Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0590260 | XP_013454888.1 | 91.919 | 198 | 12 | 1 | 1 | 198 | 1 | 194 | 4.28e-112 | 328 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0590260 | sp|Q8LDV3|Y4320_ARATH | 73.750 | 80 | 19 | 1 | 69 | 148 | 65 | 142 | 7.94e-34 | 122 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007570 | Msa0590260 | 0.824805 | 6.616528e-54 | -8.615850e-47 |
Msa0024900 | Msa0590260 | 0.805492 | 1.300412e-49 | -8.615850e-47 |
Msa0027030 | Msa0590260 | 0.825392 | 4.806467e-54 | -8.615850e-47 |
Msa0028940 | Msa0590260 | 0.804417 | 2.182394e-49 | -8.615850e-47 |
Msa0029280 | Msa0590260 | 0.822952 | 1.798716e-53 | -8.615850e-47 |
Msa0032990 | Msa0590260 | 0.818226 | 2.188843e-52 | -8.615850e-47 |
Msa0033190 | Msa0590260 | 0.803512 | 3.364811e-49 | -8.615850e-47 |
Msa0034100 | Msa0590260 | 0.802372 | 5.787650e-49 | -8.615850e-47 |
Msa0038750 | Msa0590260 | 0.823299 | 1.492303e-53 | -8.615850e-47 |
Msa0039590 | Msa0590260 | 0.803053 | 4.187890e-49 | -8.615850e-47 |
Msa0040780 | Msa0590260 | 0.811138 | 8.132507e-51 | -8.615850e-47 |
Msa0074220 | Msa0590260 | 0.822362 | 2.466518e-53 | -8.615850e-47 |
Msa0079840 | Msa0590260 | 0.801940 | 7.101857e-49 | -8.615850e-47 |
Msa0081840 | Msa0590260 | 0.804928 | 1.707096e-49 | -8.615850e-47 |
Msa0088670 | Msa0590260 | 0.805699 | 1.177005e-49 | -8.615850e-47 |
Msa0094900 | Msa0590260 | 0.820179 | 7.865818e-53 | -8.615850e-47 |
Msa0094990 | Msa0590260 | 0.840367 | 9.077028e-58 | -8.615850e-47 |
Msa0105590 | Msa0590260 | 0.805139 | 1.541681e-49 | -8.615850e-47 |
Msa0114700 | Msa0590260 | 0.803975 | 2.696922e-49 | -8.615850e-47 |
Msa0116200 | Msa0590260 | 0.838646 | 2.541366e-57 | -8.615850e-47 |
Msa0120320 | Msa0590260 | 0.830802 | 2.391862e-55 | -8.615850e-47 |
Msa0124460 | Msa0590260 | 0.808176 | 3.521907e-50 | -8.615850e-47 |
Msa0127110 | Msa0590260 | 0.801901 | 7.235096e-49 | -8.615850e-47 |
Msa0128070 | Msa0590260 | 0.810579 | 1.074627e-50 | -8.615850e-47 |
Msa0128110 | Msa0590260 | 0.806724 | 7.159366e-50 | -8.615850e-47 |
Msa0130070 | Msa0590260 | 0.809720 | 1.645841e-50 | -8.615850e-47 |
Msa0135470 | Msa0590260 | 0.801510 | 8.704904e-49 | -8.615850e-47 |
Msa0138340 | Msa0590260 | 0.830151 | 3.451469e-55 | -8.615850e-47 |
Msa0147960 | Msa0590260 | 0.828529 | 8.547906e-55 | -8.615850e-47 |
Msa0155350 | Msa0590260 | 0.800152 | 1.648152e-48 | -8.615850e-47 |
Msa0167150 | Msa0590260 | 0.821800 | 3.330715e-53 | -8.615850e-47 |
Msa0168950 | Msa0590260 | 0.810211 | 1.289978e-50 | -8.615850e-47 |
Msa0178440 | Msa0590260 | 0.804500 | 2.097286e-49 | -8.615850e-47 |
Msa0180100 | Msa0590260 | 0.806113 | 9.630977e-50 | -8.615850e-47 |
Msa0184510 | Msa0590260 | 0.801246 | 9.855402e-49 | -8.615850e-47 |
Msa0194750 | Msa0590260 | 0.830973 | 2.171335e-55 | -8.615850e-47 |
Msa0195670 | Msa0590260 | 0.809621 | 1.728691e-50 | -8.615850e-47 |
Msa0208040 | Msa0590260 | 0.817625 | 2.992810e-52 | -8.615850e-47 |
Msa0208710 | Msa0590260 | 0.802391 | 5.736022e-49 | -8.615850e-47 |
Msa0209370 | Msa0590260 | 0.808518 | 2.978375e-50 | -8.615850e-47 |
Msa0220050 | Msa0590260 | 0.802115 | 6.537044e-49 | -8.615850e-47 |
Msa0225070 | Msa0590260 | 0.818563 | 1.836680e-52 | -8.615850e-47 |
Msa0229350 | Msa0590260 | 0.824590 | 7.432550e-54 | -8.615850e-47 |
Msa0236690 | Msa0590260 | 0.831378 | 1.727369e-55 | -8.615850e-47 |
Msa0237650 | Msa0590260 | 0.821446 | 4.021416e-53 | -8.615850e-47 |
Msa0367590 | Msa0590260 | 0.828071 | 1.101918e-54 | -8.615850e-47 |
Msa0370690 | Msa0590260 | 0.842585 | 2.363161e-58 | -8.615850e-47 |
Msa0375570 | Msa0590260 | 0.801150 | 1.031412e-48 | -8.615850e-47 |
Msa0376480 | Msa0590260 | 0.804702 | 1.902619e-49 | -8.615850e-47 |
Msa0378530 | Msa0590260 | 0.804987 | 1.659138e-49 | -8.615850e-47 |
Msa0382020 | Msa0590260 | 0.805601 | 1.234088e-49 | -8.615850e-47 |
Msa0387970 | Msa0590260 | 0.802221 | 6.218653e-49 | -8.615850e-47 |
Msa0395780 | Msa0590260 | 0.804783 | 1.830075e-49 | -8.615850e-47 |
Msa0403740 | Msa0590260 | 0.802715 | 4.919605e-49 | -8.615850e-47 |
Msa0421230 | Msa0590260 | 0.801966 | 7.017720e-49 | -8.615850e-47 |
Msa0422230 | Msa0590260 | 0.833630 | 4.777186e-56 | -8.615850e-47 |
Msa0427260 | Msa0590260 | 0.802373 | 5.786036e-49 | -8.615850e-47 |
Msa0428720 | Msa0590260 | 0.809206 | 2.122286e-50 | -8.615850e-47 |
Msa0429000 | Msa0590260 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
Msa0438440 | Msa0590260 | 0.826524 | 2.588190e-54 | -8.615850e-47 |
Msa0447830 | Msa0590260 | 0.800621 | 1.322338e-48 | -8.615850e-47 |
Msa0450230 | Msa0590260 | 0.813523 | 2.451380e-51 | -8.615850e-47 |
Msa0456450 | Msa0590260 | 0.808183 | 3.510882e-50 | -8.615850e-47 |
Msa0457070 | Msa0590260 | 0.809122 | 2.212197e-50 | -8.615850e-47 |
Msa0471130 | Msa0590260 | 0.809359 | 1.967339e-50 | -8.615850e-47 |
Msa0239610 | Msa0590260 | 0.816320 | 5.875588e-52 | -8.615850e-47 |
Msa0246470 | Msa0590260 | 0.820279 | 7.459969e-53 | -8.615850e-47 |
Msa0265440 | Msa0590260 | 0.820745 | 5.831545e-53 | -8.615850e-47 |
Msa0266140 | Msa0590260 | 0.808209 | 3.466215e-50 | -8.615850e-47 |
Msa0269430 | Msa0590260 | 0.848530 | 5.779495e-60 | -8.615850e-47 |
Msa0269660 | Msa0590260 | 0.823728 | 1.184949e-53 | -8.615850e-47 |
Msa0270730 | Msa0590260 | 0.808736 | 2.674477e-50 | -8.615850e-47 |
Msa0304060 | Msa0590260 | 0.821685 | 3.540707e-53 | -8.615850e-47 |
Msa0304350 | Msa0590260 | 0.810712 | 1.005918e-50 | -8.615850e-47 |
Msa0305910 | Msa0590260 | 0.809888 | 1.514570e-50 | -8.615850e-47 |
Msa0306160 | Msa0590260 | 0.801993 | 6.926306e-49 | -8.615850e-47 |
Msa0309490 | Msa0590260 | 0.805087 | 1.581314e-49 | -8.615850e-47 |
Msa0315010 | Msa0590260 | 0.814295 | 1.656680e-51 | -8.615850e-47 |
Msa0323790 | Msa0590260 | 0.807300 | 5.407635e-50 | -8.615850e-47 |
