Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712910 | RHN54390.1 | 83.735 | 498 | 52 | 5 | 1 | 479 | 1 | 488 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712910 | sp|Q05753|AKRP_ARATH | 50.957 | 418 | 184 | 6 | 40 | 451 | 17 | 419 | 2.29e-134 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712910 | A0A396HLZ4 | 83.735 | 498 | 52 | 5 | 1 | 479 | 1 | 488 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009530 | Msa0712910 | 0.805876 | 1.080014e-49 | -8.615850e-47 |
| Msa0009560 | Msa0712910 | 0.804373 | 2.228163e-49 | -8.615850e-47 |
| Msa0021980 | Msa0712910 | 0.808231 | 3.429053e-50 | -8.615850e-47 |
| Msa0027030 | Msa0712910 | 0.803256 | 3.802146e-49 | -8.615850e-47 |
| Msa0034100 | Msa0712910 | 0.843104 | 1.719782e-58 | -8.615850e-47 |
| Msa0036990 | Msa0712910 | 0.823293 | 1.497671e-53 | -8.615850e-47 |
| Msa0040420 | Msa0712910 | 0.817818 | 2.706748e-52 | -8.615850e-47 |
| Msa0041780 | Msa0712910 | 0.813501 | 2.479387e-51 | -8.615850e-47 |
| Msa0050320 | Msa0712910 | 0.804997 | 1.651096e-49 | -8.615850e-47 |
| Msa0053960 | Msa0712910 | 0.811542 | 6.645361e-51 | -8.615850e-47 |
| Msa0072390 | Msa0712910 | 0.814735 | 1.324422e-51 | -8.615850e-47 |
| Msa0081290 | Msa0712910 | 0.811757 | 5.969097e-51 | -8.615850e-47 |
| Msa0081790 | Msa0712910 | 0.824404 | 8.221595e-54 | -8.615850e-47 |
| Msa0085580 | Msa0712910 | 0.809615 | 1.733222e-50 | -8.615850e-47 |
| Msa0087130 | Msa0712910 | 0.852581 | 4.203932e-61 | -8.615850e-47 |
| Msa0091090 | Msa0712910 | 0.823459 | 1.369232e-53 | -8.615850e-47 |
| Msa0117300 | Msa0712910 | 0.812795 | 3.541292e-51 | -8.615850e-47 |
| Msa0120320 | Msa0712910 | 0.821801 | 3.328807e-53 | -8.615850e-47 |
| Msa0608940 | Msa0712910 | 0.852829 | 3.571288e-61 | -8.615850e-47 |
| Msa0615430 | Msa0712910 | 0.820213 | 7.726056e-53 | -8.615850e-47 |
| Msa0649530 | Msa0712910 | 0.849058 | 4.125638e-60 | -8.615850e-47 |
| Msa0654880 | Msa0712910 | 0.818893 | 1.545699e-52 | -8.615850e-47 |
| Msa0659020 | Msa0712910 | 0.848215 | 7.062759e-60 | -8.615850e-47 |
| Msa0688880 | Msa0712910 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0691740 | Msa0712910 | 0.846704 | 1.837576e-59 | -8.615850e-47 |
| Msa0693400 | Msa0712910 | 0.842181 | 3.023834e-58 | -8.615850e-47 |
| Msa0698480 | Msa0712910 | 0.822922 | 1.828129e-53 | -8.615850e-47 |
| Msa0698650 | Msa0712910 | 0.820137 | 8.040200e-53 | -8.615850e-47 |
| Msa0702200 | Msa0712910 | 0.816596 | 5.097578e-52 | -8.615850e-47 |
| Msa0702310 | Msa0712910 | 0.805731 | 1.158480e-49 | -8.615850e-47 |
| Msa0702360 | Msa0712910 | 0.811820 | 5.781748e-51 | -8.615850e-47 |
| Msa0702560 | Msa0712910 | 0.808588 | 2.876870e-50 | -8.615850e-47 |
| Msa0702620 | Msa0712910 | 0.802592 | 5.213475e-49 | -8.615850e-47 |
| Msa0705810 | Msa0712910 | 0.802823 | 4.672657e-49 | -8.615850e-47 |
| Msa0712670 | Msa0712910 | 0.800097 | 1.690695e-48 | -8.615850e-47 |
| Msa0712910 | Msa0714060 | 0.811477 | 6.865930e-51 | -8.615850e-47 |
| Msa0712910 | Msa0714200 | 0.809997 | 1.434553e-50 | -8.615850e-47 |
| Msa0712910 | Msa0727300 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
| Msa0712910 | Msa0733240 | 0.815530 | 8.819474e-52 | -8.615850e-47 |
| Msa0712910 | Msa0742090 | 0.800238 | 1.583151e-48 | -8.615850e-47 |
| Msa0712910 | Msa0748980 | 0.815263 | 1.011188e-51 | -8.615850e-47 |
| Msa0712910 | Msa0756440 | 0.837704 | 4.442702e-57 | -8.615850e-47 |
| Msa0712910 | Msa0774360 | 0.833107 | 6.448775e-56 | -8.615850e-47 |
| Msa0712910 | Msa0776590 | 0.808896 | 2.471925e-50 | -8.615850e-47 |
| Msa0712910 | Msa0791120 | 0.826041 | 3.371512e-54 | -8.615850e-47 |
| Msa0712910 | Msa0793100 | 0.810168 | 1.318325e-50 | -8.615850e-47 |
| Msa0712910 | Msa0797980 | 0.800003 | 1.766753e-48 | -8.615850e-47 |
| Msa0712910 | Msa0803530 | 0.860112 | 2.591057e-63 | -8.615850e-47 |
| Msa0712910 | Msa0812020 | 0.811050 | 8.498319e-51 | -8.615850e-47 |
| Msa0712910 | Msa0813630 | 0.817080 | 3.968756e-52 | -8.615850e-47 |
| Msa0712910 | Msa0825520 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
| Msa0712910 | Msa0834200 | 0.800348 | 1.503077e-48 | -8.615850e-47 |
| Msa0712910 | Msa0835550 | 0.834082 | 3.682007e-56 | -8.615850e-47 |
| Msa0712910 | Msa0849290 | 0.813625 | 2.328031e-51 | -8.615850e-47 |
| Msa0712910 | Msa0852090 | 0.837738 | 4.354297e-57 | -8.615850e-47 |
| Msa0712910 | Msa0861480 | 0.839447 | 1.576080e-57 | -8.615850e-47 |
| Msa0712910 | Msa0861560 | 0.808794 | 2.599285e-50 | -8.615850e-47 |
| Msa0712910 | Msa0864730 | 0.807983 | 3.871325e-50 | -8.615850e-47 |
| Msa0712910 | Msa0864750 | 0.808943 | 2.415819e-50 | -8.615850e-47 |
| Msa0712910 | Msa0868040 | 0.801473 | 8.856236e-49 | -8.615850e-47 |
| Msa0712910 | Msa0884840 | 0.800592 | 1.340683e-48 | -8.615850e-47 |
| Msa0712910 | Msa0927890 | 0.810815 | 9.554791e-51 | -8.615850e-47 |
| Msa0712910 | Msa0950470 | 0.827660 | 1.383948e-54 | -8.615850e-47 |
| Msa0712910 | Msa0950570 | 0.822209 | 2.677149e-53 | -8.615850e-47 |
| Msa0712910 | Msa0967260 | 0.809068 | 2.271093e-50 | -8.615850e-47 |
| Msa0712910 | Msa0967900 | 0.826069 | 3.320294e-54 | -8.615850e-47 |
| Msa0712910 | Msa0999480 | 0.807341 | 5.300720e-50 | -8.615850e-47 |
| Msa0712910 | Msa0999590 | 0.841448 | 4.722377e-58 | -8.615850e-47 |
| Msa0712910 | Msa1010470 | 0.804248 | 2.366057e-49 | -8.615850e-47 |
| Msa0712910 | Msa1031530 | 0.859707 | 3.432266e-63 | -8.615850e-47 |
| Msa0712910 | Msa1038110 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0712910 | Msa1043020 | 0.800869 | 1.177234e-48 | -8.615850e-47 |
| Msa0712910 | Msa1052030 | 0.818990 | 1.468599e-52 | -8.615850e-47 |
| Msa0712910 | Msa1070630 | 0.822537 | 2.246275e-53 | -8.615850e-47 |
| Msa0712910 | Msa1071310 | 0.819974 | 8.758984e-53 | -8.615850e-47 |
| Msa0712910 | Msa1078600 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0712910 | Msa1088740 | 0.804146 | 2.485287e-49 | -8.615850e-47 |
| Msa0712910 | Msa1096510 | 0.806073 | 9.820739e-50 | -8.615850e-47 |
| Msa0712910 | Msa1096520 | 0.809804 | 1.578838e-50 | -8.615850e-47 |
| Msa0712910 | Msa1096570 | 0.811071 | 8.410656e-51 | -8.615850e-47 |
| Msa0712910 | Msa1101300 | 0.853566 | 2.195330e-61 | -8.615850e-47 |
| Msa0712910 | Msa1101610 | 0.805763 | 1.141009e-49 | -8.615850e-47 |
| Msa0712910 | Msa1113280 | 0.803028 | 4.237324e-49 | -8.615850e-47 |
| Msa0712910 | Msa1118770 | 0.811464 | 6.909320e-51 | -8.615850e-47 |
| Msa0712910 | Msa1125450 | 0.808188 | 3.500652e-50 | -8.615850e-47 |
| Msa0712910 | Msa1129660 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0712910 | Msa1133440 | 0.805831 | 1.104081e-49 | -8.615850e-47 |
