 | 5.90e-29 | 120 |
| Msa1346420 | AT1G67300.3 | 25.709 | 494 | 312 | 13 | 7 | 487 | 36 | 487 | 5.90e-29 | 120 |
| Msa1346420 | AT1G67300.6 | 25.740 | 439 | 276 | 11 | 7 | 435 | 36 | 434 | 5.91e-28 | 116 |
| Msa1346420 | AT1G67300.7 | 25.740 | 439 | 276 | 11 | 7 | 435 | 36 | 434 | 5.91e-28 | 116 |
| Msa1346420 | AT1G79820.4 | 25.243 | 412 | 267 | 13 | 30 | 435 | 59 | 435 | 3.04e-27 | 114 |
| Msa1346420 | AT1G54730.4 | 23.671 | 414 | 264 | 7 | 31 | 444 | 38 | 399 | 2.40e-26 | 111 |
| Msa1346420 | AT3G20460.1 | 23.291 | 395 | 291 | 5 | 92 | 486 | 101 | 483 | 8.47e-26 | 110 |
| Msa1346420 | AT1G67300.4 | 25.995 | 427 | 266 | 11 | 7 | 423 | 36 | 422 | 9.09e-26 | 110 |
| Msa1346420 | AT1G67300.5 | 25.995 | 427 | 266 | 11 | 7 | 423 | 36 | 422 | 9.09e-26 | 110 |
| Msa1346420 | AT1G08920.1 | 21.975 | 405 | 300 | 5 | 84 | 486 | 72 | 462 | 6.38e-24 | 105 |
| Msa1346420 | AT1G08920.2 | 21.182 | 406 | 309 | 4 | 84 | 486 | 72 | 469 | 1.10e-23 | 104 |
| Msa1346420 | AT2G35740.1 | 25.439 | 342 | 225 | 8 | 36 | 365 | 37 | 360 | 1.16e-23 | 105 |
| Msa1346420 | AT1G54730.9 | 23.797 | 395 | 266 | 7 | 31 | 423 | 38 | 399 | 2.57e-23 | 102 |
| Msa1346420 | AT1G54730.7 | 23.797 | 395 | 266 | 7 | 31 | 423 | 38 | 399 | 2.57e-23 | 102 |
| Msa1346420 | AT2G48020.4 | 25.338 | 296 | 211 | 4 | 84 | 377 | 68 | 355 | 3.09e-23 | 102 |
| Msa1346420 | AT5G27360.4 | 24.138 | 290 | 204 | 4 | 86 | 370 | 77 | 355 | 4.27e-23 | 102 |
| Msa1346420 | AT5G17010.2 | 24.370 | 476 | 247 | 13 | 33 | 486 | 52 | 436 | 1.98e-22 | 100 |
| Msa1346420 | AT3G05155.2 | 23.630 | 292 | 210 | 4 | 64 | 353 | 45 | 325 | 2.15e-22 | 98.6 |
| Msa1346420 | AT1G54730.11 | 24.768 | 323 | 216 | 5 | 31 | 353 | 38 | 333 | 3.87e-22 | 97.8 |
| Msa1346420 | AT2G48020.3 | 25.185 | 270 | 194 | 3 | 84 | 353 | 68 | 329 | 5.85e-22 | 97.8 |
| Msa1346420 | AT1G54730.10 | 24.667 | 300 | 202 | 4 | 31 | 330 | 38 | 313 | 2.09e-21 | 95.5 |
| Msa1346420 | AT1G54730.6 | 24.667 | 300 | 202 | 4 | 31 | 330 | 38 | 313 | 2.09e-21 | 95.5 |
| Msa1346420 | AT3G51490.1 | 29.528 | 254 | 155 | 9 | 24 | 273 | 3 | 236 | 1.33e-20 | 95.9 |
| Msa1346420 | AT3G51490.2 | 29.528 | 254 | 155 | 9 | 24 | 273 | 3 | 236 | 1.38e-20 | 95.9 |
| Msa1346420 | AT3G51490.2 | 25.847 | 236 | 156 | 6 | 260 | 483 | 486 | 714 | 4.20e-12 | 69.3 |
| Msa1346420 | AT1G54730.8 | 24.333 | 300 | 203 | 4 | 31 | 330 | 38 | 313 | 1.40e-20 | 94.4 |
| Msa1346420 | AT1G79820.3 | 23.226 | 465 | 267 | 14 | 30 | 487 | 59 | 440 | 2.85e-20 | 94.0 |
| Msa1346420 | AT1G08920.3 | 21.951 | 369 | 260 | 6 | 84 | 438 | 72 | 426 | 4.65e-20 | 93.2 |
| Msa1346420 | AT3G51490.3 | 31.548 | 168 | 110 | 5 | 109 | 273 | 21 | 186 | 2.00e-19 | 92.4 |
| Msa1346420 | AT3G51490.3 | 25.847 | 236 | 156 | 6 | 260 | 483 | 436 | 664 | 3.53e-12 | 69.3 |
| Msa1346420 | AT4G35300.9 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 4.98e-17 | 84.7 |
| Msa1346420 | AT4G35300.9 | 27.442 | 215 | 128 | 6 | 285 | 483 | 508 | 710 | 6.45e-12 | 68.6 |
| Msa1346420 | AT4G35300.2 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 4.98e-17 | 84.7 |
| Msa1346420 | AT4G35300.2 | 27.442 | 215 | 128 | 6 | 285 | 483 | 508 | 710 | 6.45e-12 | 68.6 |
| Msa1346420 | AT4G35300.3 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 4.98e-17 | 84.7 |
| Msa1346420 | AT4G35300.3 | 27.442 | 215 | 128 | 6 | 285 | 483 | 508 | 710 | 6.45e-12 | 68.6 |
| Msa1346420 | AT4G35300.4 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.4 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT4G35300.8 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.8 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT4G35300.6 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.6 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT4G35300.11 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.11 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT4G35300.1 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.1 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT4G35300.10 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.10 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT4G35300.7 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.16e-17 | 84.7 |
| Msa1346420 | AT4G35300.7 | 27.442 | 215 | 128 | 6 | 285 | 483 | 518 | 720 | 6.16e-12 | 68.6 |
| Msa1346420 | AT1G79820.5 | 23.370 | 368 | 209 | 10 | 127 | 487 | 77 | 378 | 5.20e-17 | 83.2 |
| Msa1346420 | AT1G20840.2 | 29.717 | 212 | 137 | 6 | 77 | 278 | 30 | 239 | 2.34e-16 | 82.8 |
| Msa1346420 | AT1G20840.1 | 29.717 | 212 | 137 | 6 | 77 | 278 | 30 | 239 | 2.34e-16 | 82.8 |