Msa0330240 | Msa0590260 | 0.802840 | 4.633909e-49 | -8.615850e-47 |
Msa0330770 | Msa0590260 | 0.819146 | 1.353632e-52 | -8.615850e-47 |
Msa0340830 | Msa0590260 | 0.813502 | 2.478436e-51 | -8.615850e-47 |
Msa0340870 | Msa0590260 | 0.816307 | 5.916368e-52 | -8.615850e-47 |
Msa0343230 | Msa0590260 | 0.834727 | 2.536355e-56 | -8.615850e-47 |
Msa0349220 | Msa0590260 | 0.862333 | 5.459435e-64 | -8.615850e-47 |
Msa0358750 | Msa0590260 | 0.810552 | 1.088861e-50 | -8.615850e-47 |
Msa0364030 | Msa0590260 | 0.803088 | 4.119757e-49 | -8.615850e-47 |
Msa0510410 | Msa0590260 | 0.812140 | 4.925716e-51 | -8.615850e-47 |
Msa0511040 | Msa0590260 | 0.810257 | 1.261326e-50 | -8.615850e-47 |
Msa0512430 | Msa0590260 | 0.812645 | 3.819840e-51 | -8.615850e-47 |
Msa0520480 | Msa0590260 | 0.820493 | 6.664009e-53 | -8.615850e-47 |
Msa0527210 | Msa0590260 | 0.826851 | 2.161933e-54 | -8.615850e-47 |
Msa0528830 | Msa0590260 | 0.823918 | 1.069377e-53 | -8.615850e-47 |
Msa0530250 | Msa0590260 | 0.806237 | 9.066916e-50 | -8.615850e-47 |
Msa0538050 | Msa0590260 | 0.833801 | 4.328837e-56 | -8.615850e-47 |
Msa0539400 | Msa0590260 | 0.808528 | 2.963076e-50 | -8.615850e-47 |
Msa0548230 | Msa0590260 | 0.800949 | 1.133576e-48 | -8.615850e-47 |
Msa0549940 | Msa0590260 | 0.800918 | 1.150494e-48 | -8.615850e-47 |
Msa0559280 | Msa0590260 | 0.812650 | 3.811280e-51 | -8.615850e-47 |
Msa0562680 | Msa0590260 | 0.820797 | 5.674375e-53 | -8.615850e-47 |
Msa0565530 | Msa0590260 | 0.813476 | 2.510354e-51 | -8.615850e-47 |
Msa0568120 | Msa0590260 | 0.816425 | 5.567026e-52 | -8.615850e-47 |
Msa0568300 | Msa0590260 | 0.836764 | 7.728425e-57 | -8.615850e-47 |
Msa0569230 | Msa0590260 | 0.809121 | 2.212231e-50 | -8.615850e-47 |
Msa0569540 | Msa0590260 | 0.803899 | 2.797095e-49 | -8.615850e-47 |
Msa0569930 | Msa0590260 | 0.837143 | 6.183400e-57 | -8.615850e-47 |
Msa0569980 | Msa0590260 | 0.810685 | 1.019507e-50 | -8.615850e-47 |
Msa0570250 | Msa0590260 | 0.803030 | 4.235117e-49 | -8.615850e-47 |
Msa0572730 | Msa0590260 | 0.806379 | 8.466306e-50 | -8.615850e-47 |
Msa0572820 | Msa0590260 | 0.812064 | 5.116442e-51 | -8.615850e-47 |
Msa0573970 | Msa0590260 | 0.806646 | 7.436436e-50 | -8.615850e-47 |
Msa0576500 | Msa0590260 | 0.812984 | 3.219945e-51 | -8.615850e-47 |
Msa0576550 | Msa0590260 | 0.822886 | 1.863045e-53 | -8.615850e-47 |
Msa0578400 | Msa0590260 | 0.813946 | 1.978911e-51 | -8.615850e-47 |
Msa0582270 | Msa0590260 | 0.812203 | 4.772060e-51 | -8.615850e-47 |
Msa0585720 | Msa0590260 | 0.835107 | 2.034238e-56 | -8.615850e-47 |
Msa0585810 | Msa0590260 | 0.803016 | 4.263224e-49 | -8.615850e-47 |
Msa0587070 | Msa0590260 | 0.826881 | 2.126917e-54 | -8.615850e-47 |
Msa0589680 | Msa0590260 | 0.847515 | 1.101396e-59 | -8.615850e-47 |
Msa0590260 | Msa0608780 | 0.830040 | 3.673212e-55 | -8.615850e-47 |
Msa0590260 | Msa0610240 | 0.804680 | 1.923465e-49 | -8.615850e-47 |
Msa0590260 | Msa0610300 | 0.816313 | 5.897115e-52 | -8.615850e-47 |
Msa0590260 | Msa0614020 | 0.827943 | 1.183140e-54 | -8.615850e-47 |
Msa0590260 | Msa0625440 | 0.818025 | 2.431033e-52 | -8.615850e-47 |
Msa0590260 | Msa0625900 | 0.827177 | 1.806447e-54 | -8.615850e-47 |
Msa0590260 | Msa0628900 | 0.814836 | 1.257762e-51 | -8.615850e-47 |
Msa0590260 | Msa0631950 | 0.841019 | 6.124867e-58 | -8.615850e-47 |
Msa0590260 | Msa0632040 | 0.833210 | 6.078075e-56 | -8.615850e-47 |
Msa0590260 | Msa0634260 | 0.804634 | 1.965821e-49 | -8.615850e-47 |
Msa0590260 | Msa0638500 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
Msa0590260 | Msa0639220 | 0.809116 | 2.217848e-50 | -8.615850e-47 |
Msa0590260 | Msa0649250 | 0.813307 | 2.735072e-51 | -8.615850e-47 |
Msa0590260 | Msa0654560 | 0.813172 | 2.927892e-51 | -8.615850e-47 |
Msa0590260 | Msa0660070 | 0.809438 | 1.892291e-50 | -8.615850e-47 |
Msa0590260 | Msa0661540 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
Msa0590260 | Msa0662670 | 0.840220 | 9.912476e-58 | -8.615850e-47 |
Msa0590260 | Msa0663580 | 0.834001 | 3.857181e-56 | -8.615850e-47 |
Msa0590260 | Msa0663690 | 0.821020 | 5.041169e-53 | -8.615850e-47 |
Msa0590260 | Msa0685860 | 0.800882 | 1.169838e-48 | -8.615850e-47 |
Msa0590260 | Msa0688880 | 0.846878 | 1.647092e-59 | -8.615850e-47 |
Msa0590260 | Msa0692480 | 0.807479 | 4.953386e-50 | -8.615850e-47 |
Msa0590260 | Msa0696600 | 0.802668 | 5.029070e-49 | -8.615850e-47 |
Msa0590260 | Msa0697180 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
Msa0590260 | Msa0702020 | 0.819456 | 1.150722e-52 | -8.615850e-47 |
Msa0590260 | Msa0703430 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
Msa0590260 | Msa0704790 | 0.801993 | 6.925848e-49 | -8.615850e-47 |
Msa0590260 | Msa0705710 | 0.856312 | 3.502237e-62 | -8.615850e-47 |
Msa0590260 | Msa0706130 | 0.857273 | 1.825859e-62 | -8.615850e-47 |
Msa0590260 | Msa0707270 | 0.814693 | 1.353178e-51 | -8.615850e-47 |
Msa0590260 | Msa0707880 | 0.814598 | 1.419756e-51 | -8.615850e-47 |
Msa0590260 | Msa0708870 | 0.844652 | 6.619913e-59 | -8.615850e-47 |
Msa0590260 | Msa0717540 | 0.842953 | 1.886758e-58 | -8.615850e-47 |
Msa0590260 | Msa0733240 | 0.817371 | 3.413820e-52 | -8.615850e-47 |
Msa0590260 | Msa0738280 | 0.814450 | 1.531207e-51 | -8.615850e-47 |
Msa0590260 | Msa0738460 | 0.810067 | 1.386022e-50 | -8.615850e-47 |
Msa0590260 | Msa0750490 | 0.825662 | 4.149067e-54 | -8.615850e-47 |
Msa0590260 | Msa0754020 | 0.804380 | 2.221570e-49 | -8.615850e-47 |
Msa0590260 | Msa0758880 | 0.810452 | 1.144811e-50 | -8.615850e-47 |
Msa0590260 | Msa0761830 | -0.800373 | 1.485885e-48 | -8.615850e-47 |
Msa0590260 | Msa0766950 | 0.800705 | 1.271343e-48 | -8.615850e-47 |
Msa0590260 | Msa0767040 | 0.811511 | 6.749859e-51 | -8.615850e-47 |
Msa0590260 | Msa0772160 | 0.810822 | 9.521292e-51 | -8.615850e-47 |
Msa0590260 | Msa0774360 | 0.833708 | 4.567368e-56 | -8.615850e-47 |
