AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1274520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1274520 MtrunA17_Chr8g0340741 98.583 494 7 0 1 494 1 494 0.0 1003
Msa1274520 MtrunA17_Chr8g0389821 73.987 469 120 2 25 492 26 493 0.0 734
Msa1274520 MtrunA17_Chr6g0487071 69.697 462 139 1 32 492 30 491 0.0 679
Msa1274520 MtrunA17_Chr1g0156571 57.395 453 190 3 40 491 42 492 0.0 518
Msa1274520 MtrunA17_Chr5g0396421 56.476 471 192 5 29 489 29 496 8.26e-174 498
Msa1274520 MtrunA17_Chr4g0054541 58.228 158 64 1 227 384 5 160 3.26e-57 187
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1274520 AT2G19860.1 71.457 494 140 1 1 493 1 494 0.0 728
Msa1274520 AT4G29130.1 72.672 494 134 1 1 493 1 494 0.0 728
Msa1274520 AT2G19860.2 72.987 385 103 1 110 493 1 385 0.0 586
Msa1274520 AT1G50460.1 52.008 473 213 6 26 487 26 495 4.85e-163 471
Msa1274520 AT1G47840.1 53.304 454 207 5 40 491 43 493 7.26e-162 468
Msa1274520 AT3G20040.1 49.393 494 241 4 1 487 1 492 4.61e-154 448
Msa1274520 AT1G50460.3 50.493 406 187 6 93 487 17 419 6.19e-129 381
Msa1274520 AT4G37840.1 44.770 478 234 8 22 486 22 482 1.21e-123 370
Msa1274520 AT1G50460.2 54.985 331 146 3 26 355 26 354 9.20e-122 361
Msa1274520 AT1G47840.2 57.862 318 130 4 40 355 43 358 7.67e-119 354
Msa1274520 AT1G47845.1 45.890 146 76 3 278 422 40 183 1.51e-33 125

Find 135 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAATTTCTGGAATGTATT+TGG 0.102636 8_3:-8281257 Msa1274520:CDS
AAAATAAGAATAAATGATTT+TGG 0.177715 8_3:+8284109 None:intergenic
GGCAAATCACCGTGCCATTT+TGG 0.226362 8_3:+8281580 None:intergenic
TGAAAGTTCCATTCATATTA+AGG 0.249236 8_3:-8281159 Msa1274520:intron
TAGACTGCTGGGGTCAAAAT+TGG 0.268648 8_3:+8280176 None:intergenic
CAACCACCTTTCTCACTTCT+AGG 0.268954 8_3:+8280554 None:intergenic
TCTCATTCTTATTACCTTGA+TGG 0.273691 8_3:-8280256 Msa1274520:CDS
GAATAGTCATACTCAGTTAA+TGG 0.280021 8_3:+8281410 None:intergenic
ATAATTTCTGGAATGTATTT+GGG 0.310052 8_3:-8281256 Msa1274520:CDS
GAAATGGATGTTTGCTTGAC+AGG 0.331885 8_3:+8282055 None:intergenic
GTCAATCTTTCCTAGACTGC+TGG 0.345017 8_3:+8280164 None:intergenic
TGTCCAGTTGATAAGGTTCC+CGG 0.354220 8_3:+8282030 None:intergenic
CTCTAAGATCTCCTTCAGTT+TGG 0.361754 8_3:+8280740 None:intergenic
CACGGTGATTTGCCCAAGTC+TGG 0.362234 8_3:-8281571 Msa1274520:CDS
CTAATTTCTACAATGCTGTT+AGG 0.374031 8_3:-8280059 Msa1274520:three_prime_UTR
TGAAGAAAGTGAAGATTTCA+AGG 0.377653 8_3:-8282122 Msa1274520:CDS
GATGTCCCGACCATCAAATT+TGG 0.377775 8_3:+8282325 None:intergenic
TTCGTTGATAATCTTCCTAC+AGG 0.388159 8_3:-8283705 Msa1274520:CDS
AATTTGTACCTTAATATGAA+TGG 0.398733 8_3:+8281151 None:intergenic
CTTCCGGGAACCTTATCAAC+TGG 0.399679 8_3:-8282033 Msa1274520:CDS
TTCCTCCAAATTTGATGGTC+GGG 0.401839 8_3:-8282330 Msa1274520:CDS
CGCAATTGTACCTGTTCACC+AGG 0.404155 8_3:+8281365 None:intergenic
GTGGCGTGTGCGACGGTGAT+AGG 0.406282 8_3:-8283942 Msa1274520:CDS
TCAAATGATGGTTCAGGAAC+TGG 0.407132 8_3:-8280298 Msa1274520:CDS
GTGCTCAAGCAATACCAAAA+TGG 0.410001 8_3:-8281594 Msa1274520:CDS
GATACAGTCGGGACATTAGC+TGG 0.411737 8_3:-8281691 Msa1274520:CDS
AAGCAAACATCCATTTCTTC+CGG 0.412903 8_3:-8282049 Msa1274520:CDS
GAGTTTAAACCCTGGTGAAC+AGG 0.414005 8_3:-8281375 Msa1274520:intron
TCGTAGAGTACTATACAAAA+TGG 0.414429 8_3:-8281224 Msa1274520:CDS
ACATGGAGTGGGGAAACTTC+CGG 0.420382 8_3:-8281445 Msa1274520:CDS
CACGTACGCTGCATTTGTTC+CGG 0.422595 8_3:+8281621 None:intergenic
TGATATGAACATAACAGCTT+TGG 0.423547 8_3:-8281836 Msa1274520:intron
GACATGCACACATATACTTT+AGG 0.427494 8_3:-8280144 Msa1274520:three_prime_UTR
GTCAATTCCTCCAAATTTGA+TGG 0.432250 8_3:-8282335 Msa1274520:CDS
GTTGTTTACATAGGTTGGTC+AGG 0.435843 8_3:-8281902 Msa1274520:intron
AGCAAACATCCATTTCTTCC+GGG 0.437620 8_3:-8282048 Msa1274520:CDS
CAAACTGAAGGAGATCTTAG+AGG 0.442709 8_3:-8280739 Msa1274520:intron
AACCTTATCAACTGGACAAA+AGG 0.443207 8_3:-8282025 Msa1274520:CDS
TCAATCTTTCCTAGACTGCT+GGG 0.445171 8_3:+8280165 None:intergenic
TTAGCAATTATCATGTTGTT+CGG 0.445298 8_3:-8280233 Msa1274520:exon
TAGTACATTGCAAAATTCTC+AGG 0.448133 8_3:+8280079 None:intergenic
CACGCTGGTCTTGCTTCTGA+TGG 0.450067 8_3:-8283756 Msa1274520:CDS
GATAAGGTTCCCGGAAGAAA+TGG 0.455246 8_3:+8282039 None:intergenic
ACTCACCATTTCTCCAGACT+TGG 0.457826 8_3:+8281558 None:intergenic
CGTGGGAATTCTGAAGAAGT+TGG 0.463666 8_3:-8280476 Msa1274520:CDS
TGAGCAAATATTGCAAGAAA+AGG 0.465717 8_3:+8280121 None:intergenic
GAACACTCAAATGATGGTTC+AGG 0.466423 8_3:-8280304 Msa1274520:CDS
GGTGCTCGTCTTTCTGCAGC+TGG 0.483516 8_3:-8280502 Msa1274520:CDS
ACCAACGTTGAAACTGAAAC+AGG 0.486698 8_3:-8283805 Msa1274520:CDS
ACAAAATGGCTGAAGAAGCT+TGG 0.486720 8_3:-8281210 Msa1274520:CDS
GTGGGAATTCTGAAGAAGTT+GGG 0.490235 8_3:-8280475 Msa1274520:CDS
ATCGTTGAACACTCAAATGA+TGG 0.490582 8_3:-8280310 Msa1274520:CDS
ATTCTTCTGACCCTCGCCAT+TGG 0.494342 8_3:+8280438 None:intergenic
CCTAGCTCCCTCTTTCTACC+TGG 0.503608 8_3:+8282094 None:intergenic
CTGACCCTCGCCATTGGTGA+TGG 0.505110 8_3:+8280444 None:intergenic
CCAGGTAGAAAGAGGGAGCT+AGG 0.506646 8_3:-8282094 Msa1274520:CDS
TTGCTTGACAGGAAAGGAAA+AGG 0.507613 8_3:+8282066 None:intergenic
CTCATATAGTCCGCCATCCA+TGG 0.510941 8_3:+8280408 None:intergenic
AACCACCTTTCTCACTTCTA+GGG 0.512710 8_3:+8280555 None:intergenic
CGGAACAAATGCAGCGTACG+TGG 0.515444 8_3:-8281620 Msa1274520:CDS
ATGATAATTGCTAACCATCA+AGG 0.517087 8_3:+8280242 None:intergenic
TTTGCCCAAGTCTGGAGAAA+TGG 0.519733 8_3:-8281563 Msa1274520:intron
TTAATGGAAGGTGCGATGAC+CGG 0.525333 8_3:+8281426 None:intergenic
AGCAACGGCGGCGTGTGTGG+TGG 0.526558 8_3:-8283919 Msa1274520:CDS
TGACATCCTTGTTTGTATGT+CGG 0.537032 8_3:+8281665 None:intergenic
GTGAGTGTGCGTGTGTACTT+TGG 0.541053 8_3:-8284024 Msa1274520:five_prime_UTR
AAAAGCAATAGCGATATTGA+AGG 0.541074 8_3:-8283850 Msa1274520:CDS
CTTTCTGCAGCTGGTATCGT+GGG 0.541549 8_3:-8280493 Msa1274520:CDS
GGCGGCGTGTGTGGTGGCGA+CGG 0.541737 8_3:-8283913 Msa1274520:CDS
TGCAGAAAGACGAGCACCAC+GGG 0.544093 8_3:+8280507 None:intergenic
AGGTTCCTCCAGGTAGAAAG+AGG 0.544405 8_3:-8282102 Msa1274520:CDS
GGATGTTTGCTTGACAGGAA+AGG 0.545412 8_3:+8282060 None:intergenic
GAAGATTTCAAGGTTCCTCC+AGG 0.545754 8_3:-8282112 Msa1274520:CDS
CGTGTATTACGTGTGCAACT+TGG 0.548240 8_3:-8282397 Msa1274520:CDS
AATACCATAAAAGAGTTGCT+TGG 0.548770 8_3:-8280355 Msa1274520:CDS
ATTCCTCCAAATTTGATGGT+CGG 0.548843 8_3:-8282331 Msa1274520:CDS
AAAGGTGGTGGCGTGTGCGA+CGG 0.549544 8_3:-8283949 Msa1274520:CDS
ACGTGAAGAAATCGAAGCGA+TGG 0.554895 8_3:-8283875 Msa1274520:CDS
TCTTTCTGCAGCTGGTATCG+TGG 0.555070 8_3:-8280494 Msa1274520:CDS