| Msa1346420 | AT4G35300.5 | 27.442 | 215 | 128 | 6 | 285 | 483 | 321 | 523 | 5.84e-12 | 68.6 |
Find 111 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGATTCTTGTTCGTTAC+TGG | 0.128057 | tig0008925:+13118 | Msa1346420:CDS |
| CCCTGTAACTTGTTGGAAAA+AGG | 0.149049 | tig0008925:-12951 | Msa1346420:intergenic |
| CTCAAAGCGCCTCGCCATTT+TGG | 0.167493 | tig0008925:-12569 | Msa1346420:intergenic |
| TAATTAAGAACCTCTATATT+TGG | 0.172485 | tig0008925:+10547 | Msa1346420:five_prime_UTR |
| CCTAACCTCTTTAGATCTTT+AGG | 0.188314 | tig0008925:+12998 | Msa1346420:CDS |
| CAAGTTACTGCTACCAATTT+TGG | 0.197138 | tig0008925:+10603 | Msa1346420:CDS |
| CCTTTAAAACCATATTAAAA+AGG | 0.205010 | tig0008925:+12891 | Msa1346420:CDS |
| GAACCTCTATATTTGGAAAA+TGG | 0.211269 | tig0008925:+10554 | Msa1346420:exon |
| TGTTTCTTTGCTGCGGGTTT+TGG | 0.214772 | tig0008925:+13993 | Msa1346420:CDS |
| GGATATGACATCGGAATTTC+AGG | 0.222818 | tig0008925:+10690 | Msa1346420:CDS |
| ATCTTGGGTCGTGTTCTTCT+TGG | 0.226529 | tig0008925:+11094 | Msa1346420:CDS |
| TCCAGTGCTTCTTATATTTA+CGG | 0.253516 | tig0008925:-14063 | Msa1346420:intergenic |
| TGTTAGTTTGCCACCAAAAT+TGG | 0.286869 | tig0008925:-10616 | Msa1346420:intergenic |
| CTCTTTAGATCTTTAGGTTT+GGG | 0.298390 | tig0008925:+13004 | Msa1346420:CDS |
| ATCAAAAGGCAATGCAATAT+TGG | 0.299239 | tig0008925:+13956 | Msa1346420:CDS |
| CGTTTATCCCTGTAACTTGT+TGG | 0.300744 | tig0008925:-12958 | Msa1346420:intergenic |
| AAATATTCCTATGCTTATCT+TGG | 0.307587 | tig0008925:+11078 | Msa1346420:CDS |
| GGAGTTGGTATAATCTTTGC+AGG | 0.317632 | tig0008925:+12614 | Msa1346420:CDS |
| CCAGTGCTTCTTATATTTAC+GGG | 0.327384 | tig0008925:-14062 | Msa1346420:intergenic |
| TTACTTTCTGCCATTCTACT+TGG | 0.330088 | tig0008925:+13040 | Msa1346420:CDS |
| GGTGGTATTGTCTTCCTTGC+TGG | 0.336236 | tig0008925:+11031 | Msa1346420:CDS |
| TATGGGGTAAACATTGGTTT+TGG | 0.345672 | tig0008925:+14273 | Msa1346420:CDS |
| AGCAAAGCTACGACGATGTT+TGG | 0.348265 | tig0008925:+10986 | Msa1346420:CDS |
| CTTGGACTTGCAGTTGTGCC+TGG | 0.348351 | tig0008925:+12686 | Msa1346420:CDS |
| CGGAGAAACGTCATCATAAT+AGG | 0.348722 | tig0008925:+11010 | Msa1346420:CDS |
| CTGAAGTTGCTCCACCAAAA+TGG | 0.353581 | tig0008925:+12555 | Msa1346420:CDS |
| TCTAGTGTTATTGATCGATT+TGG | 0.353688 | tig0008925:+13094 | Msa1346420:CDS |
| CCTCTTTAGATCTTTAGGTT+TGG | 0.361445 | tig0008925:+13003 | Msa1346420:CDS |
| ATGTTATGCCACTTTAAGTT+CGG | 0.376560 | tig0008925:+14149 | Msa1346420:CDS |
| GGTCGTGTTCTTCTTGGGTT+AGG | 0.380730 | tig0008925:+11100 | Msa1346420:CDS |
| CTTGCTGGTGGTGCCATTAA+CGG | 0.381192 | tig0008925:+11046 | Msa1346420:CDS |
| TGTTATGCCACTTTAAGTTC+GGG | 0.386010 | tig0008925:+14150 | Msa1346420:CDS |
| TAGAAAGGCAGCTGGTACTA+AGG | 0.387687 | tig0008925:+10874 | Msa1346420:CDS |
| TTTGCAGGTTGCATAAACTA+TGG | 0.389689 | tig0008925:+12629 | Msa1346420:CDS |
| TGGAGTCAATGCACATCATA+TGG | 0.390532 | tig0008925:+14255 | Msa1346420:CDS |
| GCTGCCTTTCTAAGAATGTC+TGG | 0.398895 | tig0008925:-10863 | Msa1346420:intergenic |
| GGCTGGTGGAGGATTCTCTA+TGG | 0.398898 | tig0008925:+10575 | Msa1346420:CDS |
| TCTTGGGTCGTGTTCTTCTT+GGG | 0.403493 | tig0008925:+11095 | Msa1346420:CDS |
| GAAGATTCTTGTTCGTTACT+GGG | 0.405890 | tig0008925:+13119 | Msa1346420:CDS |
| GCAGTGGTAGCTGGTGTTCA+TGG | 0.409202 | tig0008925:+13921 | Msa1346420:CDS |
| CGGTTTGTTAAAGGAGAAGA+TGG | 0.426425 | tig0008925:+14299 | Msa1346420:CDS |
| ACATCTTCTCATTATCTAGC+TGG | 0.429977 | tig0008925:+10941 | Msa1346420:CDS |
| ATTGTGCTGGCAGTGGTAGC+TGG | 0.430655 | tig0008925:+13912 | Msa1346420:CDS |
| AATATTCCTATGCTTATCTT+GGG | 0.434718 | tig0008925:+11079 | Msa1346420:CDS |
| CTTCCCAGACATTCTTAGAA+AGG | 0.438106 | tig0008925:+10859 | Msa1346420:CDS |
| TTACTATGTTTCTTTGCTGC+GGG | 0.441530 | tig0008925:+13987 | Msa1346420:CDS |
| GGAGACTAAAGGAATTGCTT+TGG | 0.447213 | tig0008925:+14235 | Msa1346420:CDS |
| CCTAAAGATCTAAAGAGGTT+AGG | 0.450908 | tig0008925:-12998 | Msa1346420:intergenic |
| ACCACGTTCGACTAAGCTGT+TGG | 0.460799 | tig0008925:-12750 | Msa1346420:intergenic |
| TAACTCAGGTTGAATATCAA+TGG | 0.460980 | tig0008925:-12819 | Msa1346420:intergenic |
| TGTTGCTGTGCATTTCATAA+TGG | 0.463293 | tig0008925:+14097 | Msa1346420:CDS |
| CTCTATATTTGGAAAATGGC+TGG | 0.465982 | tig0008925:+10558 | Msa1346420:exon |
| GGAGTCAATGCACATCATAT+GGG | 0.483226 | tig0008925:+14256 | Msa1346420:CDS |
| TCTCCATCCCCATGTGTGCT+TGG | 0.484108 | tig0008925:-12657 | Msa1346420:intergenic |
| CCCGTAAATATAAGAAGCAC+TGG | 0.502898 | tig0008925:+14062 | Msa1346420:CDS |