Msa0590260 | Msa0787380 | 0.809866 | 1.530967e-50 | -8.615850e-47 |
Msa0590260 | Msa0797180 | 0.804173 | 2.452508e-49 | -8.615850e-47 |
Msa0590260 | Msa0797980 | 0.802182 | 6.333630e-49 | -8.615850e-47 |
Msa0590260 | Msa0802920 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
Msa0590260 | Msa0802950 | 0.827351 | 1.641306e-54 | -8.615850e-47 |
Msa0590260 | Msa0807850 | 0.822998 | 1.754750e-53 | -8.615850e-47 |
Msa0590260 | Msa0812020 | 0.832044 | 1.183302e-55 | -8.615850e-47 |
Msa0590260 | Msa0817810 | 0.815381 | 9.519478e-52 | -8.615850e-47 |
Msa0590260 | Msa0826940 | 0.836522 | 8.905525e-57 | -8.615850e-47 |
Msa0590260 | Msa0846070 | 0.867593 | 1.220444e-65 | -8.615850e-47 |
Msa0590260 | Msa0849080 | 0.822074 | 2.876970e-53 | -8.615850e-47 |
Msa0590260 | Msa0852090 | 0.835818 | 1.344312e-56 | -8.615850e-47 |
Msa0590260 | Msa0861400 | 0.809862 | 1.534383e-50 | -8.615850e-47 |
Msa0590260 | Msa0876270 | 0.807307 | 5.388794e-50 | -8.615850e-47 |
Msa0590260 | Msa0898830 | 0.833252 | 5.934906e-56 | -8.615850e-47 |
Msa0590260 | Msa0917630 | 0.832646 | 8.395124e-56 | -8.615850e-47 |
Msa0590260 | Msa0925630 | 0.816736 | 4.740938e-52 | -8.615850e-47 |
Msa0590260 | Msa0942610 | 0.817428 | 3.314968e-52 | -8.615850e-47 |
Msa0590260 | Msa0947550 | 0.801167 | 1.023079e-48 | -8.615850e-47 |
Msa0590260 | Msa0967900 | 0.826288 | 2.945734e-54 | -8.615850e-47 |
Msa0590260 | Msa0975440 | 0.814050 | 1.876633e-51 | -8.615850e-47 |
Msa0590260 | Msa0998660 | 0.824289 | 8.747917e-54 | -8.615850e-47 |
Msa0590260 | Msa1016580 | 0.803119 | 4.057653e-49 | -8.615850e-47 |
Msa0590260 | Msa1025440 | 0.829689 | 4.473023e-55 | -8.615850e-47 |
Msa0590260 | Msa1031530 | 0.805641 | 1.210055e-49 | -8.615850e-47 |
Msa0590260 | Msa1035640 | 0.823175 | 1.595768e-53 | -8.615850e-47 |
Msa0590260 | Msa1036260 | 0.824116 | 9.605506e-54 | -8.615850e-47 |
Msa0590260 | Msa1038230 | 0.831773 | 1.380082e-55 | -8.615850e-47 |
Msa0590260 | Msa1039860 | 0.818148 | 2.279723e-52 | -8.615850e-47 |
Msa0590260 | Msa1070630 | 0.809220 | 2.107525e-50 | -8.615850e-47 |
Msa0590260 | Msa1078600 | 0.827840 | 1.252785e-54 | -8.615850e-47 |
Msa0590260 | Msa1078770 | 0.830445 | 2.924769e-55 | -8.615850e-47 |
Msa0590260 | Msa1084210 | 0.837237 | 5.853140e-57 | -8.615850e-47 |
Msa0590260 | Msa1092430 | 0.805440 | 1.333524e-49 | -8.615850e-47 |
Msa0590260 | Msa1096520 | 0.806760 | 7.035632e-50 | -8.615850e-47 |
Msa0590260 | Msa1109500 | 0.813719 | 2.220427e-51 | -8.615850e-47 |
Msa0590260 | Msa1126980 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
Msa0590260 | Msa1128230 | 0.844647 | 6.640627e-59 | -8.615850e-47 |
Msa0590260 | Msa1130850 | 0.813709 | 2.231619e-51 | -8.615850e-47 |
Msa0590260 | Msa1130910 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
Msa0590260 | Msa1134420 | 0.833777 | 4.388880e-56 | -8.615850e-47 |
Msa0590260 | Msa1143060 | 0.837347 | 5.483033e-57 | -8.615850e-47 |
Msa0590260 | Msa1143860 | 0.815408 | 9.388360e-52 | -8.615850e-47 |
Msa0590260 | Msa1156430 | 0.801474 | 8.850541e-49 | -8.615850e-47 |
Msa0590260 | Msa1158450 | 0.812052 | 5.146346e-51 | -8.615850e-47 |
Msa0590260 | Msa1169600 | 0.838334 | 3.059620e-57 | -8.615850e-47 |
Msa0590260 | Msa1205270 | 0.813662 | 2.284958e-51 | -8.615850e-47 |
Msa0590260 | Msa1205520 | 0.809544 | 1.795622e-50 | -8.615850e-47 |
Msa0590260 | Msa1209990 | 0.822964 | 1.786813e-53 | -8.615850e-47 |
Msa0590260 | Msa1215790 | 0.815926 | 7.196848e-52 | -8.615850e-47 |
Msa0590260 | Msa1221540 | 0.801551 | 8.534786e-49 | -8.615850e-47 |
Msa0590260 | Msa1225140 | 0.817766 | 2.781220e-52 | -8.615850e-47 |
Msa0590260 | Msa1225240 | 0.811362 | 7.270910e-51 | -8.615850e-47 |
Msa0590260 | Msa1228600 | 0.826000 | 3.449070e-54 | -8.615850e-47 |
Msa0590260 | Msa1239000 | 0.807796 | 4.241959e-50 | -8.615850e-47 |
Msa0590260 | Msa1260520 | 0.839599 | 1.438713e-57 | -8.615850e-47 |
Msa0590260 | Msa1269370 | 0.823623 | 1.253645e-53 | -8.615850e-47 |
Msa0590260 | Msa1291070 | 0.826611 | 2.467581e-54 | -8.615850e-47 |
Msa0590260 | Msa1298480 | 0.821402 | 4.115229e-53 | -8.615850e-47 |
Msa0590260 | Msa1301610 | 0.828145 | 1.058110e-54 | -8.615850e-47 |
Msa0590260 | Msa1323260 | 0.824651 | 7.191947e-54 | -8.615850e-47 |
Msa0590260 | Msa1326800 | 0.806591 | 7.637580e-50 | -8.615850e-47 |
Msa0590260 | Msa1327690 | 0.830972 | 2.172881e-55 | -8.615850e-47 |
Msa0590260 | Msa1331530 | 0.801137 | 1.037747e-48 | -8.615850e-47 |
Msa0590260 | Msa1338600 | 0.829412 | 5.223407e-55 | -8.615850e-47 |
Msa0590260 | Msa1341390 | 0.815449 | 9.191399e-52 | -8.615850e-47 |
Msa0590260 | Msa1342110 | 0.808032 | 3.779254e-50 | -8.615850e-47 |
Msa0590260 | Msa1342360 | 0.808897 | 2.471136e-50 | -8.615850e-47 |
Msa0590260 | Msa1343450 | 0.817594 | 3.041030e-52 | -8.615850e-47 |
Msa0590260 | Msa1345120 | 0.806920 | 6.506858e-50 | -8.615850e-47 |
Msa0590260 | Msa1348860 | 0.807350 | 5.275577e-50 | -8.615850e-47 |
Msa0590260 | Msa1349490 | 0.810185 | 1.307192e-50 | -8.615850e-47 |
Msa0590260 | Msa1350580 | 0.814241 | 1.702937e-51 | -8.615850e-47 |
Msa0590260 | Msa1369220 | 0.831891 | 1.290439e-55 | -8.615850e-47 |
Msa0590260 | Msa1371060 | 0.826010 | 3.430108e-54 | -8.615850e-47 |
Msa0590260 | Msa1371540 | 0.819200 | 1.315908e-52 | -8.615850e-47 |
Msa0590260 | Msa1372570 | 0.824749 | 6.819427e-54 | -8.615850e-47 |
Msa0590260 | Msa1373570 | 0.814612 | 1.409669e-51 | -8.615850e-47 |
Msa0590260 | Msa1375980 | 0.811581 | 6.516032e-51 | -8.615850e-47 |
Msa0590260 | Msa1376010 | 0.816860 | 4.446642e-52 | -8.615850e-47 |
Msa0590260 | Msa1377980 | 0.813134 | 2.984324e-51 | -8.615850e-47 |
Msa0590260 | Msa1379270 | 0.809925 | 1.487168e-50 | -8.615850e-47 |
Msa0590260 | Msa1382100 | 0.821656 | 3.595732e-53 | -8.615850e-47 |