ATAAAAGAGTTGCTTGGTGA+AGG 0.558125 8_3:-8280349 Msa1274520:CDS
GTAGGTTATCAACATGGAGT+GGG 0.559686 8_3:-8281456 Msa1274520:intron
CTCACCATTTCTCCAGACTT+GGG 0.559699 8_3:+8281559 None:intergenic
AGGAGCAACGGCGGCGTGTG+TGG 0.559858 8_3:-8283922 Msa1274520:CDS
TGCAATATTGTTGCTACCCG+TGG 0.560003 8_3:-8280523 Msa1274520:CDS
GTTGCTTGGTGAAGGTGTAT+CGG 0.561921 8_3:-8280341 Msa1274520:CDS
ATAGGTTGGTCAGGATGTTG+TGG 0.569173 8_3:-8281893 Msa1274520:intron
GTCCCGACCATCAAATTTGG+AGG 0.570166 8_3:+8282328 None:intergenic
TGATGCATGGCAGACATGTC+AGG 0.576522 8_3:+8280795 None:intergenic
TACCTCCCTAGAAGTGAGAA+AGG 0.582685 8_3:-8280560 Msa1274520:CDS
CGTGAAGAAATCGAAGCGAT+GGG 0.582816 8_3:-8283874 Msa1274520:CDS
AATAGGTCAATGATACAGTC+GGG 0.583803 8_3:-8281702 Msa1274520:intron
GCTGGTCTTGCTTCTGATGG+TGG 0.587614 8_3:-8283753 Msa1274520:CDS
CAATAGGTCAATGATACAGT+CGG 0.587691 8_3:-8281703 Msa1274520:intron
AGCGGACGAGTCATGATGCA+TGG 0.597968 8_3:+8280782 None:intergenic
GTGCAACTTGGTGGCAAGGA+TGG 0.599780 8_3:-8282385 Msa1274520:CDS
CACGAAAGTTAGTTCCTCCA+AGG 0.603283 8_3:+8282416 None:intergenic
GTATTACGTGTGCAACTTGG+TGG 0.603393 8_3:-8282394 Msa1274520:CDS
GATACCATCACCAATGGCGA+GGG 0.608591 8_3:-8280448 Msa1274520:CDS
TCAGAAGAATGTGATAGCCA+TGG 0.609370 8_3:-8280425 Msa1274520:CDS
ACCTGTTTCAGTTTCAACGT+TGG 0.610468 8_3:+8283804 None:intergenic
CGTGGTCAAAACCAAACTGA+AGG 0.612639 8_3:-8280751 Msa1274520:CDS
CACCTTTCTCACTTCTAGGG+AGG 0.616334 8_3:+8280558 None:intergenic
AGTCATACTCAGTTAATGGA+AGG 0.616474 8_3:+8281414 None:intergenic
TGCGACGGTGATAGGAGCAA+CGG 0.625086 8_3:-8283934 Msa1274520:CDS
GGTTCCTCCAGGTAGAAAGA+GGG 0.629047 8_3:-8282101 Msa1274520:CDS
GGAAAAGATACCATCACCAA+TGG 0.629885 8_3:-8280454 Msa1274520:CDS
TGTAGGTTATCAACATGGAG+TGG 0.631248 8_3:-8281457 Msa1274520:intron
AGATACCATCACCAATGGCG+AGG 0.631420 8_3:-8280449 Msa1274520:CDS
TTTGACCACGTTGAGATCAG+CGG 0.635751 8_3:+8280764 None:intergenic
TCGTTGATAATCTTCCTACA+GGG 0.639680 8_3:-8283704 Msa1274520:intron
ACAGGTTGCTGATGCAATGA+CGG 0.641090 8_3:-8283787 Msa1274520:CDS
AAGAATGTGATAGCCATGGA+TGG 0.641622 8_3:-8280421 Msa1274520:CDS
TCCCTCTCTGTTTAGGAACG+AGG 0.652781 8_3:-8282461 Msa1274520:intron
AGCTCCCTCTTTCTACCTGG+AGG 0.653342 8_3:+8282097 None:intergenic
ACGTGTGCAACTTGGTGGCA+AGG 0.654572 8_3:-8282389 Msa1274520:CDS
ATGACGGTGGAGATGCACGC+TGG 0.657627 8_3:-8283771 Msa1274520:CDS
GTGAAGAAATCGAAGCGATG+GGG 0.658037 8_3:-8283873 Msa1274520:CDS
CAATCTTTCCTAGACTGCTG+GGG 0.658971 8_3:+8280166 None:intergenic
TAGGTTATCAACATGGAGTG+GGG 0.662335 8_3:-8281455 Msa1274520:CDS
AGAAAAGCAATTGAGAGACA+AGG 0.664902 8_3:-8281862 Msa1274520:CDS
ATTTGGAGGAATTGACACCT+CGG 0.667035 8_3:+8282342 None:intergenic
TCTCTGTTTAGGAACGAGGA+AGG 0.672788 8_3:-8282457 Msa1274520:intron
CAAGCAATACCAAAATGGCA+CGG 0.683179 8_3:-8281589 Msa1274520:CDS
GCAATTGTACCTGTTCACCA+GGG 0.688661 8_3:+8281366 None:intergenic
CTGCAGAAAGACGAGCACCA+CGG 0.694987 8_3:+8280506 None:intergenic
ACTGATGTAGGTTATCAACA+TGG 0.696815 8_3:-8281462 Msa1274520:intron
AATGTGATAGCCATGGATGG+CGG 0.697169 8_3:-8280418 Msa1274520:CDS
CTCCCTAGAAGTGAGAAAGG+TGG 0.698711 8_3:-8280557 Msa1274520:CDS
GATGCTGAGAGTTTAAACCC+TGG 0.699870 8_3:-8281383 Msa1274520:CDS
CTCGTCCGCTGATCTCAACG+TGG 0.700399 8_3:-8280769 Msa1274520:CDS
TGGAGGCCGACATACAAACA+AGG 0.703627 8_3:-8281671 Msa1274520:CDS
GACGGTGATAGGAGCAACGG+CGG 0.709850 8_3:-8283931 Msa1274520:CDS
ACAGTCGGGACATTAGCTGG+AGG 0.724132 8_3:-8281688 Msa1274520:CDS
GGTTGCTGATGCAATGACGG+TGG 0.729595 8_3:-8283784 Msa1274520:CDS
TGTCAGTCGAGAATTTACCG+AGG 0.797194 8_3:-8282359 Msa1274520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAGAATAAATGATTT+TGG + chr8_3:8280067-8280086 None:intergenic 10.0%
!!! ATCATTTATTCTTATTTTTA+AGG - chr8_3:8280069-8280088 Msa1274520:three_prime_UTR 10.0%
!!! AAAATATTTTAATACTTTTC+AGG + chr8_3:8281679-8281698 None:intergenic 10.0%
!! ATACAATTAAAAAAACAAAA+AGG + chr8_3:8283582-8283601 None:intergenic 10.0%
!!! AAAATAAGAATAAATGATTT+TGG + chr8_3:8280067-8280086 None:intergenic 10.0%
!!! ATCATTTATTCTTATTTTTA+AGG - chr8_3:8280069-8280088 Msa1274520:three_prime_UTR 10.0%
!!! AAAATATTTTAATACTTTTC+AGG + chr8_3:8281679-8281698 None:intergenic 10.0%
!! ATACAATTAAAAAAACAAAA+AGG + chr8_3:8283582-8283601 None:intergenic 10.0%
!!! ATTTTTTTTCCTGAAATTTT+CGG - chr8_3:8282870-8282889 Msa1274520:intron 15.0%
!! ATTAAAAAAACAAAAAGGAA+CGG + chr8_3:8283577-8283596 None:intergenic 15.0%
!!! TTTTGTATCAACTATATTTT+TGG - chr8_3:8283964-8283983 Msa1274520:exon 15.0%
!!! ATTTTTTTTCCTGAAATTTT+CGG - chr8_3:8282870-8282889 Msa1274520:intron 15.0%
!! ATTAAAAAAACAAAAAGGAA+CGG + chr8_3:8283577-8283596 None:intergenic 15.0%
!!! TTTTGTATCAACTATATTTT+TGG - chr8_3:8283964-8283983 Msa1274520:exon 15.0%
!!! AATGATTTTGGTAAGATTTT+AGG + chr8_3:8280055-8280074 None:intergenic 20.0%
!! TAGATCAATATGATTAAGAT+TGG + chr8_3:8280510-8280529 None:intergenic 20.0%
!!! TTTTATCAAATAAATACCAG+TGG + chr8_3:8280745-8280764 None:intergenic 20.0%
!!! TTCTTTCTTTGTTTATAAGT+TGG - chr8_3:8280872-8280891 Msa1274520:intron 20.0%
!! TTAAATGTTATGATAAGTGA+CGG - chr8_3:8281097-8281116 Msa1274520:intron 20.0%
!! TGTTTATTTAAGCTGTTTAT+CGG - chr8_3:8281231-8281250 Msa1274520:CDS 20.0%
!! ATATATAGACACATAAAAAG+TGG + chr8_3:8281443-8281462 None:intergenic 20.0%
!!! AGATGTAATTGTTTTTCTAA+TGG - chr8_3:8281549-8281568 Msa1274520:intron 20.0%
!! CTATAAAAATTCAAAATGCT+CGG + chr8_3:8281656-8281675 None:intergenic 20.0%
!! AAGAGTAAATAGTAATTGTT+AGG + chr8_3:8281919-8281938 None:intergenic 20.0%
!!! TGAATCACATTTTTATAGAT+TGG + chr8_3:8281986-8282005 None:intergenic 20.0%
!! AATCTATAAAAATGTGATTC+AGG - chr8_3:8281985-8282004 Msa1274520:intron 20.0%
!! AAACTGAGTATAAAATGTAA+AGG + chr8_3:8282247-8282266 None:intergenic 20.0%
!!! GCATTTTCAATTAATTTTTC+TGG - chr8_3:8282401-8282420 Msa1274520:CDS 20.0%
!!! ATAATTTCTGGAATGTATTT+GGG - chr8_3:8282917-8282936 Msa1274520:intron 20.0%
!! AATTTGTACCTTAATATGAA+TGG + chr8_3:8283025-8283044 None:intergenic 20.0%
!! ATTACAGATTAAGCAAATTT+AGG + chr8_3:8283148-8283167 None:intergenic 20.0%
!! AATAAAATTCTTGAATTCCT+TGG - chr8_3:8283269-8283288 Msa1274520:intron 20.0%
!!! AATGACATCTGAATTTTTAA+AGG - chr8_3:8283521-8283540 Msa1274520:intron 20.0%
!!! AATGATTTTGGTAAGATTTT+AGG + chr8_3:8280055-8280074 None:intergenic 20.0%
!! TAGATCAATATGATTAAGAT+TGG + chr8_3:8280510-8280529 None:intergenic 20.0%
!!! TTTTATCAAATAAATACCAG+TGG + chr8_3:8280745-8280764 None:intergenic 20.0%
!!! TTCTTTCTTTGTTTATAAGT+TGG - chr8_3:8280872-8280891 Msa1274520:intron 20.0%
