Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418190 | XP_013460891.1 | 91.749 | 509 | 42 | 0 | 1 | 509 | 1 | 509 | 0.0 | 950 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418190 | sp|Q93Y91|STP5_ARATH | 58.449 | 503 | 205 | 3 | 1 | 500 | 1 | 502 | 0.0 | 616 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418190 | A0A072V9T5 | 91.749 | 509 | 42 | 0 | 1 | 509 | 1 | 509 | 0.0 | 950 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000190 | Msa0418190 | 0.803125 | 4.046539e-49 | -8.615850e-47 |
Msa0022550 | Msa0418190 | 0.807403 | 5.142603e-50 | -8.615850e-47 |
Msa0024550 | Msa0418190 | 0.820827 | 5.582738e-53 | -8.615850e-47 |
Msa0043560 | Msa0418190 | 0.806297 | 8.806983e-50 | -8.615850e-47 |
Msa0061340 | Msa0418190 | 0.810496 | 1.120036e-50 | -8.615850e-47 |
Msa0081520 | Msa0418190 | 0.805524 | 1.280576e-49 | -8.615850e-47 |
Msa0120400 | Msa0418190 | 0.817780 | 2.761403e-52 | -8.615850e-47 |
Msa0142460 | Msa0418190 | 0.808106 | 3.644738e-50 | -8.615850e-47 |
Msa0152400 | Msa0418190 | 0.816708 | 4.810405e-52 | -8.615850e-47 |
Msa0168500 | Msa0418190 | 0.802042 | 6.768006e-49 | -8.615850e-47 |
Msa0211150 | Msa0418190 | 0.803134 | 4.029241e-49 | -8.615850e-47 |
Msa0224780 | Msa0418190 | 0.800363 | 1.492737e-48 | -8.615850e-47 |
Msa0225100 | Msa0418190 | 0.804997 | 1.651194e-49 | -8.615850e-47 |
Msa0367870 | Msa0418190 | 0.821357 | 4.215256e-53 | -8.615850e-47 |
Msa0378720 | Msa0418190 | 0.822270 | 2.591534e-53 | -8.615850e-47 |
Msa0392510 | Msa0418190 | 0.806838 | 6.771299e-50 | -8.615850e-47 |
Msa0405130 | Msa0418190 | 0.805411 | 1.352093e-49 | -8.615850e-47 |
Msa0418190 | Msa0460590 | 0.806863 | 6.690376e-50 | -8.615850e-47 |
Msa0418190 | Msa0464260 | 0.945948 | 1.170135e-104 | -8.615850e-47 |
Msa0418190 | Msa0464680 | 0.822628 | 2.139554e-53 | -8.615850e-47 |
Msa0418190 | Msa0467430 | 0.833111 | 6.433919e-56 | -8.615850e-47 |
Msa0418190 | Msa0474730 | 0.818376 | 2.024329e-52 | -8.615850e-47 |
Msa0418190 | Msa0495330 | 0.810091 | 1.369133e-50 | -8.615850e-47 |
Msa0418190 | Msa0523000 | 0.802395 | 5.725697e-49 | -8.615850e-47 |
Msa0418190 | Msa0614000 | 0.802354 | 5.837247e-49 | -8.615850e-47 |
Msa0418190 | Msa0626450 | 0.846700 | 1.842376e-59 | -8.615850e-47 |
Msa0418190 | Msa0626490 | 0.844313 | 8.169262e-59 | -8.615850e-47 |
Msa0418190 | Msa0637560 | 0.801447 | 8.965651e-49 | -8.615850e-47 |
Msa0418190 | Msa0638480 | 0.817004 | 4.129060e-52 | -8.615850e-47 |
Msa0418190 | Msa0664150 | 0.807585 | 4.704055e-50 | -8.615850e-47 |
Msa0418190 | Msa0664600 | 0.850592 | 1.537082e-60 | -8.615850e-47 |
Msa0418190 | Msa0697160 | 0.815520 | 8.863021e-52 | -8.615850e-47 |
Msa0418190 | Msa0727640 | 0.809117 | 2.217064e-50 | -8.615850e-47 |
Msa0418190 | Msa0733390 | 0.810827 | 9.495491e-51 | -8.615850e-47 |
Msa0418190 | Msa0760130 | 0.800491 | 1.405991e-48 | -8.615850e-47 |
Msa0418190 | Msa0768990 | 0.804633 | 1.966722e-49 | -8.615850e-47 |
Msa0418190 | Msa0769180 | 0.836426 | 9.423206e-57 | -8.615850e-47 |
Msa0418190 | Msa0795870 | 0.800270 | 1.559144e-48 | -8.615850e-47 |
Msa0418190 | Msa0832340 | 0.809258 | 2.067790e-50 | -8.615850e-47 |
Msa0418190 | Msa0841340 | 0.806124 | 9.578616e-50 | -8.615850e-47 |
Msa0418190 | Msa0861510 | 0.831330 | 1.774815e-55 | -8.615850e-47 |
Msa0418190 | Msa0861530 | 0.824894 | 6.301464e-54 | -8.615850e-47 |
Msa0418190 | Msa0861600 | 0.830824 | 2.363036e-55 | -8.615850e-47 |
Msa0418190 | Msa0875290 | 0.821677 | 3.554788e-53 | -8.615850e-47 |
Msa0418190 | Msa0967380 | 0.829996 | 3.764204e-55 | -8.615850e-47 |
Msa0418190 | Msa0967870 | 0.806428 | 8.267312e-50 | -8.615850e-47 |
Msa0418190 | Msa0974080 | 0.806746 | 7.082740e-50 | -8.615850e-47 |
Msa0418190 | Msa1005870 | 0.836562 | 8.702958e-57 | -8.615850e-47 |
Msa0418190 | Msa1019000 | 0.812386 | 4.351816e-51 | -8.615850e-47 |
Msa0418190 | Msa1019430 | 0.813231 | 2.841834e-51 | -8.615850e-47 |
Msa0418190 | Msa1019470 | 0.810552 | 1.088967e-50 | -8.615850e-47 |
Msa0418190 | Msa1020510 | 0.804448 | 2.149750e-49 | -8.615850e-47 |
Msa0418190 | Msa1028280 | 0.804031 | 2.624992e-49 | -8.615850e-47 |
Msa0418190 | Msa1043370 | 0.811130 | 8.164627e-51 | -8.615850e-47 |
Msa0418190 | Msa1044470 | 0.805691 | 1.181028e-49 | -8.615850e-47 |
Msa0418190 | Msa1047980 | 0.803010 | 4.274231e-49 | -8.615850e-47 |
Msa0418190 | Msa1092010 | 0.843308 | 1.518199e-58 | -8.615850e-47 |
Msa0418190 | Msa1101090 | 0.803292 | 3.736542e-49 | -8.615850e-47 |
Msa0418190 | Msa1112380 | 0.804217 | 2.402257e-49 | -8.615850e-47 |
Msa0418190 | Msa1121490 | 0.818354 | 2.047493e-52 | -8.615850e-47 |
Msa0418190 | Msa1123380 | 0.802491 | 5.471053e-49 | -8.615850e-47 |
Msa0418190 | Msa1137570 | 0.833448 | 5.302347e-56 | -8.615850e-47 |
Msa0418190 | Msa1140210 | 0.801494 | 8.771018e-49 | -8.615850e-47 |
Msa0418190 | Msa1147740 | 0.813258 | 2.803057e-51 | -8.615850e-47 |
Msa0418190 | Msa1196440 | 0.804195 | 2.427507e-49 | -8.615850e-47 |
Msa0418190 | Msa1199570 | 0.815512 | 8.900514e-52 | -8.615850e-47 |
Msa0418190 | Msa1208430 | 0.803289 | 3.742249e-49 | -8.615850e-47 |
Msa0418190 | Msa1236410 | 0.810549 | 1.090610e-50 | -8.615850e-47 |
Msa0418190 | Msa1238820 | 0.811034 | 8.566398e-51 | -8.615850e-47 |
Msa0418190 | Msa1298370 | 0.826804 | 2.218814e-54 | -8.615850e-47 |
Msa0418190 | Msa1328640 | 0.804745 | 1.864361e-49 | -8.615850e-47 |
Msa0418190 | Msa1328710 | 0.807170 | 5.761751e-50 | -8.615850e-47 |
Msa0418190 | Msa1330420 | 0.810623 | 1.051418e-50 | -8.615850e-47 |
Msa0418190 | Msa1332000 | 0.814482 | 1.506626e-51 | -8.615850e-47 |
Msa0418190 | Msa1333480 | 0.801684 | 8.018638e-49 | -8.615850e-47 |
Msa0418190 | Msa1346420 | 0.918629 | 1.230919e-86 | -8.615850e-47 |
Msa0418190 | Msa1353470 | 0.800307 | 1.532656e-48 | -8.615850e-47 |
Msa0418190 | Msa1355370 | 0.879949 | 8.203824e-70 | -8.615850e-47 |
Msa0418190 | Msa1356830 | 0.802800 | 4.724171e-49 | -8.615850e-47 |
Msa0418190 | Msa1366340 | 0.801235 | 9.906690e-49 | -8.615850e-47 |
Msa0418190 | Msa1373100 | 0.800055 | 1.724844e-48 | -8.615850e-47 |
Msa0418190 | Msa1408620 | -0.813458 | 2.533261e-51 | -8.615850e-47 |
Msa0418190 | Msa1422420 | 0.802368 | 5.798324e-49 | -8.615850e-47 |
Msa0418190 | Msa1440960 | 0.838857 | 2.241433e-57 | -8.615850e-47 |
Msa0254790 | Msa0418190 | 0.801503 | 8.730537e-49 | -8.615850e-47 |
Msa0258310 | Msa0418190 | 0.830447 | 2.921709e-55 | -8.615850e-47 |
Msa0266180 | Msa0418190 | 0.800104 | 1.685761e-48 | -8.615850e-47 |
Msa0287740 | Msa0418190 | 0.809859 | 1.536247e-50 | -8.615850e-47 |
Msa0297790 | Msa0418190 | 0.803207 | 3.891118e-49 | -8.615850e-47 |
Msa0300270 | Msa0418190 | 0.804484 | 2.113135e-49 | -8.615850e-47 |
Msa0300320 | Msa0418190 | 0.811498 | 6.792932e-51 | -8.615850e-47 |
Msa0300690 | Msa0418190 | 0.815994 | 6.950132e-52 | -8.615850e-47 |
Msa0305700 | Msa0418190 | 0.804046 | 2.607157e-49 | -8.615850e-47 |
Msa0306370 | Msa0418190 | 0.801206 | 1.004323e-48 | -8.615850e-47 |
Msa0335800 | Msa0418190 | 0.802339 | 5.880797e-49 | -8.615850e-47 |
Msa0345330 | Msa0418190 | 0.825429 | 4.711104e-54 | -8.615850e-47 |
Msa0345410 | Msa0418190 | 0.820549 | 6.469524e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418190 | MtrunA17_Chr3g0115781 | 91.749 | 509 | 42 | 0 | 1 | 509 | 1 | 509 | 0.0 | 950 |