| TTTAACAACTCCAAGTAGAA+TGG | 0.503093 | tig0008925:-13050 | Msa1346420:intergenic |
| AAAGCAATTCCTTTAGTCTC+CGG | 0.505065 | tig0008925:-14233 | Msa1346420:intergenic |
| TATTATCATGTCTATATGCT+TGG | 0.508798 | tig0008925:+13144 | Msa1346420:CDS |
| TTAATAAGTTCTTCTAACTC+AGG | 0.509188 | tig0008925:-12833 | Msa1346420:intergenic |
| GGTACAAATGACATATCAAA+AGG | 0.512295 | tig0008925:+13942 | Msa1346420:CDS |
| TGTTGGGCGTGTCAGTTATG+AGG | 0.512619 | tig0008925:-12733 | Msa1346420:intergenic |
| ACTAGATGCAGCAACTATGC+AGG | 0.514850 | tig0008925:-10655 | Msa1346420:intergenic |
| TTTACTATGTTTCTTTGCTG+CGG | 0.515334 | tig0008925:+13986 | Msa1346420:CDS |
| CCACGTTCGACTAAGCTGTT+GGG | 0.516815 | tig0008925:-12749 | Msa1346420:intergenic |
| TGGGGATGGAGACTATCTCT+TGG | 0.519663 | tig0008925:+12668 | Msa1346420:CDS |
| AAAATGCCCCGAACTTAAAG+TGG | 0.523444 | tig0008925:-14157 | Msa1346420:intergenic |
| TGCATAGTTGCTGCATCTAG+TGG | 0.524556 | tig0008925:+10657 | Msa1346420:CDS |
| CCAAACCTAAAGATCTAAAG+AGG | 0.525169 | tig0008925:-13003 | Msa1346420:intergenic |
| ATTTGGAAAATGGCTGGTGG+AGG | 0.530401 | tig0008925:+10564 | Msa1346420:exon |
| GTTCTTCTTGGGTTAGGCGT+CGG | 0.539812 | tig0008925:+11106 | Msa1346420:CDS |
| AAGATTCTTGTTCGTTACTG+GGG | 0.542844 | tig0008925:+13120 | Msa1346420:CDS |
| TGGATTTGTGTCGTCACTTG+TGG | 0.544283 | tig0008925:+10961 | Msa1346420:CDS |
| ATGGCACTGCCAAGCACACA+TGG | 0.546307 | tig0008925:+12648 | Msa1346420:CDS |
| TTGGTGGAGCAACTTCAGAT+AGG | 0.546521 | tig0008925:-12550 | Msa1346420:intergenic |
| CCTGGAGCTGTAATTACCAT+TGG | 0.547596 | tig0008925:+12704 | Msa1346420:CDS |
| AAGGGAATATAGACCTCAGT+TGG | 0.552633 | tig0008925:+12910 | Msa1346420:CDS |
| CTGCCAAGCACACATGGGGA+TGG | 0.554164 | tig0008925:+12654 | Msa1346420:CDS |
| GCTTGCGGTGTCCATTGTGC+TGG | 0.554774 | tig0008925:+13899 | Msa1346420:intron |
| CCAATGGTAATTACAGCTCC+AGG | 0.559410 | tig0008925:-12704 | Msa1346420:intergenic |
| GTTAAAGGAGAAGATGGAGA+AGG | 0.565819 | tig0008925:+14305 | Msa1346420:CDS |
| ACATCATATGGGGTAAACAT+TGG | 0.571808 | tig0008925:+14267 | Msa1346420:CDS |
| GACATTCTTAGAAAGGCAGC+TGG | 0.576083 | tig0008925:+10866 | Msa1346420:CDS |
| CTGCCTTTCTAAGAATGTCT+GGG | 0.579026 | tig0008925:-10862 | Msa1346420:intergenic |
| AGATTCTTGTTCGTTACTGG+GGG | 0.587355 | tig0008925:+13121 | Msa1346420:CDS |
| GGTATTGTCTTCCTTGCTGG+TGG | 0.587453 | tig0008925:+11034 | Msa1346420:CDS |
| GTTATGCCACTTTAAGTTCG+GGG | 0.589545 | tig0008925:+14151 | Msa1346420:CDS |
| CTGGAATTAGCCATGCTAGA+GGG | 0.590701 | tig0008925:-14028 | Msa1346420:intergenic |
| AAGCTACGACGATGTTTGGT+CGG | 0.592316 | tig0008925:+10990 | Msa1346420:CDS |
| ACACGACCCAAGATAAGCAT+AGG | 0.599269 | tig0008925:-11085 | Msa1346420:intergenic |
| AGTTATGAGGAAGGCACCAA+TGG | 0.602973 | tig0008925:-12720 | Msa1346420:intergenic |
| ATATAGACCTCAGTTGGTGA+TGG | 0.608654 | tig0008925:+12916 | Msa1346420:CDS |
| TATCATGGAGCCCTCTAGCA+TGG | 0.611303 | tig0008925:+14018 | Msa1346420:CDS |
| GGTGTCCATTGTGCTGGCAG+TGG | 0.616794 | tig0008925:+13905 | Msa1346420:CDS |
| TGGCACTGCCAAGCACACAT+GGG | 0.622519 | tig0008925:+12649 | Msa1346420:CDS |
| AAAGCATTACATAAAATCAG+AGG | 0.624019 | tig0008925:+12791 | Msa1346420:CDS |
| GGGCGTGTCAGTTATGAGGA+AGG | 0.625101 | tig0008925:-12729 | Msa1346420:intergenic |
| GCAAATGCCATCACCAACTG+AGG | 0.625744 | tig0008925:-12923 | Msa1346420:intergenic |
| CGTTAATGGCACCACCAGCA+AGG | 0.629715 | tig0008925:-11045 | Msa1346420:intergenic |
| TATATTTGGAAAATGGCTGG+TGG | 0.630651 | tig0008925:+10561 | Msa1346420:exon |
| CTCAGGTTGAATATCAATGG+AGG | 0.632300 | tig0008925:-12816 | Msa1346420:intergenic |
| AGCTACCACTGCCAGCACAA+TGG | 0.639024 | tig0008925:-13910 | Msa1346420:intergenic |
| GAGTCAATGCACATCATATG+GGG | 0.640900 | tig0008925:+14257 | Msa1346420:CDS |
| CAATAACACTAGAAGAGATG+AGG | 0.641663 | tig0008925:-13084 | Msa1346420:intergenic |
| GGCACTGCCAAGCACACATG+GGG | 0.646594 | tig0008925:+12650 | Msa1346420:CDS |
| GCTGGTGGTGCCATTAACGG+AGG | 0.647650 | tig0008925:+11049 | Msa1346420:CDS |
| GCAACTTCAGATAGGTACAA+TGG | 0.649314 | tig0008925:-12542 | Msa1346420:intergenic |
| CCCAACAGCTTAGTCGAACG+TGG | 0.653506 | tig0008925:+12749 | Msa1346420:CDS |
| AGAAACGTCATCATAATAGG+TGG | 0.664664 | tig0008925:+11013 | Msa1346420:CDS |
| GTTGCTCCACCAAAATGGCG+AGG | 0.676475 | tig0008925:+12560 | Msa1346420:CDS |
| TTTAAGAAATGGCTTCATGG+TGG | 0.679695 | tig0008925:-10831 | None:intergenic |
| GCTGGAATTAGCCATGCTAG+AGG | 0.694505 | tig0008925:-14029 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATTCTCAAAA+GGG | - | tig0008925:11220-11239 | Msa1346420:intergenic | 10.0% |