!! TTAAATGTTATGATAAGTGA+CGG - chr8_3:8281097-8281116 Msa1274520:intron 20.0%
!! TGTTTATTTAAGCTGTTTAT+CGG - chr8_3:8281231-8281250 Msa1274520:CDS 20.0%
!! ATATATAGACACATAAAAAG+TGG + chr8_3:8281443-8281462 None:intergenic 20.0%
!!! AGATGTAATTGTTTTTCTAA+TGG - chr8_3:8281549-8281568 Msa1274520:intron 20.0%
!! CTATAAAAATTCAAAATGCT+CGG + chr8_3:8281656-8281675 None:intergenic 20.0%
!! AAGAGTAAATAGTAATTGTT+AGG + chr8_3:8281919-8281938 None:intergenic 20.0%
!!! TGAATCACATTTTTATAGAT+TGG + chr8_3:8281986-8282005 None:intergenic 20.0%
!! AATCTATAAAAATGTGATTC+AGG - chr8_3:8281985-8282004 Msa1274520:intron 20.0%
!! AAACTGAGTATAAAATGTAA+AGG + chr8_3:8282247-8282266 None:intergenic 20.0%
!!! GCATTTTCAATTAATTTTTC+TGG - chr8_3:8282401-8282420 Msa1274520:CDS 20.0%
!!! ATAATTTCTGGAATGTATTT+GGG - chr8_3:8282917-8282936 Msa1274520:intron 20.0%
!! AATTTGTACCTTAATATGAA+TGG + chr8_3:8283025-8283044 None:intergenic 20.0%
!! ATTACAGATTAAGCAAATTT+AGG + chr8_3:8283148-8283167 None:intergenic 20.0%
!! AATAAAATTCTTGAATTCCT+TGG - chr8_3:8283269-8283288 Msa1274520:intron 20.0%
!!! AATGACATCTGAATTTTTAA+AGG - chr8_3:8283521-8283540 Msa1274520:intron 20.0%
!!! ATTTTGGTAAGATTTTAGGT+CGG + chr8_3:8280051-8280070 None:intergenic 25.0%
!!! ATCTTTTTGGGTTTTAATGT+CGG + chr8_3:8280201-8280220 None:intergenic 25.0%
! ACATTAAAACCCAAAAAGAT+GGG - chr8_3:8280201-8280220 Msa1274520:three_prime_UTR 25.0%
!!! GAGATTTATTTTGAGAATGT+TGG - chr8_3:8280910-8280929 Msa1274520:intron 25.0%
!! GTAATTGTTGATAAAGTAGA+CGG - chr8_3:8281033-8281052 Msa1274520:intron 25.0%
! TCATTCAAACTTCAATAAGA+AGG + chr8_3:8281271-8281290 None:intergenic 25.0%
! TAACAATAAATGAGCACAAA+TGG + chr8_3:8281302-8281321 None:intergenic 25.0%
!!! ATAAACTGATTTTGTACTAG+AGG - chr8_3:8281322-8281341 Msa1274520:intron 25.0%
! AGTTATGAAATGTGACTAAT+GGG + chr8_3:8281593-8281612 None:intergenic 25.0%
! GATTAAAGCAAATAACTTTC+TGG + chr8_3:8281943-8281962 None:intergenic 25.0%
!!! AGTTTTATCGTTGTTTACAT+AGG - chr8_3:8282262-8282281 Msa1274520:intron 25.0%
! TTATATATTCAGCATCCAAT+AGG - chr8_3:8282454-8282473 Msa1274520:intron 25.0%
! ATTAATAGCCTCGTTTATTA+AGG + chr8_3:8282852-8282871 None:intergenic 25.0%
!!! ACTTTTGAGAAGATAATTTC+TGG - chr8_3:8282905-8282924 Msa1274520:intron 25.0%
!!! GATAATTTCTGGAATGTATT+TGG - chr8_3:8282916-8282935 Msa1274520:intron 25.0%
! TGAAAGTTCCATTCATATTA+AGG - chr8_3:8283014-8283033 Msa1274520:intron 25.0%
! AATTTAGGCAGAAAGAAATT+AGG + chr8_3:8283133-8283152 None:intergenic 25.0%
! TCGATTATAATACAGGTAAA+GGG + chr8_3:8283317-8283336 None:intergenic 25.0%
! TTCGATTATAATACAGGTAA+AGG + chr8_3:8283318-8283337 None:intergenic 25.0%
! AAGAAGTTCGATTATAATAC+AGG + chr8_3:8283324-8283343 None:intergenic 25.0%
!!! TGAATTTTTAAAGGTCGATA+TGG - chr8_3:8283530-8283549 Msa1274520:intron 25.0%
! TTAGCAATTATCATGTTGTT+CGG - chr8_3:8283940-8283959 Msa1274520:CDS 25.0%
!!! ATTTTGGTAAGATTTTAGGT+CGG + chr8_3:8280051-8280070 None:intergenic 25.0%
!!! ATCTTTTTGGGTTTTAATGT+CGG + chr8_3:8280201-8280220 None:intergenic 25.0%
! ACATTAAAACCCAAAAAGAT+GGG - chr8_3:8280201-8280220 Msa1274520:three_prime_UTR 25.0%
!!! GAGATTTATTTTGAGAATGT+TGG - chr8_3:8280910-8280929 Msa1274520:intron 25.0%
!! GTAATTGTTGATAAAGTAGA+CGG - chr8_3:8281033-8281052 Msa1274520:intron 25.0%
! TCATTCAAACTTCAATAAGA+AGG + chr8_3:8281271-8281290 None:intergenic 25.0%
! TAACAATAAATGAGCACAAA+TGG + chr8_3:8281302-8281321 None:intergenic 25.0%
!!! ATAAACTGATTTTGTACTAG+AGG - chr8_3:8281322-8281341 Msa1274520:intron 25.0%
! AGTTATGAAATGTGACTAAT+GGG + chr8_3:8281593-8281612 None:intergenic 25.0%
! GATTAAAGCAAATAACTTTC+TGG + chr8_3:8281943-8281962 None:intergenic 25.0%
!!! AGTTTTATCGTTGTTTACAT+AGG - chr8_3:8282262-8282281 Msa1274520:intron 25.0%
! TTATATATTCAGCATCCAAT+AGG - chr8_3:8282454-8282473 Msa1274520:intron 25.0%
! ATTAATAGCCTCGTTTATTA+AGG + chr8_3:8282852-8282871 None:intergenic 25.0%
!!! ACTTTTGAGAAGATAATTTC+TGG - chr8_3:8282905-8282924 Msa1274520:intron 25.0%
!!! GATAATTTCTGGAATGTATT+TGG - chr8_3:8282916-8282935 Msa1274520:intron 25.0%
! TGAAAGTTCCATTCATATTA+AGG - chr8_3:8283014-8283033 Msa1274520:intron 25.0%
! AATTTAGGCAGAAAGAAATT+AGG + chr8_3:8283133-8283152 None:intergenic 25.0%
! TCGATTATAATACAGGTAAA+GGG + chr8_3:8283317-8283336 None:intergenic 25.0%
! TTCGATTATAATACAGGTAA+AGG + chr8_3:8283318-8283337 None:intergenic 25.0%
! AAGAAGTTCGATTATAATAC+AGG + chr8_3:8283324-8283343 None:intergenic 25.0%
!!! TGAATTTTTAAAGGTCGATA+TGG - chr8_3:8283530-8283549 Msa1274520:intron 25.0%
! TTAGCAATTATCATGTTGTT+CGG - chr8_3:8283940-8283959 Msa1274520:CDS 25.0%
GACATTAAAACCCAAAAAGA+TGG - chr8_3:8280200-8280219 Msa1274520:three_prime_UTR 30.0%
AAAAGCAATAGCGATATTGA+AGG - chr8_3:8280323-8280342 Msa1274520:CDS 30.0%
!! TATAAGTTGGCTTTGTATCA+TGG - chr8_3:8280885-8280904 Msa1274520:intron 30.0%
! ACGAATGTTGATAAAGTAGA+TGG - chr8_3:8281150-8281169 Msa1274520:intron 30.0%
CAGTTATGAAATGTGACTAA+TGG + chr8_3:8281594-8281613 None:intergenic 30.0%
TGAAGAAAGTGAAGATTTCA+AGG - chr8_3:8282051-8282070 Msa1274520:CDS 30.0%
TGTAAAGGTGAAAGAATAAC+CGG + chr8_3:8282232-8282251 None:intergenic 30.0%
TTATCGTTGTTTACATAGGT+TGG - chr8_3:8282266-8282285 Msa1274520:intron 30.0%
TGATATGAACATAACAGCTT+TGG - chr8_3:8282337-8282356 Msa1274520:CDS 30.0%
GAATAGTCATACTCAGTTAA+TGG + chr8_3:8282766-8282785 None:intergenic 30.0%
CTTATTTGCCTTAATAAACG+AGG - chr8_3:8282841-8282860 Msa1274520:intron 30.0%
TTCTCAAAAGTCTACATGTA+TGG + chr8_3:8282896-8282915 None:intergenic 30.0%
! TCGTAGAGTACTATACAAAA+TGG - chr8_3:8282949-8282968 Msa1274520:intron 30.0%
!!! AACTTTCAGTTTTGAAGGAA+TGG + chr8_3:8283002-8283021 None:intergenic 30.0%
!! AATGGAACTTTCAGTTTTGA+AGG + chr8_3:8283007-8283026 None:intergenic 30.0%
ATTGTAACATTCGTGATTGT+TGG - chr8_3:8283082-8283101 Msa1274520:intron 30.0%
! TGTTTTCACTATCTTCTGTT+TGG + chr8_3:8283196-8283215 None:intergenic 30.0%
TTGTGTAAGCAATATTCACA+TGG + chr8_3:8283239-8283258 None:intergenic 30.0%
! TATAAGAAGCACATTAACCA+AGG + chr8_3:8283289-8283308 None:intergenic 30.0%
CGATTATAATACAGGTAAAG+GGG + chr8_3:8283316-8283335 None:intergenic 30.0%
! GACACTAAAAAAAGCCTTTT+TGG + chr8_3:8283496-8283515 None:intergenic 30.0%
AATACCATAAAAGAGTTGCT+TGG - chr8_3:8283818-8283837 Msa1274520:CDS 30.0%
TCTCATTCTTATTACCTTGA+TGG - chr8_3:8283917-8283936 Msa1274520:CDS 30.0%
ATGATAATTGCTAACCATCA+AGG + chr8_3:8283934-8283953 None:intergenic 30.0%
TGAGCAAATATTGCAAGAAA+AGG + chr8_3:8284055-8284074 None:intergenic 30.0%
TAGTACATTGCAAAATTCTC+AGG + chr8_3:8284097-8284116 None:intergenic 30.0%