Msa0418190 | MtrunA17_Chr3g0115741 | 80.196 | 510 | 100 | 1 | 1 | 509 | 1 | 510 | 0.0 | 837 |
Msa0418190 | MtrunA17_Chr3g0115751 | 78.125 | 512 | 109 | 1 | 1 | 509 | 1 | 512 | 0.0 | 822 |
Msa0418190 | MtrunA17_Chr3g0115721 | 75.246 | 509 | 124 | 1 | 1 | 509 | 1 | 507 | 0.0 | 801 |
Msa0418190 | MtrunA17_Chr3g0115731 | 70.138 | 509 | 115 | 5 | 1 | 502 | 1 | 479 | 0.0 | 710 |
Msa0418190 | MtrunA17_Chr3g0115711 | 65.469 | 501 | 170 | 2 | 1 | 501 | 1 | 498 | 0.0 | 696 |
Msa0418190 | MtrunA17_Chr3g0078971 | 52.621 | 496 | 226 | 7 | 17 | 508 | 15 | 505 | 0.0 | 538 |
Msa0418190 | MtrunA17_Chr3g0078991 | 52.883 | 503 | 229 | 6 | 10 | 507 | 8 | 507 | 0.0 | 530 |
Msa0418190 | MtrunA17_Chr5g0394341 | 49.194 | 496 | 242 | 7 | 16 | 505 | 13 | 504 | 2.59e-179 | 513 |
Msa0418190 | MtrunA17_Chr4g0065311 | 49.590 | 488 | 241 | 4 | 11 | 497 | 7 | 490 | 2.40e-178 | 510 |
Msa0418190 | MtrunA17_Chr5g0445601 | 51.004 | 498 | 237 | 5 | 1 | 495 | 1 | 494 | 2.88e-173 | 498 |
Msa0418190 | MtrunA17_Chr7g0257631 | 51.004 | 498 | 237 | 5 | 1 | 495 | 35 | 528 | 3.10e-172 | 496 |
Msa0418190 | MtrunA17_Chr4g0065324 | 48.682 | 493 | 247 | 5 | 4 | 495 | 9 | 496 | 8.72e-170 | 489 |
Msa0418190 | MtrunA17_Chr5g0420841 | 48.988 | 494 | 245 | 5 | 15 | 503 | 11 | 502 | 3.74e-169 | 487 |
Msa0418190 | MtrunA17_Chr5g0437021 | 48.682 | 493 | 246 | 4 | 12 | 499 | 7 | 497 | 8.90e-167 | 481 |
Msa0418190 | MtrunA17_Chr5g0417611 | 48.538 | 513 | 255 | 6 | 1 | 508 | 1 | 509 | 3.00e-165 | 478 |
Msa0418190 | MtrunA17_Chr1g0164851 | 48.354 | 486 | 247 | 3 | 16 | 499 | 14 | 497 | 6.55e-164 | 475 |
Msa0418190 | MtrunA17_Chr1g0164871 | 48.148 | 486 | 248 | 3 | 16 | 499 | 14 | 497 | 7.11e-164 | 474 |
Msa0418190 | MtrunA17_Chr1g0205691 | 47.793 | 521 | 253 | 10 | 1 | 509 | 1 | 514 | 4.04e-163 | 473 |
Msa0418190 | MtrunA17_Chr3g0128081 | 48.828 | 512 | 252 | 6 | 1 | 507 | 1 | 507 | 6.83e-163 | 471 |
Msa0418190 | MtrunA17_Chr4g0048411 | 50.605 | 496 | 238 | 6 | 16 | 506 | 14 | 507 | 2.36e-160 | 465 |
Msa0418190 | MtrunA17_Chr8g0390261 | 47.358 | 492 | 250 | 7 | 20 | 508 | 21 | 506 | 1.61e-159 | 463 |
Msa0418190 | MtrunA17_Chr3g0085971 | 47.082 | 497 | 256 | 5 | 14 | 505 | 10 | 504 | 3.41e-159 | 462 |
Msa0418190 | MtrunA17_Chr1g0205681 | 44.246 | 504 | 271 | 7 | 1 | 499 | 1 | 499 | 1.13e-157 | 457 |
Msa0418190 | MtrunA17_Chr1g0205671 | 44.841 | 504 | 267 | 8 | 1 | 499 | 1 | 498 | 4.09e-157 | 456 |
Msa0418190 | MtrunA17_Chr6g0486681 | 45.168 | 507 | 270 | 7 | 1 | 503 | 1 | 503 | 2.79e-156 | 454 |
Msa0418190 | MtrunA17_Chr6g0486671 | 45.168 | 507 | 270 | 7 | 1 | 503 | 1 | 503 | 2.79e-156 | 454 |
Msa0418190 | MtrunA17_Chr8g0390141 | 46.154 | 494 | 258 | 8 | 20 | 509 | 21 | 510 | 1.66e-155 | 453 |
Msa0418190 | MtrunA17_Chr4g0048051 | 50.202 | 496 | 240 | 6 | 16 | 507 | 14 | 506 | 2.60e-149 | 437 |
Msa0418190 | MtrunA17_Chr3g0128171 | 47.903 | 453 | 228 | 5 | 52 | 498 | 1 | 451 | 3.74e-144 | 422 |
Msa0418190 | MtrunA17_Chr3g0078791 | 47.368 | 437 | 205 | 5 | 73 | 506 | 17 | 431 | 7.80e-138 | 405 |
Msa0418190 | MtrunA17_Chr3g0115771 | 61.661 | 313 | 75 | 4 | 152 | 463 | 5 | 273 | 1.60e-121 | 357 |
Msa0418190 | MtrunA17_Chr4g0065351 | 48.246 | 342 | 172 | 4 | 162 | 502 | 1 | 338 | 1.39e-110 | 332 |
Msa0418190 | MtrunA17_Chr4g0036021 | 31.417 | 487 | 286 | 10 | 29 | 493 | 31 | 491 | 6.80e-62 | 211 |
Msa0418190 | MtrunA17_Chr6g0485661 | 29.565 | 460 | 292 | 9 | 30 | 479 | 63 | 500 | 3.26e-61 | 209 |
Msa0418190 | MtrunA17_Chr4g0034681 | 30.123 | 488 | 292 | 12 | 29 | 493 | 34 | 495 | 6.24e-61 | 208 |
Msa0418190 | MtrunA17_Chr3g0144361 | 30.328 | 488 | 289 | 13 | 29 | 491 | 32 | 493 | 4.38e-58 | 201 |
Msa0418190 | MtrunA17_Chr8g0373531 | 32.477 | 428 | 253 | 8 | 92 | 492 | 67 | 485 | 5.90e-58 | 200 |
Msa0418190 | MtrunA17_Chr3g0115761 | 86.364 | 110 | 15 | 0 | 52 | 161 | 1 | 110 | 4.29e-57 | 186 |
Msa0418190 | MtrunA17_Chr2g0282031 | 30.042 | 476 | 293 | 14 | 26 | 489 | 53 | 500 | 1.64e-54 | 191 |
Msa0418190 | MtrunA17_Chr8g0390521 | 26.316 | 494 | 329 | 8 | 8 | 489 | 1 | 471 | 6.21e-54 | 189 |
Msa0418190 | MtrunA17_Chr5g0432581 | 27.756 | 508 | 320 | 10 | 8 | 492 | 2 | 485 | 3.20e-51 | 182 |
Msa0418190 | MtrunA17_Chr4g0021771 | 26.273 | 491 | 306 | 13 | 22 | 492 | 51 | 505 | 4.93e-51 | 182 |
Msa0418190 | MtrunA17_Chr4g0039651 | 28.033 | 478 | 301 | 12 | 26 | 486 | 46 | 497 | 4.78e-47 | 171 |
Msa0418190 | MtrunA17_Chr6g0457781 | 28.078 | 463 | 292 | 9 | 31 | 486 | 111 | 539 | 4.58e-45 | 166 |
Msa0418190 | MtrunA17_Chr4g0065341 | 48.667 | 150 | 77 | 0 | 4 | 153 | 6 | 155 | 4.02e-44 | 153 |
Msa0418190 | MtrunA17_Chr7g0250881 | 27.549 | 461 | 297 | 10 | 31 | 486 | 71 | 499 | 1.27e-43 | 161 |
Msa0418190 | MtrunA17_Chr8g0373181 | 27.047 | 403 | 287 | 2 | 84 | 486 | 87 | 482 | 5.02e-43 | 159 |
Msa0418190 | MtrunA17_Chr1g0213611 | 25.773 | 485 | 310 | 12 | 27 | 492 | 78 | 531 | 3.68e-40 | 152 |
Msa0418190 | MtrunA17_Chr7g0214451 | 27.158 | 475 | 302 | 14 | 31 | 492 | 39 | 482 | 6.37e-40 | 151 |
Msa0418190 | MtrunA17_Chr8g0373191 | 27.747 | 364 | 244 | 5 | 129 | 486 | 104 | 454 | 9.28e-40 | 149 |
Msa0418190 | MtrunA17_Chr1g0213631 | 26.650 | 394 | 270 | 7 | 108 | 492 | 52 | 435 | 1.57e-38 | 146 |
Msa0418190 | MtrunA17_Chr5g0403831 | 26.603 | 421 | 278 | 9 | 97 | 492 | 84 | 498 | 1.84e-38 | 147 |
Msa0418190 | MtrunA17_Chr4g0032021 | 27.273 | 484 | 304 | 12 | 24 | 486 | 95 | 551 | 7.64e-38 | 146 |
Msa0418190 | MtrunA17_Chr7g0259471 | 26.168 | 428 | 290 | 9 | 62 | 486 | 66 | 470 | 1.21e-37 | 144 |
Msa0418190 | MtrunA17_Chr1g0155221 | 24.390 | 410 | 290 | 4 | 84 | 486 | 89 | 485 | 4.34e-35 | 137 |
Msa0418190 | MtrunA17_Chr3g0119401 | 27.706 | 462 | 299 | 12 | 30 | 486 | 98 | 529 | 3.69e-34 | 135 |
Msa0418190 | MtrunA17_Chr2g0303731 | 30.588 | 340 | 209 | 8 | 36 | 366 | 37 | 358 | 5.81e-34 | 135 |
Msa0418190 | MtrunA17_Chr7g0259221 | 26.601 | 406 | 280 | 7 | 84 | 486 | 82 | 472 | 6.36e-34 | 134 |
Msa0418190 | MtrunA17_Chr2g0286721 | 25.542 | 415 | 274 | 8 | 84 | 486 | 89 | 480 | 7.10e-34 | 134 |
Msa0418190 | MtrunA17_Chr7g0273281 | 23.645 | 406 | 294 | 5 | 84 | 487 | 102 | 493 | 8.96e-34 | 134 |
Msa0418190 | MtrunA17_Chr2g0303701 | 31.361 | 338 | 208 | 8 | 36 | 367 | 37 | 356 | 9.32e-34 | 134 |
Msa0418190 | MtrunA17_Chr5g0446681 | 40.625 | 192 | 76 | 3 | 1 | 192 | 1 | 154 | 5.97e-33 | 127 |
Msa0418190 | MtrunA17_Chr5g0446681 | 48.120 | 133 | 68 | 1 | 375 | 506 | 154 | 286 | 1.92e-29 | 117 |
Msa0418190 | MtrunA17_Chr4g0066581 | 24.088 | 411 | 285 | 8 | 84 | 486 | 92 | 483 | 3.55e-32 | 129 |
Msa0418190 | MtrunA17_Chr8g0376631 | 31.077 | 325 | 199 | 8 | 36 | 353 | 37 | 343 | 4.08e-32 | 129 |
Msa0418190 | MtrunA17_Chr8g0376601 | 30.994 | 342 | 205 | 9 | 36 | 366 | 37 | 358 | 7.15e-32 | 129 |
Msa0418190 | MtrunA17_Chr4g0004821 | 25.597 | 461 | 309 | 10 | 30 | 487 | 41 | 470 | 1.16e-31 | 127 |
Msa0418190 | MtrunA17_Chr2g0290181 | 28.678 | 401 | 252 | 10 | 1 | 388 | 1 | 380 | 1.33e-31 | 128 |
Msa0418190 | MtrunA17_Chr8g0376611 | 35.200 | 250 | 155 | 4 | 108 | 351 | 26 | 274 | 1.12e-30 | 124 |
Msa0418190 | MtrunA17_Chr7g0228781 | 39.153 | 189 | 76 | 4 | 2 | 153 | 17 | 203 | 4.79e-29 | 114 |
Msa0418190 | MtrunA17_Chr6g0486021 | 23.822 | 382 | 274 | 6 | 109 | 487 | 117 | 484 | 1.63e-25 | 109 |
Msa0418190 | MtrunA17_Chr2g0290161 | 29.520 | 271 | 153 | 8 | 108 | 367 | 27 | 270 | 2.64e-22 | 99.8 |