| Msa0712910 | Msa1143860 | 0.810497 | 1.119337e-50 | -8.615850e-47 |
| Msa0712910 | Msa1158450 | 0.821229 | 4.512434e-53 | -8.615850e-47 |
| Msa0712910 | Msa1158650 | 0.821777 | 3.371517e-53 | -8.615850e-47 |
| Msa0712910 | Msa1164570 | 0.821738 | 3.442366e-53 | -8.615850e-47 |
| Msa0712910 | Msa1182400 | 0.814001 | 1.924119e-51 | -8.615850e-47 |
| Msa0712910 | Msa1190350 | 0.822561 | 2.217420e-53 | -8.615850e-47 |
| Msa0712910 | Msa1211260 | 0.810675 | 1.024688e-50 | -8.615850e-47 |
| Msa0712910 | Msa1219060 | 0.826064 | 3.329937e-54 | -8.615850e-47 |
| Msa0712910 | Msa1224820 | 0.807686 | 4.476905e-50 | -8.615850e-47 |
| Msa0712910 | Msa1225140 | 0.811909 | 5.528840e-51 | -8.615850e-47 |
| Msa0712910 | Msa1228280 | 0.803054 | 4.187034e-49 | -8.615850e-47 |
| Msa0712910 | Msa1230190 | 0.814148 | 1.785325e-51 | -8.615850e-47 |
| Msa0712910 | Msa1236860 | 0.812683 | 3.747547e-51 | -8.615850e-47 |
| Msa0712910 | Msa1240240 | 0.803624 | 3.189433e-49 | -8.615850e-47 |
| Msa0712910 | Msa1243630 | 0.834957 | 2.219132e-56 | -8.615850e-47 |
| Msa0712910 | Msa1244220 | 0.837729 | 4.377048e-57 | -8.615850e-47 |
| Msa0712910 | Msa1266120 | 0.810541 | 1.095018e-50 | -8.615850e-47 |
| Msa0712910 | Msa1272770 | 0.815621 | 8.418814e-52 | -8.615850e-47 |
| Msa0712910 | Msa1286950 | 0.821958 | 3.060854e-53 | -8.615850e-47 |
| Msa0712910 | Msa1288970 | 0.812274 | 4.603574e-51 | -8.615850e-47 |
| Msa0712910 | Msa1297220 | 0.809226 | 2.100736e-50 | -8.615850e-47 |
| Msa0712910 | Msa1317240 | 0.813768 | 2.165968e-51 | -8.615850e-47 |
| Msa0712910 | Msa1319230 | 0.811707 | 6.118166e-51 | -8.615850e-47 |
| Msa0712910 | Msa1323260 | 0.817830 | 2.690846e-52 | -8.615850e-47 |
| Msa0712910 | Msa1332690 | 0.815998 | 6.934232e-52 | -8.615850e-47 |
| Msa0712910 | Msa1343450 | 0.838126 | 3.460968e-57 | -8.615850e-47 |
| Msa0712910 | Msa1346220 | 0.816856 | 4.456801e-52 | -8.615850e-47 |
| Msa0712910 | Msa1346340 | 0.823633 | 1.246856e-53 | -8.615850e-47 |
| Msa0712910 | Msa1348330 | -0.817306 | 3.531681e-52 | -8.615850e-47 |
| Msa0712910 | Msa1349640 | 0.804735 | 1.873300e-49 | -8.615850e-47 |
| Msa0712910 | Msa1352630 | 0.819631 | 1.049610e-52 | -8.615850e-47 |
| Msa0712910 | Msa1356730 | 0.802324 | 5.921712e-49 | -8.615850e-47 |
| Msa0712910 | Msa1368660 | 0.813264 | 2.794941e-51 | -8.615850e-47 |
| Msa0712910 | Msa1369180 | 0.802719 | 4.909760e-49 | -8.615850e-47 |
| Msa0712910 | Msa1376010 | 0.811548 | 6.626427e-51 | -8.615850e-47 |
| Msa0712910 | Msa1382750 | 0.836876 | 7.234990e-57 | -8.615850e-47 |
| Msa0712910 | Msa1384620 | 0.806469 | 8.101644e-50 | -8.615850e-47 |
| Msa0712910 | Msa1386250 | 0.819714 | 1.004725e-52 | -8.615850e-47 |
| Msa0712910 | Msa1388270 | 0.816534 | 5.263905e-52 | -8.615850e-47 |
| Msa0712910 | Msa1398460 | -0.809467 | 1.865392e-50 | -8.615850e-47 |
| Msa0712910 | Msa1400290 | 0.802120 | 6.521508e-49 | -8.615850e-47 |
| Msa0712910 | Msa1401000 | 0.810432 | 1.156338e-50 | -8.615850e-47 |
| Msa0712910 | Msa1412740 | 0.812976 | 3.233311e-51 | -8.615850e-47 |
| Msa0712910 | Msa1413900 | 0.803723 | 3.042589e-49 | -8.615850e-47 |
| Msa0712910 | Msa1418840 | 0.807598 | 4.673612e-50 | -8.615850e-47 |
| Msa0712910 | Msa1419230 | 0.806434 | 8.241575e-50 | -8.615850e-47 |
| Msa0712910 | Msa1432250 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
| Msa0712910 | Msa1436660 | 0.811437 | 7.005556e-51 | -8.615850e-47 |
| Msa0712910 | Msa1450630 | 0.840996 | 6.209388e-58 | -8.615850e-47 |
| Msa0712910 | Msa1450780 | 0.803975 | 2.697392e-49 | -8.615850e-47 |
| Msa0712910 | Msa1450850 | 0.821132 | 4.750198e-53 | -8.615850e-47 |
| Msa0712910 | Msa1451690 | 0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa0712910 | Msa1456620 | 0.830618 | 2.653272e-55 | -8.615850e-47 |
| Msa0712910 | Msa1459630 | 0.824803 | 6.622475e-54 | -8.615850e-47 |
| Msa0712910 | Msa1460530 | 0.800243 | 1.579484e-48 | -8.615850e-47 |
| Msa0128110 | Msa0712910 | 0.844683 | 6.496964e-59 | -8.615850e-47 |
| Msa0131090 | Msa0712910 | 0.833128 | 6.371472e-56 | -8.615850e-47 |
| Msa0135470 | Msa0712910 | 0.802930 | 4.440141e-49 | -8.615850e-47 |
| Msa0143280 | Msa0712910 | 0.826443 | 2.705260e-54 | -8.615850e-47 |
| Msa0154720 | Msa0712910 | 0.807574 | 4.729353e-50 | -8.615850e-47 |
| Msa0160650 | Msa0712910 | 0.841871 | 3.652907e-58 | -8.615850e-47 |
| Msa0163960 | Msa0712910 | 0.834476 | 2.932756e-56 | -8.615850e-47 |
| Msa0178440 | Msa0712910 | 0.807153 | 5.808229e-50 | -8.615850e-47 |
| Msa0183200 | Msa0712910 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
| Msa0184330 | Msa0712910 | 0.916902 | 1.017305e-85 | -8.615850e-47 |
| Msa0184850 | Msa0712910 | 0.811674 | 6.221578e-51 | -8.615850e-47 |
| Msa0195140 | Msa0712910 | 0.812644 | 3.822342e-51 | -8.615850e-47 |
| Msa0208710 | Msa0712910 | 0.826218 | 3.061202e-54 | -8.615850e-47 |
| Msa0209370 | Msa0712910 | 0.809555 | 1.785511e-50 | -8.615850e-47 |
| Msa0209590 | Msa0712910 | 0.803474 | 3.426367e-49 | -8.615850e-47 |
| Msa0225070 | Msa0712910 | 0.814911 | 1.210162e-51 | -8.615850e-47 |
| Msa0225880 | Msa0712910 | 0.826185 | 3.116614e-54 | -8.615850e-47 |
| Msa0367590 | Msa0712910 | 0.842397 | 2.651208e-58 | -8.615850e-47 |
| Msa0372990 | Msa0712910 | 0.820994 | 5.111928e-53 | -8.615850e-47 |
| Msa0375570 | Msa0712910 | 0.801868 | 7.350043e-49 | -8.615850e-47 |
| Msa0376480 | Msa0712910 | 0.801426 | 9.053095e-49 | -8.615850e-47 |
| Msa0378310 | Msa0712910 | 0.832962 | 7.006578e-56 | -8.615850e-47 |
| Msa0378670 | Msa0712910 | 0.863358 | 2.636092e-64 | -8.615850e-47 |
| Msa0378700 | Msa0712910 | 0.861209 | 1.204730e-63 | -8.615850e-47 |
| Msa0385770 | Msa0712910 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa0404060 | Msa0712910 | 0.839587 | 1.449602e-57 | -8.615850e-47 |
| Msa0419040 | Msa0712910 | 0.810343 | 1.208285e-50 | -8.615850e-47 |
| Msa0428330 | Msa0712910 | 0.873529 | 1.370120e-67 | -8.615850e-47 |
| Msa0430040 | Msa0712910 | 0.806932 | 6.470721e-50 | -8.615850e-47 |
| Msa0431940 | Msa0712910 | 0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0436600 | Msa0712910 | 0.809253 | 2.072935e-50 | -8.615850e-47 |
| Msa0457070 | Msa0712910 | 0.803100 | 4.095410e-49 | -8.615850e-47 |
| Msa0460220 | Msa0712910 | 0.808843 | 2.537134e-50 | -8.615850e-47 |
| Msa0467710 | Msa0712910 | 0.808076 | 3.698469e-50 | -8.615850e-47 |
| Msa0468360 | Msa0712910 | 0.829520 | 4.916976e-55 | -8.615850e-47 |
| Msa0239610 | Msa0712910 | 0.801488 | 8.795495e-49 | -8.615850e-47 |
| Msa0240590 | Msa0712910 | 0.809529 | 1.809243e-50 | -8.615850e-47 |