CTAATTTCTACAATGCTGTT+AGG - chr8_3:8284114-8284133 Msa1274520:five_prime_UTR 30.0%
GACATTAAAACCCAAAAAGA+TGG - chr8_3:8280200-8280219 Msa1274520:three_prime_UTR 30.0%
AAAAGCAATAGCGATATTGA+AGG - chr8_3:8280323-8280342 Msa1274520:CDS 30.0%
!! TATAAGTTGGCTTTGTATCA+TGG - chr8_3:8280885-8280904 Msa1274520:intron 30.0%
! ACGAATGTTGATAAAGTAGA+TGG - chr8_3:8281150-8281169 Msa1274520:intron 30.0%
CAGTTATGAAATGTGACTAA+TGG + chr8_3:8281594-8281613 None:intergenic 30.0%
TGAAGAAAGTGAAGATTTCA+AGG - chr8_3:8282051-8282070 Msa1274520:CDS 30.0%
TGTAAAGGTGAAAGAATAAC+CGG + chr8_3:8282232-8282251 None:intergenic 30.0%
TTATCGTTGTTTACATAGGT+TGG - chr8_3:8282266-8282285 Msa1274520:intron 30.0%
TGATATGAACATAACAGCTT+TGG - chr8_3:8282337-8282356 Msa1274520:CDS 30.0%
GAATAGTCATACTCAGTTAA+TGG + chr8_3:8282766-8282785 None:intergenic 30.0%
CTTATTTGCCTTAATAAACG+AGG - chr8_3:8282841-8282860 Msa1274520:intron 30.0%
TTCTCAAAAGTCTACATGTA+TGG + chr8_3:8282896-8282915 None:intergenic 30.0%
! TCGTAGAGTACTATACAAAA+TGG - chr8_3:8282949-8282968 Msa1274520:intron 30.0%
!!! AACTTTCAGTTTTGAAGGAA+TGG + chr8_3:8283002-8283021 None:intergenic 30.0%
!! AATGGAACTTTCAGTTTTGA+AGG + chr8_3:8283007-8283026 None:intergenic 30.0%
ATTGTAACATTCGTGATTGT+TGG - chr8_3:8283082-8283101 Msa1274520:intron 30.0%
! TGTTTTCACTATCTTCTGTT+TGG + chr8_3:8283196-8283215 None:intergenic 30.0%
TTGTGTAAGCAATATTCACA+TGG + chr8_3:8283239-8283258 None:intergenic 30.0%
! TATAAGAAGCACATTAACCA+AGG + chr8_3:8283289-8283308 None:intergenic 30.0%
CGATTATAATACAGGTAAAG+GGG + chr8_3:8283316-8283335 None:intergenic 30.0%
! GACACTAAAAAAAGCCTTTT+TGG + chr8_3:8283496-8283515 None:intergenic 30.0%
AATACCATAAAAGAGTTGCT+TGG - chr8_3:8283818-8283837 Msa1274520:CDS 30.0%
TCTCATTCTTATTACCTTGA+TGG - chr8_3:8283917-8283936 Msa1274520:CDS 30.0%
ATGATAATTGCTAACCATCA+AGG + chr8_3:8283934-8283953 None:intergenic 30.0%
TGAGCAAATATTGCAAGAAA+AGG + chr8_3:8284055-8284074 None:intergenic 30.0%
TAGTACATTGCAAAATTCTC+AGG + chr8_3:8284097-8284116 None:intergenic 30.0%
CTAATTTCTACAATGCTGTT+AGG - chr8_3:8284114-8284133 Msa1274520:five_prime_UTR 30.0%
AAAACCCAAAAAGATGGGAA+AGG - chr8_3:8280206-8280225 Msa1274520:three_prime_UTR 35.0%
!! TTCGTTGATAATCTTCCTAC+AGG - chr8_3:8280468-8280487 Msa1274520:CDS 35.0%
!! TCGTTGATAATCTTCCTACA+GGG - chr8_3:8280469-8280488 Msa1274520:CDS 35.0%
TCAAAAAAGTGATACCCTGT+AGG + chr8_3:8280486-8280505 None:intergenic 35.0%
! GATTGTGAACATTTGTTGCT+TGG - chr8_3:8281396-8281415 Msa1274520:CDS 35.0%
GAAGTTGCTAGTTGACAATT+GGG - chr8_3:8281519-8281538 Msa1274520:intron 35.0%
! GGAAGGACTATTTTATGCAT+TGG - chr8_3:8281733-8281752 Msa1274520:intron 35.0%
! CTATTTTATGCATTGGACCT+TGG - chr8_3:8281740-8281759 Msa1274520:intron 35.0%
GTCAATTCCTCCAAATTTGA+TGG - chr8_3:8281838-8281857 Msa1274520:CDS 35.0%
! ATTCCTCCAAATTTGATGGT+CGG - chr8_3:8281842-8281861 Msa1274520:CDS 35.0%
GGTCATGTTTCTCATACAAA+TGG + chr8_3:8281965-8281984 None:intergenic 35.0%
AAGCAAACATCCATTTCTTC+CGG - chr8_3:8282124-8282143 Msa1274520:CDS 35.0%
AACCTTATCAACTGGACAAA+AGG - chr8_3:8282148-8282167 Msa1274520:CDS 35.0%
CATCAAAGCAATTAGGATTC+TGG + chr8_3:8282199-8282218 None:intergenic 35.0%
!! GGAAAAGCATCAAAGCAATT+AGG + chr8_3:8282206-8282225 None:intergenic 35.0%
AGAAAAGCAATTGAGAGACA+AGG - chr8_3:8282311-8282330 Msa1274520:intron 35.0%
CAATAGGTCAATGATACAGT+CGG - chr8_3:8282470-8282489 Msa1274520:intron 35.0%
AATAGGTCAATGATACAGTC+GGG - chr8_3:8282471-8282490 Msa1274520:intron 35.0%
! TGACATCCTTGTTTGTATGT+CGG + chr8_3:8282511-8282530 None:intergenic 35.0%
!!! GTCATTGCTGCTGTTATTTT+AGG - chr8_3:8282527-8282546 Msa1274520:intron 35.0%
TCAATATATGCGACTGATGT+AGG - chr8_3:8282699-8282718 Msa1274520:intron 35.0%
ACTGATGTAGGTTATCAACA+TGG - chr8_3:8282711-8282730 Msa1274520:intron 35.0%
AGTCATACTCAGTTAATGGA+AGG + chr8_3:8282762-8282781 None:intergenic 35.0%
AATGTTACAATGCATGCAAG+TGG + chr8_3:8283073-8283092 None:intergenic 35.0%
ACCATAATAATTTGACGTGC+AGG - chr8_3:8283352-8283371 Msa1274520:intron 35.0%
TCCTGCACGTCAAATTATTA+TGG + chr8_3:8283356-8283375 None:intergenic 35.0%
TCCCATCAATGTTTCCAAAA+AGG - chr8_3:8283479-8283498 Msa1274520:intron 35.0%
!! GCCTTTTTGGAAACATTGAT+GGG + chr8_3:8283483-8283502 None:intergenic 35.0%
!! AGCCTTTTTGGAAACATTGA+TGG + chr8_3:8283484-8283503 None:intergenic 35.0%
! TTCACCAAGCAACTCTTTTA+TGG + chr8_3:8283825-8283844 None:intergenic 35.0%
! ATAAAAGAGTTGCTTGGTGA+AGG - chr8_3:8283824-8283843 Msa1274520:CDS 35.0%
ATCGTTGAACACTCAAATGA+TGG - chr8_3:8283863-8283882 Msa1274520:CDS 35.0%
GACATGCACACATATACTTT+AGG - chr8_3:8284029-8284048 Msa1274520:five_prime_UTR 35.0%
AAAACCCAAAAAGATGGGAA+AGG - chr8_3:8280206-8280225 Msa1274520:three_prime_UTR 35.0%
!! TTCGTTGATAATCTTCCTAC+AGG - chr8_3:8280468-8280487 Msa1274520:CDS 35.0%
!! TCGTTGATAATCTTCCTACA+GGG - chr8_3:8280469-8280488 Msa1274520:CDS 35.0%
TCAAAAAAGTGATACCCTGT+AGG + chr8_3:8280486-8280505 None:intergenic 35.0%
! GATTGTGAACATTTGTTGCT+TGG - chr8_3:8281396-8281415 Msa1274520:CDS 35.0%
GAAGTTGCTAGTTGACAATT+GGG - chr8_3:8281519-8281538 Msa1274520:intron 35.0%
! GGAAGGACTATTTTATGCAT+TGG - chr8_3:8281733-8281752 Msa1274520:intron 35.0%
! CTATTTTATGCATTGGACCT+TGG - chr8_3:8281740-8281759 Msa1274520:intron 35.0%
GTCAATTCCTCCAAATTTGA+TGG - chr8_3:8281838-8281857 Msa1274520:CDS 35.0%
! ATTCCTCCAAATTTGATGGT+CGG - chr8_3:8281842-8281861 Msa1274520:CDS 35.0%
GGTCATGTTTCTCATACAAA+TGG + chr8_3:8281965-8281984 None:intergenic 35.0%
AAGCAAACATCCATTTCTTC+CGG - chr8_3:8282124-8282143 Msa1274520:CDS 35.0%
AACCTTATCAACTGGACAAA+AGG - chr8_3:8282148-8282167 Msa1274520:CDS 35.0%
CATCAAAGCAATTAGGATTC+TGG + chr8_3:8282199-8282218 None:intergenic 35.0%
!! GGAAAAGCATCAAAGCAATT+AGG + chr8_3:8282206-8282225 None:intergenic 35.0%
AGAAAAGCAATTGAGAGACA+AGG - chr8_3:8282311-8282330 Msa1274520:intron 35.0%
CAATAGGTCAATGATACAGT+CGG - chr8_3:8282470-8282489 Msa1274520:intron 35.0%
AATAGGTCAATGATACAGTC+GGG - chr8_3:8282471-8282490 Msa1274520:intron 35.0%
! TGACATCCTTGTTTGTATGT+CGG + chr8_3:8282511-8282530 None:intergenic 35.0%
!!! GTCATTGCTGCTGTTATTTT+AGG - chr8_3:8282527-8282546 Msa1274520:intron 35.0%
TCAATATATGCGACTGATGT+AGG - chr8_3:8282699-8282718 Msa1274520:intron 35.0%
ACTGATGTAGGTTATCAACA+TGG - chr8_3:8282711-8282730 Msa1274520:intron 35.0%
AGTCATACTCAGTTAATGGA+AGG + chr8_3:8282762-8282781 None:intergenic 35.0%
AATGTTACAATGCATGCAAG+TGG + chr8_3:8283073-8283092 None:intergenic 35.0%
ACCATAATAATTTGACGTGC+AGG - chr8_3:8283352-8283371 Msa1274520:intron 35.0%