Msa0418190 | MtrunA17_Chr3g0121674 | 23.649 | 296 | 211 | 6 | 204 | 492 | 2 | 289 | 1.35e-20 | 92.4 |
Msa0418190 | MtrunA17_Chr3g0146061 | 28.372 | 215 | 134 | 5 | 105 | 313 | 67 | 267 | 2.78e-18 | 88.2 |
Msa0418190 | MtrunA17_Chr3g0146061 | 25.943 | 212 | 135 | 5 | 285 | 483 | 519 | 721 | 1.22e-11 | 67.4 |
Msa0418190 | MtrunA17_Chr8g0370141 | 30.168 | 179 | 122 | 3 | 79 | 255 | 41 | 218 | 1.14e-17 | 85.1 |
Msa0418190 | MtrunA17_Chr5g0434231 | 33.333 | 171 | 88 | 4 | 89 | 258 | 9 | 154 | 5.65e-17 | 78.2 |
Msa0418190 | MtrunA17_Chr5g0407441 | 25.862 | 290 | 183 | 9 | 23 | 309 | 2 | 262 | 6.78e-17 | 84.0 |
Msa0418190 | MtrunA17_Chr3g0144261 | 31.361 | 169 | 111 | 5 | 108 | 273 | 68 | 234 | 1.06e-15 | 80.1 |
Msa0418190 | MtrunA17_Chr3g0144261 | 24.812 | 266 | 162 | 9 | 244 | 483 | 458 | 711 | 1.12e-12 | 70.5 |
Msa0418190 | MtrunA17_Chr5g0419321 | 27.746 | 173 | 122 | 3 | 85 | 255 | 75 | 246 | 4.75e-15 | 78.2 |
Msa0418190 | MtrunA17_Chr7g0273261 | 25.316 | 237 | 161 | 5 | 254 | 486 | 10 | 234 | 6.26e-15 | 74.7 |
Msa0418190 | MtrunA17_Chr5g0404191 | 26.667 | 180 | 127 | 1 | 84 | 263 | 90 | 264 | 1.61e-14 | 74.3 |
Msa0418190 | MtrunA17_Chr8g0370151 | 25.316 | 237 | 157 | 5 | 260 | 483 | 113 | 342 | 1.26e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418190 | AT1G34580.1 | 58.449 | 503 | 205 | 3 | 1 | 500 | 1 | 502 | 0.0 | 616 |
Msa0418190 | AT1G34580.2 | 57.965 | 452 | 187 | 2 | 52 | 500 | 1 | 452 | 0.0 | 553 |
Msa0418190 | AT5G26340.1 | 49.213 | 508 | 248 | 7 | 1 | 503 | 1 | 503 | 9.23e-180 | 515 |
Msa0418190 | AT1G11260.1 | 52.344 | 512 | 233 | 8 | 1 | 507 | 1 | 506 | 1.00e-177 | 510 |
Msa0418190 | AT4G02050.2 | 49.400 | 500 | 246 | 5 | 1 | 497 | 1 | 496 | 3.76e-175 | 503 |
Msa0418190 | AT4G02050.1 | 49.400 | 500 | 246 | 5 | 1 | 497 | 1 | 496 | 3.76e-175 | 503 |
Msa0418190 | AT3G19940.1 | 49.703 | 505 | 249 | 5 | 1 | 503 | 1 | 502 | 4.79e-173 | 498 |
Msa0418190 | AT3G19930.1 | 50.198 | 504 | 245 | 4 | 1 | 502 | 1 | 500 | 1.59e-172 | 496 |
Msa0418190 | AT3G19930.2 | 50.198 | 504 | 245 | 4 | 1 | 502 | 1 | 500 | 1.59e-172 | 496 |
Msa0418190 | AT1G50310.1 | 47.723 | 505 | 259 | 5 | 1 | 502 | 1 | 503 | 2.77e-168 | 486 |
Msa0418190 | AT5G23270.1 | 48.406 | 502 | 252 | 5 | 1 | 498 | 1 | 499 | 5.36e-166 | 480 |
Msa0418190 | AT4G21480.1 | 50.102 | 489 | 240 | 4 | 16 | 502 | 14 | 500 | 5.91e-166 | 479 |
Msa0418190 | AT5G61520.1 | 45.842 | 493 | 256 | 6 | 18 | 503 | 17 | 505 | 3.71e-159 | 462 |
Msa0418190 | AT1G77210.2 | 43.393 | 507 | 279 | 7 | 1 | 503 | 1 | 503 | 4.59e-153 | 446 |
Msa0418190 | AT1G77210.1 | 43.393 | 507 | 279 | 7 | 1 | 503 | 1 | 503 | 4.59e-153 | 446 |
Msa0418190 | AT5G26250.1 | 44.625 | 493 | 267 | 5 | 13 | 503 | 10 | 498 | 7.67e-149 | 436 |
Msa0418190 | AT3G05960.1 | 44.600 | 500 | 271 | 5 | 10 | 507 | 6 | 501 | 1.17e-148 | 435 |
Msa0418190 | AT5G61520.2 | 45.000 | 460 | 242 | 6 | 51 | 503 | 2 | 457 | 2.24e-143 | 420 |
Msa0418190 | AT1G07340.1 | 43.373 | 498 | 273 | 7 | 7 | 500 | 5 | 497 | 4.60e-133 | 395 |
Msa0418190 | AT1G50310.2 | 47.159 | 352 | 182 | 4 | 153 | 502 | 11 | 360 | 5.64e-115 | 344 |
Msa0418190 | AT1G77210.3 | 40.793 | 353 | 203 | 5 | 153 | 503 | 6 | 354 | 5.74e-100 | 305 |
Msa0418190 | AT2G16120.1 | 31.211 | 487 | 288 | 13 | 29 | 492 | 30 | 492 | 2.92e-60 | 207 |
Msa0418190 | AT2G16130.1 | 30.832 | 493 | 282 | 13 | 29 | 492 | 30 | 492 | 1.37e-59 | 205 |
Msa0418190 | AT3G18830.1 | 30.083 | 482 | 287 | 12 | 29 | 486 | 40 | 495 | 4.20e-59 | 204 |
Msa0418190 | AT2G18480.1 | 30.932 | 472 | 275 | 12 | 39 | 486 | 36 | 480 | 2.86e-57 | 199 |
Msa0418190 | AT4G36670.1 | 30.297 | 505 | 289 | 14 | 29 | 504 | 21 | 491 | 8.62e-57 | 197 |
Msa0418190 | AT2G20780.1 | 27.083 | 480 | 308 | 15 | 22 | 489 | 51 | 500 | 3.95e-47 | 172 |
Msa0418190 | AT2G20780.2 | 27.431 | 401 | 273 | 10 | 98 | 489 | 51 | 442 | 1.19e-45 | 166 |
Msa0418190 | AT3G05160.1 | 26.964 | 471 | 305 | 6 | 20 | 486 | 16 | 451 | 2.26e-44 | 162 |
Msa0418190 | AT3G05160.3 | 28.395 | 405 | 270 | 4 | 86 | 486 | 14 | 402 | 4.05e-44 | 161 |
Msa0418190 | AT3G05160.2 | 28.395 | 405 | 270 | 4 | 86 | 486 | 14 | 402 | 4.05e-44 | 161 |
Msa0418190 | AT5G16150.2 | 27.802 | 464 | 294 | 9 | 31 | 487 | 111 | 540 | 1.11e-43 | 162 |
Msa0418190 | AT5G16150.1 | 27.802 | 464 | 294 | 9 | 31 | 487 | 111 | 540 | 1.11e-43 | 162 |
Msa0418190 | AT5G16150.3 | 27.802 | 464 | 294 | 9 | 31 | 487 | 111 | 540 | 1.11e-43 | 162 |
Msa0418190 | AT1G75220.1 | 26.980 | 404 | 286 | 3 | 84 | 486 | 88 | 483 | 4.12e-42 | 157 |
Msa0418190 | AT5G27350.1 | 26.170 | 470 | 312 | 7 | 20 | 487 | 26 | 462 | 4.45e-42 | 157 |
Msa0418190 | AT3G05165.3 | 26.226 | 469 | 311 | 7 | 20 | 486 | 25 | 460 | 1.05e-41 | 155 |
Msa0418190 | AT3G05165.2 | 26.226 | 469 | 311 | 7 | 20 | 486 | 25 | 460 | 1.05e-41 | 155 |
Msa0418190 | AT3G05165.1 | 26.226 | 469 | 311 | 7 | 20 | 486 | 25 | 460 | 1.05e-41 | 155 |
Msa0418190 | AT5G17010.1 | 28.041 | 485 | 292 | 12 | 26 | 486 | 48 | 499 | 1.70e-41 | 155 |
Msa0418190 | AT5G17010.3 | 28.041 | 485 | 292 | 12 | 26 | 486 | 48 | 499 | 1.70e-41 | 155 |
Msa0418190 | AT5G17010.4 | 28.041 | 485 | 292 | 12 | 26 | 486 | 48 | 499 | 1.70e-41 | 155 |
Msa0418190 | AT1G08900.5 | 26.829 | 410 | 274 | 6 | 84 | 486 | 23 | 413 | 4.06e-40 | 150 |
Msa0418190 | AT1G08900.3 | 26.829 | 410 | 274 | 6 | 84 | 486 | 57 | 447 | 9.27e-40 | 150 |
Msa0418190 | AT1G08900.1 | 26.829 | 410 | 274 | 6 | 84 | 486 | 65 | 455 | 1.29e-39 | 149 |
Msa0418190 | AT1G08900.2 | 26.829 | 410 | 274 | 6 | 84 | 486 | 65 | 455 | 1.29e-39 | 149 |
Msa0418190 | AT2G48020.2 | 25.799 | 407 | 286 | 5 | 84 | 488 | 68 | 460 | 4.62e-39 | 148 |
Msa0418190 | AT2G48020.1 | 25.799 | 407 | 286 | 5 | 84 | 488 | 68 | 460 | 4.62e-39 | 148 |
Msa0418190 | AT1G19450.1 | 26.551 | 403 | 289 | 2 | 84 | 486 | 89 | 484 | 8.31e-39 | 148 |
Msa0418190 | AT5G59250.1 | 27.066 | 484 | 305 | 12 | 24 | 486 | 97 | 553 | 8.34e-39 | 149 |
Msa0418190 | AT3G05400.1 | 25.990 | 404 | 287 | 5 | 84 | 487 | 66 | 457 | 1.69e-38 | 146 |
Msa0418190 | AT4G04750.1 | 28.030 | 396 | 261 | 8 | 98 | 486 | 90 | 468 | 6.79e-38 | 145 |
Msa0418190 | AT4G04750.2 | 28.030 | 396 | 261 | 8 | 98 | 486 | 90 | 468 | 6.79e-38 | 145 |
Msa0418190 | AT4G04750.3 | 27.481 | 393 | 267 | 6 | 98 | 486 | 134 | 512 | 1.33e-37 | 145 |
Msa0418190 | AT2G43330.1 | 25.299 | 502 | 334 | 13 | 2 | 492 | 11 | 482 | 5.11e-37 | 143 |
Msa0418190 | AT3G03090.1 | 27.601 | 471 | 298 | 13 | 33 | 486 | 55 | 499 | 6.66e-37 | 143 |
Msa0418190 | AT1G08930.1 | 24.307 | 469 | 320 | 7 | 20 | 486 | 53 | 488 | 8.31e-37 | 142 |
Msa0418190 | AT1G08930.2 | 24.307 | 469 | 320 | 7 | 20 | 486 | 53 | 488 | 8.31e-37 | 142 |
Msa0418190 | AT3G05165.4 | 25.408 | 429 | 281 | 6 | 20 | 444 | 25 | 418 | 2.47e-36 | 140 |
Msa0418190 | AT3G05165.5 | 25.408 | 429 | 281 | 6 | 20 | 444 | 25 | 418 | 2.47e-36 | 140 |
Msa0418190 | AT3G05165.6 | 25.523 | 478 | 302 | 10 | 20 | 491 | 25 | 454 | 3.25e-36 | 141 |
Msa0418190 | AT5G27360.1 | 24.257 | 404 | 288 | 5 | 86 | 486 | 77 | 465 | 1.73e-35 | 138 |
Msa0418190 | AT1G30220.1 | 31.322 | 348 | 207 | 8 | 36 | 376 | 39 | 361 | 3.62e-35 | 139 |
Msa0418190 | AT3G05155.1 | 24.533 | 428 | 301 | 9 | 64 | 486 | 45 | 455 | 3.86e-35 | 137 |
Msa0418190 | AT5G27360.3 | 24.257 | 404 | 288 | 5 | 86 | 486 | 125 | 513 | 4.82e-35 | 138 |