Msa0590260 | Msa1384410 | 0.804700 | 1.904924e-49 | -8.615850e-47 |
Msa0590260 | Msa1393550 | 0.801924 | 7.157924e-49 | -8.615850e-47 |
Msa0590260 | Msa1398460 | -0.801610 | 8.300552e-49 | -8.615850e-47 |
Msa0590260 | Msa1401640 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
Msa0590260 | Msa1408280 | 0.812064 | 5.116540e-51 | -8.615850e-47 |
Msa0590260 | Msa1408860 | 0.802206 | 6.263015e-49 | -8.615850e-47 |
Msa0590260 | Msa1412810 | 0.811712 | 6.102384e-51 | -8.615850e-47 |
Msa0590260 | Msa1418780 | 0.804328 | 2.276960e-49 | -8.615850e-47 |
Msa0590260 | Msa1418840 | 0.815944 | 7.131634e-52 | -8.615850e-47 |
Msa0590260 | Msa1422150 | 0.820677 | 6.045244e-53 | -8.615850e-47 |
Msa0590260 | Msa1425510 | 0.800200 | 1.611491e-48 | -8.615850e-47 |
Msa0590260 | Msa1426310 | 0.804178 | 2.446884e-49 | -8.615850e-47 |
Msa0590260 | Msa1429180 | 0.824919 | 6.217179e-54 | -8.615850e-47 |
Msa0590260 | Msa1435950 | 0.815415 | 9.352915e-52 | -8.615850e-47 |
Msa0590260 | Msa1436660 | 0.817769 | 2.777328e-52 | -8.615850e-47 |
Msa0590260 | Msa1449270 | 0.806131 | 9.544935e-50 | -8.615850e-47 |
Msa0590260 | Msa1452800 | 0.803201 | 3.902700e-49 | -8.615850e-47 |
Msa0590260 | Msa1453180 | 0.833493 | 5.166441e-56 | -8.615850e-47 |
Msa0590260 | Msa1456170 | 0.823009 | 1.744821e-53 | -8.615850e-47 |
Msa0590260 | Msa1456620 | 0.824682 | 7.070139e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0590260 | MtrunA17_Chr4g0007661 | 91.919 | 198 | 12 | 1 | 1 | 198 | 1 | 194 | 3.94e-116 | 328 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0590260 | AT4G13200.1 | 73.750 | 80 | 19 | 1 | 69 | 148 | 65 | 142 | 8.07e-35 | 122 |
Find 65 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTCCCCGTTTCTTGAAAT+TGG | 0.187757 | 4_2:-13615082 | Msa0590260:three_prime_UTR |
GAGGATGTTGGAAAAGGTTT+TGG | 0.267900 | 4_2:+13618244 | None:intergenic |
AAAACAAGTACAGGAATTTC+AGG | 0.306473 | 4_2:-13616279 | Msa0590260:intron |
GTGTGTGTCTGTCTCTGTTT+TGG | 0.310909 | 4_2:-13618337 | Msa0590260:five_prime_UTR |
TTTATGTTTACTTCTTCCTT+TGG | 0.342946 | 4_2:-13615142 | Msa0590260:three_prime_UTR |
AGTGGGCTCAATGTATATTT+CGG | 0.360139 | 4_2:+13615238 | None:intergenic |
ACATTCCAATTTCAAGAAAC+GGG | 0.367974 | 4_2:+13615077 | None:intergenic |
CACATTCCAATTTCAAGAAA+CGG | 0.378190 | 4_2:+13615076 | None:intergenic |
GTAGACTGTACGGAAGTAAC+TGG | 0.423294 | 4_2:+13615269 | None:intergenic |
GTGATTATACCTCAATGAAT+AGG | 0.427301 | 4_2:-13615056 | Msa0590260:three_prime_UTR |
GAAGCGAAGGTTGTTGGAGA+TGG | 0.430525 | 4_2:+13618278 | None:intergenic |
AGATGGTGAAGGGGAGAGAC+TGG | 0.433088 | 4_2:+13618295 | None:intergenic |
CTAGGAGAAGCGAAGGTTGT+TGG | 0.443557 | 4_2:+13618272 | None:intergenic |
AACTTTCCAGCTGCAACAAA+AGG | 0.444492 | 4_2:-13618190 | Msa0590260:CDS |
ATCTTTGATGTGATTTGTGT+TGG | 0.451114 | 4_2:-13614996 | Msa0590260:three_prime_UTR |
GCTGGAAAGTTGAATGCATA+TGG | 0.471661 | 4_2:+13618202 | None:intergenic |
GTGGTGGATACATCTACTTC+AGG | 0.473097 | 4_2:-13615314 | Msa0590260:CDS |
AGAAGAAGGAACGAGGATGT+TGG | 0.477615 | 4_2:+13618232 | None:intergenic |
CAACAACCTTCGCTTCTCCT+AGG | 0.487374 | 4_2:-13618271 | Msa0590260:CDS |
AAGTTGAATGCATATGGGTT+TGG | 0.500968 | 4_2:+13618208 | None:intergenic |
TATCACTTATGAACTTAATG+TGG | 0.501100 | 4_2:+13615202 | None:intergenic |
TGTTAAAACGTATCACAACT+TGG | 0.505464 | 4_2:-13615102 | Msa0590260:three_prime_UTR |
AGGAACGAGGATGTTGGAAA+AGG | 0.507028 | 4_2:+13618238 | None:intergenic |
TCTTATACAGGAAGAAGTGT+TGG | 0.510600 | 4_2:-13615432 | Msa0590260:intron |
AGAGGCACAACCGCGGGGAC+TGG | 0.510821 | 4_2:-13615366 | Msa0590260:CDS |
AGCTACAGAGGCACAACCGC+GGG | 0.512026 | 4_2:-13615372 | Msa0590260:CDS |
ACAATACCTTCTTCCCTGGT+GGG | 0.513213 | 4_2:-13618139 | Msa0590260:CDS |
AACAATACCTTCTTCCCTGG+TGG | 0.526584 | 4_2:-13618140 | Msa0590260:CDS |
TCTTTGATGTGATTTGTGTT+GGG | 0.530541 | 4_2:-13614995 | Msa0590260:three_prime_UTR |
ATCACTTATGAACTTAATGT+GGG | 0.538123 | 4_2:+13615203 | None:intergenic |
CTGGAAAGTTGAATGCATAT+GGG | 0.538772 | 4_2:+13618203 | None:intergenic |
AAGGTTGTTGGAGATGGTGA+AGG | 0.541919 | 4_2:+13618284 | None:intergenic |
GGTGAGCTCTTGAGTACAGT+TGG | 0.546113 | 4_2:-13616323 | Msa0590260:CDS |
ATAAAATAGTTTACCAGAGG+GGG | 0.550373 | 4_2:+13618115 | None:intergenic |
GAGCGCATTGAGTCGACACT+TGG | 0.551517 | 4_2:-13616344 | Msa0590260:CDS |
GTGGGATCCTCCCCTTCAGT+GGG | 0.555642 | 4_2:+13615221 | None:intergenic |
AGGTTGTTGGAGATGGTGAA+GGG | 0.556621 | 4_2:+13618285 | None:intergenic |
GTGGAAAGTGTTGGAAAGTG+TGG | 0.559971 | 4_2:-13618398 | Msa0590260:five_prime_UTR |
TGTGGGATCCTCCCCTTCAG+TGG | 0.562869 | 4_2:+13615220 | None:intergenic |
ACATCTTGTGTGGAAAGTGT+TGG | 0.571426 | 4_2:-13618407 | None:intergenic |
AATAAAATAGTTTACCAGAG+GGG | 0.576394 | 4_2:+13618114 | None:intergenic |
TGTAACAATACCTTCTTCCC+TGG | 0.577863 | 4_2:-13618143 | Msa0590260:CDS |
ATATACATTGAGCCCACTGA+AGG | 0.585974 | 4_2:-13615233 | Msa0590260:CDS |
TTCTGTAGAAGCTGTAGACT+CGG | 0.589146 | 4_2:+13615340 | None:intergenic |
CATTGAGCCCACTGAAGGGG+AGG | 0.593326 | 4_2:-13615228 | Msa0590260:CDS |
CATATGGGTTTGGAAGAAGA+AGG | 0.597786 | 4_2:+13618218 | None:intergenic |
GGTTGTTGGAGATGGTGAAG+GGG | 0.598990 | 4_2:+13618286 | None:intergenic |
GGATGCATCAGTAGACTGTA+CGG | 0.608134 | 4_2:+13615259 | None:intergenic |
AAGTGAACACCTATTCATTG+AGG | 0.615195 | 4_2:+13615047 | None:intergenic |
TATACATTGAGCCCACTGAA+GGG | 0.616249 | 4_2:-13615232 | Msa0590260:CDS |
GGAGAACCTAGGAGAAGCGA+AGG | 0.618276 | 4_2:+13618265 | None:intergenic |
TGGAAAGTGTTGGAAAGTGT+GGG | 0.618354 | 4_2:-13618397 | Msa0590260:five_prime_UTR |
TACAGCTTCTACAGAAGTCG+TGG | 0.624697 | 4_2:-13615333 | Msa0590260:CDS |
ATACATTGAGCCCACTGAAG+GGG | 0.634389 | 4_2:-13615231 | Msa0590260:CDS |
CTGTACGGAAGTAACTGGAT+CGG | 0.637727 | 4_2:+13615274 | None:intergenic |