TCCTGCACGTCAAATTATTA+TGG + chr8_3:8283356-8283375 None:intergenic 35.0%
TCCCATCAATGTTTCCAAAA+AGG - chr8_3:8283479-8283498 Msa1274520:intron 35.0%
!! GCCTTTTTGGAAACATTGAT+GGG + chr8_3:8283483-8283502 None:intergenic 35.0%
!! AGCCTTTTTGGAAACATTGA+TGG + chr8_3:8283484-8283503 None:intergenic 35.0%
! TTCACCAAGCAACTCTTTTA+TGG + chr8_3:8283825-8283844 None:intergenic 35.0%
! ATAAAAGAGTTGCTTGGTGA+AGG - chr8_3:8283824-8283843 Msa1274520:CDS 35.0%
ATCGTTGAACACTCAAATGA+TGG - chr8_3:8283863-8283882 Msa1274520:CDS 35.0%
GACATGCACACATATACTTT+AGG - chr8_3:8284029-8284048 Msa1274520:five_prime_UTR 35.0%
! ACCACCTTTCCCATCTTTTT+GGG + chr8_3:8280213-8280232 None:intergenic 40.0%
ACCAACGTTGAAACTGAAAC+AGG - chr8_3:8280368-8280387 Msa1274520:CDS 40.0%
ACCTGTTTCAGTTTCAACGT+TGG + chr8_3:8280372-8280391 None:intergenic 40.0%
!! AGGCTTTGAAACATGTACAC+CGG - chr8_3:8280651-8280670 Msa1274520:intron 40.0%
! CACCACTGGTATTTGAAACA+TGG - chr8_3:8280692-8280711 Msa1274520:intron 40.0%
GTCCATGTTTCAAATACCAG+TGG + chr8_3:8280697-8280716 None:intergenic 40.0%
! GGTATTTGAAACATGGACAC+CGG - chr8_3:8280699-8280718 Msa1274520:intron 40.0%
CATATGTGTCTGTGTCATGT+TGG - chr8_3:8280784-8280803 Msa1274520:CDS 40.0%
TCGATGCTAGAGAGTTATTG+AGG - chr8_3:8280837-8280856 Msa1274520:intron 40.0%
CACATCACTACTAACATGAG+TGG + chr8_3:8281375-8281394 None:intergenic 40.0%
CGAAGTTGCTAGTTGACAAT+TGG - chr8_3:8281518-8281537 Msa1274520:intron 40.0%
CTTTACATCCCTCTCTGTTT+AGG - chr8_3:8281705-8281724 Msa1274520:intron 40.0%
! TTTTATGCATTGGACCTTGG+AGG - chr8_3:8281743-8281762 Msa1274520:intron 40.0%
ATTTGGAGGAATTGACACCT+CGG + chr8_3:8281834-8281853 None:intergenic 40.0%
! TTCCTCCAAATTTGATGGTC+GGG - chr8_3:8281843-8281862 Msa1274520:CDS 40.0%
TTGCTTGACAGGAAAGGAAA+AGG + chr8_3:8282110-8282129 None:intergenic 40.0%
GAAATGGATGTTTGCTTGAC+AGG + chr8_3:8282121-8282140 None:intergenic 40.0%
AGCAAACATCCATTTCTTCC+GGG - chr8_3:8282125-8282144 Msa1274520:CDS 40.0%
!! AGCCTTTTGTCCAGTTGATA+AGG + chr8_3:8282153-8282172 None:intergenic 40.0%
! GCTTTGATGCTTTTCCTTTC+CGG - chr8_3:8282210-8282229 Msa1274520:intron 40.0%
AGGTGAAAGAATAACCGGAA+AGG + chr8_3:8282227-8282246 None:intergenic 40.0%
!! GTTGTTTACATAGGTTGGTC+AGG - chr8_3:8282271-8282290 Msa1274520:intron 40.0%
CGACTGTATCATTGACCTAT+TGG + chr8_3:8282472-8282491 None:intergenic 40.0%
!!! GCTGCTGTTATTTTAGGTAC+CGG - chr8_3:8282533-8282552 Msa1274520:intron 40.0%
GTGCTCAAGCAATACCAAAA+TGG - chr8_3:8282579-8282598 Msa1274520:intron 40.0%
CAAGCAATACCAAAATGGCA+CGG - chr8_3:8282584-8282603 Msa1274520:intron 40.0%
TGTAGGTTATCAACATGGAG+TGG - chr8_3:8282716-8282735 Msa1274520:intron 40.0%
GTAGGTTATCAACATGGAGT+GGG - chr8_3:8282717-8282736 Msa1274520:intron 40.0%
TAGGTTATCAACATGGAGTG+GGG - chr8_3:8282718-8282737 Msa1274520:intron 40.0%
CATGTATGGCCGAAAATTTC+AGG + chr8_3:8282882-8282901 None:intergenic 40.0%
ACAAAATGGCTGAAGAAGCT+TGG - chr8_3:8282963-8282982 Msa1274520:intron 40.0%
!!! GCTGAAGAAGCTTGGTTTTT+TGG - chr8_3:8282971-8282990 Msa1274520:intron 40.0%
!! CTCTAAGATCTCCTTCAGTT+TGG + chr8_3:8283436-8283455 None:intergenic 40.0%
CAAACTGAAGGAGATCTTAG+AGG - chr8_3:8283434-8283453 Msa1274520:intron 40.0%
CAAAAAGGAACGGAGTTAAG+CGG + chr8_3:8283567-8283586 None:intergenic 40.0%
AACCACCTTTCTCACTTCTA+GGG + chr8_3:8283621-8283640 None:intergenic 40.0%
! GTGGGAATTCTGAAGAAGTT+GGG - chr8_3:8283698-8283717 Msa1274520:intron 40.0%
GGAAAAGATACCATCACCAA+TGG - chr8_3:8283719-8283738 Msa1274520:CDS 40.0%
TCAGAAGAATGTGATAGCCA+TGG - chr8_3:8283748-8283767 Msa1274520:CDS 40.0%
AAGAATGTGATAGCCATGGA+TGG - chr8_3:8283752-8283771 Msa1274520:CDS 40.0%
GAACACTCAAATGATGGTTC+AGG - chr8_3:8283869-8283888 Msa1274520:CDS 40.0%
TCAAATGATGGTTCAGGAAC+TGG - chr8_3:8283875-8283894 Msa1274520:CDS 40.0%
TCAATCTTTCCTAGACTGCT+GGG + chr8_3:8284011-8284030 None:intergenic 40.0%
! ACCACCTTTCCCATCTTTTT+GGG + chr8_3:8280213-8280232 None:intergenic 40.0%
ACCAACGTTGAAACTGAAAC+AGG - chr8_3:8280368-8280387 Msa1274520:CDS 40.0%
ACCTGTTTCAGTTTCAACGT+TGG + chr8_3:8280372-8280391 None:intergenic 40.0%
!! AGGCTTTGAAACATGTACAC+CGG - chr8_3:8280651-8280670 Msa1274520:intron 40.0%
! CACCACTGGTATTTGAAACA+TGG - chr8_3:8280692-8280711 Msa1274520:intron 40.0%
GTCCATGTTTCAAATACCAG+TGG + chr8_3:8280697-8280716 None:intergenic 40.0%
! GGTATTTGAAACATGGACAC+CGG - chr8_3:8280699-8280718 Msa1274520:intron 40.0%
CATATGTGTCTGTGTCATGT+TGG - chr8_3:8280784-8280803 Msa1274520:CDS 40.0%
TCGATGCTAGAGAGTTATTG+AGG - chr8_3:8280837-8280856 Msa1274520:intron 40.0%
CACATCACTACTAACATGAG+TGG + chr8_3:8281375-8281394 None:intergenic 40.0%
CGAAGTTGCTAGTTGACAAT+TGG - chr8_3:8281518-8281537 Msa1274520:intron 40.0%
CTTTACATCCCTCTCTGTTT+AGG - chr8_3:8281705-8281724 Msa1274520:intron 40.0%
! TTTTATGCATTGGACCTTGG+AGG - chr8_3:8281743-8281762 Msa1274520:intron 40.0%
ATTTGGAGGAATTGACACCT+CGG + chr8_3:8281834-8281853 None:intergenic 40.0%
! TTCCTCCAAATTTGATGGTC+GGG - chr8_3:8281843-8281862 Msa1274520:CDS 40.0%
TTGCTTGACAGGAAAGGAAA+AGG + chr8_3:8282110-8282129 None:intergenic 40.0%
GAAATGGATGTTTGCTTGAC+AGG + chr8_3:8282121-8282140 None:intergenic 40.0%
AGCAAACATCCATTTCTTCC+GGG - chr8_3:8282125-8282144 Msa1274520:CDS 40.0%
!! AGCCTTTTGTCCAGTTGATA+AGG + chr8_3:8282153-8282172 None:intergenic 40.0%
! GCTTTGATGCTTTTCCTTTC+CGG - chr8_3:8282210-8282229 Msa1274520:intron 40.0%
AGGTGAAAGAATAACCGGAA+AGG + chr8_3:8282227-8282246 None:intergenic 40.0%
!! GTTGTTTACATAGGTTGGTC+AGG - chr8_3:8282271-8282290 Msa1274520:intron 40.0%
CGACTGTATCATTGACCTAT+TGG + chr8_3:8282472-8282491 None:intergenic 40.0%
!!! GCTGCTGTTATTTTAGGTAC+CGG - chr8_3:8282533-8282552 Msa1274520:intron 40.0%
GTGCTCAAGCAATACCAAAA+TGG - chr8_3:8282579-8282598 Msa1274520:intron 40.0%
CAAGCAATACCAAAATGGCA+CGG - chr8_3:8282584-8282603 Msa1274520:intron 40.0%
TGTAGGTTATCAACATGGAG+TGG - chr8_3:8282716-8282735 Msa1274520:intron 40.0%
GTAGGTTATCAACATGGAGT+GGG - chr8_3:8282717-8282736 Msa1274520:intron 40.0%
TAGGTTATCAACATGGAGTG+GGG - chr8_3:8282718-8282737 Msa1274520:intron 40.0%
CATGTATGGCCGAAAATTTC+AGG + chr8_3:8282882-8282901 None:intergenic 40.0%
ACAAAATGGCTGAAGAAGCT+TGG - chr8_3:8282963-8282982 Msa1274520:intron 40.0%
!!! GCTGAAGAAGCTTGGTTTTT+TGG - chr8_3:8282971-8282990 Msa1274520:intron 40.0%
!! CTCTAAGATCTCCTTCAGTT+TGG + chr8_3:8283436-8283455 None:intergenic 40.0%
CAAACTGAAGGAGATCTTAG+AGG - chr8_3:8283434-8283453 Msa1274520:intron 40.0%
CAAAAAGGAACGGAGTTAAG+CGG + chr8_3:8283567-8283586 None:intergenic 40.0%
AACCACCTTTCTCACTTCTA+GGG + chr8_3:8283621-8283640 None:intergenic 40.0%