Msa0418190 | AT3G05400.2 | 25.743 | 404 | 268 | 6 | 84 | 487 | 66 | 437 | 5.31e-35 | 136 |
Msa0418190 | AT1G54730.2 | 24.891 | 458 | 309 | 7 | 31 | 486 | 38 | 462 | 5.39e-35 | 137 |
Msa0418190 | AT1G08890.1 | 24.760 | 416 | 285 | 5 | 84 | 491 | 67 | 462 | 1.23e-34 | 135 |
Msa0418190 | AT1G05030.1 | 27.706 | 462 | 298 | 11 | 31 | 487 | 85 | 515 | 6.42e-34 | 134 |
Msa0418190 | AT1G08900.4 | 26.344 | 372 | 248 | 6 | 84 | 448 | 65 | 417 | 1.29e-33 | 132 |
Msa0418190 | AT4G04760.3 | 25.735 | 408 | 284 | 6 | 84 | 486 | 12 | 405 | 1.52e-33 | 132 |
Msa0418190 | AT4G04760.1 | 25.735 | 408 | 284 | 6 | 84 | 486 | 71 | 464 | 3.27e-33 | 132 |
Msa0418190 | AT1G05030.2 | 28.087 | 413 | 279 | 8 | 80 | 487 | 64 | 463 | 4.43e-33 | 131 |
Msa0418190 | AT5G27360.2 | 24.791 | 359 | 252 | 5 | 131 | 486 | 18 | 361 | 5.14e-33 | 129 |
Msa0418190 | AT5G27360.5 | 24.791 | 359 | 252 | 5 | 131 | 486 | 18 | 361 | 5.14e-33 | 129 |
Msa0418190 | AT4G04760.2 | 25.369 | 406 | 285 | 6 | 84 | 486 | 71 | 461 | 8.82e-32 | 128 |
Msa0418190 | AT1G79820.2 | 25.482 | 467 | 302 | 15 | 30 | 487 | 59 | 488 | 1.81e-31 | 127 |
Msa0418190 | AT1G79820.1 | 25.482 | 467 | 302 | 15 | 30 | 487 | 59 | 488 | 1.81e-31 | 127 |
Msa0418190 | AT5G18840.1 | 24.519 | 416 | 277 | 8 | 84 | 486 | 84 | 475 | 1.92e-31 | 127 |
Msa0418190 | AT1G54730.5 | 24.123 | 456 | 294 | 7 | 31 | 486 | 38 | 441 | 2.60e-31 | 126 |
Msa0418190 | AT3G05150.1 | 26.847 | 406 | 280 | 8 | 84 | 486 | 75 | 466 | 5.45e-31 | 125 |
Msa0418190 | AT3G05150.3 | 26.847 | 406 | 280 | 8 | 84 | 486 | 75 | 466 | 5.45e-31 | 125 |
Msa0418190 | AT3G05150.2 | 26.847 | 406 | 280 | 8 | 84 | 486 | 75 | 466 | 6.26e-31 | 125 |
Msa0418190 | AT1G54730.3 | 24.760 | 416 | 278 | 7 | 31 | 444 | 38 | 420 | 1.76e-30 | 123 |
Msa0418190 | AT4G16480.2 | 28.367 | 349 | 222 | 8 | 36 | 374 | 38 | 368 | 3.93e-30 | 124 |
Msa0418190 | AT4G16480.3 | 28.367 | 349 | 222 | 8 | 36 | 374 | 38 | 368 | 3.93e-30 | 124 |
Msa0418190 | AT4G16480.1 | 28.367 | 349 | 222 | 8 | 36 | 374 | 38 | 368 | 3.93e-30 | 124 |
Msa0418190 | AT1G67300.2 | 25.103 | 486 | 326 | 10 | 7 | 487 | 36 | 488 | 2.08e-29 | 121 |
Msa0418190 | AT1G67300.1 | 25.709 | 494 | 312 | 13 | 7 | 487 | 36 | 487 | 1.01e-28 | 119 |
Msa0418190 | AT1G67300.3 | 25.709 | 494 | 312 | 13 | 7 | 487 | 36 | 487 | 1.01e-28 | 119 |
Msa0418190 | AT1G67300.6 | 25.740 | 439 | 276 | 11 | 7 | 435 | 36 | 434 | 1.14e-27 | 115 |
Msa0418190 | AT1G67300.7 | 25.740 | 439 | 276 | 11 | 7 | 435 | 36 | 434 | 1.14e-27 | 115 |
Msa0418190 | AT1G54730.4 | 23.913 | 414 | 263 | 7 | 31 | 444 | 38 | 399 | 7.02e-27 | 113 |
Msa0418190 | AT1G79820.4 | 25.000 | 412 | 268 | 13 | 30 | 435 | 59 | 435 | 7.33e-27 | 113 |
Msa0418190 | AT3G20460.1 | 23.291 | 395 | 291 | 5 | 92 | 486 | 101 | 483 | 6.29e-26 | 111 |
Msa0418190 | AT1G67300.4 | 25.576 | 434 | 273 | 11 | 7 | 430 | 36 | 429 | 1.23e-25 | 109 |
Msa0418190 | AT1G67300.5 | 25.576 | 434 | 273 | 11 | 7 | 430 | 36 | 429 | 1.23e-25 | 109 |
Msa0418190 | AT1G54730.9 | 24.051 | 395 | 265 | 7 | 31 | 423 | 38 | 399 | 7.66e-24 | 103 |
Msa0418190 | AT1G54730.7 | 24.051 | 395 | 265 | 7 | 31 | 423 | 38 | 399 | 7.66e-24 | 103 |
Msa0418190 | AT1G08920.1 | 21.728 | 405 | 301 | 5 | 84 | 486 | 72 | 462 | 1.14e-23 | 104 |
Msa0418190 | AT2G35740.1 | 25.439 | 342 | 225 | 8 | 36 | 365 | 37 | 360 | 1.26e-23 | 104 |
Msa0418190 | AT5G27360.4 | 21.182 | 406 | 283 | 7 | 20 | 422 | 30 | 401 | 1.45e-23 | 103 |
Msa0418190 | AT2G48020.4 | 25.338 | 296 | 211 | 4 | 84 | 377 | 68 | 355 | 2.92e-23 | 102 |
Msa0418190 | AT1G08920.2 | 20.936 | 406 | 310 | 4 | 84 | 486 | 72 | 469 | 3.08e-23 | 103 |
Msa0418190 | AT3G05155.2 | 23.630 | 292 | 210 | 4 | 64 | 353 | 45 | 325 | 2.01e-22 | 98.6 |
Msa0418190 | AT5G17010.2 | 24.370 | 476 | 247 | 13 | 33 | 486 | 52 | 436 | 2.04e-22 | 100 |
Msa0418190 | AT1G54730.11 | 24.768 | 323 | 216 | 5 | 31 | 353 | 38 | 333 | 3.83e-22 | 97.8 |
Msa0418190 | AT2G48020.3 | 25.185 | 270 | 194 | 3 | 84 | 353 | 68 | 329 | 5.42e-22 | 97.8 |
Msa0418190 | AT1G54730.10 | 24.667 | 300 | 202 | 4 | 31 | 330 | 38 | 313 | 2.27e-21 | 95.5 |
Msa0418190 | AT1G54730.6 | 24.667 | 300 | 202 | 4 | 31 | 330 | 38 | 313 | 2.27e-21 | 95.5 |
Msa0418190 | AT3G51490.1 | 29.528 | 254 | 155 | 9 | 24 | 273 | 3 | 236 | 1.18e-20 | 96.3 |
Msa0418190 | AT1G54730.8 | 24.333 | 300 | 203 | 4 | 31 | 330 | 38 | 313 | 1.28e-20 | 94.4 |
Msa0418190 | AT3G51490.2 | 29.528 | 254 | 155 | 9 | 24 | 273 | 3 | 236 | 1.31e-20 | 95.9 |
Msa0418190 | AT3G51490.2 | 25.847 | 236 | 156 | 6 | 260 | 483 | 486 | 714 | 4.20e-12 | 69.3 |
Msa0418190 | AT1G79820.3 | 22.796 | 465 | 269 | 14 | 30 | 487 | 59 | 440 | 6.37e-20 | 92.8 |
Msa0418190 | AT1G08920.3 | 21.680 | 369 | 261 | 6 | 84 | 438 | 72 | 426 | 1.19e-19 | 92.0 |
Msa0418190 | AT3G51490.3 | 31.548 | 168 | 110 | 5 | 109 | 273 | 21 | 186 | 2.07e-19 | 92.0 |
Msa0418190 | AT3G51490.3 | 25.847 | 236 | 156 | 6 | 260 | 483 | 436 | 664 | 3.69e-12 | 69.3 |
Msa0418190 | AT4G35300.9 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 4.72e-17 | 84.7 |
Msa0418190 | AT4G35300.9 | 26.977 | 215 | 129 | 6 | 285 | 483 | 508 | 710 | 1.62e-11 | 67.4 |
Msa0418190 | AT4G35300.2 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 4.72e-17 | 84.7 |
Msa0418190 | AT4G35300.2 | 26.977 | 215 | 129 | 6 | 285 | 483 | 508 | 710 | 1.62e-11 | 67.4 |
Msa0418190 | AT4G35300.3 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 4.72e-17 | 84.7 |
Msa0418190 | AT4G35300.3 | 26.977 | 215 | 129 | 6 | 285 | 483 | 508 | 710 | 1.62e-11 | 67.4 |
Msa0418190 | AT4G35300.4 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.4 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT4G35300.8 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.8 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT4G35300.6 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.6 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT4G35300.11 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.11 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT4G35300.1 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.1 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT4G35300.10 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.10 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT4G35300.7 | 33.136 | 169 | 108 | 5 | 108 | 273 | 70 | 236 | 5.30e-17 | 84.7 |
Msa0418190 | AT4G35300.7 | 26.977 | 215 | 129 | 6 | 285 | 483 | 518 | 720 | 1.66e-11 | 67.4 |
Msa0418190 | AT1G79820.5 | 23.098 | 368 | 210 | 10 | 127 | 487 | 77 | 378 | 1.28e-16 | 82.0 |
Msa0418190 | AT1G20840.2 | 29.717 | 212 | 137 | 6 | 77 | 278 | 30 | 239 | 2.14e-16 | 82.8 |
Msa0418190 | AT1G20840.1 | 29.717 | 212 | 137 | 6 | 77 | 278 | 30 | 239 | 2.14e-16 | 82.8 |
Msa0418190 | AT4G35300.5 | 26.977 | 215 | 129 | 6 | 285 | 483 | 321 | 523 | 1.52e-11 | 67.0 |
Find 111 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAAGATTCTTGTTCGTTAC+TGG | 0.128057 | 3_2:+65831707 | Msa0418190:CDS |
CCCTGTAACTTGTTGGAAAA+AGG | 0.149049 | 3_2:-65831540 | None:intergenic |
CTCAAAGCGCCTCGCCATTT+TGG | 0.167493 | 3_2:-65831158 | None:intergenic |
TAATTAAGAACCTCTATATT+TGG | 0.172485 | 3_2:+65828981 | Msa0418190:five_prime_UTR |
CCTAACCTCTTTAGATCTTT+AGG | 0.188314 | 3_2:+65831587 | Msa0418190:CDS |