| Msa0260470 | Msa0712910 | 0.828385 | 9.258066e-55 | -8.615850e-47 |
| Msa0267450 | Msa0712910 | 0.816512 | 5.322347e-52 | -8.615850e-47 |
| Msa0267510 | Msa0712910 | 0.809240 | 2.086420e-50 | -8.615850e-47 |
| Msa0272990 | Msa0712910 | 0.817050 | 4.032018e-52 | -8.615850e-47 |
| Msa0276800 | Msa0712910 | 0.835646 | 1.486624e-56 | -8.615850e-47 |
| Msa0303920 | Msa0712910 | -0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0304060 | Msa0712910 | 0.805813 | 1.113540e-49 | -8.615850e-47 |
| Msa0304110 | Msa0712910 | 0.831446 | 1.662063e-55 | -8.615850e-47 |
| Msa0304520 | Msa0712910 | 0.813729 | 2.208936e-51 | -8.615850e-47 |
| Msa0316720 | Msa0712910 | 0.811770 | 5.927804e-51 | -8.615850e-47 |
| Msa0341190 | Msa0712910 | 0.830832 | 2.351398e-55 | -8.615850e-47 |
| Msa0484250 | Msa0712910 | 0.917137 | 7.659139e-86 | -8.615850e-47 |
| Msa0495510 | Msa0712910 | 0.806746 | 7.080855e-50 | -8.615850e-47 |
| Msa0500490 | Msa0712910 | 0.809516 | 1.820643e-50 | -8.615850e-47 |
| Msa0518480 | Msa0712910 | 0.802007 | 6.881042e-49 | -8.615850e-47 |
| Msa0521940 | Msa0712910 | -0.822094 | 2.846586e-53 | -8.615850e-47 |
| Msa0545230 | Msa0712910 | 0.803332 | 3.666716e-49 | -8.615850e-47 |
| Msa0555510 | Msa0712910 | 0.832837 | 7.524789e-56 | -8.615850e-47 |
| Msa0556070 | Msa0712910 | 0.830848 | 2.330043e-55 | -8.615850e-47 |
| Msa0561420 | Msa0712910 | 0.822282 | 2.575114e-53 | -8.615850e-47 |
| Msa0565150 | Msa0712910 | 0.801972 | 6.996840e-49 | -8.615850e-47 |
| Msa0565760 | Msa0712910 | 0.844134 | 9.122846e-59 | -8.615850e-47 |
| Msa0565860 | Msa0712910 | 0.850664 | 1.467192e-60 | -8.615850e-47 |
| Msa0566010 | Msa0712910 | 0.829253 | 5.706980e-55 | -8.615850e-47 |
| Msa0568460 | Msa0712910 | 0.820197 | 7.787899e-53 | -8.615850e-47 |
| Msa0569230 | Msa0712910 | 0.802167 | 6.380205e-49 | -8.615850e-47 |
| Msa0579230 | Msa0712910 | 0.800546 | 1.369929e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712910 | MtrunA17_Chr5g0406201 | 83.735 | 498 | 52 | 5 | 1 | 479 | 1 | 488 | 0.0 | 803 |
| Msa0712910 | MtrunA17_Chr5g0405451 | 74.636 | 481 | 77 | 9 | 1 | 479 | 1 | 438 | 0.0 | 655 |
| Msa0712910 | MtrunA17_Chr2g0303671 | 44.865 | 185 | 100 | 2 | 268 | 451 | 124 | 307 | 1.64e-50 | 174 |
| Msa0712910 | MtrunA17_Chr5g0418551 | 31.655 | 139 | 94 | 1 | 290 | 428 | 89 | 226 | 4.93e-15 | 74.7 |
| Msa0712910 | MtrunA17_Chr5g0418551 | 32.353 | 136 | 90 | 1 | 295 | 428 | 58 | 193 | 4.26e-14 | 72.0 |
| Msa0712910 | MtrunA17_Chr5g0409271 | 30.657 | 137 | 95 | 0 | 295 | 431 | 15 | 151 | 2.45e-14 | 73.2 |
| Msa0712910 | MtrunA17_Chr5g0434371 | 37.179 | 156 | 89 | 4 | 294 | 448 | 591 | 738 | 4.62e-12 | 68.6 |
| Msa0712910 | MtrunA17_Chr2g0328031 | 30.675 | 163 | 95 | 4 | 290 | 435 | 45 | 206 | 9.21e-12 | 67.0 |
| Msa0712910 | MtrunA17_Chr3g0127131 | 34.694 | 98 | 62 | 1 | 336 | 431 | 246 | 343 | 3.57e-11 | 64.7 |
| Msa0712910 | MtrunA17_Chr6g0461061 | 24.834 | 302 | 198 | 9 | 203 | 490 | 111 | 397 | 4.26e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712910 | AT5G66055.1 | 50.957 | 418 | 184 | 6 | 40 | 451 | 17 | 419 | 2.33e-135 | 398 |
| Msa0712910 | AT5G66055.2 | 47.207 | 358 | 168 | 6 | 40 | 391 | 17 | 359 | 4.65e-99 | 303 |
| Msa0712910 | AT5G40160.1 | 46.739 | 184 | 96 | 2 | 272 | 454 | 132 | 314 | 1.91e-49 | 172 |
| Msa0712910 | AT5G40160.2 | 46.711 | 152 | 79 | 2 | 272 | 422 | 132 | 282 | 2.04e-39 | 145 |
| Msa0712910 | AT5G53470.1 | 36.000 | 100 | 62 | 1 | 334 | 431 | 225 | 324 | 3.79e-13 | 70.9 |
| Msa0712910 | AT4G27780.1 | 40.506 | 79 | 47 | 0 | 353 | 431 | 261 | 339 | 2.54e-12 | 68.6 |
| Msa0712910 | AT2G14255.1 | 32.450 | 151 | 98 | 3 | 283 | 430 | 83 | 232 | 6.91e-12 | 68.2 |
| Msa0712910 | AT2G25600.1 | 34.043 | 141 | 90 | 2 | 295 | 435 | 581 | 718 | 1.53e-11 | 67.4 |
| Msa0712910 | AT2G03430.1 | 30.216 | 139 | 96 | 1 | 290 | 428 | 82 | 219 | 4.72e-11 | 63.5 |
Find 90 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTATTTGTAGGATAAA+TGG | 0.172018 | 5_1:+4787451 | Msa0712910:intron |
| AATCCTAGGTGGGCTGTTTA+TGG | 0.193086 | 5_1:+4785642 | Msa0712910:CDS |
| TTCTTCTTTGAATTGGGTTT+TGG | 0.201950 | 5_1:-4785273 | None:intergenic |
| AGAATCTTGTTCCTGATAAA+TGG | 0.230329 | 5_1:+4785319 | Msa0712910:CDS |
| GTTGGTTCCTTTGAGGGATA+TGG | 0.236009 | 5_1:+4785473 | Msa0712910:CDS |
| TGAACTTGTTTCCATTTATC+AGG | 0.246834 | 5_1:-4785330 | None:intergenic |
| GCTCTTTACAAAGCAATAAT+TGG | 0.250325 | 5_1:+4787665 | Msa0712910:CDS |
| AAGAAGAGTGTTTGGGGTTG+AGG | 0.254417 | 5_1:-4785003 | None:intergenic |
| GACCCTGCTGCTAAGAAAAT+TGG | 0.282865 | 5_1:+4785711 | Msa0712910:CDS |
| AGGGAGAGAAGAAGAGTGTT+TGG | 0.286570 | 5_1:-4785011 | None:intergenic |
| GTGGAGCTTCTGCTGATTAA+AGG | 0.288706 | 5_1:+4788482 | Msa0712910:CDS |
| CATATGGAAACTTTAGCTTT+AGG | 0.289789 | 5_1:+4789732 | Msa0712910:three_prime_UTR |
| GGGAGAGAAGAAGAGTGTTT+GGG | 0.319442 | 5_1:-4785010 | None:intergenic |
| CTGTCGGGCGCGTCTATATA+AGG | 0.320039 | 5_1:-4789606 | None:intergenic |
| GCTGCAACAAAGTATCTAAA+AGG | 0.328401 | 5_1:-4787512 | None:intergenic |
| AGCTTATAAAGAAACTAAAT+TGG | 0.344627 | 5_1:+4785512 | Msa0712910:CDS |
| GCTATTCTTCACTTCCTTGT+TGG | 0.353333 | 5_1:-4789667 | None:intergenic |
| TTTGTGGAGGTTGCGGTTTG+TGG | 0.356508 | 5_1:-4785109 | None:intergenic |
| TTGTGGAGGTTGCGGTTTGT+GGG | 0.357117 | 5_1:-4785108 | None:intergenic |
| TCAATCTCTTGAGCTTTCTT+AGG | 0.357792 | 5_1:-4785417 | None:intergenic |
| ATTGGCTCAGCTGACGCCTT+TGG | 0.365909 | 5_1:+4785530 | Msa0712910:CDS |
| CAATGTGGATATAAATCTTC+GGG | 0.377195 | 5_1:+4788312 | Msa0712910:CDS |
| CTCTCGGGCGCGTCTATATA+AGG | 0.380106 | 5_1:-4789557 | None:intergenic |
| ATCCTAGGTGGGCTGTTTAT+GGG | 0.393025 | 5_1:+4785643 | Msa0712910:CDS |
| GACGCCTTTGGTTCTTGATA+AGG | 0.399997 | 5_1:+4785542 | Msa0712910:CDS |
| AGCAGAAGCTCCACTATATC+AGG | 0.401672 | 5_1:-4788473 | None:intergenic |
| CAGAGTTTCTCACGAGAAGA+TGG | 0.403613 | 5_1:-4787706 | None:intergenic |
| GTGAAGAGAGGGTAGAAGCT+AGG | 0.405623 | 5_1:+4785619 | Msa0712910:CDS |
| CTCACATTATCTTGCACAAA+CGG | 0.408366 | 5_1:-4787734 | None:intergenic |
| AAGAAGGTTGGTTCCTTTGA+GGG | 0.419078 | 5_1:+4785467 | Msa0712910:CDS |
| ACAATGTGGATATAAATCTT+CGG | 0.421567 | 5_1:+4788311 | Msa0712910:CDS |
| TTGCTCTGTCTTAGGATGGC+TGG | 0.424376 | 5_1:+4788417 | Msa0712910:intron |
| GAAAGGGTTGGAGGATGTTA+AGG | 0.424735 | 5_1:+4785665 | Msa0712910:CDS |
| AAAGAAGGTTGGTTCCTTTG+AGG | 0.431464 | 5_1:+4785466 | Msa0712910:CDS |
| TGATATTAATGCTATGGATA+AGG | 0.439944 | 5_1:+4787545 | Msa0712910:CDS |
| TCTCACGAGAAGATGGGTTA+TGG | 0.444360 | 5_1:-4787699 | None:intergenic |