! GTGGGAATTCTGAAGAAGTT+GGG - chr8_3:8283698-8283717 Msa1274520:intron 40.0%
GGAAAAGATACCATCACCAA+TGG - chr8_3:8283719-8283738 Msa1274520:CDS 40.0%
TCAGAAGAATGTGATAGCCA+TGG - chr8_3:8283748-8283767 Msa1274520:CDS 40.0%
AAGAATGTGATAGCCATGGA+TGG - chr8_3:8283752-8283771 Msa1274520:CDS 40.0%
GAACACTCAAATGATGGTTC+AGG - chr8_3:8283869-8283888 Msa1274520:CDS 40.0%
TCAAATGATGGTTCAGGAAC+TGG - chr8_3:8283875-8283894 Msa1274520:CDS 40.0%
TCAATCTTTCCTAGACTGCT+GGG + chr8_3:8284011-8284030 None:intergenic 40.0%
ACCCAAAAAGATGGGAAAGG+TGG - chr8_3:8280209-8280228 Msa1274520:three_prime_UTR 45.0%
! CACCACCTTTCCCATCTTTT+TGG + chr8_3:8280214-8280233 None:intergenic 45.0%
CAAAAAGATGGGAAAGGTGG+TGG - chr8_3:8280212-8280231 Msa1274520:three_prime_UTR 45.0%
ACGTGAAGAAATCGAAGCGA+TGG - chr8_3:8280298-8280317 Msa1274520:CDS 45.0%
CGTGAAGAAATCGAAGCGAT+GGG - chr8_3:8280299-8280318 Msa1274520:CDS 45.0%
GTGAAGAAATCGAAGCGATG+GGG - chr8_3:8280300-8280319 Msa1274520:CDS 45.0%
ACAGGTTGCTGATGCAATGA+CGG - chr8_3:8280386-8280405 Msa1274520:CDS 45.0%
! TTCGTATAGCCGATTCCACT+TGG - chr8_3:8280621-8280640 Msa1274520:intron 45.0%
! TATAGCCGATTCCACTTGGT+GGG - chr8_3:8280625-8280644 Msa1274520:intron 45.0%
CTTATCCCACCAAGTGGAAT+CGG + chr8_3:8280633-8280652 None:intergenic 45.0%
! GACTTGTTTAGTGTCGTGTC+CGG + chr8_3:8280721-8280740 None:intergenic 45.0%
GACACTAAACAAGTCACCAC+TGG - chr8_3:8280726-8280745 Msa1274520:intron 45.0%
TCCTCGTTCCTAAACAGAGA+GGG + chr8_3:8281716-8281735 None:intergenic 45.0%
TTCCTCGTTCCTAAACAGAG+AGG + chr8_3:8281717-8281736 None:intergenic 45.0%
TCTCTGTTTAGGAACGAGGA+AGG - chr8_3:8281716-8281735 Msa1274520:intron 45.0%
CACGAAAGTTAGTTCCTCCA+AGG + chr8_3:8281760-8281779 None:intergenic 45.0%
CGTGTATTACGTGTGCAACT+TGG - chr8_3:8281776-8281795 Msa1274520:intron 45.0%
GTATTACGTGTGCAACTTGG+TGG - chr8_3:8281779-8281798 Msa1274520:intron 45.0%
TGTCAGTCGAGAATTTACCG+AGG - chr8_3:8281814-8281833 Msa1274520:intron 45.0%
GATGTCCCGACCATCAAATT+TGG + chr8_3:8281851-8281870 None:intergenic 45.0%
GAAGATTTCAAGGTTCCTCC+AGG - chr8_3:8282061-8282080 Msa1274520:CDS 45.0%
GGATGTTTGCTTGACAGGAA+AGG + chr8_3:8282116-8282135 None:intergenic 45.0%
GATAAGGTTCCCGGAAGAAA+TGG + chr8_3:8282137-8282156 None:intergenic 45.0%
!! TGTCCAGTTGATAAGGTTCC+CGG + chr8_3:8282146-8282165 None:intergenic 45.0%
!! ATAGGTTGGTCAGGATGTTG+TGG - chr8_3:8282280-8282299 Msa1274520:intron 45.0%
TTTGCCCAAGTCTGGAGAAA+TGG - chr8_3:8282610-8282629 Msa1274520:intron 45.0%
CTCACCATTTCTCCAGACTT+GGG + chr8_3:8282617-8282636 None:intergenic 45.0%
ACTCACCATTTCTCCAGACT+TGG + chr8_3:8282618-8282637 None:intergenic 45.0%
! TTAATGGAAGGTGCGATGAC+CGG + chr8_3:8282750-8282769 None:intergenic 45.0%
GATGCTGAGAGTTTAAACCC+TGG - chr8_3:8282790-8282809 Msa1274520:intron 45.0%
GAGTTTAAACCCTGGTGAAC+AGG - chr8_3:8282798-8282817 Msa1274520:intron 45.0%
GCAATTGTACCTGTTCACCA+GGG + chr8_3:8282810-8282829 None:intergenic 45.0%
TTTGACCACGTTGAGATCAG+CGG + chr8_3:8283412-8283431 None:intergenic 45.0%
CGTGGTCAAAACCAAACTGA+AGG - chr8_3:8283422-8283441 Msa1274520:intron 45.0%
TACCTCCCTAGAAGTGAGAA+AGG - chr8_3:8283613-8283632 Msa1274520:intron 45.0%
CAACCACCTTTCTCACTTCT+AGG + chr8_3:8283622-8283641 None:intergenic 45.0%
TGCAATATTGTTGCTACCCG+TGG - chr8_3:8283650-8283669 Msa1274520:intron 45.0%
! CGTGGGAATTCTGAAGAAGT+TGG - chr8_3:8283697-8283716 Msa1274520:intron 45.0%
AATGTGATAGCCATGGATGG+CGG - chr8_3:8283755-8283774 Msa1274520:CDS 45.0%
! GTTGCTTGGTGAAGGTGTAT+CGG - chr8_3:8283832-8283851 Msa1274520:CDS 45.0%
TAGACTGCTGGGGTCAAAAT+TGG + chr8_3:8284000-8284019 None:intergenic 45.0%
!! AATTTTGACCCCAGCAGTCT+AGG - chr8_3:8283999-8284018 Msa1274520:five_prime_UTR 45.0%
CAATCTTTCCTAGACTGCTG+GGG + chr8_3:8284010-8284029 None:intergenic 45.0%
GTCAATCTTTCCTAGACTGC+TGG + chr8_3:8284012-8284031 None:intergenic 45.0%
ACCCAAAAAGATGGGAAAGG+TGG - chr8_3:8280209-8280228 Msa1274520:three_prime_UTR 45.0%
! CACCACCTTTCCCATCTTTT+TGG + chr8_3:8280214-8280233 None:intergenic 45.0%
CAAAAAGATGGGAAAGGTGG+TGG - chr8_3:8280212-8280231 Msa1274520:three_prime_UTR 45.0%
ACGTGAAGAAATCGAAGCGA+TGG - chr8_3:8280298-8280317 Msa1274520:CDS 45.0%
CGTGAAGAAATCGAAGCGAT+GGG - chr8_3:8280299-8280318 Msa1274520:CDS 45.0%
GTGAAGAAATCGAAGCGATG+GGG - chr8_3:8280300-8280319 Msa1274520:CDS 45.0%
ACAGGTTGCTGATGCAATGA+CGG - chr8_3:8280386-8280405 Msa1274520:CDS 45.0%
! TTCGTATAGCCGATTCCACT+TGG - chr8_3:8280621-8280640 Msa1274520:intron 45.0%
! TATAGCCGATTCCACTTGGT+GGG - chr8_3:8280625-8280644 Msa1274520:intron 45.0%
CTTATCCCACCAAGTGGAAT+CGG + chr8_3:8280633-8280652 None:intergenic 45.0%
! GACTTGTTTAGTGTCGTGTC+CGG + chr8_3:8280721-8280740 None:intergenic 45.0%
GACACTAAACAAGTCACCAC+TGG - chr8_3:8280726-8280745 Msa1274520:intron 45.0%
TCCTCGTTCCTAAACAGAGA+GGG + chr8_3:8281716-8281735 None:intergenic 45.0%
TTCCTCGTTCCTAAACAGAG+AGG + chr8_3:8281717-8281736 None:intergenic 45.0%
TCTCTGTTTAGGAACGAGGA+AGG - chr8_3:8281716-8281735 Msa1274520:intron 45.0%
CACGAAAGTTAGTTCCTCCA+AGG + chr8_3:8281760-8281779 None:intergenic 45.0%
CGTGTATTACGTGTGCAACT+TGG - chr8_3:8281776-8281795 Msa1274520:intron 45.0%
GTATTACGTGTGCAACTTGG+TGG - chr8_3:8281779-8281798 Msa1274520:intron 45.0%
TGTCAGTCGAGAATTTACCG+AGG - chr8_3:8281814-8281833 Msa1274520:intron 45.0%
GATGTCCCGACCATCAAATT+TGG + chr8_3:8281851-8281870 None:intergenic 45.0%
GAAGATTTCAAGGTTCCTCC+AGG - chr8_3:8282061-8282080 Msa1274520:CDS 45.0%
GGATGTTTGCTTGACAGGAA+AGG + chr8_3:8282116-8282135 None:intergenic 45.0%
GATAAGGTTCCCGGAAGAAA+TGG + chr8_3:8282137-8282156 None:intergenic 45.0%
!! TGTCCAGTTGATAAGGTTCC+CGG + chr8_3:8282146-8282165 None:intergenic 45.0%
!! ATAGGTTGGTCAGGATGTTG+TGG - chr8_3:8282280-8282299 Msa1274520:intron 45.0%
TTTGCCCAAGTCTGGAGAAA+TGG - chr8_3:8282610-8282629 Msa1274520:intron 45.0%
CTCACCATTTCTCCAGACTT+GGG + chr8_3:8282617-8282636 None:intergenic 45.0%
ACTCACCATTTCTCCAGACT+TGG + chr8_3:8282618-8282637 None:intergenic 45.0%
! TTAATGGAAGGTGCGATGAC+CGG + chr8_3:8282750-8282769 None:intergenic 45.0%
GATGCTGAGAGTTTAAACCC+TGG - chr8_3:8282790-8282809 Msa1274520:intron 45.0%
GAGTTTAAACCCTGGTGAAC+AGG - chr8_3:8282798-8282817 Msa1274520:intron 45.0%
GCAATTGTACCTGTTCACCA+GGG + chr8_3:8282810-8282829 None:intergenic 45.0%
TTTGACCACGTTGAGATCAG+CGG + chr8_3:8283412-8283431 None:intergenic 45.0%
CGTGGTCAAAACCAAACTGA+AGG - chr8_3:8283422-8283441 Msa1274520:intron 45.0%
TACCTCCCTAGAAGTGAGAA+AGG - chr8_3:8283613-8283632 Msa1274520:intron 45.0%
CAACCACCTTTCTCACTTCT+AGG + chr8_3:8283622-8283641 None:intergenic 45.0%