CAAGTTACTGCTACCAATTT+TGG | 0.197138 | 3_2:+65829037 | Msa0418190:CDS |
CCTTTAAAACCATATTAAAA+AGG | 0.205010 | 3_2:+65831480 | Msa0418190:CDS |
GAACCTCTATATTTGGAAAA+TGG | 0.211269 | 3_2:+65828988 | Msa0418190:exon |
TGTTTCTATGCTGCGGGTTT+TGG | 0.214772 | 3_2:+65832376 | Msa0418190:CDS |
GGATATGACATCGGAATTTC+AGG | 0.222818 | 3_2:+65829124 | Msa0418190:CDS |
ATCTTGGGTCGTGTTCTTCT+TGG | 0.226529 | 3_2:+65829528 | Msa0418190:CDS |
TCCAGTGCTTCTTATATTTA+CGG | 0.253516 | 3_2:-65832446 | None:intergenic |
TGTTAGTTTGCCACCAAAAT+TGG | 0.286869 | 3_2:-65829050 | None:intergenic |
CTCTTTAGATCTTTAGGTTT+GGG | 0.298390 | 3_2:+65831593 | Msa0418190:CDS |
ATCAAAAGGCAATGCAATAT+TGG | 0.299239 | 3_2:+65832339 | Msa0418190:CDS |
CGTTTATCCCTGTAACTTGT+TGG | 0.300744 | 3_2:-65831547 | None:intergenic |
AAATATTCCTATGCTTATCT+TGG | 0.307587 | 3_2:+65829512 | Msa0418190:CDS |
GGAGTTGGTATAATCTTTGC+AGG | 0.317632 | 3_2:+65831203 | Msa0418190:CDS |
CCAGTGCTTCTTATATTTAC+GGG | 0.327384 | 3_2:-65832445 | None:intergenic |
TTACTTTCTGCCATTCTACT+TGG | 0.330088 | 3_2:+65831629 | Msa0418190:CDS |
GGTGGTATTGTCTTCCTTGC+TGG | 0.336236 | 3_2:+65829465 | Msa0418190:CDS |
TATGGGGTAAACATTGGTTT+TGG | 0.345672 | 3_2:+65832656 | Msa0418190:CDS |
AGCAAAGCTACGACGATGTT+TGG | 0.348265 | 3_2:+65829420 | Msa0418190:CDS |
CTTGGACTTGCAGTTGTGCC+TGG | 0.348351 | 3_2:+65831275 | Msa0418190:CDS |
CGGAGAAACGTCATCATAAT+AGG | 0.348722 | 3_2:+65829444 | Msa0418190:CDS |
CTGAAGTTGCTCCACCAAAA+TGG | 0.353581 | 3_2:+65831144 | Msa0418190:CDS |
TCTAGTGTTATTGATCGATT+TGG | 0.353688 | 3_2:+65831683 | Msa0418190:CDS |
CCTCTTTAGATCTTTAGGTT+TGG | 0.361445 | 3_2:+65831592 | Msa0418190:CDS |
ATGTTATGCCACTTTAAGTT+CGG | 0.376560 | 3_2:+65832532 | Msa0418190:CDS |
GGTCGTGTTCTTCTTGGGTT+AGG | 0.377383 | 3_2:+65829534 | Msa0418190:CDS |
CTTGCTGGTGGTGCCATTAA+CGG | 0.381192 | 3_2:+65829480 | Msa0418190:CDS |
TGTTATGCCACTTTAAGTTC+GGG | 0.386010 | 3_2:+65832533 | Msa0418190:CDS |
TAGAAAGGCAGCTGGTACTA+AGG | 0.387687 | 3_2:+65829308 | Msa0418190:CDS |
TTTGCAGGTTGCATAAACTA+TGG | 0.389689 | 3_2:+65831218 | Msa0418190:CDS |
TGGAGTCAATGCACATCATA+TGG | 0.390532 | 3_2:+65832638 | Msa0418190:CDS |
GCTGCCTTTCTAAGAATGTC+TGG | 0.398895 | 3_2:-65829297 | None:intergenic |
GGCTGGTGGAGGATTCTCTA+TGG | 0.398898 | 3_2:+65829009 | Msa0418190:CDS |
TCTTGGGTCGTGTTCTTCTT+GGG | 0.403493 | 3_2:+65829529 | Msa0418190:CDS |
GAAGATTCTTGTTCGTTACT+GGG | 0.405890 | 3_2:+65831708 | Msa0418190:CDS |
GCAGTGGTAGCTGGTGTTCA+TGG | 0.409202 | 3_2:+65832304 | Msa0418190:CDS |
CGGTTTGTTAAAGGAGAAGA+TGG | 0.426425 | 3_2:+65832682 | Msa0418190:CDS |
ACATCTTCTCATTATCTAGC+TGG | 0.429977 | 3_2:+65829375 | Msa0418190:CDS |
ATTGTGCTGGCAGTGGTAGC+TGG | 0.430655 | 3_2:+65832295 | Msa0418190:CDS |
AATATTCCTATGCTTATCTT+GGG | 0.434718 | 3_2:+65829513 | Msa0418190:CDS |
CTTCCCAGACATTCTTAGAA+AGG | 0.438106 | 3_2:+65829293 | Msa0418190:CDS |
GGAGACTAAAGGAATTGCTT+TGG | 0.447213 | 3_2:+65832618 | Msa0418190:CDS |
CCTAAAGATCTAAAGAGGTT+AGG | 0.450908 | 3_2:-65831587 | None:intergenic |
ACCACGTTCGACTAAGCTGT+TGG | 0.460799 | 3_2:-65831339 | None:intergenic |
TAACTCAGGTTGAATATCAA+TGG | 0.460980 | 3_2:-65831408 | None:intergenic |
TGTTGCTGTGCATTTCATAA+TGG | 0.463293 | 3_2:+65832480 | Msa0418190:CDS |
CTCTATATTTGGAAAATGGC+TGG | 0.465982 | 3_2:+65828992 | Msa0418190:exon |
TTACTATGTTTCTATGCTGC+GGG | 0.466765 | 3_2:+65832370 | Msa0418190:CDS |
GTTCTTCTTGGGTTAGGTGT+CGG | 0.469199 | 3_2:+65829540 | Msa0418190:CDS |
GGAGTCAATGCACATCATAT+GGG | 0.483226 | 3_2:+65832639 | Msa0418190:CDS |
TCTCCATCCCCATGTGTGCT+TGG | 0.484108 | 3_2:-65831246 | None:intergenic |
CCCGTAAATATAAGAAGCAC+TGG | 0.502898 | 3_2:+65832445 | Msa0418190:CDS |
TTTAACAACTCCAAGTAGAA+TGG | 0.503093 | 3_2:-65831639 | None:intergenic |
AAAGCAATTCCTTTAGTCTC+CGG | 0.505065 | 3_2:-65832616 | None:intergenic |
TATTATCATGTCTATATGCT+TGG | 0.508798 | 3_2:+65831733 | Msa0418190:CDS |
TTAATAAGTTCTTCTAACTC+AGG | 0.509188 | 3_2:-65831422 | None:intergenic |
GGTACAAATGACATATCAAA+AGG | 0.512295 | 3_2:+65832325 | Msa0418190:CDS |
TGTTGGGCGTGTCAGTTATG+AGG | 0.512619 | 3_2:-65831322 | None:intergenic |
TTTACTATGTTTCTATGCTG+CGG | 0.515334 | 3_2:+65832369 | Msa0418190:CDS |
CCACGTTCGACTAAGCTGTT+GGG | 0.516815 | 3_2:-65831338 | None:intergenic |
ACTGGATGCAGCAACTATGC+AGG | 0.518672 | 3_2:-65829089 | None:intergenic |
TGGGGATGGAGACTATCTCT+TGG | 0.519663 | 3_2:+65831257 | Msa0418190:CDS |
AAAATGCCCCGAACTTAAAG+TGG | 0.523444 | 3_2:-65832540 | None:intergenic |
CCAAACCTAAAGATCTAAAG+AGG | 0.525169 | 3_2:-65831592 | None:intergenic |
ATTTGGAAAATGGCTGGTGG+AGG | 0.530401 | 3_2:+65828998 | Msa0418190:exon |
AAGATTCTTGTTCGTTACTG+GGG | 0.542844 | 3_2:+65831709 | Msa0418190:CDS |
TGGATTTGTGTCGTCACTTG+TGG | 0.544283 | 3_2:+65829395 | Msa0418190:CDS |
ATGGCACTGCCAAGCACACA+TGG | 0.546307 | 3_2:+65831237 | Msa0418190:CDS |
TTGGTGGAGCAACTTCAGAT+AGG | 0.546521 | 3_2:-65831139 | None:intergenic |
CCTGGAGCTGTAATTACCAT+TGG | 0.547596 | 3_2:+65831293 | Msa0418190:CDS |
TGCATAGTTGCTGCATCCAG+TGG | 0.549828 | 3_2:+65829091 | Msa0418190:CDS |
AAGGGAATATAGACCTCAGT+TGG | 0.552633 | 3_2:+65831499 | Msa0418190:CDS |
CTGCCAAGCACACATGGGGA+TGG | 0.554164 | 3_2:+65831243 | Msa0418190:CDS |
GCTTGCGGTGTCCATTGTGC+TGG | 0.554774 | 3_2:+65832282 | Msa0418190:intron |
CCAATGGTAATTACAGCTCC+AGG | 0.559410 | 3_2:-65831293 | None:intergenic |
GTTAAAGGAGAAGATGGAGA+AGG | 0.565819 | 3_2:+65832688 | Msa0418190:CDS |
ACATCATATGGGGTAAACAT+TGG | 0.571808 | 3_2:+65832650 | Msa0418190:CDS |
GACATTCTTAGAAAGGCAGC+TGG | 0.576083 | 3_2:+65829300 | Msa0418190:CDS |
CTGCCTTTCTAAGAATGTCT+GGG | 0.579026 | 3_2:-65829296 | None:intergenic |
AGATTCTTGTTCGTTACTGG+GGG | 0.587355 | 3_2:+65831710 | Msa0418190:CDS |
GGTATTGTCTTCCTTGCTGG+TGG | 0.587453 | 3_2:+65829468 | Msa0418190:CDS |
GTTATGCCACTTTAAGTTCG+GGG | 0.589545 | 3_2:+65832534 | Msa0418190:CDS |
CTGGAATTAGCCATGCTAGA+GGG | 0.590701 | 3_2:-65832411 | None:intergenic |
AAGCTACGACGATGTTTGGT+CGG | 0.592316 | 3_2:+65829424 | Msa0418190:CDS |
ACACGACCCAAGATAAGCAT+AGG | 0.599269 | 3_2:-65829519 | None:intergenic |
AGTTATGAGGAAGGCACCAA+TGG | 0.602973 | 3_2:-65831309 | None:intergenic |
ATATAGACCTCAGTTGGTGA+TGG | 0.608654 | 3_2:+65831505 | Msa0418190:CDS |
TATCATGGAGCCCTCTAGCA+TGG | 0.611303 | 3_2:+65832401 | Msa0418190:CDS |
GGTGTCCATTGTGCTGGCAG+TGG | 0.616794 | 3_2:+65832288 | Msa0418190:CDS |
TGGCACTGCCAAGCACACAT+GGG | 0.622519 | 3_2:+65831238 | Msa0418190:CDS |
AAAGCATTACATAAAATCAG+AGG | 0.624019 | 3_2:+65831380 | Msa0418190:CDS |
GGGCGTGTCAGTTATGAGGA+AGG | 0.625101 | 3_2:-65831318 | None:intergenic |
GCAAATGCCATCACCAACTG+AGG | 0.625744 | 3_2:-65831512 | None:intergenic |
CGTTAATGGCACCACCAGCA+AGG | 0.629715 | 3_2:-65829479 | None:intergenic |
TATATTTGGAAAATGGCTGG+TGG | 0.630651 | 3_2:+65828995 | Msa0418190:exon |
CTCAGGTTGAATATCAATGG+AGG | 0.632300 | 3_2:-65831405 | None:intergenic |
AGCTACCACTGCCAGCACAA+TGG | 0.639024 | 3_2:-65832293 | None:intergenic |
GAGTCAATGCACATCATATG+GGG | 0.640900 | 3_2:+65832640 | Msa0418190:CDS |
CAATAACACTAGAAGAGATG+AGG | 0.641663 | 3_2:-65831673 | None:intergenic |
GGCACTGCCAAGCACACATG+GGG | 0.646594 | 3_2:+65831239 | Msa0418190:CDS |
GCTGGTGGTGCCATTAACGG+AGG | 0.647650 | 3_2:+65829483 | Msa0418190:CDS |
GCAACTTCAGATAGGTACAA+TGG | 0.649314 | 3_2:-65831131 | None:intergenic |