| AGGTGGGCTGTTTATGGGAA+AGG | 0.444581 | 5_1:+4785648 | Msa0712910:CDS |
| ACAAGAGTGCTTTAATTGCT+CGG | 0.449055 | 5_1:-4788285 | None:intergenic |
| CAACAAATCCCTCTCTTCCC+AGG | 0.458338 | 5_1:-4787055 | None:intergenic |
| GTGGAGGTTGCGGTTTGTGG+GGG | 0.463790 | 5_1:-4785106 | None:intergenic |
| GGCTGTTTATGGGAAAGGGT+TGG | 0.464497 | 5_1:+4785653 | Msa0712910:CDS |
| CAAGAGTGCTTTAATTGCTC+GGG | 0.466031 | 5_1:-4788284 | None:intergenic |
| GGGTAGAAGCTAGGAATCCT+AGG | 0.467709 | 5_1:+4785628 | Msa0712910:CDS |
| TGTTTATGGGAAAGGGTTGG+AGG | 0.474904 | 5_1:+4785656 | Msa0712910:CDS |
| GCAAGCAGCTCTTCAGCATA+TGG | 0.476206 | 5_1:+4789716 | Msa0712910:three_prime_UTR |
| GACTCAGAGACCTGATATAG+TGG | 0.487183 | 5_1:+4788463 | Msa0712910:CDS |
| ACGAGGTTGTTGTCGGATGT+TGG | 0.490340 | 5_1:-4785237 | None:intergenic |
| GAAGTAGCAACTGTCAAGTC+TGG | 0.492247 | 5_1:-4787090 | None:intergenic |
| AACTTGATTAACTCGTCTCT+CGG | 0.494680 | 5_1:-4789573 | None:intergenic |
| GGTGTCTACGAGGTTGTTGT+CGG | 0.495959 | 5_1:-4785244 | None:intergenic |
| GGTGGGCTGTTTATGGGAAA+GGG | 0.497865 | 5_1:+4785649 | Msa0712910:CDS |
| AGATTGAAACACGCGGGGTG+TGG | 0.500130 | 5_1:-4785067 | None:intergenic |
| TTTATCAGGAACAAGATTCT+CGG | 0.500203 | 5_1:-4785316 | None:intergenic |
| CTCGACCTTTGCCTTTACTC+TGG | 0.500612 | 5_1:+4789488 | Msa0712910:CDS |
| CGTTGTCGTTGTTGTCATGT+TGG | 0.504827 | 5_1:-4785149 | None:intergenic |
| ACTTGATTAACTCGTCTCTC+GGG | 0.510011 | 5_1:-4789572 | None:intergenic |
| TAGATGGGTTGAGTGAAGAG+AGG | 0.516517 | 5_1:+4785607 | Msa0712910:CDS |
| AGATGGGTTGAGTGAAGAGA+GGG | 0.518172 | 5_1:+4785608 | Msa0712910:CDS |
| AAGTTATGAAGCTGAAAAGA+AGG | 0.520767 | 5_1:+4785451 | Msa0712910:CDS |
| ATAGACGCGCCCGACAGAAG+TGG | 0.523848 | 5_1:+4789612 | Msa0712910:CDS |
| TGTTGTTGATATTAATGCTA+TGG | 0.523920 | 5_1:+4787539 | Msa0712910:CDS |
| GGGGTTGAGGATTATGAACA+AGG | 0.524893 | 5_1:-4784990 | None:intergenic |
| TGGAGGTTGCGGTTTGTGGG+GGG | 0.528206 | 5_1:-4785105 | None:intergenic |
| TATGAAGCTGAAAAGAAGGT+TGG | 0.530164 | 5_1:+4785455 | Msa0712910:CDS |
| GGAGAGAAGAAGAGTGTTTG+GGG | 0.538908 | 5_1:-4785009 | None:intergenic |
| TTTGTTTACCTGGGAAGAGA+GGG | 0.546480 | 5_1:+4787047 | Msa0712910:CDS |
| TGTGGAGGTTGCGGTTTGTG+GGG | 0.546780 | 5_1:-4785107 | None:intergenic |
| GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 5_1:-4788443 | None:intergenic |
| AGAGTTTCTCACGAGAAGAT+GGG | 0.560384 | 5_1:-4787705 | None:intergenic |
| CCTGCTGCTAAGAAAATTGG+AGG | 0.571105 | 5_1:+4785714 | Msa0712910:CDS |
| TGCTGATTAAAGGTGCTGAT+CGG | 0.580074 | 5_1:+4788492 | Msa0712910:CDS |
| GAGTAAAGGCAAAGGTCGAG+TGG | 0.584489 | 5_1:-4789485 | None:intergenic |
| TTCAAATCCATATCCCTCAA+AGG | 0.588549 | 5_1:-4785480 | None:intergenic |
| TAAACATAACAAAGAAAGAA+CGG | 0.601565 | 5_1:+4785394 | Msa0712910:CDS |
| CTCGCAGCAAAAGTGTGCAA+AGG | 0.606148 | 5_1:-4787477 | None:intergenic |
| GAAACTTTAGCTTTAGGACA+AGG | 0.609493 | 5_1:+4789738 | Msa0712910:three_prime_UTR |
| TTGAGGATTATGAACAAGGG+TGG | 0.616303 | 5_1:-4784986 | None:intergenic |
| GGGTTGAGGATTATGAACAA+GGG | 0.627814 | 5_1:-4784989 | None:intergenic |
| AGAAGCTAGGAATCCTAGGT+GGG | 0.632610 | 5_1:+4785632 | Msa0712910:CDS |
| TAGAAGCTAGGAATCCTAGG+TGG | 0.636125 | 5_1:+4785631 | Msa0712910:CDS |
| TTGAAAAGATTGAAACACGC+GGG | 0.638533 | 5_1:-4785073 | None:intergenic |
| TTTGAAGATCTGGACCAACA+AGG | 0.648499 | 5_1:+4789653 | Msa0712910:CDS |
| TTGTACAGCATAGTGCATCA+AGG | 0.649508 | 5_1:-4788251 | None:intergenic |
| TTCCCATAAACAGCCCACCT+AGG | 0.650174 | 5_1:-4785645 | None:intergenic |
| AACGACGAAGAACACATCAT+CGG | 0.651065 | 5_1:+4785168 | Msa0712910:CDS |
| TTTGACCAGAGTAAAGGCAA+AGG | 0.667685 | 5_1:-4789493 | None:intergenic |
| GGAACCTTATCAAGAACCAA+AGG | 0.680338 | 5_1:-4785546 | None:intergenic |
| TACAGCATAGTGCATCAAGG+TGG | 0.722597 | 5_1:-4788248 | None:intergenic |
| TGAAAAGATTGAAACACGCG+GGG | 0.723067 | 5_1:-4785072 | None:intergenic |
| GTTGAAAAGATTGAAACACG+CGG | 0.730091 | 5_1:-4785074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAGTTAAAACAAATTTA+TGG | + | chr5_1:4786320-4786339 | Msa0712910:intron | 15.0% |
| !! | GTTAGTTAAAACAAATTTAT+GGG | + | chr5_1:4786321-4786340 | Msa0712910:intron | 15.0% |
| !!! | TATATATGGTTTTTAAATGT+TGG | + | chr5_1:4786977-4786996 | Msa0712910:intron | 15.0% |
| !! | ATTATATATTGAACTGTTAT+TGG | + | chr5_1:4787164-4787183 | Msa0712910:intron | 15.0% |
| !!! | CTCTATATTTATGTTTTTAA+TGG | + | chr5_1:4787422-4787441 | Msa0712910:intron | 15.0% |
| !! | ACTATATGTTAATAGATTAA+GGG | - | chr5_1:4788147-4788166 | None:intergenic | 15.0% |
| !! | AACTATATGTTAATAGATTA+AGG | - | chr5_1:4788148-4788167 | None:intergenic | 15.0% |
| !! | TGAAATTGATAGATTAATAT+AGG | - | chr5_1:4788551-4788570 | None:intergenic | 15.0% |
| !! | AATAATTTACAAAATAGAAG+CGG | + | chr5_1:4788632-4788651 | Msa0712910:intron | 15.0% |
| !!! | AAAACTTTCAATTGTTATTT+AGG | + | chr5_1:4789016-4789035 | Msa0712910:intron | 15.0% |
| !! | AAATATCAATGTAAAAGAAA+TGG | - | chr5_1:4789426-4789445 | None:intergenic | 15.0% |
| !! | TTTGCATAAAAATAAAAAGA+AGG | + | chr5_1:4789817-4789836 | Msa0712910:three_prime_UTR | 15.0% |
| !! | TAAAAATGTGATTTCAAATT+TGG | + | chr5_1:4789865-4789884 | Msa0712910:three_prime_UTR | 15.0% |
| !!! | CATTCAAGTTAGTTTTTTTT+TGG | - | chr5_1:4784929-4784948 | None:intergenic | 20.0% |
| !!! | AGTTTTTTCTTCTTTGAATT+GGG | - | chr5_1:4785282-4785301 | None:intergenic | 20.0% |
| !!! | TAGTTTTTTCTTCTTTGAAT+TGG | - | chr5_1:4785283-4785302 | None:intergenic | 20.0% |
| !! | TAAACATAACAAAGAAAGAA+CGG | + | chr5_1:4785394-4785413 | Msa0712910:CDS | 20.0% |
| !! | AGCTTATAAAGAAACTAAAT+TGG | + | chr5_1:4785512-4785531 | Msa0712910:CDS | 20.0% |
| !!! | TTTGTATTTACAATCTGTTT+TGG | + | chr5_1:4785740-4785759 | Msa0712910:intron | 20.0% |
| !! | TGCTTCATATATTATTGTTT+AGG | + | chr5_1:4786058-4786077 | Msa0712910:intron | 20.0% |
| !! | GCTTCATATATTATTGTTTA+GGG | + | chr5_1:4786059-4786078 | Msa0712910:intron | 20.0% |
| !! | CTTCATATATTATTGTTTAG+GGG | + | chr5_1:4786060-4786079 | Msa0712910:intron | 20.0% |
| !!! | GACATTTTAAAAAATAAGTG+TGG | + | chr5_1:4786268-4786287 | Msa0712910:intron | 20.0% |
| !!! | TTGCATTTGCTTTTAATTTA+TGG | + | chr5_1:4786292-4786311 | Msa0712910:intron | 20.0% |
| !!! | TGCATTTGCTTTTAATTTAT+GGG | + | chr5_1:4786293-4786312 | Msa0712910:intron | 20.0% |
| !! | AAAAATGCTTATAAGTTTAC+CGG | + | chr5_1:4786345-4786364 | Msa0712910:intron | 20.0% |
| !! | TCTATTGTATTAAAAACTCA+CGG | + | chr5_1:4786443-4786462 | Msa0712910:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | chr5_1:4786518-4786537 | None:intergenic | 20.0% |