TGCAATATTGTTGCTACCCG+TGG - chr8_3:8283650-8283669 Msa1274520:intron 45.0%
! CGTGGGAATTCTGAAGAAGT+TGG - chr8_3:8283697-8283716 Msa1274520:intron 45.0%
AATGTGATAGCCATGGATGG+CGG - chr8_3:8283755-8283774 Msa1274520:CDS 45.0%
! GTTGCTTGGTGAAGGTGTAT+CGG - chr8_3:8283832-8283851 Msa1274520:CDS 45.0%
TAGACTGCTGGGGTCAAAAT+TGG + chr8_3:8284000-8284019 None:intergenic 45.0%
!! AATTTTGACCCCAGCAGTCT+AGG - chr8_3:8283999-8284018 Msa1274520:five_prime_UTR 45.0%
CAATCTTTCCTAGACTGCTG+GGG + chr8_3:8284010-8284029 None:intergenic 45.0%
GTCAATCTTTCCTAGACTGC+TGG + chr8_3:8284012-8284031 None:intergenic 45.0%
!!! TTTAAAATTTCTATAAAAAA+AGG - chr8_3:8280975-8280994 Msa1274520:intron 5.0%
!! TTAAAATTTCTATAAAAAAA+GGG - chr8_3:8280976-8280995 Msa1274520:intron 5.0%
!!! TTTAAAATTTCTATAAAAAA+AGG - chr8_3:8280975-8280994 Msa1274520:intron 5.0%
!! TTAAAATTTCTATAAAAAAA+GGG - chr8_3:8280976-8280995 Msa1274520:intron 5.0%
GTGAGTGTGCGTGTGTACTT+TGG - chr8_3:8280149-8280168 Msa1274520:three_prime_UTR 50.0%
! GTATAGCCGATTCCACTTGG+TGG - chr8_3:8280624-8280643 Msa1274520:intron 50.0%
! CGATTCCACTTGGTGGGATA+AGG - chr8_3:8280631-8280650 Msa1274520:intron 50.0%
! CAAAGCCTTATCCCACCAAG+TGG + chr8_3:8280639-8280658 None:intergenic 50.0%
GACGTGTTTAGTGTCGTGTC+CGG + chr8_3:8280673-8280692 None:intergenic 50.0%
GACACTAAACACGTCACCAC+TGG - chr8_3:8280678-8280697 Msa1274520:intron 50.0%
TCCCTCTCTGTTTAGGAACG+AGG - chr8_3:8281712-8281731 Msa1274520:intron 50.0%
GTCCCGACCATCAAATTTGG+AGG + chr8_3:8281848-8281867 None:intergenic 50.0%
AGGTTCCTCCAGGTAGAAAG+AGG - chr8_3:8282071-8282090 Msa1274520:CDS 50.0%
GGTTCCTCCAGGTAGAAAGA+GGG - chr8_3:8282072-8282091 Msa1274520:CDS 50.0%
CTTCCGGGAACCTTATCAAC+TGG - chr8_3:8282140-8282159 Msa1274520:CDS 50.0%
GATACAGTCGGGACATTAGC+TGG - chr8_3:8282482-8282501 Msa1274520:intron 50.0%
TGGAGGCCGACATACAAACA+AGG - chr8_3:8282502-8282521 Msa1274520:intron 50.0%
CACGTACGCTGCATTTGTTC+CGG + chr8_3:8282555-8282574 None:intergenic 50.0%
!!! GGCAAATCACCGTGCCATTT+TGG + chr8_3:8282596-8282615 None:intergenic 50.0%
ACATGGAGTGGGGAAACTTC+CGG - chr8_3:8282728-8282747 Msa1274520:intron 50.0%
CGCAATTGTACCTGTTCACC+AGG + chr8_3:8282811-8282830 None:intergenic 50.0%
ACAATGCATGCAAGTGGCAG+AGG + chr8_3:8283067-8283086 None:intergenic 50.0%
TGATGCATGGCAGACATGTC+AGG + chr8_3:8283381-8283400 None:intergenic 50.0%
! CACCTTTCTCACTTCTAGGG+AGG + chr8_3:8283618-8283637 None:intergenic 50.0%
CTCCCTAGAAGTGAGAAAGG+TGG - chr8_3:8283616-8283635 Msa1274520:intron 50.0%
TCTTTCTGCAGCTGGTATCG+TGG - chr8_3:8283679-8283698 Msa1274520:intron 50.0%
CTTTCTGCAGCTGGTATCGT+GGG - chr8_3:8283680-8283699 Msa1274520:intron 50.0%
AGATACCATCACCAATGGCG+AGG - chr8_3:8283724-8283743 Msa1274520:CDS 50.0%
GATACCATCACCAATGGCGA+GGG - chr8_3:8283725-8283744 Msa1274520:CDS 50.0%
ATTCTTCTGACCCTCGCCAT+TGG + chr8_3:8283738-8283757 None:intergenic 50.0%
CTCATATAGTCCGCCATCCA+TGG + chr8_3:8283768-8283787 None:intergenic 50.0%
GTGAGTGTGCGTGTGTACTT+TGG - chr8_3:8280149-8280168 Msa1274520:three_prime_UTR 50.0%
! GTATAGCCGATTCCACTTGG+TGG - chr8_3:8280624-8280643 Msa1274520:intron 50.0%
! CGATTCCACTTGGTGGGATA+AGG - chr8_3:8280631-8280650 Msa1274520:intron 50.0%
! CAAAGCCTTATCCCACCAAG+TGG + chr8_3:8280639-8280658 None:intergenic 50.0%
GACGTGTTTAGTGTCGTGTC+CGG + chr8_3:8280673-8280692 None:intergenic 50.0%
GACACTAAACACGTCACCAC+TGG - chr8_3:8280678-8280697 Msa1274520:intron 50.0%
TCCCTCTCTGTTTAGGAACG+AGG - chr8_3:8281712-8281731 Msa1274520:intron 50.0%
GTCCCGACCATCAAATTTGG+AGG + chr8_3:8281848-8281867 None:intergenic 50.0%
AGGTTCCTCCAGGTAGAAAG+AGG - chr8_3:8282071-8282090 Msa1274520:CDS 50.0%
GGTTCCTCCAGGTAGAAAGA+GGG - chr8_3:8282072-8282091 Msa1274520:CDS 50.0%
CTTCCGGGAACCTTATCAAC+TGG - chr8_3:8282140-8282159 Msa1274520:CDS 50.0%
GATACAGTCGGGACATTAGC+TGG - chr8_3:8282482-8282501 Msa1274520:intron 50.0%
TGGAGGCCGACATACAAACA+AGG - chr8_3:8282502-8282521 Msa1274520:intron 50.0%
CACGTACGCTGCATTTGTTC+CGG + chr8_3:8282555-8282574 None:intergenic 50.0%
!!! GGCAAATCACCGTGCCATTT+TGG + chr8_3:8282596-8282615 None:intergenic 50.0%
ACATGGAGTGGGGAAACTTC+CGG - chr8_3:8282728-8282747 Msa1274520:intron 50.0%
CGCAATTGTACCTGTTCACC+AGG + chr8_3:8282811-8282830 None:intergenic 50.0%
ACAATGCATGCAAGTGGCAG+AGG + chr8_3:8283067-8283086 None:intergenic 50.0%
TGATGCATGGCAGACATGTC+AGG + chr8_3:8283381-8283400 None:intergenic 50.0%
! CACCTTTCTCACTTCTAGGG+AGG + chr8_3:8283618-8283637 None:intergenic 50.0%
CTCCCTAGAAGTGAGAAAGG+TGG - chr8_3:8283616-8283635 Msa1274520:intron 50.0%
TCTTTCTGCAGCTGGTATCG+TGG - chr8_3:8283679-8283698 Msa1274520:intron 50.0%
CTTTCTGCAGCTGGTATCGT+GGG - chr8_3:8283680-8283699 Msa1274520:intron 50.0%
AGATACCATCACCAATGGCG+AGG - chr8_3:8283724-8283743 Msa1274520:CDS 50.0%
GATACCATCACCAATGGCGA+GGG - chr8_3:8283725-8283744 Msa1274520:CDS 50.0%
ATTCTTCTGACCCTCGCCAT+TGG + chr8_3:8283738-8283757 None:intergenic 50.0%
CTCATATAGTCCGCCATCCA+TGG + chr8_3:8283768-8283787 None:intergenic 50.0%
TGCGACGGTGATAGGAGCAA+CGG - chr8_3:8280239-8280258 Msa1274520:exon 55.0%
GGTTGCTGATGCAATGACGG+TGG - chr8_3:8280389-8280408 Msa1274520:CDS 55.0%
!! CACGCTGGTCTTGCTTCTGA+TGG - chr8_3:8280417-8280436 Msa1274520:CDS 55.0%
!! GCTGGTCTTGCTTCTGATGG+TGG - chr8_3:8280420-8280439 Msa1274520:CDS 55.0%
! ACGTGTGCAACTTGGTGGCA+AGG - chr8_3:8281784-8281803 Msa1274520:intron 55.0%
! GTGCAACTTGGTGGCAAGGA+TGG - chr8_3:8281788-8281807 Msa1274520:intron 55.0%
AGCTCCCTCTTTCTACCTGG+AGG + chr8_3:8282079-8282098 None:intergenic 55.0%
CCTAGCTCCCTCTTTCTACC+TGG + chr8_3:8282082-8282101 None:intergenic 55.0%
CCAGGTAGAAAGAGGGAGCT+AGG - chr8_3:8282079-8282098 Msa1274520:CDS 55.0%
ACAGTCGGGACATTAGCTGG+AGG - chr8_3:8282485-8282504 Msa1274520:intron 55.0%
CGGAACAAATGCAGCGTACG+TGG - chr8_3:8282553-8282572 Msa1274520:intron 55.0%
! CACGGTGATTTGCCCAAGTC+TGG - chr8_3:8282602-8282621 Msa1274520:intron 55.0%
GGCAGAGGAGCTAGCAGAAA+AGG + chr8_3:8283052-8283071 None:intergenic 55.0%
AGCGGACGAGTCATGATGCA+TGG + chr8_3:8283394-8283413 None:intergenic 55.0%
TGCAGAAAGACGAGCACCAC+GGG + chr8_3:8283669-8283688 None:intergenic 55.0%
CTGCAGAAAGACGAGCACCA+CGG + chr8_3:8283670-8283689 None:intergenic 55.0%
TGCGACGGTGATAGGAGCAA+CGG - chr8_3:8280239-8280258 Msa1274520:exon 55.0%
GGTTGCTGATGCAATGACGG+TGG - chr8_3:8280389-8280408 Msa1274520:CDS 55.0%
!! CACGCTGGTCTTGCTTCTGA+TGG - chr8_3:8280417-8280436 Msa1274520:CDS 55.0%
!! GCTGGTCTTGCTTCTGATGG+TGG - chr8_3:8280420-8280439 Msa1274520:CDS 55.0%
! ACGTGTGCAACTTGGTGGCA+AGG - chr8_3:8281784-8281803 Msa1274520:intron 55.0%