CCCAACAGCTTAGTCGAACG+TGG | 0.653506 | 3_2:+65831338 | Msa0418190:CDS |
AGAAACGTCATCATAATAGG+TGG | 0.664664 | 3_2:+65829447 | Msa0418190:CDS |
GTTGCTCCACCAAAATGGCG+AGG | 0.676475 | 3_2:+65831149 | Msa0418190:CDS |
TTTAAGAAATGGCTTCATGG+TGG | 0.679695 | 3_2:-65829265 | None:intergenic |
GCTGGAATTAGCCATGCTAG+AGG | 0.694505 | 3_2:-65832412 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATAAATAAGAGTATATAT+AGG | - | chr3_2:65829729-65829748 | None:intergenic | 10.0% |
!! | TTAAAAAAACAAGATTAAAT+AGG | - | chr3_2:65829833-65829852 | None:intergenic | 10.0% |
!!! | TTAAATCTAAACTTTAAAAT+AGG | + | chr3_2:65829929-65829948 | Msa0418190:intron | 10.0% |
!!! | TAAATCTAAACTTTAAAATA+GGG | + | chr3_2:65829930-65829949 | Msa0418190:intron | 10.0% |
!! | AAACAAAAAAATTCTCAAAA+GGG | - | chr3_2:65829654-65829673 | None:intergenic | 15.0% |
!! | AAAACAAAAAAATTCTCAAA+AGG | - | chr3_2:65829655-65829674 | None:intergenic | 15.0% |
!!! | TGATTTTTTGCTTATATTAT+GGG | - | chr3_2:65829764-65829783 | None:intergenic | 15.0% |
!!! | ATGATTTTTTGCTTATATTA+TGG | - | chr3_2:65829765-65829784 | None:intergenic | 15.0% |
!! | AAAAAATAAGATTAAATCTG+AGG | - | chr3_2:65829868-65829887 | None:intergenic | 15.0% |
!!! | TTTTATCCTTAAAATTTGAT+GGG | + | chr3_2:65829894-65829913 | Msa0418190:intron | 15.0% |
!!! | TTTTTTTTGACAGATTAAAT+AGG | - | chr3_2:65830092-65830111 | None:intergenic | 15.0% |
!! | AATCTGTCAAAAAAAAAATA+AGG | + | chr3_2:65830096-65830115 | Msa0418190:intron | 15.0% |
!!! | TTATAGTCAAATTTGTTTAA+TGG | - | chr3_2:65830413-65830432 | None:intergenic | 15.0% |
!! | AATATTGTTCATAGTTTATA+TGG | + | chr3_2:65830612-65830631 | Msa0418190:intron | 15.0% |
!! | TAATAAAAAAAGCAGAAAAA+CGG | + | chr3_2:65830642-65830661 | Msa0418190:intron | 15.0% |
!! | AAAAACCATAAAAAGATAAA+AGG | + | chr3_2:65830905-65830924 | Msa0418190:intron | 15.0% |
!!! | AATTTCCTTTTATCTTTTTA+TGG | - | chr3_2:65830913-65830932 | None:intergenic | 15.0% |
!!! | TAATAAACTTTTTTTAAGGA+GGG | - | chr3_2:65830998-65831017 | None:intergenic | 15.0% |
!!! | ATAATAAACTTTTTTTAAGG+AGG | - | chr3_2:65830999-65831018 | None:intergenic | 15.0% |
!!! | GGAATAATAAACTTTTTTTA+AGG | - | chr3_2:65831002-65831021 | None:intergenic | 15.0% |
!! | AATATGTCATCAAAATTTAT+CGG | - | chr3_2:65831092-65831111 | None:intergenic | 15.0% |
!!! | CTTTTTAATATGGTTTTAAA+GGG | - | chr3_2:65831482-65831501 | None:intergenic | 15.0% |
!!! | CTTTAAAACCATATTAAAAA+GGG | + | chr3_2:65831481-65831500 | Msa0418190:CDS | 15.0% |
!! | GAAAATTTATATCAATGAAA+GGG | - | chr3_2:65832053-65832072 | None:intergenic | 15.0% |
!! | TGAAAATTTATATCAATGAA+AGG | - | chr3_2:65832054-65832073 | None:intergenic | 15.0% |
!!! | CAATTATTCTTTTATTTTCA+TGG | + | chr3_2:65832072-65832091 | Msa0418190:intron | 15.0% |
!!! | ATTTTTAATAATTGTGAAAG+TGG | + | chr3_2:65832153-65832172 | Msa0418190:intron | 15.0% |
!! | TAATTAAGAACCTCTATATT+TGG | + | chr3_2:65828981-65829000 | Msa0418190:five_prime_UTR | 20.0% |
!! | TGAAATTAATGTCAAATTTC+AGG | + | chr3_2:65829234-65829253 | Msa0418190:intron | 20.0% |
!!! | CAATGGGTTTTAAATAAATT+TGG | + | chr3_2:65829582-65829601 | Msa0418190:intron | 20.0% |
!!! | GTCTTTTTTGCTTATATTTT+GGG | - | chr3_2:65829800-65829819 | None:intergenic | 20.0% |
!!! | TGTCTTTTTTGCTTATATTT+TGG | - | chr3_2:65829801-65829820 | None:intergenic | 20.0% |
!!! | CTTTTATCCTTAAAATTTGA+TGG | + | chr3_2:65829893-65829912 | Msa0418190:intron | 20.0% |
!!! | GTACTTATAACTTTAAAAAC+TGG | + | chr3_2:65829952-65829971 | Msa0418190:intron | 20.0% |
!!! | TGACAGATTAAAAGTTTTTA+AGG | - | chr3_2:65830024-65830043 | None:intergenic | 20.0% |
!!! | CTATAAGAATGTTATTTTGT+TGG | + | chr3_2:65830427-65830446 | Msa0418190:intron | 20.0% |
!!! | AAACTCTAGTTTAAGTATAA+AGG | + | chr3_2:65830682-65830701 | Msa0418190:intron | 20.0% |
!! | TATAATAGAATGTGATGTTT+AGG | + | chr3_2:65830708-65830727 | Msa0418190:intron | 20.0% |
!! | TATTCGCAAATTTATTTATG+TGG | + | chr3_2:65830827-65830846 | Msa0418190:intron | 20.0% |
!!! | AATAAACTTTTTTTAAGGAG+GGG | - | chr3_2:65830997-65831016 | None:intergenic | 20.0% |
!! | ATTATTATTAGGGTTATGAT+AGG | + | chr3_2:65831035-65831054 | Msa0418190:intron | 20.0% |
!! | TTATTATTAGGGTTATGATA+GGG | + | chr3_2:65831036-65831055 | Msa0418190:intron | 20.0% |
!!! | GATTTTATGTAATGCTTTTT+TGG | - | chr3_2:65831378-65831397 | None:intergenic | 20.0% |
!!! | CCTTTTTAATATGGTTTTAA+AGG | - | chr3_2:65831483-65831502 | None:intergenic | 20.0% |
!!! | CCTTTAAAACCATATTAAAA+AGG | + | chr3_2:65831480-65831499 | Msa0418190:CDS | 20.0% |
!!! | TCTATATTCCCTTTTTAATA+TGG | - | chr3_2:65831492-65831511 | None:intergenic | 20.0% |
!! | ATAAAGGAAAATGTAACAAA+TGG | - | chr3_2:65831941-65831960 | None:intergenic | 20.0% |
!!! | TTTCATTATATTTTTCTTGC+CGG | + | chr3_2:65832597-65832616 | Msa0418190:CDS | 20.0% |
! | AATTAATGTCAAATTTCAGG+AGG | + | chr3_2:65829237-65829256 | Msa0418190:intron | 25.0% |
!!! | TTTTTTAAGAAATGGCTTCA+TGG | - | chr3_2:65829271-65829290 | None:intergenic | 25.0% |
!!! | GGGAAGAATTTTTTAAGAAA+TGG | - | chr3_2:65829279-65829298 | None:intergenic | 25.0% |
! | AAATATTCCTATGCTTATCT+TGG | + | chr3_2:65829512-65829531 | Msa0418190:CDS | 25.0% |
! | AATATTCCTATGCTTATCTT+GGG | + | chr3_2:65829513-65829532 | Msa0418190:CDS | 25.0% |
! | ACGATTTCCTAAATTTAGAA+CGG | - | chr3_2:65829616-65829635 | None:intergenic | 25.0% |
! | TTCTAAATTTAGGAAATCGT+TGG | + | chr3_2:65829616-65829635 | Msa0418190:intron | 25.0% |
!! | TTTTTGCTTATATTATGGGA+CGG | - | chr3_2:65829760-65829779 | None:intergenic | 25.0% |
!! | TTTTGACCCATCAAATTTTA+AGG | - | chr3_2:65829903-65829922 | None:intergenic | 25.0% |
! | TACTTAAACTAGAGTTTAGA+CGG | - | chr3_2:65830679-65830698 | None:intergenic | 25.0% |
! | TAGAGTAAAAAGTAGTTGTT+GGG | - | chr3_2:65830809-65830828 | None:intergenic | 25.0% |
! | ATAGAGTAAAAAGTAGTTGT+TGG | - | chr3_2:65830810-65830829 | None:intergenic | 25.0% |
!!! | TTTTGATGACATATTGCAAT+TGG | + | chr3_2:65831097-65831116 | Msa0418190:intron | 25.0% |
!! | AAAGCATTACATAAAATCAG+AGG | + | chr3_2:65831380-65831399 | Msa0418190:CDS | 25.0% |
! | TTAATAAGTTCTTCTAACTC+AGG | - | chr3_2:65831425-65831444 | None:intergenic | 25.0% |
! | TATTATCATGTCTATATGCT+TGG | + | chr3_2:65831733-65831752 | Msa0418190:CDS | 25.0% |
!!! | AATGTATTTAGGGCAATTTT+TGG | - | chr3_2:65831806-65831825 | None:intergenic | 25.0% |
! | CTCCTTAACAAATGTATTTA+GGG | - | chr3_2:65831816-65831835 | None:intergenic | 25.0% |
! | ACTCCTTAACAAATGTATTT+AGG | - | chr3_2:65831817-65831836 | None:intergenic | 25.0% |
! | TCCTTTATAAATACTCTATC+TGG | + | chr3_2:65831953-65831972 | Msa0418190:intron | 25.0% |
!! | TCCAGATAGAGTATTTATAA+AGG | - | chr3_2:65831957-65831976 | None:intergenic | 25.0% |
! | TTTATGATAATCAAGACAAG+AGG | + | chr3_2:65832180-65832199 | Msa0418190:intron | 25.0% |
! | TTATGATAATCAAGACAAGA+GGG | + | chr3_2:65832181-65832200 | Msa0418190:intron | 25.0% |
GAACCTCTATATTTGGAAAA+TGG | + | chr3_2:65828988-65829007 | Msa0418190:exon | 30.0% | |
! | CTTCTTTTTGGATATGACAT+CGG | + | chr3_2:65829115-65829134 | Msa0418190:CDS | 30.0% |
!!! | ATTTTTAGAACCTCCGTTAA+TGG | - | chr3_2:65829496-65829515 | None:intergenic | 30.0% |
TCACTAATCAAGTAAGTCAA+TGG | + | chr3_2:65829565-65829584 | Msa0418190:intron | 30.0% | |
CACTAATCAAGTAAGTCAAT+GGG | + | chr3_2:65829566-65829585 | Msa0418190:intron | 30.0% | |