AGCTTCTACAGAAGTCGTGG+TGG | 0.651039 | 4_2:-13615330 | Msa0590260:CDS |
AGCAGCGCGTGAAGCTACAG+AGG | 0.653253 | 4_2:-13615384 | Msa0590260:CDS |
AACTTACATATACATGCCAA+AGG | 0.655340 | 4_2:+13615126 | None:intergenic |
CATTCCAATTTCAAGAAACG+GGG | 0.657652 | 4_2:+13615078 | None:intergenic |
ATTGTTACAGCGAAGTCCAG+TGG | 0.665812 | 4_2:+13618157 | None:intergenic |
GTTTGGAAGAAGAAGGAACG+AGG | 0.668466 | 4_2:+13618225 | None:intergenic |
TAAAATAGTTTACCAGAGGG+GGG | 0.670309 | 4_2:+13618116 | None:intergenic |
AAGCTACAGAGGCACAACCG+CGG | 0.698235 | 4_2:-13615373 | Msa0590260:CDS |
GACTCGGAAACCAGTCCCCG+CGG | 0.698498 | 4_2:+13615356 | None:intergenic |
GCTACAGAGGCACAACCGCG+GGG | 0.709325 | 4_2:-13615371 | Msa0590260:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTCTATAATTTGTTT+TGG | - | chr4_2:13615438-13615457 | Msa0590260:intron | 10.0% |
!!! | TTTTTTCTATAATTTGTTTT+GGG | - | chr4_2:13615439-13615458 | Msa0590260:intron | 10.0% |
!!! | TTTTTCTATAATTTGTTTTG+GGG | - | chr4_2:13615440-13615459 | Msa0590260:intron | 15.0% |
!! | TTGTTAAACAAAAAATTAAG+AGG | - | chr4_2:13616504-13616523 | Msa0590260:intron | 15.0% |
!!! | TCTTTGTTTTAAAAAAAAGA+GGG | + | chr4_2:13616640-13616659 | None:intergenic | 15.0% |
!! | TTTCTCTTAAAATTTAATAG+CGG | - | chr4_2:13616672-13616691 | Msa0590260:intron | 15.0% |
!!! | GGATATATAGTTTTTTTAAA+GGG | + | chr4_2:13616894-13616913 | None:intergenic | 15.0% |
!!! | AGGATATATAGTTTTTTTAA+AGG | + | chr4_2:13616895-13616914 | None:intergenic | 15.0% |
!!! | AAAAAAAAAGTTCCAAATTT+TGG | - | chr4_2:13617577-13617596 | Msa0590260:intron | 15.0% |
!! | ACAAAAAAAAATATATCGAA+AGG | + | chr4_2:13618227-13618246 | None:intergenic | 15.0% |
!! | AAATAAAATAGTTTACCAGA+GGG | + | chr4_2:13615281-13615300 | None:intergenic | 20.0% |
!!! | GAATGGTATGTTTTAATTTT+AGG | - | chr4_2:13615502-13615521 | Msa0590260:intron | 20.0% |
!!! | TTTTGCTTTACTTTAAAGTT+TGG | - | chr4_2:13615592-13615611 | Msa0590260:intron | 20.0% |
!! | TTTAATGTAATCATATGTGA+CGG | - | chr4_2:13615720-13615739 | Msa0590260:intron | 20.0% |
!!! | CAGTTTTAATCTTAATCAAA+GGG | + | chr4_2:13615943-13615962 | None:intergenic | 20.0% |
!! | ATCAAAGCAATAAATTTAGT+CGG | + | chr4_2:13615966-13615985 | None:intergenic | 20.0% |
!!! | TAAATTTTGGAAAAACCAAA+TGG | + | chr4_2:13616112-13616131 | None:intergenic | 20.0% |
!! | TACAAAAAGTTATGAAATAG+CGG | + | chr4_2:13616282-13616301 | None:intergenic | 20.0% |
!! | AAAATTAAGAGGATAACAAA+AGG | - | chr4_2:13616515-13616534 | Msa0590260:intron | 20.0% |
!!! | GTCTTTGTTTTAAAAAAAAG+AGG | + | chr4_2:13616641-13616660 | None:intergenic | 20.0% |
!!! | TATCCTTAGATTTTTGTATT+AGG | - | chr4_2:13616909-13616928 | Msa0590260:intron | 20.0% |
!! | AGTAAACAACAATATTGTTT+AGG | + | chr4_2:13617240-13617259 | None:intergenic | 20.0% |
!!! | AAAATGTTGTTACTTGTATT+GGG | - | chr4_2:13617534-13617553 | Msa0590260:intron | 20.0% |
!! | TAAATTATGTACCATTAGAT+TGG | + | chr4_2:13617874-13617893 | None:intergenic | 20.0% |
!! | CGAAATTATAATTCTTATAC+AGG | - | chr4_2:13617947-13617966 | Msa0590260:intron | 20.0% |
! | AATAAAATAGTTTACCAGAG+GGG | + | chr4_2:13615280-13615299 | None:intergenic | 25.0% |
! | GAAATAAAATAGTTTACCAG+AGG | + | chr4_2:13615282-13615301 | None:intergenic | 25.0% |
!! | ATTATTTCACATTTGCTGAA+TGG | - | chr4_2:13615485-13615504 | Msa0590260:intron | 25.0% |
! | TAGGATGAATAATTGAATTC+CGG | - | chr4_2:13615521-13615540 | Msa0590260:intron | 25.0% |
!!! | CTTTAAAGTTTGGTTTTTTC+CGG | - | chr4_2:13615602-13615621 | Msa0590260:intron | 25.0% |
!!! | TACTTTTCATTTAGCTCAAA+AGG | - | chr4_2:13615850-13615869 | Msa0590260:intron | 25.0% |
! | CTCAAAAGGTTATATAAAGA+TGG | - | chr4_2:13615864-13615883 | Msa0590260:intron | 25.0% |
!!! | GCAGTTTTAATCTTAATCAA+AGG | + | chr4_2:13615944-13615963 | None:intergenic | 25.0% |
!! | ATTTATTGCTTTGATAACCA+AGG | - | chr4_2:13615971-13615990 | Msa0590260:intron | 25.0% |
!! | TATCAGTCATCACTAAATTT+TGG | + | chr4_2:13616125-13616144 | None:intergenic | 25.0% |
! | CATGTATGTAATTACAAGTT+TGG | + | chr4_2:13616172-13616191 | None:intergenic | 25.0% |
! | GTAAACATAGTAGTTAATAG+CGG | - | chr4_2:13616195-13616214 | Msa0590260:intron | 25.0% |
!!! | CCATATTTTTGTTGTTTTTG+TGG | + | chr4_2:13616338-13616357 | None:intergenic | 25.0% |
! | CCACAAAAACAACAAAAATA+TGG | - | chr4_2:13616335-13616354 | Msa0590260:CDS | 25.0% |
!! | GTTTTATATGAACAAAACAG+AGG | - | chr4_2:13616379-13616398 | Msa0590260:CDS | 25.0% |
! | AACTTGAACAAAAAAGTAAC+AGG | - | chr4_2:13616465-13616484 | Msa0590260:intron | 25.0% |
! | GTACCTAATACAAAAATCTA+AGG | + | chr4_2:13616915-13616934 | None:intergenic | 25.0% |
! | ATTCAATCTGTTATCTCATA+TGG | - | chr4_2:13617197-13617216 | Msa0590260:intron | 25.0% |
! | TTCAATCTGTTATCTCATAT+GGG | - | chr4_2:13617198-13617217 | Msa0590260:intron | 25.0% |
!! | TGTTTACTGACTATATTCAT+TGG | - | chr4_2:13617252-13617271 | Msa0590260:intron | 25.0% |
! | ATACTAATAATAGCTGGTAT+AGG | - | chr4_2:13617482-13617501 | Msa0590260:intron | 25.0% |
!! | GAAAATGTTGTTACTTGTAT+TGG | - | chr4_2:13617533-13617552 | Msa0590260:intron | 25.0% |
!! | AAATGTTGTTACTTGTATTG+GGG | - | chr4_2:13617535-13617554 | Msa0590260:intron | 25.0% |
! | TCTTCATAACTACCAAAATT+TGG | + | chr4_2:13617592-13617611 | None:intergenic | 25.0% |
! | ATCAGTTATGTATTCCAAAA+TGG | - | chr4_2:13617632-13617651 | Msa0590260:intron | 25.0% |
!! | ATTGACTCAGAAATTCAAAT+TGG | + | chr4_2:13617672-13617691 | None:intergenic | 25.0% |
! | TTTGCTGCAAAACATATTAT+TGG | - | chr4_2:13617693-13617712 | Msa0590260:intron | 25.0% |
! | TTGCTGCAAAACATATTATT+GGG | - | chr4_2:13617694-13617713 | Msa0590260:intron | 25.0% |
!! | TAATTTAAAATGACCGCTTA+TGG | - | chr4_2:13617887-13617906 | Msa0590260:intron | 25.0% |
!! | AATTTAAAATGACCGCTTAT+GGG | - | chr4_2:13617888-13617907 | Msa0590260:intron | 25.0% |