! GTGCAACTTGGTGGCAAGGA+TGG - chr8_3:8281788-8281807 Msa1274520:intron 55.0%
AGCTCCCTCTTTCTACCTGG+AGG + chr8_3:8282079-8282098 None:intergenic 55.0%
CCTAGCTCCCTCTTTCTACC+TGG + chr8_3:8282082-8282101 None:intergenic 55.0%
CCAGGTAGAAAGAGGGAGCT+AGG - chr8_3:8282079-8282098 Msa1274520:CDS 55.0%
ACAGTCGGGACATTAGCTGG+AGG - chr8_3:8282485-8282504 Msa1274520:intron 55.0%
CGGAACAAATGCAGCGTACG+TGG - chr8_3:8282553-8282572 Msa1274520:intron 55.0%
! CACGGTGATTTGCCCAAGTC+TGG - chr8_3:8282602-8282621 Msa1274520:intron 55.0%
GGCAGAGGAGCTAGCAGAAA+AGG + chr8_3:8283052-8283071 None:intergenic 55.0%
AGCGGACGAGTCATGATGCA+TGG + chr8_3:8283394-8283413 None:intergenic 55.0%
TGCAGAAAGACGAGCACCAC+GGG + chr8_3:8283669-8283688 None:intergenic 55.0%
CTGCAGAAAGACGAGCACCA+CGG + chr8_3:8283670-8283689 None:intergenic 55.0%
! AAAGGTGGTGGCGTGTGCGA+CGG - chr8_3:8280224-8280243 Msa1274520:three_prime_UTR 60.0%
GACGGTGATAGGAGCAACGG+CGG - chr8_3:8280242-8280261 Msa1274520:exon 60.0%
ATGACGGTGGAGATGCACGC+TGG - chr8_3:8280402-8280421 Msa1274520:CDS 60.0%
CTCGTCCGCTGATCTCAACG+TGG - chr8_3:8283404-8283423 Msa1274520:intron 60.0%
GGTGCTCGTCTTTCTGCAGC+TGG - chr8_3:8283671-8283690 Msa1274520:intron 60.0%
CTGACCCTCGCCATTGGTGA+TGG + chr8_3:8283732-8283751 None:intergenic 60.0%
! AAAGGTGGTGGCGTGTGCGA+CGG - chr8_3:8280224-8280243 Msa1274520:three_prime_UTR 60.0%
GACGGTGATAGGAGCAACGG+CGG - chr8_3:8280242-8280261 Msa1274520:exon 60.0%
ATGACGGTGGAGATGCACGC+TGG - chr8_3:8280402-8280421 Msa1274520:CDS 60.0%
CTCGTCCGCTGATCTCAACG+TGG - chr8_3:8283404-8283423 Msa1274520:intron 60.0%
GGTGCTCGTCTTTCTGCAGC+TGG - chr8_3:8283671-8283690 Msa1274520:intron 60.0%
CTGACCCTCGCCATTGGTGA+TGG + chr8_3:8283732-8283751 None:intergenic 60.0%
GTGGCGTGTGCGACGGTGAT+AGG - chr8_3:8280231-8280250 Msa1274520:three_prime_UTR 65.0%
GTGGCGTGTGCGACGGTGAT+AGG - chr8_3:8280231-8280250 Msa1274520:three_prime_UTR 65.0%
AGGAGCAACGGCGGCGTGTG+TGG - chr8_3:8280251-8280270 Msa1274520:exon 70.0%
AGCAACGGCGGCGTGTGTGG+TGG - chr8_3:8280254-8280273 Msa1274520:CDS 70.0%
AGGAGCAACGGCGGCGTGTG+TGG - chr8_3:8280251-8280270 Msa1274520:exon 70.0%
AGCAACGGCGGCGTGTGTGG+TGG - chr8_3:8280254-8280273 Msa1274520:CDS 70.0%
! GGCGGCGTGTGTGGTGGCGA+CGG - chr8_3:8280260-8280279 Msa1274520:CDS 75.0%
! GGCGGCGTGTGTGGTGGCGA+CGG - chr8_3:8280260-8280279 Msa1274520:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 8280041 8284154 8280041 ID=Msa1274520;Name=Msa1274520
chr8_3 mRNA 8280041 8284154 8280041 ID=Msa1274520-mRNA-1;Parent=Msa1274520;Name=Msa1274520-mRNA-1;_AED=0.11;_eAED=0.11;_QI=178|1|1|1|1|1|9|211|494
chr8_3 exon 8280041 8280590 8280041 ID=Msa1274520-mRNA-1:exon:3360;Parent=Msa1274520-mRNA-1
chr8_3 exon 8280740 8280821 8280740 ID=Msa1274520-mRNA-1:exon:3359;Parent=Msa1274520-mRNA-1
chr8_3 exon 8281160 8281290 8281160 ID=Msa1274520-mRNA-1:exon:3358;Parent=Msa1274520-mRNA-1
chr8_3 exon 8281376 8281474 8281376 ID=Msa1274520-mRNA-1:exon:3357;Parent=Msa1274520-mRNA-1
chr8_3 exon 8281564 8281719 8281564 ID=Msa1274520-mRNA-1:exon:3356;Parent=Msa1274520-mRNA-1
chr8_3 exon 8281837 8281911 8281837 ID=Msa1274520-mRNA-1:exon:3355;Parent=Msa1274520-mRNA-1
chr8_3 exon 8282006 8282188 8282006 ID=Msa1274520-mRNA-1:exon:3354;Parent=Msa1274520-mRNA-1
chr8_3 exon 8282321 8282468 8282321 ID=Msa1274520-mRNA-1:exon:3353;Parent=Msa1274520-mRNA-1
chr8_3 exon 8283705 8284154 8283705 ID=Msa1274520-mRNA-1:exon:3352;Parent=Msa1274520-mRNA-1
chr8_3 five_prime_UTR 8283977 8284154 8283977 ID=Msa1274520-mRNA-1:five_prime_utr;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8283705 8283976 8283705 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8282321 8282468 8282321 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8282006 8282188 8282006 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8281837 8281911 8281837 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8281564 8281719 8281564 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8281376 8281474 8281376 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8281160 8281290 8281160 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8280740 8280821 8280740 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 CDS 8280252 8280590 8280252 ID=Msa1274520-mRNA-1:cds;Parent=Msa1274520-mRNA-1
chr8_3 three_prime_UTR 8280041 8280251 8280041 ID=Msa1274520-mRNA-1:three_prime_utr;Parent=Msa1274520-mRNA-1
Gene Sequence

>Msa1274520

ATGGGAAAGGTGGTGGCGTGTGCGACGGTGATAGGAGCAACGGCGGCGTGTGTGGTGGCGACGGTGTTGATTCATCGTTACGTGAAGAAATCGAAGCGATGGGGAAAAGCAATAGCGATATTGAAGGAATTTGAAGAGAAGTGTGCGACACCAACGTTGAAACTGAAACAGGTTGCTGATGCAATGACGGTGGAGATGCACGCTGGTCTTGCTTCTGATGGTGGTAGTAAGCTCAAAATGCTTATCAGTTTCGTTGATAATCTTCCTACAGGGAACGAGGAAGGACTATTTTATGCATTGGACCTTGGAGGAACTAACTTTCGTGTATTACGTGTGCAACTTGGTGGCAAGGATGGTGTTGTCAGTCGAGAATTTACCGAGGTGTCAATTCCTCCAAATTTGATGGTCGGGACATCACATGAACTCTTTGACTATATTGCAGCAGAACTTTCAAAGTTTGTTAATGAAGAAAGTGAAGATTTCAAGGTTCCTCCAGGTAGAAAGAGGGAGCTAGGTTTTACCTTTTCCTTTCCTGTCAAGCAAACATCCATTTCTTCCGGGAACCTTATCAACTGGACAAAAGGCTTCAAGATCGATGATGCAGTTGGTCAGGATGTTGTGGCTGAATTGAGAAAAGCAATTGAGAGACAAGGTCTTGATATGAACATAACAGCTTTGGTCAATGATACAGTCGGGACATTAGCTGGAGGCCGACATACAAACAAGGATGTCATTGCTGCTGTTATTTTAGGTACCGGAACAAATGCAGCGTACGTGGAGAGTGCTCAAGCAATACCAAAATGGCACGGTGATTTGCCCAAGTCTGGAGAAATGGTTATCAACATGGAGTGGGGAAACTTCCGGTCATCGCACCTTCCATTAACTGAGTATGACTATTCATTAGATGCTGAGAGTTTAAACCCTGGTGAACAGACTTTTGAGAAGATAATTTCTGGAATGTATTTGGGAGAAATTGTTCGTAGAGTACTATACAAAATGGCTGAAGAAGCTTGGTTTTTTGGTGAAACCATTCCTTCAAAACTGAAAGTTCCATTCATATTAAGGACACCTGACATGTCTGCCATGCATCATGACTCGTCCGCTGATCTCAACGTGGTCAAAACCAAACTGAAGGAGATCTTAGAGATATCTGATACCTCCCTAGAAGTGAGAAAGGTGGTTGTTGCATTGTGCAATATTGTTGCTACCCGTGGTGCTCGTCTTTCTGCAGCTGGTATCGTGGGAATTCTGAAGAAGTTGGGAAAAGATACCATCACCAATGGCGAGGGTCAGAAGAATGTGATAGCCATGGATGGCGGACTATATGAGCATTACACTGAATACAGAAAGTGCTTAGAGAATACCATAAAAGAGTTGCTTGGTGAAGGTGTATCGGATAGTGTTATCGTTGAACACTCAAATGATGGTTCAGGAACTGGTGCTGCACTTCTTGCTGCTTCTCATTCTTATTACCTTGATGGTTAG

Protein sequence

>Msa1274520

MGKVVACATVIGATAACVVATVLIHRYVKKSKRWGKAIAILKEFEEKCATPTLKLKQVADAMTVEMHAGLASDGGSKLKMLISFVDNLPTGNEEGLFYALDLGGTNFRVLRVQLGGKDGVVSREFTEVSIPPNLMVGTSHELFDYIAAELSKFVNEESEDFKVPPGRKRELGFTFSFPVKQTSISSGNLINWTKGFKIDDAVGQDVVAELRKAIERQGLDMNITALVNDTVGTLAGGRHTNKDVIAAVILGTGTNAAYVESAQAIPKWHGDLPKSGEMVINMEWGNFRSSHLPLTEYDYSLDAESLNPGEQTFEKIISGMYLGEIVRRVLYKMAEEAWFFGETIPSKLKVPFILRTPDMSAMHHDSSADLNVVKTKLKEILEISDTSLEVRKVVVALCNIVATRGARLSAAGIVGILKKLGKDTITNGEGQKNVIAMDGGLYEHYTEYRKCLENTIKELLGEGVSDSVIVEHSNDGSGTGAALLAASHSYYLDG*