! | TTCCTAAATTTAGAACGGAT+GGG | - | chr3_2:65829611-65829630 | None:intergenic | 30.0% |
! | TTTCCTAAATTTAGAACGGA+TGG | - | chr3_2:65829612-65829631 | None:intergenic | 30.0% |
! | GAGAGAGAATACATAGTTTT+TGG | + | chr3_2:65830363-65830382 | Msa0418190:intron | 30.0% |
AGGTTATCCTTGAAGAATTA+CGG | + | chr3_2:65830728-65830747 | Msa0418190:intron | 30.0% | |
AAATTACCCGTAATTCTTCA+AGG | - | chr3_2:65830738-65830757 | None:intergenic | 30.0% | |
ACTAATTAAATTAGCCGCAT+TGG | + | chr3_2:65830766-65830785 | Msa0418190:intron | 30.0% | |
TACTCTCAAATTTACCAATG+CGG | - | chr3_2:65830783-65830802 | None:intergenic | 30.0% | |
AAATTAGTCACACTTCTTCA+CGG | + | chr3_2:65830873-65830892 | Msa0418190:intron | 30.0% | |
TGACATATTGCAATTGGAAA+AGG | + | chr3_2:65831103-65831122 | Msa0418190:intron | 30.0% | |
!! | TAACTCAGGTTGAATATCAA+TGG | - | chr3_2:65831411-65831430 | None:intergenic | 30.0% |
! | CTCTTTAGATCTTTAGGTTT+GGG | + | chr3_2:65831593-65831612 | Msa0418190:CDS | 30.0% |
TTTAACAACTCCAAGTAGAA+TGG | - | chr3_2:65831642-65831661 | None:intergenic | 30.0% | |
! | TCTAGTGTTATTGATCGATT+TGG | + | chr3_2:65831683-65831702 | Msa0418190:CDS | 30.0% |
!!! | TATTTAGGGCAATTTTTGGT+AGG | - | chr3_2:65831802-65831821 | None:intergenic | 30.0% |
! | TGCCCTAAATACATTTGTTA+AGG | + | chr3_2:65831811-65831830 | Msa0418190:intron | 30.0% |
!!! | GGAAGTGCAATTGTATTTTT+TGG | + | chr3_2:65831974-65831993 | Msa0418190:intron | 30.0% |
GGTACAAATGACATATCAAA+AGG | + | chr3_2:65832325-65832344 | Msa0418190:CDS | 30.0% | |
ATCAAAAGGCAATGCAATAT+TGG | + | chr3_2:65832339-65832358 | Msa0418190:CDS | 30.0% | |
! | TTTACTATGTTTCTATGCTG+CGG | + | chr3_2:65832369-65832388 | Msa0418190:CDS | 30.0% |
TCCAGTGCTTCTTATATTTA+CGG | - | chr3_2:65832449-65832468 | None:intergenic | 30.0% | |
!! | ATGTTATGCCACTTTAAGTT+CGG | + | chr3_2:65832532-65832551 | Msa0418190:CDS | 30.0% |
!! | ATTTTTGTTCTATGCTGGTT+GGG | + | chr3_2:65832558-65832577 | Msa0418190:CDS | 30.0% |
!!! | GTAAACATTGGTTTTGGTAT+CGG | + | chr3_2:65832662-65832681 | Msa0418190:CDS | 30.0% |
!!! | TTTTGGTATCGGTTTGTTAA+AGG | + | chr3_2:65832673-65832692 | Msa0418190:CDS | 30.0% |
!! | CAGCCATTTTCCAAATATAG+AGG | - | chr3_2:65828994-65829013 | None:intergenic | 35.0% |
CTCTATATTTGGAAAATGGC+TGG | + | chr3_2:65828992-65829011 | Msa0418190:exon | 35.0% | |
TATATTTGGAAAATGGCTGG+TGG | + | chr3_2:65828995-65829014 | Msa0418190:exon | 35.0% | |
! | CAAGTTACTGCTACCAATTT+TGG | + | chr3_2:65829037-65829056 | Msa0418190:CDS | 35.0% |
!! | TGTTAGTTTGCCACCAAAAT+TGG | - | chr3_2:65829053-65829072 | None:intergenic | 35.0% |
CGATGTCATATCCAAAAAGA+AGG | - | chr3_2:65829117-65829136 | None:intergenic | 35.0% | |
TTTAAGAAATGGCTTCATGG+TGG | - | chr3_2:65829268-65829287 | None:intergenic | 35.0% | |
ACATCTTCTCATTATCTAGC+TGG | + | chr3_2:65829375-65829394 | Msa0418190:CDS | 35.0% | |
AGAAACGTCATCATAATAGG+TGG | + | chr3_2:65829447-65829466 | Msa0418190:CDS | 35.0% | |
! | TCCTAAATTTAGAACGGATG+GGG | - | chr3_2:65829610-65829629 | None:intergenic | 35.0% |
AAAAAGCAGAAAAACGGACA+CGG | + | chr3_2:65830648-65830667 | Msa0418190:intron | 35.0% | |
GGTTATCCTTGAAGAATTAC+GGG | + | chr3_2:65830729-65830748 | Msa0418190:intron | 35.0% | |
! | TTATGATAGGGCACTAGTTA+AGG | + | chr3_2:65831048-65831067 | Msa0418190:intron | 35.0% |
! | ACAAGCTTCCCATTCTTTTT+GGG | + | chr3_2:65831182-65831201 | Msa0418190:CDS | 35.0% |
TACCAACTCCCAAAAAGAAT+GGG | - | chr3_2:65831193-65831212 | None:intergenic | 35.0% | |
ATACCAACTCCCAAAAAGAA+TGG | - | chr3_2:65831194-65831213 | None:intergenic | 35.0% | |
TTTGCAGGTTGCATAAACTA+TGG | + | chr3_2:65831218-65831237 | Msa0418190:CDS | 35.0% | |
!! | CTGTAACTTGTTGGAAAAAG+GGG | - | chr3_2:65831541-65831560 | None:intergenic | 35.0% |
!! | CCTGTAACTTGTTGGAAAAA+GGG | - | chr3_2:65831542-65831561 | None:intergenic | 35.0% |
! | CCTTTTTCCAACAAGTTACA+GGG | + | chr3_2:65831540-65831559 | Msa0418190:CDS | 35.0% |
CCTAAAGATCTAAAGAGGTT+AGG | - | chr3_2:65831590-65831609 | None:intergenic | 35.0% | |
CCTAACCTCTTTAGATCTTT+AGG | + | chr3_2:65831587-65831606 | Msa0418190:CDS | 35.0% | |
CCAAACCTAAAGATCTAAAG+AGG | - | chr3_2:65831595-65831614 | None:intergenic | 35.0% | |
! | CCTCTTTAGATCTTTAGGTT+TGG | + | chr3_2:65831592-65831611 | Msa0418190:CDS | 35.0% |
TTACTTTCTGCCATTCTACT+TGG | + | chr3_2:65831629-65831648 | Msa0418190:CDS | 35.0% | |
CAATAACACTAGAAGAGATG+AGG | - | chr3_2:65831676-65831695 | None:intergenic | 35.0% | |
GAAGATTCTTGTTCGTTACT+GGG | + | chr3_2:65831708-65831727 | Msa0418190:CDS | 35.0% | |
AAGATTCTTGTTCGTTACTG+GGG | + | chr3_2:65831709-65831728 | Msa0418190:CDS | 35.0% | |
! | TTACTATGTTTCTATGCTGC+GGG | + | chr3_2:65832370-65832389 | Msa0418190:CDS | 35.0% |
CCAGTGCTTCTTATATTTAC+GGG | - | chr3_2:65832448-65832467 | None:intergenic | 35.0% | |
TGTTGCTGTGCATTTCATAA+TGG | + | chr3_2:65832480-65832499 | Msa0418190:CDS | 35.0% | |
!! | TGTTATGCCACTTTAAGTTC+GGG | + | chr3_2:65832533-65832552 | Msa0418190:CDS | 35.0% |
! | CATTTTTGTTCTATGCTGGT+TGG | + | chr3_2:65832557-65832576 | Msa0418190:CDS | 35.0% |
AAAGCAATTCCTTTAGTCTC+CGG | - | chr3_2:65832619-65832638 | None:intergenic | 35.0% | |
ACATCATATGGGGTAAACAT+TGG | + | chr3_2:65832650-65832669 | Msa0418190:CDS | 35.0% | |
!!! | TATGGGGTAAACATTGGTTT+TGG | + | chr3_2:65832656-65832675 | Msa0418190:CDS | 35.0% |
! | GTTACTGCTACCAATTTTGG+TGG | + | chr3_2:65829040-65829059 | Msa0418190:CDS | 40.0% |
ATATCCAAAAAGAAGGCCAC+TGG | - | chr3_2:65829110-65829129 | None:intergenic | 40.0% | |
GGATATGACATCGGAATTTC+AGG | + | chr3_2:65829124-65829143 | Msa0418190:CDS | 40.0% | |
CTTCCCAGACATTCTTAGAA+AGG | + | chr3_2:65829293-65829312 | Msa0418190:CDS | 40.0% | |
! | CTGCCTTTCTAAGAATGTCT+GGG | - | chr3_2:65829299-65829318 | None:intergenic | 40.0% |
CGGAGAAACGTCATCATAAT+AGG | + | chr3_2:65829444-65829463 | Msa0418190:CDS | 40.0% | |
! | ACCCCATCCGTTCTAAATTT+AGG | + | chr3_2:65829606-65829625 | Msa0418190:intron | 40.0% |
TGCTTATATTATGGGACGGA+GGG | - | chr3_2:65829756-65829775 | None:intergenic | 40.0% | |
TTGCTTATATTATGGGACGG+AGG | - | chr3_2:65829757-65829776 | None:intergenic | 40.0% | |
GCAACTTCAGATAGGTACAA+TGG | - | chr3_2:65831134-65831153 | None:intergenic | 40.0% | |
! | CACAAGCTTCCCATTCTTTT+TGG | + | chr3_2:65831181-65831200 | Msa0418190:CDS | 40.0% |
!! | TTCCCATTCTTTTTGGGAGT+TGG | + | chr3_2:65831188-65831207 | Msa0418190:CDS | 40.0% |
!! | GGAGTTGGTATAATCTTTGC+AGG | + | chr3_2:65831203-65831222 | Msa0418190:CDS | 40.0% |
!! | CTCAGGTTGAATATCAATGG+AGG | - | chr3_2:65831408-65831427 | None:intergenic | 40.0% |
AAGGGAATATAGACCTCAGT+TGG | + | chr3_2:65831499-65831518 | Msa0418190:CDS | 40.0% | |
!! | ATATAGACCTCAGTTGGTGA+TGG | + | chr3_2:65831505-65831524 | Msa0418190:CDS | 40.0% |
! | CCCTTTTTCCAACAAGTTAC+AGG | + | chr3_2:65831539-65831558 | Msa0418190:CDS | 40.0% |
!! | CCCTGTAACTTGTTGGAAAA+AGG | - | chr3_2:65831543-65831562 | None:intergenic | 40.0% |
! | CGTTTATCCCTGTAACTTGT+TGG | - | chr3_2:65831550-65831569 | None:intergenic | 40.0% |
CGAAGATTCTTGTTCGTTAC+TGG | + | chr3_2:65831707-65831726 | Msa0418190:CDS | 40.0% | |
AGATTCTTGTTCGTTACTGG+GGG | + | chr3_2:65831710-65831729 | Msa0418190:CDS | 40.0% | |
TATGAACACCATGAAGCTTG+CGG | + | chr3_2:65832267-65832286 | Msa0418190:intron | 40.0% | |