| !! | AAAAAAAAAAAATTCTCAAA+AGG | - | tig0008925:11221-11240 | Msa1346420:intergenic | 10.0% |
| !!! | TAATAAATAAGAGTATATAT+AGG | - | tig0008925:11294-11313 | Msa1346420:intergenic | 10.0% |
| !! | TTTAAAAAACAAGATTAAAT+AGG | - | tig0008925:11398-11417 | Msa1346420:intergenic | 10.0% |
| !!! | TTAAATCTAAACTTTAAAAT+AGG | + | tig0008925:11494-11513 | Msa1346420:intron | 10.0% |
| !!! | TAAATCTAAACTTTAAAATA+GGG | + | tig0008925:11495-11514 | Msa1346420:intron | 10.0% |
| !!! | TGATTTTTTGCTTATATTAT+GGG | - | tig0008925:11329-11348 | Msa1346420:intergenic | 15.0% |
| !!! | ATGATTTTTTGCTTATATTA+TGG | - | tig0008925:11330-11349 | Msa1346420:intergenic | 15.0% |
| !! | AAAAAATAAGATTAAATCTG+AGG | - | tig0008925:11433-11452 | Msa1346420:intergenic | 15.0% |
| !!! | TTTTATCCTTAAAATTTGAT+GGG | + | tig0008925:11459-11478 | Msa1346420:intron | 15.0% |
| !!! | TTTTTTTTGACAGATTAAAT+AGG | - | tig0008925:11657-11676 | Msa1346420:intergenic | 15.0% |
| !! | TAATCTGTCAAAAAAAAATA+AGG | + | tig0008925:11660-11679 | Msa1346420:intron | 15.0% |
| !!! | TTATAGTCAAATTTGTTTAA+GGG | - | tig0008925:11826-11845 | Msa1346420:intergenic | 15.0% |
| !! | AATATTGTTCATAGTTTATA+TGG | + | tig0008925:12024-12043 | Msa1346420:intron | 15.0% |
| !! | AAAAACCATAAAAAGATAAA+AGG | + | tig0008925:12316-12335 | Msa1346420:intron | 15.0% |
| !!! | AATTTCCTTTTATCTTTTTA+TGG | - | tig0008925:12324-12343 | Msa1346420:intergenic | 15.0% |
| !!! | TAATAAACTTTTTTTAAGGA+GGG | - | tig0008925:12409-12428 | Msa1346420:intergenic | 15.0% |
| !!! | ATAATAAACTTTTTTTAAGG+AGG | - | tig0008925:12410-12429 | Msa1346420:intergenic | 15.0% |
| !!! | GGAATAATAAACTTTTTTTA+AGG | - | tig0008925:12413-12432 | Msa1346420:intergenic | 15.0% |
| !! | AATATGTCATCAAAATTTAT+CGG | - | tig0008925:12503-12522 | Msa1346420:intergenic | 15.0% |
| !!! | CTTTTTAATATGGTTTTAAA+GGG | - | tig0008925:12893-12912 | Msa1346420:intergenic | 15.0% |
| !!! | CTTTAAAACCATATTAAAAA+GGG | + | tig0008925:12892-12911 | Msa1346420:CDS | 15.0% |
| !! | TAGAAAATATCAATTTCTAA+AGG | + | tig0008925:13277-13296 | Msa1346420:intron | 15.0% |
| !! | GAAAATTTATATCAATGAAA+GGG | - | tig0008925:13670-13689 | Msa1346420:intergenic | 15.0% |
| !! | TGAAAATTTATATCAATGAA+AGG | - | tig0008925:13671-13690 | Msa1346420:intergenic | 15.0% |
| !!! | CAATTATTCTTTTATTTTCA+TGG | + | tig0008925:13689-13708 | Msa1346420:intron | 15.0% |
| !!! | ATTTTTAATAATTGTGAAAG+TGG | + | tig0008925:13770-13789 | Msa1346420:intron | 15.0% |
| !! | TAATTAAGAACCTCTATATT+TGG | + | tig0008925:10547-10566 | Msa1346420:five_prime_UTR | 20.0% |
| !! | TGAAATTAATGTCAAATTTC+AGG | + | tig0008925:10800-10819 | Msa1346420:intron | 20.0% |
| !!! | CAATGGGTTTTAAATAAATT+TGG | + | tig0008925:11148-11167 | Msa1346420:intron | 20.0% |
| !!! | GTCTTTTTTGCTTATATTTT+GGG | - | tig0008925:11365-11384 | Msa1346420:intergenic | 20.0% |
| !!! | TGTCTTTTTTGCTTATATTT+TGG | - | tig0008925:11366-11385 | Msa1346420:intergenic | 20.0% |
| !!! | CTTTTATCCTTAAAATTTGA+TGG | + | tig0008925:11458-11477 | Msa1346420:intron | 20.0% |
| !!! | GTACTTATAACTTTAAAAAC+TGG | + | tig0008925:11517-11536 | Msa1346420:intron | 20.0% |
| !!! | TGACAGATTAAAAGTTTTTA+AGG | - | tig0008925:11589-11608 | Msa1346420:intergenic | 20.0% |
| !!! | CTTATAGTCAAATTTGTTTA+AGG | - | tig0008925:11827-11846 | Msa1346420:intergenic | 20.0% |
| !!! | CTATAAGAATGTTATTTTGT+TGG | + | tig0008925:11840-11859 | Msa1346420:intron | 20.0% |
| !! | GGAATAACGTAATAAAAAAA+CGG | + | tig0008925:12045-12064 | Msa1346420:intron | 20.0% |
| !! | GTAATAAAAAAACGGAAAAA+CGG | + | tig0008925:12053-12072 | Msa1346420:intron | 20.0% |
| !!! | AAACTCTAGTTTAAGTATAA+AGG | + | tig0008925:12093-12112 | Msa1346420:intron | 20.0% |
| !! | TATAATAGAATGTGATGTTT+AGG | + | tig0008925:12119-12138 | Msa1346420:intron | 20.0% |
| !! | TATTCGCAAATTTATTTATG+TGG | + | tig0008925:12238-12257 | Msa1346420:intron | 20.0% |
| !!! | AATAAACTTTTTTTAAGGAG+GGG | - | tig0008925:12408-12427 | Msa1346420:intergenic | 20.0% |
| !! | ATTATTATTAGGGTTATGAT+AGG | + | tig0008925:12446-12465 | Msa1346420:intron | 20.0% |
| !! | TTATTATTAGGGTTATGATA+GGG | + | tig0008925:12447-12466 | Msa1346420:intron | 20.0% |
| !!! | GATTTTATGTAATGCTTTTT+TGG | - | tig0008925:12789-12808 | Msa1346420:intergenic | 20.0% |
| !!! | CCTTTTTAATATGGTTTTAA+AGG | - | tig0008925:12894-12913 | Msa1346420:intergenic | 20.0% |
| !!! | CCTTTAAAACCATATTAAAA+AGG | + | tig0008925:12891-12910 | Msa1346420:CDS | 20.0% |
| !!! | TCTATATTCCCTTTTTAATA+TGG | - | tig0008925:12903-12922 | Msa1346420:intergenic | 20.0% |