! | ATCACTTATGAACTTAATGT+GGG | + | chr4_2:13618191-13618210 | None:intergenic | 25.0% |
! | TATCACTTATGAACTTAATG+TGG | + | chr4_2:13618192-13618211 | None:intergenic | 25.0% |
! | TTTATGTTTACTTCTTCCTT+TGG | - | chr4_2:13618249-13618268 | Msa0590260:CDS | 25.0% |
ATAAAATAGTTTACCAGAGG+GGG | + | chr4_2:13615279-13615298 | None:intergenic | 30.0% | |
CATCAAAATCAACAAGAGAA+AGG | + | chr4_2:13615304-13615323 | None:intergenic | 30.0% | |
ATAAATTCCCAATAAGTTGC+CGG | + | chr4_2:13615543-13615562 | None:intergenic | 30.0% | |
CTCTCAATCATTATGAATCT+AGG | + | chr4_2:13615804-13615823 | None:intergenic | 30.0% | |
AGATTCATAATGATTGAGAG+AGG | - | chr4_2:13615804-13615823 | Msa0590260:intron | 30.0% | |
ATGTTACAATAATGCTACCT+TGG | + | chr4_2:13615991-13616010 | None:intergenic | 30.0% | |
!!! | AGTCTGGTTTTTAAACCATT+TGG | - | chr4_2:13616094-13616113 | Msa0590260:intron | 30.0% |
TGACTGATAATCCATTCTTA+AGG | - | chr4_2:13616136-13616155 | Msa0590260:intron | 30.0% | |
GCAAAACAAATCCTTAAGAA+TGG | + | chr4_2:13616150-13616169 | None:intergenic | 30.0% | |
TCGTAAATATGTGGTTTACA+CGG | - | chr4_2:13616857-13616876 | Msa0590260:intron | 30.0% | |
TTGAAGTATGTGAATCATGT+AGG | - | chr4_2:13616951-13616970 | Msa0590260:intron | 30.0% | |
TGAACAACAAAAACAAGTAC+AGG | - | chr4_2:13617103-13617122 | Msa0590260:intron | 30.0% | |
AAAACAAGTACAGGAATTTC+AGG | - | chr4_2:13617112-13617131 | Msa0590260:intron | 30.0% | |
! | TTCAGGTAAGGATTTTCAAT+TGG | - | chr4_2:13617129-13617148 | Msa0590260:intron | 30.0% |
TACAAACTATCTTCAAGTAG+AGG | - | chr4_2:13617318-13617337 | Msa0590260:intron | 30.0% | |
TTGAAACTGTAGTCTATAGT+TGG | - | chr4_2:13617426-13617445 | Msa0590260:intron | 30.0% | |
TGAAACTGTAGTCTATAGTT+GGG | - | chr4_2:13617427-13617446 | Msa0590260:intron | 30.0% | |
! | AATGTTGTTACTTGTATTGG+GGG | - | chr4_2:13617536-13617555 | Msa0590260:intron | 30.0% |
GTATTCCAAAATGGTACATT+TGG | - | chr4_2:13617641-13617660 | Msa0590260:intron | 30.0% | |
CTCAGAAATTCAAATTGGAT+TGG | + | chr4_2:13617667-13617686 | None:intergenic | 30.0% | |
! | TGGGCCATAAAAGTATATAT+CGG | - | chr4_2:13617713-13617732 | Msa0590260:intron | 30.0% |
!! | TGCACCGATATATACTTTTA+TGG | + | chr4_2:13617720-13617739 | None:intergenic | 30.0% |
CATGATTCATGCATATCAAA+TGG | - | chr4_2:13617743-13617762 | Msa0590260:intron | 30.0% | |
!!! | TGCTTTTTCCTTTGCTTTTT+TGG | + | chr4_2:13617991-13618010 | None:intergenic | 30.0% |
AACTTACATATACATGCCAA+AGG | + | chr4_2:13618268-13618287 | None:intergenic | 30.0% | |
TGTTAAAACGTATCACAACT+TGG | - | chr4_2:13618289-13618308 | Msa0590260:CDS | 30.0% | |
ACATTCCAATTTCAAGAAAC+GGG | + | chr4_2:13618317-13618336 | None:intergenic | 30.0% | |
CACATTCCAATTTCAAGAAA+CGG | + | chr4_2:13618318-13618337 | None:intergenic | 30.0% | |
GTGATTATACCTCAATGAAT+AGG | - | chr4_2:13618335-13618354 | Msa0590260:five_prime_UTR | 30.0% | |
! | ATCTTTGATGTGATTTGTGT+TGG | - | chr4_2:13618395-13618414 | Msa0590260:five_prime_UTR | 30.0% |
AAGTTGAATGCATATGGGTT+TGG | + | chr4_2:13615186-13615205 | None:intergenic | 35.0% | |
CTGGAAAGTTGAATGCATAT+GGG | + | chr4_2:13615191-13615210 | None:intergenic | 35.0% | |
TAAAATAGTTTACCAGAGGG+GGG | + | chr4_2:13615278-13615297 | None:intergenic | 35.0% | |
!!! | CTATAATTTGTTTTGGGGTG+TGG | - | chr4_2:13615445-13615464 | Msa0590260:intron | 35.0% |
ATTGAATTCCGGCAACTTAT+TGG | - | chr4_2:13615532-13615551 | Msa0590260:intron | 35.0% | |
TTGAATTCCGGCAACTTATT+GGG | - | chr4_2:13615533-13615552 | Msa0590260:intron | 35.0% | |
!!! | CGGTTTCGTTTTAAAAACAC+CGG | + | chr4_2:13615624-13615643 | None:intergenic | 35.0% |
!!! | CGGTGTTTTTAAAACGAAAC+CGG | - | chr4_2:13615622-13615641 | Msa0590260:intron | 35.0% |
GGAGAATATTCTAACAGACT+TGG | - | chr4_2:13615885-13615904 | Msa0590260:intron | 35.0% | |
GTTTAAAAACCAGACTGAAC+TGG | + | chr4_2:13616090-13616109 | None:intergenic | 35.0% | |
!! | TAGTAGTTAATAGCGGATAG+CGG | - | chr4_2:13616202-13616221 | Msa0590260:intron | 35.0% |
! | TATCCCGCTATAGCATTTTT+GGG | + | chr4_2:13616243-13616262 | None:intergenic | 35.0% |
TTGTACAAACAGAAACAGAG+AGG | - | chr4_2:13616407-13616426 | Msa0590260:CDS | 35.0% | |
TGTACAAACAGAAACAGAGA+GGG | - | chr4_2:13616408-13616427 | Msa0590260:CDS | 35.0% | |
TGCAAAACACAAAACGCAAA+AGG | + | chr4_2:13616541-13616560 | None:intergenic | 35.0% | |
! | AGAGAGAAGCTGAACTTTTT+AGG | - | chr4_2:13616591-13616610 | Msa0590260:intron | 35.0% |
CTACTATGCTCGTAAATATG+TGG | - | chr4_2:13616848-13616867 | Msa0590260:intron | 35.0% | |
!! | GTTCTGGATGCATTTTTCTT+AGG | - | chr4_2:13616999-13617018 | Msa0590260:intron | 35.0% |
! | AAGTACAGGAATTTCAGGTA+AGG | - | chr4_2:13617117-13617136 | Msa0590260:intron | 35.0% |
ATTGTGTTGTGCTGGATTTA+TGG | - | chr4_2:13617153-13617172 | Msa0590260:intron | 35.0% | |
TAAAGTTGAACAACAACAGC+AGG | + | chr4_2:13617288-13617307 | None:intergenic | 35.0% | |
GTTGGACGTTAATGTTCAAT+CGG | - | chr4_2:13617457-13617476 | Msa0590260:intron | 35.0% | |
TCGGCTATACTAATAATAGC+TGG | - | chr4_2:13617476-13617495 | Msa0590260:intron | 35.0% | |
! | ATGTTGTTACTTGTATTGGG+GGG | - | chr4_2:13617537-13617556 | Msa0590260:intron | 35.0% |
! | ATTGGCCAAATGTACCATTT+TGG | + | chr4_2:13617649-13617668 | None:intergenic | 35.0% |
GACACAAAAATGACACTTGT+CGG | + | chr4_2:13617815-13617834 | None:intergenic | 35.0% | |
GTGTCTGTATACCAATCTAA+TGG | - | chr4_2:13617860-13617879 | Msa0590260:intron | 35.0% | |
ATCTAACATAGTCCCATAAG+CGG | + | chr4_2:13617903-13617922 | None:intergenic | 35.0% | |
! | TCTTATACAGGAAGAAGTGT+TGG | - | chr4_2:13617959-13617978 | Msa0590260:intron | 35.0% |
! | AGTGGGCTCAATGTATATTT+CGG | + | chr4_2:13618156-13618175 | None:intergenic | 35.0% |
CATTCCAATTTCAAGAAACG+GGG | + | chr4_2:13618316-13618335 | None:intergenic | 35.0% | |
AAGTGAACACCTATTCATTG+AGG | + | chr4_2:13618347-13618366 | None:intergenic | 35.0% | |