| !! | TGTATCTAGTAATTTGAAAA+GGG | - | chr5_1:4786553-4786572 | None:intergenic | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+AGG | - | chr5_1:4786554-4786573 | None:intergenic | 20.0% |
| !! | AAGATAGTAGTATTAATTAG+GGG | - | chr5_1:4786600-4786619 | None:intergenic | 20.0% |
| !! | CAAGATAGTAGTATTAATTA+GGG | - | chr5_1:4786601-4786620 | None:intergenic | 20.0% |
| !! | ACAAGATAGTAGTATTAATT+AGG | - | chr5_1:4786602-4786621 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | + | chr5_1:4786643-4786662 | Msa0712910:intron | 20.0% |
| !! | AAGAAATATGAAAAAAGCAA+TGG | + | chr5_1:4786725-4786744 | Msa0712910:intron | 20.0% |
| !! | AGAAATATGAAAAAAGCAAT+GGG | + | chr5_1:4786726-4786745 | Msa0712910:intron | 20.0% |
| !!! | AAATGGATCATTTTATTCAT+TGG | + | chr5_1:4786899-4786918 | Msa0712910:intron | 20.0% |
| !! | ATATAGAGATTATTAACCAA+AGG | - | chr5_1:4787410-4787429 | None:intergenic | 20.0% |
| !! | AATCACAATAGTTTAAATAG+AGG | - | chr5_1:4787616-4787635 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTTACTTTTTCA+AGG | + | chr5_1:4787631-4787650 | Msa0712910:intron | 20.0% |
| !! | AATATGTTGAAAACAACTTA+TGG | + | chr5_1:4788029-4788048 | Msa0712910:intron | 20.0% |
| !! | ATAATTTACAAAATAGAAGC+GGG | + | chr5_1:4788633-4788652 | Msa0712910:intron | 20.0% |
| !!! | TGAATATAGATGCTTTTAAT+GGG | + | chr5_1:4788657-4788676 | Msa0712910:intron | 20.0% |
| !! | AGTTATCTGATTTAAATGAA+AGG | + | chr5_1:4788900-4788919 | Msa0712910:intron | 20.0% |
| !! | AACAAAATATTCATCAATCA+CGG | - | chr5_1:4789238-4789257 | None:intergenic | 20.0% |
| !!! | ATATCATAATATTTTGTCTG+TGG | + | chr5_1:4789328-4789347 | Msa0712910:intron | 20.0% |
| !!! | AAATAAAACTTTTGAAGATC+TGG | + | chr5_1:4789643-4789662 | Msa0712910:CDS | 20.0% |
| !! | ATGCATTCAAAAATATGATA+GGG | + | chr5_1:4789783-4789802 | Msa0712910:three_prime_UTR | 20.0% |
| ! | TGCTAATTAGATTATTGTGT+TGG | + | chr5_1:4785941-4785960 | Msa0712910:intron | 25.0% |
| ! | GCTAATTAGATTATTGTGTT+GGG | + | chr5_1:4785942-4785961 | Msa0712910:intron | 25.0% |
| ! | ATGAAAAAGTTGAGATATAG+AGG | + | chr5_1:4786398-4786417 | Msa0712910:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr5_1:4786519-4786538 | None:intergenic | 25.0% |
| ! | GTATCTAGTAATTTGAAAAG+GGG | - | chr5_1:4786552-4786571 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr5_1:4786590-4786609 | None:intergenic | 25.0% |
| !! | TCTCTTTAGATAAGTGTTTT+TGG | + | chr5_1:4786778-4786797 | Msa0712910:intron | 25.0% |
| ! | GAAATTTGATTGCGATAAAA+TGG | + | chr5_1:4786882-4786901 | Msa0712910:intron | 25.0% |
| !! | ATCTTCATTTTATCCGATTT+TGG | + | chr5_1:4786939-4786958 | Msa0712910:intron | 25.0% |
| ! | TCTCATTGTTTGCATATATA+TGG | + | chr5_1:4786963-4786982 | Msa0712910:intron | 25.0% |
| !! | GTTTTTAAATGTTGGCATTT+TGG | + | chr5_1:4786985-4787004 | Msa0712910:intron | 25.0% |
| ! | CTCATTATTTGTAGGATAAA+TGG | + | chr5_1:4787451-4787470 | Msa0712910:intron | 25.0% |
| ! | TGTTGTTGATATTAATGCTA+TGG | + | chr5_1:4787539-4787558 | Msa0712910:CDS | 25.0% |
| ! | TGATATTAATGCTATGGATA+AGG | + | chr5_1:4787545-4787564 | Msa0712910:CDS | 25.0% |
| !!! | TTGTTTTACTTTTTCAAGGA+TGG | + | chr5_1:4787635-4787654 | Msa0712910:intron | 25.0% |
| ! | GTAAGAAAATCAACAGATAA+AGG | - | chr5_1:4787801-4787820 | None:intergenic | 25.0% |
| ! | ACAATGTGGATATAAATCTT+CGG | + | chr5_1:4788311-4788330 | Msa0712910:CDS | 25.0% |
| !! | TGATCAATTTTTCCAATACT+TGG | + | chr5_1:4788343-4788362 | Msa0712910:intron | 25.0% |
| !! | TGAATTTTGTTCTCAAACAT+CGG | - | chr5_1:4788396-4788415 | None:intergenic | 25.0% |
| !! | CTGAATATAGATGCTTTTAA+TGG | + | chr5_1:4788656-4788675 | Msa0712910:intron | 25.0% |
| ! | TTATATGTAACCTCATGTAT+TGG | + | chr5_1:4788791-4788810 | Msa0712910:intron | 25.0% |
| !! | AATCAGATAACTAGTTCTTA+AGG | - | chr5_1:4788892-4788911 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCTTCAACTGAT+AGG | - | chr5_1:4789004-4789023 | None:intergenic | 25.0% |
| !!! | TAATTTTTTGATCCAAGCAT+AGG | - | chr5_1:4789104-4789123 | None:intergenic | 25.0% |
| ! | GATGCATTCAAAAATATGAT+AGG | + | chr5_1:4789782-4789801 | Msa0712910:three_prime_UTR | 25.0% |
| !!! | TGAATTGGGTTTTGGTTTTT+TGG | - | chr5_1:4785268-4785287 | None:intergenic | 30.0% |
| ! | TTCTTCTTTGAATTGGGTTT+TGG | - | chr5_1:4785276-4785295 | None:intergenic | 30.0% |
| TTTATCAGGAACAAGATTCT+CGG | - | chr5_1:4785319-4785338 | None:intergenic | 30.0% | |
| AGAATCTTGTTCCTGATAAA+TGG | + | chr5_1:4785319-4785338 | Msa0712910:CDS | 30.0% | |
| ! | TGAACTTGTTTCCATTTATC+AGG | - | chr5_1:4785333-4785352 | None:intergenic | 30.0% |
| AAGTTATGAAGCTGAAAAGA+AGG | + | chr5_1:4785451-4785470 | Msa0712910:CDS | 30.0% | |
| TTCTCAGCAAAACAAAAACT+CGG | - | chr5_1:4785570-4785589 | None:intergenic | 30.0% | |
| !! | TTGTTTTGCTGAGAAAAAGA+AGG | + | chr5_1:4785575-4785594 | Msa0712910:CDS | 30.0% |
| AAGAAGGAAAAAGAAGTAGA+TGG | + | chr5_1:4785591-4785610 | Msa0712910:CDS | 30.0% | |
| AGAAGGAAAAAGAAGTAGAT+GGG | + | chr5_1:4785592-4785611 | Msa0712910:CDS | 30.0% | |
| GAGACTAGAAGTTATTACAT+AGG | - | chr5_1:4785806-4785825 | None:intergenic | 30.0% | |
| AGCGATACAGATAAATATAC+CGG | - | chr5_1:4786039-4786058 | None:intergenic | 30.0% | |
| ! | TTCTGCTTGTTAGATAACTT+TGG | + | chr5_1:4786192-4786211 | Msa0712910:intron | 30.0% |
| AAAATGTCAATACATCACCA+AGG | - | chr5_1:4786256-4786275 | None:intergenic | 30.0% | |
| !! | TTTAACTTTTCAATAAGCGC+CGG | - | chr5_1:4786367-4786386 | None:intergenic | 30.0% |
| TGAAAAGGGGTTTACATTTA+GGG | - | chr5_1:4786539-4786558 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | - | chr5_1:4786540-4786559 | None:intergenic | 30.0% | |
| !!! | TTAGATAAGTGTTTTTGGAG+AGG | + | chr5_1:4786783-4786802 | Msa0712910:intron | 30.0% |
| ! | TGGATCATTTTATTCATTGG+CGG | + | chr5_1:4786902-4786921 | Msa0712910:intron | 30.0% |
| CAAACAATGAGAACCAAAAT+CGG | - | chr5_1:4786955-4786974 | None:intergenic | 30.0% | |
| !!! | TCTTCCTTTTTTGTTTACCT+GGG | + | chr5_1:4787038-4787057 | Msa0712910:CDS | 30.0% |
| TTACTTCAACATCAAAACGA+AGG | - | chr5_1:4787212-4787231 | None:intergenic | 30.0% | |
| CTAAGATTACTCAACATCAA+CGG | - | chr5_1:4787247-4787266 | None:intergenic | 30.0% | |
| !!! | AGTTGCATTTTTTTCAACGT+TGG | + | chr5_1:4787338-4787357 | Msa0712910:intron | 30.0% |
| ACACAGAAGATTATAATGTG+TGG | + | chr5_1:4787587-4787606 | Msa0712910:intron | 30.0% | |
| GCTCTTTACAAAGCAATAAT+TGG | + | chr5_1:4787665-4787684 | Msa0712910:CDS | 30.0% | |
| CGTTGTTATCATTACATCTT+AGG | + | chr5_1:4787874-4787893 | Msa0712910:intron | 30.0% | |
| ! | ACTGTTTTCATTAGCTATTC+TGG | + | chr5_1:4787995-4788014 | Msa0712910:intron | 30.0% |