| !! | TTTATTATAATCAAGACAAG+AGG | + | tig0008925:13797-13816 | Msa1346420:intron | 20.0% |
| !! | TTATTATAATCAAGACAAGA+GGG | + | tig0008925:13798-13817 | Msa1346420:intron | 20.0% |
| !!! | TTTCATTATATTTTTCTTGC+CGG | + | tig0008925:14214-14233 | Msa1346420:CDS | 20.0% |
| ! | AATTAATGTCAAATTTCAGG+AGG | + | tig0008925:10803-10822 | Msa1346420:intron | 25.0% |
| !!! | TTTTTTAAGAAATGGCTTCA+TGG | - | tig0008925:10837-10856 | Msa1346420:intergenic | 25.0% |
| !!! | GGGAAGAATTTTTTAAGAAA+TGG | - | tig0008925:10845-10864 | Msa1346420:intergenic | 25.0% |
| ! | AAATATTCCTATGCTTATCT+TGG | + | tig0008925:11078-11097 | Msa1346420:CDS | 25.0% |
| ! | AATATTCCTATGCTTATCTT+GGG | + | tig0008925:11079-11098 | Msa1346420:CDS | 25.0% |
| ! | ACGATTTCCTAAATTTAGAA+CGG | - | tig0008925:11182-11201 | Msa1346420:intergenic | 25.0% |
| ! | TTCTAAATTTAGGAAATCGT+TGG | + | tig0008925:11182-11201 | Msa1346420:intron | 25.0% |
| !! | TTTTTGCTTATATTATGGGA+CGG | - | tig0008925:11325-11344 | Msa1346420:intergenic | 25.0% |
| !! | TTTTGACCCATCAAATTTTA+AGG | - | tig0008925:11468-11487 | Msa1346420:intergenic | 25.0% |
| ! | TACTTAAACTAGAGTTTAGA+CGG | - | tig0008925:12090-12109 | Msa1346420:intergenic | 25.0% |
| ! | TAGAGTAAAAAGTAGTTGTT+GGG | - | tig0008925:12220-12239 | Msa1346420:intergenic | 25.0% |
| ! | ATAGAGTAAAAAGTAGTTGT+TGG | - | tig0008925:12221-12240 | Msa1346420:intergenic | 25.0% |
| !!! | TTTTGATGACATATTGCAAT+TGG | + | tig0008925:12508-12527 | Msa1346420:intron | 25.0% |
| !! | AAAGCATTACATAAAATCAG+AGG | + | tig0008925:12791-12810 | Msa1346420:CDS | 25.0% |
| ! | TTAATAAGTTCTTCTAACTC+AGG | - | tig0008925:12836-12855 | Msa1346420:intergenic | 25.0% |
| ! | TATTATCATGTCTATATGCT+TGG | + | tig0008925:13144-13163 | Msa1346420:CDS | 25.0% |
| !!! | AAATGTATTTAGGGCAATTT+TGG | - | tig0008925:13217-13236 | Msa1346420:intergenic | 25.0% |
| ! | CTCCTTAACAAATGTATTTA+GGG | - | tig0008925:13226-13245 | Msa1346420:intergenic | 25.0% |
| ! | ACTCCTTAACAAATGTATTT+AGG | - | tig0008925:13227-13246 | Msa1346420:intergenic | 25.0% |
| ! | TCCTTTATAAATACTCTATC+TGG | + | tig0008925:13572-13591 | Msa1346420:intron | 25.0% |
| !! | TCCAGATAGAGTATTTATAA+AGG | - | tig0008925:13576-13595 | Msa1346420:intergenic | 25.0% |
| GAACCTCTATATTTGGAAAA+TGG | + | tig0008925:10554-10573 | Msa1346420:exon | 30.0% | |
| ! | CTTCTTTTTGGATATGACAT+CGG | + | tig0008925:10681-10700 | Msa1346420:CDS | 30.0% |
| !!! | ATTTTTAGAACCTCCGTTAA+TGG | - | tig0008925:11062-11081 | Msa1346420:intergenic | 30.0% |
| TCACTAATCAAGTAAGTCAA+TGG | + | tig0008925:11131-11150 | Msa1346420:intron | 30.0% | |
| CACTAATCAAGTAAGTCAAT+GGG | + | tig0008925:11132-11151 | Msa1346420:intron | 30.0% | |
| ! | TTCCTAAATTTAGAACGGAT+GGG | - | tig0008925:11177-11196 | Msa1346420:intergenic | 30.0% |
| ! | TTTCCTAAATTTAGAACGGA+TGG | - | tig0008925:11178-11197 | Msa1346420:intergenic | 30.0% |
| ! | GAGAGAGAATACATAGTTTT+TGG | + | tig0008925:11776-11795 | Msa1346420:intron | 30.0% |
| AGGTTATCCTTGAAGAATTA+CGG | + | tig0008925:12139-12158 | Msa1346420:intron | 30.0% | |
| AAATTACCCGTAATTCTTCA+AGG | - | tig0008925:12149-12168 | Msa1346420:intergenic | 30.0% | |
| ACTAATTAAATTAGCCGCAT+TGG | + | tig0008925:12177-12196 | Msa1346420:intron | 30.0% | |
| TACTCTCAAATTTACCAATG+CGG | - | tig0008925:12194-12213 | Msa1346420:intergenic | 30.0% | |
| AAATTAGTCACACTTCTTCA+CGG | + | tig0008925:12284-12303 | Msa1346420:intron | 30.0% | |
| TGACATATTGCAATTGGAAA+AGG | + | tig0008925:12514-12533 | Msa1346420:intron | 30.0% | |
| !! | TAACTCAGGTTGAATATCAA+TGG | - | tig0008925:12822-12841 | Msa1346420:intergenic | 30.0% |
| ! | CTCTTTAGATCTTTAGGTTT+GGG | + | tig0008925:13004-13023 | Msa1346420:CDS | 30.0% |
| TTTAACAACTCCAAGTAGAA+TGG | - | tig0008925:13053-13072 | Msa1346420:intergenic | 30.0% | |
| ! | TCTAGTGTTATTGATCGATT+TGG | + | tig0008925:13094-13113 | Msa1346420:CDS | 30.0% |
| ! | TGCCCTAAATACATTTGTTA+AGG | + | tig0008925:13221-13240 | Msa1346420:intron | 30.0% |
| !!! | AGAATTTTTCAAGACACATG+TGG | + | tig0008925:13331-13350 | Msa1346420:intron | 30.0% |
| GGTACAAATGACATATCAAA+AGG | + | tig0008925:13942-13961 | Msa1346420:CDS | 30.0% | |
| ATCAAAAGGCAATGCAATAT+TGG | + | tig0008925:13956-13975 | Msa1346420:CDS | 30.0% | |
| TTTACTATGTTTCTTTGCTG+CGG | + | tig0008925:13986-14005 | Msa1346420:CDS | 30.0% | |
| TCCAGTGCTTCTTATATTTA+CGG | - | tig0008925:14066-14085 | Msa1346420:intergenic | 30.0% | |
| !! | ATGTTATGCCACTTTAAGTT+CGG | + | tig0008925:14149-14168 | Msa1346420:CDS | 30.0% |
| !! | ATTTTTGTTCTATGCTGGTT+GGG | + | tig0008925:14175-14194 | Msa1346420:CDS | 30.0% |