TTTACGGGAAAAATCTCAGC+TGG | - | chr3_2:65832433-65832452 | None:intergenic | 40.0% | |
! | CCCGTAAATATAAGAAGCAC+TGG | + | chr3_2:65832445-65832464 | Msa0418190:CDS | 40.0% |
!! | GTTATGCCACTTTAAGTTCG+GGG | + | chr3_2:65832534-65832553 | Msa0418190:CDS | 40.0% |
AAAATGCCCCGAACTTAAAG+TGG | - | chr3_2:65832543-65832562 | None:intergenic | 40.0% | |
! | TTTTTCTTGCCGGAGACTAA+AGG | + | chr3_2:65832607-65832626 | Msa0418190:CDS | 40.0% |
GGAGACTAAAGGAATTGCTT+TGG | + | chr3_2:65832618-65832637 | Msa0418190:CDS | 40.0% | |
TGGAGTCAATGCACATCATA+TGG | + | chr3_2:65832638-65832657 | Msa0418190:CDS | 40.0% | |
GGAGTCAATGCACATCATAT+GGG | + | chr3_2:65832639-65832658 | Msa0418190:CDS | 40.0% | |
GAGTCAATGCACATCATATG+GGG | + | chr3_2:65832640-65832659 | Msa0418190:CDS | 40.0% | |
!! | CGGTTTGTTAAAGGAGAAGA+TGG | + | chr3_2:65832682-65832701 | Msa0418190:CDS | 40.0% |
GTTAAAGGAGAAGATGGAGA+AGG | + | chr3_2:65832688-65832707 | Msa0418190:CDS | 40.0% | |
ATTTGGAAAATGGCTGGTGG+AGG | + | chr3_2:65828998-65829017 | Msa0418190:exon | 45.0% | |
! | GCTGCCTTTCTAAGAATGTC+TGG | - | chr3_2:65829300-65829319 | None:intergenic | 45.0% |
GACATTCTTAGAAAGGCAGC+TGG | + | chr3_2:65829300-65829319 | Msa0418190:CDS | 45.0% | |
TAGAAAGGCAGCTGGTACTA+AGG | + | chr3_2:65829308-65829327 | Msa0418190:CDS | 45.0% | |
TGGATTTGTGTCGTCACTTG+TGG | + | chr3_2:65829395-65829414 | Msa0418190:CDS | 45.0% | |
AGCAAAGCTACGACGATGTT+TGG | + | chr3_2:65829420-65829439 | Msa0418190:CDS | 45.0% | |
AAGCTACGACGATGTTTGGT+CGG | + | chr3_2:65829424-65829443 | Msa0418190:CDS | 45.0% | |
ACACGACCCAAGATAAGCAT+AGG | - | chr3_2:65829522-65829541 | None:intergenic | 45.0% | |
ATCTTGGGTCGTGTTCTTCT+TGG | + | chr3_2:65829528-65829547 | Msa0418190:CDS | 45.0% | |
TCTTGGGTCGTGTTCTTCTT+GGG | + | chr3_2:65829529-65829548 | Msa0418190:CDS | 45.0% | |
! | GTTCTTCTTGGGTTAGGTGT+CGG | + | chr3_2:65829540-65829559 | Msa0418190:CDS | 45.0% |
TTGGTGGAGCAACTTCAGAT+AGG | - | chr3_2:65831142-65831161 | None:intergenic | 45.0% | |
CTGAAGTTGCTCCACCAAAA+TGG | + | chr3_2:65831144-65831163 | Msa0418190:CDS | 45.0% | |
CCAATGGTAATTACAGCTCC+AGG | - | chr3_2:65831296-65831315 | None:intergenic | 45.0% | |
CCTGGAGCTGTAATTACCAT+TGG | + | chr3_2:65831293-65831312 | Msa0418190:CDS | 45.0% | |
!! | AGTTATGAGGAAGGCACCAA+TGG | - | chr3_2:65831312-65831331 | None:intergenic | 45.0% |
!! | TGTTTCTATGCTGCGGGTTT+TGG | + | chr3_2:65832376-65832395 | Msa0418190:CDS | 45.0% |
!!! | CTGCGGGTTTTGGTTTATCA+TGG | + | chr3_2:65832386-65832405 | Msa0418190:CDS | 45.0% |
CTGGAATTAGCCATGCTAGA+GGG | - | chr3_2:65832414-65832433 | None:intergenic | 45.0% | |
!! | GGGGCATTTTTGTTCTATGC+TGG | + | chr3_2:65832553-65832572 | Msa0418190:CDS | 45.0% |
!! | AAAGAAATAATTAATATAAT+TGG | - | chr3_2:65829705-65829724 | None:intergenic | 5.0% |
!! | ATAATAATACAATAATTATA+AGG | - | chr3_2:65831023-65831042 | None:intergenic | 5.0% |
!! | ATAATTATTGTATTATTATT+AGG | + | chr3_2:65831024-65831043 | Msa0418190:intron | 5.0% |
!! | TAATTATTGTATTATTATTA+GGG | + | chr3_2:65831025-65831044 | Msa0418190:intron | 5.0% |
ACTGGATGCAGCAACTATGC+AGG | - | chr3_2:65829092-65829111 | None:intergenic | 50.0% | |
TGCATAGTTGCTGCATCCAG+TGG | + | chr3_2:65829091-65829110 | Msa0418190:CDS | 50.0% | |
! | GCATCCAGTGGCCTTCTTTT+TGG | + | chr3_2:65829103-65829122 | Msa0418190:CDS | 50.0% |
GGTGGTATTGTCTTCCTTGC+TGG | + | chr3_2:65829465-65829484 | Msa0418190:CDS | 50.0% | |
GGTATTGTCTTCCTTGCTGG+TGG | + | chr3_2:65829468-65829487 | Msa0418190:CDS | 50.0% | |
!! | CTTGCTGGTGGTGCCATTAA+CGG | + | chr3_2:65829480-65829499 | Msa0418190:CDS | 50.0% |
GGTCGTGTTCTTCTTGGGTT+AGG | + | chr3_2:65829534-65829553 | Msa0418190:CDS | 50.0% | |
TGGGGATGGAGACTATCTCT+TGG | + | chr3_2:65831257-65831276 | Msa0418190:CDS | 50.0% | |
TGTTGGGCGTGTCAGTTATG+AGG | - | chr3_2:65831325-65831344 | None:intergenic | 50.0% | |
CCACGTTCGACTAAGCTGTT+GGG | - | chr3_2:65831341-65831360 | None:intergenic | 50.0% | |
ACCACGTTCGACTAAGCTGT+TGG | - | chr3_2:65831342-65831361 | None:intergenic | 50.0% | |
GCAAATGCCATCACCAACTG+AGG | - | chr3_2:65831515-65831534 | None:intergenic | 50.0% | |
AATGGACACCGCAAGCTTCA+TGG | - | chr3_2:65832278-65832297 | None:intergenic | 50.0% | |
TATCATGGAGCCCTCTAGCA+TGG | + | chr3_2:65832401-65832420 | Msa0418190:CDS | 50.0% | |
GCTGGAATTAGCCATGCTAG+AGG | - | chr3_2:65832415-65832434 | None:intergenic | 50.0% | |
GGCTGGTGGAGGATTCTCTA+TGG | + | chr3_2:65829009-65829028 | Msa0418190:CDS | 55.0% | |
CGTTAATGGCACCACCAGCA+AGG | - | chr3_2:65829482-65829501 | None:intergenic | 55.0% | |
GTTGCTCCACCAAAATGGCG+AGG | + | chr3_2:65831149-65831168 | Msa0418190:CDS | 55.0% | |
!! | AAAGCGCCTCGCCATTTTGG+TGG | - | chr3_2:65831158-65831177 | None:intergenic | 55.0% |
!! | CTCAAAGCGCCTCGCCATTT+TGG | - | chr3_2:65831161-65831180 | None:intergenic | 55.0% |
ATGGCACTGCCAAGCACACA+TGG | + | chr3_2:65831237-65831256 | Msa0418190:CDS | 55.0% | |
TGGCACTGCCAAGCACACAT+GGG | + | chr3_2:65831238-65831257 | Msa0418190:CDS | 55.0% | |
TCTCCATCCCCATGTGTGCT+TGG | - | chr3_2:65831249-65831268 | None:intergenic | 55.0% | |
CTTGGACTTGCAGTTGTGCC+TGG | + | chr3_2:65831275-65831294 | Msa0418190:CDS | 55.0% | |
GGGCGTGTCAGTTATGAGGA+AGG | - | chr3_2:65831321-65831340 | None:intergenic | 55.0% | |
CCCAACAGCTTAGTCGAACG+TGG | + | chr3_2:65831338-65831357 | Msa0418190:CDS | 55.0% | |
AGCTACCACTGCCAGCACAA+TGG | - | chr3_2:65832296-65832315 | None:intergenic | 55.0% | |
! | ATTGTGCTGGCAGTGGTAGC+TGG | + | chr3_2:65832295-65832314 | Msa0418190:CDS | 55.0% |
GCAGTGGTAGCTGGTGTTCA+TGG | + | chr3_2:65832304-65832323 | Msa0418190:CDS | 55.0% | |
!! | GCTGGTGGTGCCATTAACGG+AGG | + | chr3_2:65829483-65829502 | Msa0418190:CDS | 60.0% |
GGCACTGCCAAGCACACATG+GGG | + | chr3_2:65831239-65831258 | Msa0418190:CDS | 60.0% | |
CTGCCAAGCACACATGGGGA+TGG | + | chr3_2:65831243-65831262 | Msa0418190:CDS | 60.0% | |
GCTTGCGGTGTCCATTGTGC+TGG | + | chr3_2:65832282-65832301 | Msa0418190:intron | 60.0% | |
! | GGTGTCCATTGTGCTGGCAG+TGG | + | chr3_2:65832288-65832307 | Msa0418190:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 65828945 | 65832723 | 65828945 | ID=Msa0418190;Name=Msa0418190 |
chr3_2 | mRNA | 65828945 | 65832723 | 65828945 | ID=Msa0418190-mRNA-1;Parent=Msa0418190;Name=Msa0418190-mRNA-1;_AED=0.44;_eAED=0.44;_QI=62|0.66|0.25|1|1|1|4|0|509 |
chr3_2 | exon | 65828945 | 65829145 | 65828945 | ID=Msa0418190-mRNA-1:exon:14886;Parent=Msa0418190-mRNA-1 |
chr3_2 | exon | 65829256 | 65829575 | 65829256 | ID=Msa0418190-mRNA-1:exon:14887;Parent=Msa0418190-mRNA-1 |
chr3_2 | exon | 65831125 | 65831754 | 65831125 | ID=Msa0418190-mRNA-1:exon:14888;Parent=Msa0418190-mRNA-1 |
chr3_2 | exon | 65832283 | 65832723 | 65832283 | ID=Msa0418190-mRNA-1:exon:14889;Parent=Msa0418190-mRNA-1 |
chr3_2 | five_prime_UTR | 65828945 | 65829006 | 65828945 | ID=Msa0418190-mRNA-1:five_prime_utr;Parent=Msa0418190-mRNA-1 |
chr3_2 | CDS | 65829007 | 65829145 | 65829007 | ID=Msa0418190-mRNA-1:cds;Parent=Msa0418190-mRNA-1 |
chr3_2 | CDS | 65829256 | 65829575 | 65829256 | ID=Msa0418190-mRNA-1:cds;Parent=Msa0418190-mRNA-1 |
chr3_2 | CDS | 65831125 | 65831754 | 65831125 | ID=Msa0418190-mRNA-1:cds;Parent=Msa0418190-mRNA-1 |
chr3_2 | CDS | 65832283 | 65832723 | 65832283 | ID=Msa0418190-mRNA-1:cds;Parent=Msa0418190-mRNA-1 |
Gene Sequence |
Protein sequence |