| ! | CTGTTTTCATTAGCTATTCT+GGG | + | chr5_1:4787996-4788015 | Msa0712910:intron | 30.0% |
| ! | TAATAGATTAAGGGCATGTT+TGG | - | chr5_1:4788138-4788157 | None:intergenic | 30.0% |
| TTATATCCTTAGTTAGCTGT+CGG | + | chr5_1:4788169-4788188 | Msa0712910:intron | 30.0% | |
| TAAACAACAAAGCAAATGCA+TGG | - | chr5_1:4788207-4788226 | None:intergenic | 30.0% | |
| CAATGTGGATATAAATCTTC+GGG | + | chr5_1:4788312-4788331 | Msa0712910:CDS | 30.0% | |
| ! | ATCTACCTCTTATTCTTTTG+TGG | + | chr5_1:4788369-4788388 | Msa0712910:intron | 30.0% |
| AAATTCATTTGCTCTGTCTT+AGG | + | chr5_1:4788409-4788428 | Msa0712910:intron | 30.0% | |
| TGATCGGACATTAAAAAACA+AGG | + | chr5_1:4788508-4788527 | Msa0712910:CDS | 30.0% | |
| ! | AGATAACTAGTTCTTAAGGA+CGG | - | chr5_1:4788888-4788907 | None:intergenic | 30.0% |
| TTTAATGACTCTGACAACTT+TGG | - | chr5_1:4788979-4788998 | None:intergenic | 30.0% | |
| !! | TACTAGAGTATTGTTCAACT+CGG | + | chr5_1:4789287-4789306 | Msa0712910:intron | 30.0% |
| ! | CAATTTATCTTGTTTGTCTC+AGG | + | chr5_1:4789451-4789470 | Msa0712910:intron | 30.0% |
| ! | TTTTTCTTATCCACTTCTGT+CGG | - | chr5_1:4789625-4789644 | None:intergenic | 30.0% |
| !! | CATATGGAAACTTTAGCTTT+AGG | + | chr5_1:4789732-4789751 | Msa0712910:three_prime_UTR | 30.0% |
| GAAGAAGAAGAAGAAGAGAA+GGG | - | chr5_1:4785033-4785052 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAGA+AGG | - | chr5_1:4785034-4785053 | None:intergenic | 35.0% | |
| TTGAAAAGATTGAAACACGC+GGG | - | chr5_1:4785076-4785095 | None:intergenic | 35.0% | |
| GTTGAAAAGATTGAAACACG+CGG | - | chr5_1:4785077-4785096 | None:intergenic | 35.0% | |
| ! | ATGAAGAGAGAATTTTGTGG+AGG | - | chr5_1:4785125-4785144 | None:intergenic | 35.0% |
| ! | GTGATGAAGAGAGAATTTTG+TGG | - | chr5_1:4785128-4785147 | None:intergenic | 35.0% |
| !!! | GATTGTCTTGTTTTCGAAGA+AGG | + | chr5_1:4785192-4785211 | Msa0712910:CDS | 35.0% |
| TCAATCTCTTGAGCTTTCTT+AGG | - | chr5_1:4785420-4785439 | None:intergenic | 35.0% | |
| TATGAAGCTGAAAAGAAGGT+TGG | + | chr5_1:4785455-4785474 | Msa0712910:CDS | 35.0% | |
| TTCAAATCCATATCCCTCAA+AGG | - | chr5_1:4785483-4785502 | None:intergenic | 35.0% | |
| TTTGTTAATGTACGTTGTCG+AGG | + | chr5_1:4785770-4785789 | Msa0712910:intron | 35.0% | |
| TACGTTTGGTATCTATGTGT+CGG | + | chr5_1:4785888-4785907 | Msa0712910:intron | 35.0% | |
| CATACACATGTAGTTACCTT+TGG | + | chr5_1:4785991-4786010 | Msa0712910:intron | 35.0% | |
| TTGTGTCTGACACAAATACT+TGG | - | chr5_1:4786090-4786109 | None:intergenic | 35.0% | |
| CTATGTGTCAATGTCATATC+CGG | + | chr5_1:4786133-4786152 | Msa0712910:intron | 35.0% | |
| GTAGTGAAAATCAACTTCCT+TGG | + | chr5_1:4786236-4786255 | Msa0712910:intron | 35.0% | |
| CAAATGGGTGCTTAGATATA+GGG | - | chr5_1:4786503-4786522 | None:intergenic | 35.0% | |
| TCAAATGGGTGCTTAGATAT+AGG | - | chr5_1:4786504-4786523 | None:intergenic | 35.0% | |
| TTGGAGAGGTTTATCCAAAA+TGG | + | chr5_1:4786797-4786816 | Msa0712910:intron | 35.0% | |
| ATCCAAAATGGCTCTTAAGT+TGG | + | chr5_1:4786809-4786828 | Msa0712910:intron | 35.0% | |
| TCACAACCTATGGTACTTAA+TGG | + | chr5_1:4786839-4786858 | Msa0712910:intron | 35.0% | |
| CATCATCCATTAAGTACCAT+AGG | - | chr5_1:4786848-4786867 | None:intergenic | 35.0% | |
| ! | CTATGGTACTTAATGGATGA+TGG | + | chr5_1:4786846-4786865 | Msa0712910:intron | 35.0% |
| TCTTTCATACTTGCCTGAAT+AGG | + | chr5_1:4787015-4787034 | Msa0712910:intron | 35.0% | |
| CAAAAAAGGAAGACCTATTC+AGG | - | chr5_1:4787031-4787050 | None:intergenic | 35.0% | |
| !!! | GTCTTCCTTTTTTGTTTACC+TGG | + | chr5_1:4787037-4787056 | Msa0712910:CDS | 35.0% |
| TCTTCCCAGGTAAACAAAAA+AGG | - | chr5_1:4787045-4787064 | None:intergenic | 35.0% | |
| TGAGTAATCTTAGTAGCTGT+TGG | + | chr5_1:4787254-4787273 | Msa0712910:intron | 35.0% | |
| TGAGTAATCTTAGTAGCTGT+TGG | + | chr5_1:4787254-4787273 | Msa0712910:intron | 35.0% | |
| ! | TGGAATCATGATAGAAGTGT+AGG | + | chr5_1:4787358-4787377 | Msa0712910:intron | 35.0% |
| ! | AATCATGATAGAAGTGTAGG+AGG | + | chr5_1:4787361-4787380 | Msa0712910:intron | 35.0% |
| ! | ATTCACTTGTTTGTTGCCTT+TGG | + | chr5_1:4787391-4787410 | Msa0712910:intron | 35.0% |
| GGCTAACACTCATTATTTGT+AGG | + | chr5_1:4787443-4787462 | Msa0712910:intron | 35.0% | |
| ! | GCTGCAACAAAGTATCTAAA+AGG | - | chr5_1:4787515-4787534 | None:intergenic | 35.0% |
| CTCACATTATCTTGCACAAA+CGG | - | chr5_1:4787737-4787756 | None:intergenic | 35.0% | |
| AGACTATTCAGAAGAGCTTA+TGG | - | chr5_1:4788074-4788093 | None:intergenic | 35.0% | |
| AAGCAAATGCATGGAATATC+AGG | - | chr5_1:4788198-4788217 | None:intergenic | 35.0% | |
| !! | TTGCTTTGTTGTTTATGTGC+TGG | + | chr5_1:4788212-4788231 | Msa0712910:intron | 35.0% |
| !! | ACAAGAGTGCTTTAATTGCT+CGG | - | chr5_1:4788288-4788307 | None:intergenic | 35.0% |
| !!! | AGCACTCTTGTTTTACAATG+TGG | + | chr5_1:4788297-4788316 | Msa0712910:CDS | 35.0% |
| !! | AGATGCTTTTAATGGGTCAT+TGG | + | chr5_1:4788664-4788683 | Msa0712910:intron | 35.0% |
| GGTAAAATATCAGTTGTCAC+TGG | + | chr5_1:4788685-4788704 | Msa0712910:intron | 35.0% | |
| ! | ATGCATTCAATCTGAAGTGT+TGG | + | chr5_1:4788834-4788853 | Msa0712910:intron | 35.0% |
| ! | GATAACTAGTTCTTAAGGAC+GGG | - | chr5_1:4788887-4788906 | None:intergenic | 35.0% |
| TCAACAAAGAAGCAAGTGAT+TGG | - | chr5_1:4789057-4789076 | None:intergenic | 35.0% | |
| GTTGTCTAGCAGATTAATAC+TGG | + | chr5_1:4789400-4789419 | Msa0712910:intron | 35.0% | |
| ! | TTATCTTGTTTGTCTCAGGA+TGG | + | chr5_1:4789455-4789474 | Msa0712910:intron | 35.0% |
| !! | TGACATTTTGACCAGAGTAA+AGG | - | chr5_1:4789502-4789521 | None:intergenic | 35.0% |
| AACTTGATTAACTCGTCTCT+CGG | - | chr5_1:4789576-4789595 | None:intergenic | 35.0% | |
| ! | TTTTCTTATCCACTTCTGTC+GGG | - | chr5_1:4789624-4789643 | None:intergenic | 35.0% |
| !! | GAAACTTTAGCTTTAGGACA+AGG | + | chr5_1:4789738-4789757 | Msa0712910:three_prime_UTR | 35.0% |
| TTGAGGATTATGAACAAGGG+TGG | - | chr5_1:4784989-4785008 | None:intergenic | 40.0% | |
| GGGTTGAGGATTATGAACAA+GGG | - | chr5_1:4784992-4785011 | None:intergenic | 40.0% | |
| TGAAAAGATTGAAACACGCG+GGG | - | chr5_1:4785075-4785094 | None:intergenic | 40.0% | |
| ! | AGAGAATTTTGTGGAGGTTG+CGG | - | chr5_1:4785119-4785138 | None:intergenic | 40.0% |
| AACGACGAAGAACACATCAT+CGG | + | chr5_1:4785168-4785187 | Msa0712910:CDS | 40.0% | |
| TTGTCGGATGTTGGAAAAAC+GGG | - | chr5_1:4785231-4785250 | None:intergenic | 40.0% | |
| GTTGTCGGATGTTGGAAAAA+CGG | - | chr5_1:4785232-4785251 | None:intergenic | 40.0% | |
| !!! | TTGGTTTTTTGGTGTCTACG+AGG | - | chr5_1:4785257-4785276 | None:intergenic | 40.0% |