| !!! | GTAAACATTGGTTTTGGTAT+CGG | + | tig0008925:14279-14298 | Msa1346420:CDS | 30.0% |
| !!! | TTTTGGTATCGGTTTGTTAA+AGG | + | tig0008925:14290-14309 | Msa1346420:CDS | 30.0% |
| !! | CAGCCATTTTCCAAATATAG+AGG | - | tig0008925:10560-10579 | Msa1346420:intergenic | 35.0% |
| CTCTATATTTGGAAAATGGC+TGG | + | tig0008925:10558-10577 | Msa1346420:exon | 35.0% | |
| TATATTTGGAAAATGGCTGG+TGG | + | tig0008925:10561-10580 | Msa1346420:exon | 35.0% | |
| ! | CAAGTTACTGCTACCAATTT+TGG | + | tig0008925:10603-10622 | Msa1346420:CDS | 35.0% |
| !! | TGTTAGTTTGCCACCAAAAT+TGG | - | tig0008925:10619-10638 | Msa1346420:intergenic | 35.0% |
| CGATGTCATATCCAAAAAGA+AGG | - | tig0008925:10683-10702 | Msa1346420:intergenic | 35.0% | |
| TTTAAGAAATGGCTTCATGG+TGG | - | tig0008925:10834-10853 | Msa1346420:intergenic | 35.0% | |
| ACATCTTCTCATTATCTAGC+TGG | + | tig0008925:10941-10960 | Msa1346420:CDS | 35.0% | |
| AGAAACGTCATCATAATAGG+TGG | + | tig0008925:11013-11032 | Msa1346420:CDS | 35.0% | |
| ! | TCCTAAATTTAGAACGGATG+GGG | - | tig0008925:11176-11195 | Msa1346420:intergenic | 35.0% |
| AAAAAACGGAAAAACGGACA+CGG | + | tig0008925:12059-12078 | Msa1346420:intron | 35.0% | |
| GGTTATCCTTGAAGAATTAC+GGG | + | tig0008925:12140-12159 | Msa1346420:intron | 35.0% | |
| ! | TTATGATAGGGCACTAGTTA+AGG | + | tig0008925:12459-12478 | Msa1346420:intron | 35.0% |
| ! | ACAAGCTTCCCATTCTTTTT+GGG | + | tig0008925:12593-12612 | Msa1346420:CDS | 35.0% |
| TACCAACTCCCAAAAAGAAT+GGG | - | tig0008925:12604-12623 | Msa1346420:intergenic | 35.0% | |
| ATACCAACTCCCAAAAAGAA+TGG | - | tig0008925:12605-12624 | Msa1346420:intergenic | 35.0% | |
| TTTGCAGGTTGCATAAACTA+TGG | + | tig0008925:12629-12648 | Msa1346420:CDS | 35.0% | |
| !! | CTGTAACTTGTTGGAAAAAG+GGG | - | tig0008925:12952-12971 | Msa1346420:intergenic | 35.0% |
| !! | CCTGTAACTTGTTGGAAAAA+GGG | - | tig0008925:12953-12972 | Msa1346420:intergenic | 35.0% |
| ! | CCTTTTTCCAACAAGTTACA+GGG | + | tig0008925:12951-12970 | Msa1346420:CDS | 35.0% |
| CCTAAAGATCTAAAGAGGTT+AGG | - | tig0008925:13001-13020 | Msa1346420:intergenic | 35.0% | |
| CCTAACCTCTTTAGATCTTT+AGG | + | tig0008925:12998-13017 | Msa1346420:CDS | 35.0% | |
| CCAAACCTAAAGATCTAAAG+AGG | - | tig0008925:13006-13025 | Msa1346420:intergenic | 35.0% | |
| ! | CCTCTTTAGATCTTTAGGTT+TGG | + | tig0008925:13003-13022 | Msa1346420:CDS | 35.0% |
| TTACTTTCTGCCATTCTACT+TGG | + | tig0008925:13040-13059 | Msa1346420:CDS | 35.0% | |
| CAATAACACTAGAAGAGATG+AGG | - | tig0008925:13087-13106 | Msa1346420:intergenic | 35.0% | |
| GAAGATTCTTGTTCGTTACT+GGG | + | tig0008925:13119-13138 | Msa1346420:CDS | 35.0% | |
| AAGATTCTTGTTCGTTACTG+GGG | + | tig0008925:13120-13139 | Msa1346420:CDS | 35.0% | |
| !! | GTATTTAGGGCAATTTTGGT+AGG | - | tig0008925:13213-13232 | Msa1346420:intergenic | 35.0% |
| CTATTTGCCACAATTTAAGG+AGG | - | tig0008925:13407-13426 | Msa1346420:intergenic | 35.0% | |
| GCACTATTTGCCACAATTTA+AGG | - | tig0008925:13410-13429 | Msa1346420:intergenic | 35.0% | |
| GGCAAATAGTGCATTGTAAT+TGG | + | tig0008925:13418-13437 | Msa1346420:intron | 35.0% | |
| !!! | CTGGAAGTGCTTGTATTTTT+TGG | + | tig0008925:13591-13610 | Msa1346420:intron | 35.0% |
| TTACTATGTTTCTTTGCTGC+GGG | + | tig0008925:13987-14006 | Msa1346420:CDS | 35.0% | |
| CCAGTGCTTCTTATATTTAC+GGG | - | tig0008925:14065-14084 | Msa1346420:intergenic | 35.0% | |
| TGTTGCTGTGCATTTCATAA+TGG | + | tig0008925:14097-14116 | Msa1346420:CDS | 35.0% | |
| !! | TGTTATGCCACTTTAAGTTC+GGG | + | tig0008925:14150-14169 | Msa1346420:CDS | 35.0% |
| ! | CATTTTTGTTCTATGCTGGT+TGG | + | tig0008925:14174-14193 | Msa1346420:CDS | 35.0% |
| AAAGCAATTCCTTTAGTCTC+CGG | - | tig0008925:14236-14255 | Msa1346420:intergenic | 35.0% | |
| ACATCATATGGGGTAAACAT+TGG | + | tig0008925:14267-14286 | Msa1346420:CDS | 35.0% | |
| !!! | TATGGGGTAAACATTGGTTT+TGG | + | tig0008925:14273-14292 | Msa1346420:CDS | 35.0% |
| ! | GTTACTGCTACCAATTTTGG+TGG | + | tig0008925:10606-10625 | Msa1346420:CDS | 40.0% |
| GGATATGACATCGGAATTTC+AGG | + | tig0008925:10690-10709 | Msa1346420:CDS | 40.0% | |
| CTTCCCAGACATTCTTAGAA+AGG | + | tig0008925:10859-10878 | Msa1346420:CDS | 40.0% | |
| ! | CTGCCTTTCTAAGAATGTCT+GGG | - | tig0008925:10865-10884 | Msa1346420:intergenic | 40.0% |
| CGGAGAAACGTCATCATAAT+AGG | + | tig0008925:11010-11029 | Msa1346420:CDS | 40.0% | |
| ! | ACCCCATCCGTTCTAAATTT+AGG | + | tig0008925:11172-11191 | Msa1346420:intron | 40.0% |
| TGCTTATATTATGGGACGGA+GGG | - | tig0008925:11321-11340 | Msa1346420:intergenic | 40.0% | |