!!! | GAAAAGGTTTTGGAGAACCT+AGG | + | chr4_2:13615140-13615159 | None:intergenic | 40.0% |
! | GAGGATGTTGGAAAAGGTTT+TGG | + | chr4_2:13615150-13615169 | None:intergenic | 40.0% |
CATATGGGTTTGGAAGAAGA+AGG | + | chr4_2:13615176-13615195 | None:intergenic | 40.0% | |
GCTGGAAAGTTGAATGCATA+TGG | + | chr4_2:13615192-13615211 | None:intergenic | 40.0% | |
AACTTTCCAGCTGCAACAAA+AGG | - | chr4_2:13615201-13615220 | Msa0590260:exon | 40.0% | |
! | AAAACTCCTTTTGTTGCAGC+TGG | + | chr4_2:13615210-13615229 | None:intergenic | 40.0% |
! | AAAAGGAGTTTTCAGACCAC+TGG | - | chr4_2:13615218-13615237 | Msa0590260:CDS | 40.0% |
TGTAACAATACCTTCTTCCC+TGG | - | chr4_2:13615248-13615267 | Msa0590260:CDS | 40.0% | |
!!! | TAATTTGTTTTGGGGTGTGG+TGG | - | chr4_2:13615448-13615467 | Msa0590260:intron | 40.0% |
!!! | AATTTGTTTTGGGGTGTGGT+GGG | - | chr4_2:13615449-13615468 | Msa0590260:intron | 40.0% |
AACGAAACCGGAAATCAAAC+CGG | - | chr4_2:13615634-13615653 | Msa0590260:intron | 40.0% | |
AAACACATACTCCTCGGATT+AGG | + | chr4_2:13615781-13615800 | None:intergenic | 40.0% | |
TCTAGGAAACACATACTCCT+CGG | + | chr4_2:13615787-13615806 | None:intergenic | 40.0% | |
! | TTCTAACAGACTTGGTCACT+TGG | - | chr4_2:13615893-13615912 | Msa0590260:intron | 40.0% |
GACCAATTTGCCAATTGGTT+TGG | + | chr4_2:13616049-13616068 | None:intergenic | 40.0% | |
TAAAAACCAGACTGAACTGG+TGG | + | chr4_2:13616087-13616106 | None:intergenic | 40.0% | |
! | ATCCCGCTATAGCATTTTTG+GGG | + | chr4_2:13616242-13616261 | None:intergenic | 40.0% |
! | CTATCCCGCTATAGCATTTT+TGG | + | chr4_2:13616244-13616263 | None:intergenic | 40.0% |
! | TTTTGTGGACAACATAGCCA+TGG | + | chr4_2:13616323-13616342 | None:intergenic | 40.0% |
ACGAGCATAGTAGTCAATAG+CGG | + | chr4_2:13616841-13616860 | None:intergenic | 40.0% | |
TATGTGAATCATGTAGGCGA+TGG | - | chr4_2:13616957-13616976 | Msa0590260:intron | 40.0% | |
TAGCAGCAGCAAAAATGTTC+TGG | - | chr4_2:13616983-13617002 | Msa0590260:intron | 40.0% | |
! | ATCTCATATGGGTTTGCTTC+AGG | - | chr4_2:13617209-13617228 | Msa0590260:intron | 40.0% |
! | TCTCATATGGGTTTGCTTCA+GGG | - | chr4_2:13617210-13617229 | Msa0590260:intron | 40.0% |
TCTTCAAGTAGAGGCTATAG+TGG | - | chr4_2:13617327-13617346 | Msa0590260:intron | 40.0% | |
TAGTCTATAGTTGGGCACTT+GGG | - | chr4_2:13617435-13617454 | Msa0590260:intron | 40.0% | |
!! | GCTTGAATCTGAAGTGTTGA+TGG | + | chr4_2:13617781-13617800 | None:intergenic | 40.0% |
TTCTGTAGAAGCTGTAGACT+CGG | + | chr4_2:13618054-13618073 | None:intergenic | 40.0% | |
ATATACATTGAGCCCACTGA+AGG | - | chr4_2:13618158-13618177 | Msa0590260:CDS | 40.0% | |
TATACATTGAGCCCACTGAA+GGG | - | chr4_2:13618159-13618178 | Msa0590260:CDS | 40.0% | |
! | GTGTGTGTCTGTCTCTGTTT+TGG | - | chr4_2:13615054-13615073 | Msa0590260:three_prime_UTR | 45.0% |
AGGTTGTTGGAGATGGTGAA+GGG | + | chr4_2:13615109-13615128 | None:intergenic | 45.0% | |
AAGGTTGTTGGAGATGGTGA+AGG | + | chr4_2:13615110-13615129 | None:intergenic | 45.0% | |
AGGAACGAGGATGTTGGAAA+AGG | + | chr4_2:13615156-13615175 | None:intergenic | 45.0% | |
AGAAGAAGGAACGAGGATGT+TGG | + | chr4_2:13615162-13615181 | None:intergenic | 45.0% | |
GTTTGGAAGAAGAAGGAACG+AGG | + | chr4_2:13615169-13615188 | None:intergenic | 45.0% | |
ATTGTTACAGCGAAGTCCAG+TGG | + | chr4_2:13615237-13615256 | None:intergenic | 45.0% | |
AACAATACCTTCTTCCCTGG+TGG | - | chr4_2:13615251-13615270 | Msa0590260:CDS | 45.0% | |
ACAATACCTTCTTCCCTGGT+GGG | - | chr4_2:13615252-13615271 | Msa0590260:CDS | 45.0% | |
!! | TAGCTCACCGGTTTGATTTC+CGG | + | chr4_2:13615644-13615663 | None:intergenic | 45.0% |
GATTAGGCATGTTCTGGTGT+CGG | + | chr4_2:13615765-13615784 | None:intergenic | 45.0% | |
ACCAGACTGTGTTACAAGCA+CGG | - | chr4_2:13616023-13616042 | Msa0590260:intron | 45.0% | |
GGCCAAACCAATTGGCAAAT+TGG | - | chr4_2:13616044-13616063 | Msa0590260:intron | 45.0% | |
GAACGGACCAATTTGCCAAT+TGG | + | chr4_2:13616054-13616073 | None:intergenic | 45.0% | |
TTGAATCCACCAGTTCAGTC+TGG | - | chr4_2:13616078-13616097 | Msa0590260:intron | 45.0% | |
!!! | CGCTATAGCATTTTTGGGGT+CGG | + | chr4_2:13616238-13616257 | None:intergenic | 45.0% |
CGACCCCAAAAATGCTATAG+CGG | - | chr4_2:13616236-13616255 | Msa0590260:intron | 45.0% | |
GACCCCAAAAATGCTATAGC+GGG | - | chr4_2:13616237-13616256 | Msa0590260:intron | 45.0% | |
AGAGAGGGCAGAATGAAGTT+TGG | - | chr4_2:13616423-13616442 | Msa0590260:intron | 45.0% | |
CAATTGGCATTGTGTTGTGC+TGG | - | chr4_2:13617145-13617164 | Msa0590260:intron | 45.0% | |
!! | GCTAGAGCATTGTAGCGTTT+AGG | - | chr4_2:13617351-13617370 | Msa0590260:intron | 45.0% |
GTAGTCTATAGTTGGGCACT+TGG | - | chr4_2:13617434-13617453 | Msa0590260:intron | 45.0% | |
GGGGGGTTGTCAAATTATCT+AGG | - | chr4_2:13617554-13617573 | Msa0590260:intron | 45.0% | |
GGACAGAGCCAAAAAAGCAA+AGG | - | chr4_2:13617980-13617999 | Msa0590260:intron | 45.0% | |
TACAGCTTCTACAGAAGTCG+TGG | - | chr4_2:13618058-13618077 | Msa0590260:intron | 45.0% | |
!! | GTGGTGGATACATCTACTTC+AGG | - | chr4_2:13618077-13618096 | Msa0590260:intron | 45.0% |
CTGTACGGAAGTAACTGGAT+CGG | + | chr4_2:13618120-13618139 | None:intergenic | 45.0% | |
GTAGACTGTACGGAAGTAAC+TGG | + | chr4_2:13618125-13618144 | None:intergenic | 45.0% | |
GGATGCATCAGTAGACTGTA+CGG | + | chr4_2:13618135-13618154 | None:intergenic | 45.0% | |
ATACATTGAGCCCACTGAAG+GGG | - | chr4_2:13618160-13618179 | Msa0590260:CDS | 45.0% | |
TGGTCCCCGTTTCTTGAAAT+TGG | - | chr4_2:13618309-13618328 | Msa0590260:exon | 45.0% | |
GGTTGTTGGAGATGGTGAAG+GGG | + | chr4_2:13615108-13615127 | None:intergenic | 50.0% | |
GAAGCGAAGGTTGTTGGAGA+TGG | + | chr4_2:13615116-13615135 | None:intergenic | 50.0% | |
CTAGGAGAAGCGAAGGTTGT+TGG | + | chr4_2:13615122-13615141 | None:intergenic | 50.0% | |
CAACAACCTTCGCTTCTCCT+AGG | - | chr4_2:13615120-13615139 | Msa0590260:three_prime_UTR | 50.0% | |