| ! | AAAGAAGGTTGGTTCCTTTG+AGG | + | chr5_1:4785466-4785485 | Msa0712910:CDS | 40.0% |
| ! | AAGAAGGTTGGTTCCTTTGA+GGG | + | chr5_1:4785467-4785486 | Msa0712910:CDS | 40.0% |
| GGAACCTTATCAAGAACCAA+AGG | - | chr5_1:4785549-4785568 | None:intergenic | 40.0% | |
| ! | CTCCAATTTTCTTAGCAGCA+GGG | - | chr5_1:4785716-4785735 | None:intergenic | 40.0% |
| CAAACACACGTAGTTACGTT+TGG | + | chr5_1:4785874-4785893 | Msa0712910:intron | 40.0% | |
| TGTCTGACACCAATATGTGT+CGG | - | chr5_1:4785971-4785990 | None:intergenic | 40.0% | |
| CACTGACATGTAGATACCAA+AGG | - | chr5_1:4786010-4786029 | None:intergenic | 40.0% | |
| CTACATGTCAGTGTCATATC+CGG | + | chr5_1:4786017-4786036 | Msa0712910:intron | 40.0% | |
| !! | CAAGCACATGTGGTTACTTT+TGG | + | chr5_1:4786107-4786126 | Msa0712910:intron | 40.0% |
| AGCAACACAGATGCATATAC+CGG | - | chr5_1:4786155-4786174 | None:intergenic | 40.0% | |
| ! | CACCAACTTAAGAGCCATTT+TGG | - | chr5_1:4786814-4786833 | None:intergenic | 40.0% |
| !! | TTTTGTTTACCTGGGAAGAG+AGG | + | chr5_1:4787046-4787065 | Msa0712910:CDS | 40.0% |
| TTTGTTTACCTGGGAAGAGA+GGG | + | chr5_1:4787047-4787066 | Msa0712910:CDS | 40.0% | |
| TCAGTCATTGCTCATAGACA+TGG | - | chr5_1:4787126-4787145 | None:intergenic | 40.0% | |
| AGATTACTCAACATCAACGG+TGG | - | chr5_1:4787244-4787263 | None:intergenic | 40.0% | |
| ! | TGATAGAAGTGTAGGAGGAA+AGG | + | chr5_1:4787366-4787385 | Msa0712910:intron | 40.0% |
| ! | GATAGAAGTGTAGGAGGAAA+GGG | + | chr5_1:4787367-4787386 | Msa0712910:intron | 40.0% |
| AGAGTTTCTCACGAGAAGAT+GGG | - | chr5_1:4787708-4787727 | None:intergenic | 40.0% | |
| CAACGATGAATTTCCAGTGA+GGG | - | chr5_1:4787859-4787878 | None:intergenic | 40.0% | |
| ACAACGATGAATTTCCAGTG+AGG | - | chr5_1:4787860-4787879 | None:intergenic | 40.0% | |
| GTTGTTTATGTGCTGGAAAC+AGG | + | chr5_1:4788219-4788238 | Msa0712910:intron | 40.0% | |
| TTTATGTGCTGGAAACAGGA+TGG | + | chr5_1:4788223-4788242 | Msa0712910:intron | 40.0% | |
| TTATGTGCTGGAAACAGGAT+GGG | + | chr5_1:4788224-4788243 | Msa0712910:intron | 40.0% | |
| TTGTACAGCATAGTGCATCA+AGG | - | chr5_1:4788254-4788273 | None:intergenic | 40.0% | |
| !! | CAAGAGTGCTTTAATTGCTC+GGG | - | chr5_1:4788287-4788306 | None:intergenic | 40.0% |
| GAGGTAGATAAGCCAAGTAT+TGG | - | chr5_1:4788358-4788377 | None:intergenic | 40.0% | |
| TCGGTCCACAAAAGAATAAG+AGG | - | chr5_1:4788377-4788396 | None:intergenic | 40.0% | |
| TCATTTGCTCTGTCTTAGGA+TGG | + | chr5_1:4788413-4788432 | Msa0712910:intron | 40.0% | |
| GTCTGAACAGCAAGATGTAA+TGG | - | chr5_1:4788446-4788465 | None:intergenic | 40.0% | |
| !! | TGCTGATTAAAGGTGCTGAT+CGG | + | chr5_1:4788492-4788511 | Msa0712910:CDS | 40.0% |
| ACAAACATTCATCATGACCC+TGG | + | chr5_1:4788594-4788613 | Msa0712910:intron | 40.0% | |
| ! | TTATCGATGTCAAAGTGCCA+GGG | - | chr5_1:4788614-4788633 | None:intergenic | 40.0% |
| ! | ATTATCGATGTCAAAGTGCC+AGG | - | chr5_1:4788615-4788634 | None:intergenic | 40.0% |
| CAACATGACACCAATACATG+AGG | - | chr5_1:4788804-4788823 | None:intergenic | 40.0% | |
| !! | CTCATGTATTGGTGTCATGT+TGG | + | chr5_1:4788802-4788821 | Msa0712910:intron | 40.0% |
| TCGAGATTCTCCCTTTAAAC+AGG | + | chr5_1:4788944-4788963 | Msa0712910:intron | 40.0% | |
| CGAGATTCTCCCTTTAAACA+GGG | + | chr5_1:4788945-4788964 | Msa0712910:intron | 40.0% | |
| GAAAGACGTCCCTGTTTAAA+GGG | - | chr5_1:4788957-4788976 | None:intergenic | 40.0% | |
| TTTGACCAGAGTAAAGGCAA+AGG | - | chr5_1:4789496-4789515 | None:intergenic | 40.0% | |
| ACTTGATTAACTCGTCTCTC+GGG | - | chr5_1:4789575-4789594 | None:intergenic | 40.0% | |
| TTTGAAGATCTGGACCAACA+AGG | + | chr5_1:4789653-4789672 | Msa0712910:CDS | 40.0% | |
| GCTATTCTTCACTTCCTTGT+TGG | - | chr5_1:4789670-4789689 | None:intergenic | 40.0% | |
| ! | AGCCATTGCTGAGTTTTTCA+TGG | + | chr5_1:4789687-4789706 | Msa0712910:exon | 40.0% |
| TGCCATGAAAAACTCAGCAA+TGG | - | chr5_1:4789692-4789711 | None:intergenic | 40.0% | |
| ! | ATTGCTGAGTTTTTCATGGC+AGG | + | chr5_1:4789691-4789710 | Msa0712910:three_prime_UTR | 40.0% |
| GGGGTTGAGGATTATGAACA+AGG | - | chr5_1:4784993-4785012 | None:intergenic | 45.0% | |
| !! | AAGAAGAGTGTTTGGGGTTG+AGG | - | chr5_1:4785006-4785025 | None:intergenic | 45.0% |
| !! | GGAGAGAAGAAGAGTGTTTG+GGG | - | chr5_1:4785012-4785031 | None:intergenic | 45.0% |
| !! | GGGAGAGAAGAAGAGTGTTT+GGG | - | chr5_1:4785013-4785032 | None:intergenic | 45.0% |
| !! | AGGGAGAGAAGAAGAGTGTT+TGG | - | chr5_1:4785014-4785033 | None:intergenic | 45.0% |
| CGTTGTCGTTGTTGTCATGT+TGG | - | chr5_1:4785152-4785171 | None:intergenic | 45.0% | |
| TGTCGGATGTTGGAAAAACG+GGG | - | chr5_1:4785230-4785249 | None:intergenic | 45.0% | |
| ! | GTTGGTTCCTTTGAGGGATA+TGG | + | chr5_1:4785473-4785492 | Msa0712910:CDS | 45.0% |
| !! | GACGCCTTTGGTTCTTGATA+AGG | + | chr5_1:4785542-4785561 | Msa0712910:CDS | 45.0% |
| !! | TAGATGGGTTGAGTGAAGAG+AGG | + | chr5_1:4785607-4785626 | Msa0712910:CDS | 45.0% |
| !! | AGATGGGTTGAGTGAAGAGA+GGG | + | chr5_1:4785608-4785627 | Msa0712910:CDS | 45.0% |
| TAGAAGCTAGGAATCCTAGG+TGG | + | chr5_1:4785631-4785650 | Msa0712910:CDS | 45.0% | |
| AGAAGCTAGGAATCCTAGGT+GGG | + | chr5_1:4785632-4785651 | Msa0712910:CDS | 45.0% | |
| !! | AATCCTAGGTGGGCTGTTTA+TGG | + | chr5_1:4785642-4785661 | Msa0712910:CDS | 45.0% |
| !! | ATCCTAGGTGGGCTGTTTAT+GGG | + | chr5_1:4785643-4785662 | Msa0712910:CDS | 45.0% |
| TGTTTATGGGAAAGGGTTGG+AGG | + | chr5_1:4785656-4785675 | Msa0712910:CDS | 45.0% | |
| GAAAGGGTTGGAGGATGTTA+AGG | + | chr5_1:4785665-4785684 | Msa0712910:CDS | 45.0% | |
| GACCCTGCTGCTAAGAAAAT+TGG | + | chr5_1:4785711-4785730 | Msa0712910:CDS | 45.0% | |
| ! | CCTCCAATTTTCTTAGCAGC+AGG | - | chr5_1:4785717-4785736 | None:intergenic | 45.0% |
| CCTGCTGCTAAGAAAATTGG+AGG | + | chr5_1:4785714-4785733 | Msa0712910:CDS | 45.0% | |
| ! | CTCTAGATTGAAAGCGTGTC+AGG | + | chr5_1:4785823-4785842 | Msa0712910:intron | 45.0% |
| GTCTAACATCATCACGTGTC+AGG | - | chr5_1:4785853-4785872 | None:intergenic | 45.0% | |
| AGCAACACAGACACATGCAT+CGG | - | chr5_1:4785922-4785941 | None:intergenic | 45.0% | |
| GTCTGACACAAATACTTGGC+AGG | - | chr5_1:4786086-4786105 | None:intergenic | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | - | chr5_1:4786495-4786514 | None:intergenic | 45.0% | |
| TGGGTGCTTAGATATAGGGA+CGG | - | chr5_1:4786499-4786518 | None:intergenic | 45.0% | |
| AGCAATGGGTGCCTACATTA+AGG | + | chr5_1:4786740-4786759 | Msa0712910:intron | 45.0% | |
| GCAATGGGTGCCTACATTAA+GGG | + | chr5_1:4786741-4786760 | Msa0712910:intron | 45.0% | |
| ATTCATTGGCGGTTGAGTTC+AGG | + | chr5_1:4786913-4786932 | Msa0712910:intron | 45.0% | |
| GAAGTAGCAACTGTCAAGTC+TGG | - | chr5_1:4787093-4787112 | None:intergenic | 45.0% | |