| TTGCTTATATTATGGGACGG+AGG | - | tig0008925:11322-11341 | Msa1346420:intergenic | 40.0% | |
| GCAACTTCAGATAGGTACAA+TGG | - | tig0008925:12545-12564 | Msa1346420:intergenic | 40.0% | |
| ! | CACAAGCTTCCCATTCTTTT+TGG | + | tig0008925:12592-12611 | Msa1346420:CDS | 40.0% |
| !! | TTCCCATTCTTTTTGGGAGT+TGG | + | tig0008925:12599-12618 | Msa1346420:CDS | 40.0% |
| !! | GGAGTTGGTATAATCTTTGC+AGG | + | tig0008925:12614-12633 | Msa1346420:CDS | 40.0% |
| !! | CTCAGGTTGAATATCAATGG+AGG | - | tig0008925:12819-12838 | Msa1346420:intergenic | 40.0% |
| AAGGGAATATAGACCTCAGT+TGG | + | tig0008925:12910-12929 | Msa1346420:CDS | 40.0% | |
| !! | ATATAGACCTCAGTTGGTGA+TGG | + | tig0008925:12916-12935 | Msa1346420:CDS | 40.0% |
| ! | CCCTTTTTCCAACAAGTTAC+AGG | + | tig0008925:12950-12969 | Msa1346420:CDS | 40.0% |
| !! | CCCTGTAACTTGTTGGAAAA+AGG | - | tig0008925:12954-12973 | Msa1346420:intergenic | 40.0% |
| ! | CGTTTATCCCTGTAACTTGT+TGG | - | tig0008925:12961-12980 | Msa1346420:intergenic | 40.0% |
| CGAAGATTCTTGTTCGTTAC+TGG | + | tig0008925:13118-13137 | Msa1346420:CDS | 40.0% | |
| AGATTCTTGTTCGTTACTGG+GGG | + | tig0008925:13121-13140 | Msa1346420:CDS | 40.0% | |
| TATGAACACCATGAAGCTTG+CGG | + | tig0008925:13884-13903 | Msa1346420:intron | 40.0% | |
| TTTACGGGAAAAATCTCAGC+TGG | - | tig0008925:14050-14069 | Msa1346420:intergenic | 40.0% | |
| ! | CCCGTAAATATAAGAAGCAC+TGG | + | tig0008925:14062-14081 | Msa1346420:CDS | 40.0% |
| !! | GTTATGCCACTTTAAGTTCG+GGG | + | tig0008925:14151-14170 | Msa1346420:CDS | 40.0% |
| AAAATGCCCCGAACTTAAAG+TGG | - | tig0008925:14160-14179 | Msa1346420:intergenic | 40.0% | |
| ! | TTTTTCTTGCCGGAGACTAA+AGG | + | tig0008925:14224-14243 | Msa1346420:CDS | 40.0% |
| GGAGACTAAAGGAATTGCTT+TGG | + | tig0008925:14235-14254 | Msa1346420:CDS | 40.0% | |
| TGGAGTCAATGCACATCATA+TGG | + | tig0008925:14255-14274 | Msa1346420:CDS | 40.0% | |
| GGAGTCAATGCACATCATAT+GGG | + | tig0008925:14256-14275 | Msa1346420:CDS | 40.0% | |
| GAGTCAATGCACATCATATG+GGG | + | tig0008925:14257-14276 | Msa1346420:CDS | 40.0% | |
| !! | CGGTTTGTTAAAGGAGAAGA+TGG | + | tig0008925:14299-14318 | Msa1346420:CDS | 40.0% |
| GTTAAAGGAGAAGATGGAGA+AGG | + | tig0008925:14305-14324 | Msa1346420:CDS | 40.0% | |
| ATTTGGAAAATGGCTGGTGG+AGG | + | tig0008925:10564-10583 | Msa1346420:exon | 45.0% | |
| ACTAGATGCAGCAACTATGC+AGG | - | tig0008925:10658-10677 | Msa1346420:intergenic | 45.0% | |
| TGCATAGTTGCTGCATCTAG+TGG | + | tig0008925:10657-10676 | Msa1346420:CDS | 45.0% | |
| ! | GCATCTAGTGGCCTTCTTTT+TGG | + | tig0008925:10669-10688 | Msa1346420:CDS | 45.0% |
| ! | GCTGCCTTTCTAAGAATGTC+TGG | - | tig0008925:10866-10885 | Msa1346420:intergenic | 45.0% |
| GACATTCTTAGAAAGGCAGC+TGG | + | tig0008925:10866-10885 | Msa1346420:CDS | 45.0% | |
| TAGAAAGGCAGCTGGTACTA+AGG | + | tig0008925:10874-10893 | Msa1346420:CDS | 45.0% | |
| TGGATTTGTGTCGTCACTTG+TGG | + | tig0008925:10961-10980 | Msa1346420:CDS | 45.0% | |
| AGCAAAGCTACGACGATGTT+TGG | + | tig0008925:10986-11005 | Msa1346420:CDS | 45.0% | |
| AAGCTACGACGATGTTTGGT+CGG | + | tig0008925:10990-11009 | Msa1346420:CDS | 45.0% | |
| ACACGACCCAAGATAAGCAT+AGG | - | tig0008925:11088-11107 | Msa1346420:intergenic | 45.0% | |
| ATCTTGGGTCGTGTTCTTCT+TGG | + | tig0008925:11094-11113 | Msa1346420:CDS | 45.0% | |
| TCTTGGGTCGTGTTCTTCTT+GGG | + | tig0008925:11095-11114 | Msa1346420:CDS | 45.0% | |
| CTTATATTATGGGACGGAGG+GGG | - | tig0008925:11319-11338 | Msa1346420:intergenic | 45.0% | |
| GCTTATATTATGGGACGGAG+GGG | - | tig0008925:11320-11339 | Msa1346420:intergenic | 45.0% | |
| TTGGTGGAGCAACTTCAGAT+AGG | - | tig0008925:12553-12572 | Msa1346420:intergenic | 45.0% | |
| CTGAAGTTGCTCCACCAAAA+TGG | + | tig0008925:12555-12574 | Msa1346420:CDS | 45.0% | |
| CCAATGGTAATTACAGCTCC+AGG | - | tig0008925:12707-12726 | Msa1346420:intergenic | 45.0% | |
| CCTGGAGCTGTAATTACCAT+TGG | + | tig0008925:12704-12723 | Msa1346420:CDS | 45.0% | |
| !! | AGTTATGAGGAAGGCACCAA+TGG | - | tig0008925:12723-12742 | Msa1346420:intergenic | 45.0% |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | tig0008925:13390-13409 | Msa1346420:intergenic | 45.0% |
| AGCCACACCTCCTTAAATTG+TGG | + | tig0008925:13397-13416 | Msa1346420:intron | 45.0% | |
| TGCCACAATTTAAGGAGGTG+TGG | - | tig0008925:13402-13421 | Msa1346420:intergenic | 45.0% | |
| ! | TGTTTCTTTGCTGCGGGTTT+TGG | + | tig0008925:13993-14012 | Msa1346420:CDS | 45.0% |
| !!! | CTGCGGGTTTTGGTTTATCA+TGG | + | tig0008925:14003-14022 | Msa1346420:CDS | 45.0% |
| CTGGAATTAGCCATGCTAGA+GGG | - | tig0008925:14031-14050 | Msa1346420:intergenic | 45.0% | |