AACCGGTGAGCTATGAAGCA+CGG | - | chr4_2:13615651-13615670 | Msa0590260:intron | 50.0% | |
ACCAGAACATGCCTAATCCG+AGG | - | chr4_2:13615767-13615786 | Msa0590260:intron | 50.0% | |
! | TCCTCGGATTAGGCATGTTC+TGG | + | chr4_2:13615771-13615790 | None:intergenic | 50.0% |
ACAAGCACGGCCAAACCAAT+TGG | - | chr4_2:13616036-13616055 | Msa0590260:intron | 50.0% | |
TTGGCAAATTGGTCCGTTCC+TGG | - | chr4_2:13616055-13616074 | Msa0590260:intron | 50.0% | |
!! | CTGGTGGATTCAACCAGGAA+CGG | + | chr4_2:13616071-13616090 | None:intergenic | 50.0% |
!! | CTGAACTGGTGGATTCAACC+AGG | + | chr4_2:13616076-13616095 | None:intergenic | 50.0% |
AACATAGCCATGGCAGCATC+AGG | + | chr4_2:13616313-13616332 | None:intergenic | 50.0% | |
GTGAGATAGCGCTGCTATAG+CGG | + | chr4_2:13616742-13616761 | None:intergenic | 50.0% | |
TATCTCACACCGCAACGCTA+TGG | - | chr4_2:13616754-13616773 | Msa0590260:intron | 50.0% | |
GGTGAGCTCTTGAGTACAGT+TGG | - | chr4_2:13617068-13617087 | Msa0590260:intron | 50.0% | |
CTATAGTTGGGCACTTGGGT+TGG | - | chr4_2:13617439-13617458 | Msa0590260:intron | 50.0% | |
AGCTTCTACAGAAGTCGTGG+TGG | - | chr4_2:13618061-13618080 | Msa0590260:intron | 50.0% | |
AGATGGTGAAGGGGAGAGAC+TGG | + | chr4_2:13615099-13615118 | None:intergenic | 55.0% | |
GGAGAACCTAGGAGAAGCGA+AGG | + | chr4_2:13615129-13615148 | None:intergenic | 55.0% | |
!!! | TTGTTTTGGGGTGTGGTGGG+TGG | - | chr4_2:13615452-13615471 | Msa0590260:intron | 55.0% |
!!! | TGTTTTGGGGTGTGGTGGGT+GGG | - | chr4_2:13615453-13615472 | Msa0590260:intron | 55.0% |
GTCCGTGCTTCATAGCTCAC+CGG | + | chr4_2:13615656-13615675 | None:intergenic | 55.0% | |
GAGCTATGAAGCACGGACAC+TGG | - | chr4_2:13615658-13615677 | Msa0590260:intron | 55.0% | |
GCCGTGCTTGTAACACAGTC+TGG | + | chr4_2:13616027-13616046 | None:intergenic | 55.0% | |
ACCAGAACCTGATGCTGCCA+TGG | - | chr4_2:13616303-13616322 | Msa0590260:CDS | 55.0% | |
! | AACGCTGCGTAGCGGTTTTG+CGG | + | chr4_2:13616716-13616735 | None:intergenic | 55.0% |
CGCAACAAGCCATAGCGTTG+CGG | + | chr4_2:13616766-13616785 | None:intergenic | 55.0% | |
GGTCAATAGCGCCGCTATAG+CGG | + | chr4_2:13616820-13616839 | None:intergenic | 55.0% | |
GAGCGCATTGAGTCGACACT+TGG | - | chr4_2:13617047-13617066 | Msa0590260:intron | 55.0% | |
! | AAGCTACAGAGGCACAACCG+CGG | - | chr4_2:13618018-13618037 | Msa0590260:intron | 55.0% |
GCCATGGCAGCATCAGGTTC+TGG | + | chr4_2:13616307-13616326 | None:intergenic | 60.0% | |
! | ACGCTGCGTAGCGGTTTTGC+GGG | + | chr4_2:13616715-13616734 | None:intergenic | 60.0% |
!! | TGGCTTGTTGCGTAGCGCTC+CGG | - | chr4_2:13616774-13616793 | Msa0590260:intron | 60.0% |
AGCAGCGCGTGAAGCTACAG+AGG | - | chr4_2:13618007-13618026 | Msa0590260:intron | 60.0% | |
! | AGCTACAGAGGCACAACCGC+GGG | - | chr4_2:13618019-13618038 | Msa0590260:intron | 60.0% |
CATTGAGCCCACTGAAGGGG+AGG | - | chr4_2:13618163-13618182 | Msa0590260:CDS | 60.0% | |
GTGGGATCCTCCCCTTCAGT+GGG | + | chr4_2:13618173-13618192 | None:intergenic | 60.0% | |
TGTGGGATCCTCCCCTTCAG+TGG | + | chr4_2:13618174-13618193 | None:intergenic | 60.0% | |
! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr4_2:13616212-13616231 | Msa0590260:intron | 65.0% |
! | TGCGTAGCGGTTTTGCGGGC+GGG | + | chr4_2:13616711-13616730 | None:intergenic | 65.0% |
! | CTGCGTAGCGGTTTTGCGGG+CGG | + | chr4_2:13616712-13616731 | None:intergenic | 65.0% |
! | GCTACAGAGGCACAACCGCG+GGG | - | chr4_2:13618020-13618039 | Msa0590260:intron | 65.0% |
GACTCGGAAACCAGTCCCCG+CGG | + | chr4_2:13618038-13618057 | None:intergenic | 65.0% | |
TACCAGAGGGGGGCCCACCA+GGG | + | chr4_2:13615268-13615287 | None:intergenic | 70.0% | |
TTACCAGAGGGGGGCCCACC+AGG | + | chr4_2:13615269-13615288 | None:intergenic | 70.0% | |
!!! | GCGGTTTTGCGGGCGGGTTG+CGG | + | chr4_2:13616705-13616724 | None:intergenic | 70.0% |
AGCGGCGCAACGCTGCGTAG+CGG | + | chr4_2:13616724-13616743 | None:intergenic | 70.0% | |
! | AGAGGCACAACCGCGGGGAC+TGG | - | chr4_2:13618025-13618044 | Msa0590260:intron | 70.0% |
GGGGGGCCCACCAGGGAAGA+AGG | + | chr4_2:13615261-13615280 | None:intergenic | 75.0% | |
! | TTCCCTGGTGGGCCCCCCTC+TGG | - | chr4_2:13615263-13615282 | Msa0590260:CDS | 75.0% |
GCTATAGCGGCCGCGCGGTG+CGG | + | chr4_2:13616807-13616826 | None:intergenic | 75.0% | |
GCACCGCGCGGCCGCTATAG+CGG | - | chr4_2:13616806-13616825 | Msa0590260:intron | 75.0% | |
! | GCGCCGCTATAGCGGCCGCG+CGG | + | chr4_2:13616812-13616831 | None:intergenic | 80.0% |
! | CGCGCGGTGCGGTGCGGTGC+CGG | + | chr4_2:13616796-13616815 | None:intergenic | 85.0% |
! | CGGCACCGCACCGCACCGCG+CGG | - | chr4_2:13616794-13616813 | Msa0590260:intron | 85.0% |
! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr4_2:13616802-13616821 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 13614995 | 13618418 | 13614995 | ID=Msa0590260;Name=Msa0590260 |
chr4_2 | mRNA | 13614995 | 13618418 | 13614995 | ID=Msa0590260-mRNA-1;Parent=Msa0590260;Name=Msa0590260-mRNA-1;_AED=0.07;_eAED=0.07;_QI=91|1|1|1|1|1|3|213|198 |
chr4_2 | exon | 13614995 | 13615444 | 13614995 | ID=Msa0590260-mRNA-1:exon:3964;Parent=Msa0590260-mRNA-1 |
chr4_2 | exon | 13616280 | 13616440 | 13616280 | ID=Msa0590260-mRNA-1:exon:3963;Parent=Msa0590260-mRNA-1 |
chr4_2 | exon | 13618129 | 13618418 | 13618129 | ID=Msa0590260-mRNA-1:exon:3962;Parent=Msa0590260-mRNA-1 |
chr4_2 | five_prime_UTR | 13618328 | 13618418 | 13618328 | ID=Msa0590260-mRNA-1:five_prime_utr;Parent=Msa0590260-mRNA-1 |
chr4_2 | CDS | 13618129 | 13618327 | 13618129 | ID=Msa0590260-mRNA-1:cds;Parent=Msa0590260-mRNA-1 |
chr4_2 | CDS | 13616280 | 13616440 | 13616280 | ID=Msa0590260-mRNA-1:cds;Parent=Msa0590260-mRNA-1 |
chr4_2 | CDS | 13615208 | 13615444 | 13615208 | ID=Msa0590260-mRNA-1:cds;Parent=Msa0590260-mRNA-1 |
chr4_2 | three_prime_UTR | 13614995 | 13615207 | 13614995 | ID=Msa0590260-mRNA-1:three_prime_utr;Parent=Msa0590260-mRNA-1 |
Gene Sequence |
Protein sequence |