| !! | TCTCACGAGAAGATGGGTTA+TGG | - | chr5_1:4787702-4787721 | None:intergenic | 45.0% |
| CAGAGTTTCTCACGAGAAGA+TGG | - | chr5_1:4787709-4787728 | None:intergenic | 45.0% | |
| GATGAATTTCCAGTGAGGGA+AGG | - | chr5_1:4787855-4787874 | None:intergenic | 45.0% | |
| AGGATACCGACAGCTAACTA+AGG | - | chr5_1:4788178-4788197 | None:intergenic | 45.0% | |
| TATGTGCTGGAAACAGGATG+GGG | + | chr5_1:4788225-4788244 | Msa0712910:intron | 45.0% | |
| TACAGCATAGTGCATCAAGG+TGG | - | chr5_1:4788251-4788270 | None:intergenic | 45.0% | |
| GACTCAGAGACCTGATATAG+TGG | + | chr5_1:4788463-4788482 | Msa0712910:CDS | 45.0% | |
| AGCAGAAGCTCCACTATATC+AGG | - | chr5_1:4788476-4788495 | None:intergenic | 45.0% | |
| ! | GTGGAGCTTCTGCTGATTAA+AGG | + | chr5_1:4788482-4788501 | Msa0712910:CDS | 45.0% |
| GGAAAGACGTCCCTGTTTAA+AGG | - | chr5_1:4788958-4788977 | None:intergenic | 45.0% | |
| CTAGTCAGTAGTCCTATGCT+TGG | + | chr5_1:4789089-4789108 | Msa0712910:intron | 45.0% | |
| GTTGGCTAATCGACGCATAA+CGG | - | chr5_1:4789159-4789178 | None:intergenic | 45.0% | |
| !!! | ACATTTTTATTTTAAAAAAA+TGG | - | chr5_1:4789854-4789873 | None:intergenic | 5.0% |
| TTGTGGAGGTTGCGGTTTGT+GGG | - | chr5_1:4785111-4785130 | None:intergenic | 50.0% | |
| TTTGTGGAGGTTGCGGTTTG+TGG | - | chr5_1:4785112-4785131 | None:intergenic | 50.0% | |
| ACGAGGTTGTTGTCGGATGT+TGG | - | chr5_1:4785240-4785259 | None:intergenic | 50.0% | |
| GGTGTCTACGAGGTTGTTGT+CGG | - | chr5_1:4785247-4785266 | None:intergenic | 50.0% | |
| GTGAAGAGAGGGTAGAAGCT+AGG | + | chr5_1:4785619-4785638 | Msa0712910:CDS | 50.0% | |
| GGGTAGAAGCTAGGAATCCT+AGG | + | chr5_1:4785628-4785647 | Msa0712910:CDS | 50.0% | |
| TTCCCATAAACAGCCCACCT+AGG | - | chr5_1:4785648-4785667 | None:intergenic | 50.0% | |
| !! | AGGTGGGCTGTTTATGGGAA+AGG | + | chr5_1:4785648-4785667 | Msa0712910:CDS | 50.0% |
| !! | GGTGGGCTGTTTATGGGAAA+GGG | + | chr5_1:4785649-4785668 | Msa0712910:CDS | 50.0% |
| GGCTGTTTATGGGAAAGGGT+TGG | + | chr5_1:4785653-4785672 | Msa0712910:CDS | 50.0% | |
| GTTGGGTGTCCGACACATAT+TGG | + | chr5_1:4785959-4785978 | Msa0712910:intron | 50.0% | |
| GTGTCAGACACAAGCACATG+TGG | + | chr5_1:4786097-4786116 | Msa0712910:intron | 50.0% | |
| GTGCTTAGATATAGGGACGG+AGG | - | chr5_1:4786496-4786515 | None:intergenic | 50.0% | |
| TGGGTGCCTACATTAAGGGA+CGG | + | chr5_1:4786745-4786764 | Msa0712910:intron | 50.0% | |
| TGCCTACATTAAGGGACGGA+GGG | + | chr5_1:4786749-4786768 | Msa0712910:intron | 50.0% | |
| !! | TGGTGCTGCTTCACAACCTA+TGG | + | chr5_1:4786829-4786848 | Msa0712910:intron | 50.0% |
| CAACAAATCCCTCTCTTCCC+AGG | - | chr5_1:4787058-4787077 | None:intergenic | 50.0% | |
| ! | CTCGCAGCAAAAGTGTGCAA+AGG | - | chr5_1:4787480-4787499 | None:intergenic | 50.0% |
| ! | TTGCACACTTTTGCTGCGAG+CGG | + | chr5_1:4787480-4787499 | Msa0712910:CDS | 50.0% |
| TTGCTCTGTCTTAGGATGGC+TGG | + | chr5_1:4788417-4788436 | Msa0712910:intron | 50.0% | |
| TGTCAGTGTCAGTGCTTCGT+AGG | - | chr5_1:4788717-4788736 | None:intergenic | 50.0% | |
| TGCTAGGTGAGGACTGATGT+TGG | - | chr5_1:4789177-4789196 | None:intergenic | 50.0% | |
| ! | CTTGTCACTTCTGCTAGGTG+AGG | - | chr5_1:4789188-4789207 | None:intergenic | 50.0% |
| CTCACCTAGCAGAAGTGACA+AGG | + | chr5_1:4789186-4789205 | Msa0712910:intron | 50.0% | |
| ! | CAAGCCTTGTCACTTCTGCT+AGG | - | chr5_1:4789193-4789212 | None:intergenic | 50.0% |
| GAGTAAAGGCAAAGGTCGAG+TGG | - | chr5_1:4789488-4789507 | None:intergenic | 50.0% | |
| CTCGACCTTTGCCTTTACTC+TGG | + | chr5_1:4789488-4789507 | Msa0712910:CDS | 50.0% | |
| GCAAGCAGCTCTTCAGCATA+TGG | + | chr5_1:4789716-4789735 | Msa0712910:three_prime_UTR | 50.0% | |
| AGATTGAAACACGCGGGGTG+TGG | - | chr5_1:4785070-4785089 | None:intergenic | 55.0% | |
| TGTGGAGGTTGCGGTTTGTG+GGG | - | chr5_1:4785110-4785129 | None:intergenic | 55.0% | |
| ! | ATTGGCTCAGCTGACGCCTT+TGG | + | chr5_1:4785530-4785549 | Msa0712910:CDS | 55.0% |
| GTGCCTACATTAAGGGACGG+AGG | + | chr5_1:4786748-4786767 | Msa0712910:intron | 55.0% | |
| CTCCCTCCGTCCCTTAATGT+AGG | - | chr5_1:4786754-4786773 | None:intergenic | 55.0% | |
| TGTGCTCTTCCTTCCCTCAC+TGG | + | chr5_1:4787843-4787862 | Msa0712910:intron | 55.0% | |
| CTCTCGGGCGCGTCTATATA+AGG | - | chr5_1:4789560-4789579 | None:intergenic | 55.0% | |
| CTGTCGGGCGCGTCTATATA+AGG | - | chr5_1:4789609-4789628 | None:intergenic | 55.0% | |
| CGGTTTGTGGGGGGTTTGAG+AGG | - | chr5_1:4785099-4785118 | None:intergenic | 60.0% | |
| TGGAGGTTGCGGTTTGTGGG+GGG | - | chr5_1:4785108-4785127 | None:intergenic | 60.0% | |
| GTGGAGGTTGCGGTTTGTGG+GGG | - | chr5_1:4785109-4785128 | None:intergenic | 60.0% | |
| ATAGACGCGCCCGACAGAAG+TGG | + | chr5_1:4789612-4789631 | Msa0712910:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 4784921 | 4789894 | 4784921 | ID=Msa0712910;Name=Msa0712910 |
| chr5_1 | mRNA | 4784921 | 4789894 | 4784921 | ID=Msa0712910-mRNA-1;Parent=Msa0712910;Name=Msa0712910-mRNA-1;_AED=0.12;_eAED=0.12;_QI=25|1|1|1|1|1|7|206|493 |
| chr5_1 | exon | 4784921 | 4785735 | 4784921 | ID=Msa0712910-mRNA-1:exon:2017;Parent=Msa0712910-mRNA-1 |
| chr5_1 | exon | 4787037 | 4787113 | 4787037 | ID=Msa0712910-mRNA-1:exon:2018;Parent=Msa0712910-mRNA-1 |
| chr5_1 | exon | 4787465 | 4787566 | 4787465 | ID=Msa0712910-mRNA-1:exon:2019;Parent=Msa0712910-mRNA-1 |
| chr5_1 | exon | 4787653 | 4787751 | 4787653 | ID=Msa0712910-mRNA-1:exon:2020;Parent=Msa0712910-mRNA-1 |
| chr5_1 | exon | 4788241 | 4788339 | 4788241 | ID=Msa0712910-mRNA-1:exon:2021;Parent=Msa0712910-mRNA-1 |
| chr5_1 | exon | 4788431 | 4788529 | 4788431 | ID=Msa0712910-mRNA-1:exon:2022;Parent=Msa0712910-mRNA-1 |
| chr5_1 | exon | 4789473 | 4789894 | 4789473 | ID=Msa0712910-mRNA-1:exon:2023;Parent=Msa0712910-mRNA-1 |
| chr5_1 | five_prime_UTR | 4784921 | 4784945 | 4784921 | ID=Msa0712910-mRNA-1:five_prime_utr;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4784946 | 4785735 | 4784946 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4787037 | 4787113 | 4787037 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4787465 | 4787566 | 4787465 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4787653 | 4787751 | 4787653 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4788241 | 4788339 | 4788241 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4788431 | 4788529 | 4788431 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | CDS | 4789473 | 4789688 | 4789473 | ID=Msa0712910-mRNA-1:cds;Parent=Msa0712910-mRNA-1 |
| chr5_1 | three_prime_UTR | 4789689 | 4789894 | 4789689 | ID=Msa0712910-mRNA-1:three_prime_utr;Parent=Msa0712910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