| !! | GGGGCATTTTTGTTCTATGC+TGG | + | tig0008925:14170-14189 | Msa1346420:CDS | 45.0% |
| !! | AAAGAAATAATTAATATAAT+TGG | - | tig0008925:11270-11289 | Msa1346420:intergenic | 5.0% |
| !! | ATAATAATACAATAATTATA+AGG | - | tig0008925:12434-12453 | Msa1346420:intergenic | 5.0% |
| !! | ATAATTATTGTATTATTATT+AGG | + | tig0008925:12435-12454 | Msa1346420:intron | 5.0% |
| !! | TAATTATTGTATTATTATTA+GGG | + | tig0008925:12436-12455 | Msa1346420:intron | 5.0% |
| GGTGGTATTGTCTTCCTTGC+TGG | + | tig0008925:11031-11050 | Msa1346420:CDS | 50.0% | |
| GGTATTGTCTTCCTTGCTGG+TGG | + | tig0008925:11034-11053 | Msa1346420:CDS | 50.0% | |
| !! | CTTGCTGGTGGTGCCATTAA+CGG | + | tig0008925:11046-11065 | Msa1346420:CDS | 50.0% |
| GGTCGTGTTCTTCTTGGGTT+AGG | + | tig0008925:11100-11119 | Msa1346420:CDS | 50.0% | |
| ! | GTTCTTCTTGGGTTAGGCGT+CGG | + | tig0008925:11106-11125 | Msa1346420:CDS | 50.0% |
| TGGGGATGGAGACTATCTCT+TGG | + | tig0008925:12668-12687 | Msa1346420:CDS | 50.0% | |
| TGTTGGGCGTGTCAGTTATG+AGG | - | tig0008925:12736-12755 | Msa1346420:intergenic | 50.0% | |
| CCACGTTCGACTAAGCTGTT+GGG | - | tig0008925:12752-12771 | Msa1346420:intergenic | 50.0% | |
| ACCACGTTCGACTAAGCTGT+TGG | - | tig0008925:12753-12772 | Msa1346420:intergenic | 50.0% | |
| GCAAATGCCATCACCAACTG+AGG | - | tig0008925:12926-12945 | Msa1346420:intergenic | 50.0% | |
| AATGGACACCGCAAGCTTCA+TGG | - | tig0008925:13895-13914 | Msa1346420:intergenic | 50.0% | |
| TATCATGGAGCCCTCTAGCA+TGG | + | tig0008925:14018-14037 | Msa1346420:CDS | 50.0% | |
| GCTGGAATTAGCCATGCTAG+AGG | - | tig0008925:14032-14051 | Msa1346420:intergenic | 50.0% | |
| GGCTGGTGGAGGATTCTCTA+TGG | + | tig0008925:10575-10594 | Msa1346420:CDS | 55.0% | |
| CGTTAATGGCACCACCAGCA+AGG | - | tig0008925:11048-11067 | Msa1346420:intergenic | 55.0% | |
| GTTGCTCCACCAAAATGGCG+AGG | + | tig0008925:12560-12579 | Msa1346420:CDS | 55.0% | |
| !! | AAAGCGCCTCGCCATTTTGG+TGG | - | tig0008925:12569-12588 | Msa1346420:intergenic | 55.0% |
| !! | CTCAAAGCGCCTCGCCATTT+TGG | - | tig0008925:12572-12591 | Msa1346420:intergenic | 55.0% |
| ATGGCACTGCCAAGCACACA+TGG | + | tig0008925:12648-12667 | Msa1346420:CDS | 55.0% | |
| TGGCACTGCCAAGCACACAT+GGG | + | tig0008925:12649-12668 | Msa1346420:CDS | 55.0% | |
| TCTCCATCCCCATGTGTGCT+TGG | - | tig0008925:12660-12679 | Msa1346420:intergenic | 55.0% | |
| CTTGGACTTGCAGTTGTGCC+TGG | + | tig0008925:12686-12705 | Msa1346420:CDS | 55.0% | |
| GGGCGTGTCAGTTATGAGGA+AGG | - | tig0008925:12732-12751 | Msa1346420:intergenic | 55.0% | |
| CCCAACAGCTTAGTCGAACG+TGG | + | tig0008925:12749-12768 | Msa1346420:CDS | 55.0% | |
| AGCTACCACTGCCAGCACAA+TGG | - | tig0008925:13913-13932 | Msa1346420:intergenic | 55.0% | |
| ! | ATTGTGCTGGCAGTGGTAGC+TGG | + | tig0008925:13912-13931 | Msa1346420:CDS | 55.0% |
| GCAGTGGTAGCTGGTGTTCA+TGG | + | tig0008925:13921-13940 | Msa1346420:CDS | 55.0% | |
| !! | GCTGGTGGTGCCATTAACGG+AGG | + | tig0008925:11049-11068 | Msa1346420:CDS | 60.0% |
| GGCACTGCCAAGCACACATG+GGG | + | tig0008925:12650-12669 | Msa1346420:CDS | 60.0% | |
| CTGCCAAGCACACATGGGGA+TGG | + | tig0008925:12654-12673 | Msa1346420:CDS | 60.0% | |
| GCTTGCGGTGTCCATTGTGC+TGG | + | tig0008925:13899-13918 | Msa1346420:intron | 60.0% | |
| ! | GGTGTCCATTGTGCTGGCAG+TGG | + | tig0008925:13905-13924 | Msa1346420:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0008925 | gene | 10511 | 14340 | 10511 | ID=Msa1346420;Name=Msa1346420 |
| tig0008925 | mRNA | 10511 | 14340 | 10511 | ID=Msa1346420-mRNA-1;Parent=Msa1346420;Name=Msa1346420-mRNA-1;_AED=0.03;_eAED=0.03;_QI=62|0.66|0.25|1|1|1|4|0|509 |
| tig0008925 | exon | 10511 | 10711 | 10511 | ID=Msa1346420-mRNA-1:exon:5490;Parent=Msa1346420-mRNA-1 |
| tig0008925 | exon | 10822 | 11141 | 10822 | ID=Msa1346420-mRNA-1:exon:5491;Parent=Msa1346420-mRNA-1 |
| tig0008925 | exon | 12536 | 13165 | 12536 | ID=Msa1346420-mRNA-1:exon:5492;Parent=Msa1346420-mRNA-1 |
| tig0008925 | exon | 13900 | 14340 | 13900 | ID=Msa1346420-mRNA-1:exon:5493;Parent=Msa1346420-mRNA-1 |
| tig0008925 | five_prime_UTR | 10511 | 10572 | 10511 | ID=Msa1346420-mRNA-1:five_prime_utr;Parent=Msa1346420-mRNA-1 |
| tig0008925 | CDS | 10573 | 10711 | 10573 | ID=Msa1346420-mRNA-1:cds;Parent=Msa1346420-mRNA-1 |
| tig0008925 | CDS | 10822 | 11141 | 10822 | ID=Msa1346420-mRNA-1:cds;Parent=Msa1346420-mRNA-1 |
| tig0008925 | CDS | 12536 | 13165 | 12536 | ID=Msa1346420-mRNA-1:cds;Parent=Msa1346420-mRNA-1 |
| tig0008925 | CDS | 13900 | 14340 | 13900 | ID=Msa1346420-mRNA-1:cds;Parent=Msa1346420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
