Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073526.t1 | XP_024636682.1 | 96.1 | 310 | 12 | 0 | 1 | 310 | 1 | 310 | 3.10E-158 | 567.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073526.t1 | O80942 | 30.6 | 294 | 184 | 6 | 28 | 306 | 10 | 298 | 2.8e-22 | 107.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073526.t1 | A0A396I621 | 96.1 | 310 | 12 | 0 | 1 | 310 | 1 | 310 | 2.3e-158 | 567.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene073526 | -0.806356 | 8.56E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene073526 | 0.845228 | 4.63E-59 | -1.69E-46 |
| MS.gene049549 | MS.gene073526 | 0.889462 | 2.37E-73 | -1.69E-46 |
| MS.gene049609 | MS.gene073526 | -0.80362 | 3.20E-49 | -1.69E-46 |
| MS.gene049634 | MS.gene073526 | 0.801321 | 9.51E-49 | -1.69E-46 |
| MS.gene050095 | MS.gene073526 | 0.801175 | 1.02E-48 | -1.69E-46 |
| MS.gene050096 | MS.gene073526 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene050329 | MS.gene073526 | 0.801398 | 9.18E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene073526 | -0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene050647 | MS.gene073526 | 0.814823 | 1.27E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene073526 | -0.80738 | 5.20E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene073526 | 0.801424 | 9.07E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene073526 | 0.802697 | 4.96E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene073526 | 0.857118 | 2.03E-62 | -1.69E-46 |
| MS.gene051138 | MS.gene073526 | 0.807879 | 4.07E-50 | -1.69E-46 |
| MS.gene051158 | MS.gene073526 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene073526 | 0.814671 | 1.37E-51 | -1.69E-46 |
| MS.gene051844 | MS.gene073526 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene051996 | MS.gene073526 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene073526 | 0.888528 | 5.45E-73 | -1.69E-46 |
| MS.gene052212 | MS.gene073526 | 0.843459 | 1.38E-58 | -1.69E-46 |
| MS.gene05240 | MS.gene073526 | 0.867487 | 1.32E-65 | -1.69E-46 |
| MS.gene05244 | MS.gene073526 | 0.843392 | 1.44E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene073526 | -0.810441 | 1.15E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene073526 | -0.807624 | 4.61E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene073526 | -0.80531 | 1.42E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene073526 | 0.847869 | 8.80E-60 | -1.69E-46 |
| MS.gene052705 | MS.gene073526 | 0.808147 | 3.57E-50 | -1.69E-46 |
| MS.gene052706 | MS.gene073526 | 0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene073526 | -0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene073526 | -0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene053403 | MS.gene073526 | 0.832281 | 1.03E-55 | -1.69E-46 |
| MS.gene053406 | MS.gene073526 | 0.858484 | 7.98E-63 | -1.69E-46 |
| MS.gene053420 | MS.gene073526 | 0.835779 | 1.38E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene073526 | -0.801145 | 1.03E-48 | -1.69E-46 |
| MS.gene053488 | MS.gene073526 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene073526 | -0.807282 | 5.45E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene073526 | 0.823103 | 1.66E-53 | -1.69E-46 |
| MS.gene054146 | MS.gene073526 | 0.915223 | 7.60E-85 | -1.69E-46 |
| MS.gene054147 | MS.gene073526 | 0.823828 | 1.12E-53 | -1.69E-46 |
| MS.gene054181 | MS.gene073526 | 0.829924 | 3.92E-55 | -1.69E-46 |
| MS.gene054277 | MS.gene073526 | 0.84513 | 4.92E-59 | -1.69E-46 |
| MS.gene054421 | MS.gene073526 | 0.834354 | 3.15E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene073526 | 0.809291 | 2.03E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene073526 | 0.872024 | 4.37E-67 | -1.69E-46 |
| MS.gene055124 | MS.gene073526 | 0.814157 | 1.78E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene073526 | 0.821325 | 4.29E-53 | -1.69E-46 |
| MS.gene055240 | MS.gene073526 | 0.905071 | 6.32E-80 | -1.69E-46 |
| MS.gene055289 | MS.gene073526 | -0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene055340 | MS.gene073526 | 0.801945 | 7.08E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene073526 | -0.804898 | 1.73E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene073526 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene073526 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene073526 | 0.817489 | 3.21E-52 | -1.69E-46 |
| MS.gene056330 | MS.gene073526 | 0.834658 | 2.64E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene073526 | -0.80382 | 2.90E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene073526 | 0.84737 | 1.21E-59 | -1.69E-46 |
| MS.gene056591 | MS.gene073526 | 0.845422 | 4.10E-59 | -1.69E-46 |
| MS.gene056714 | MS.gene073526 | 0.812126 | 4.96E-51 | -1.69E-46 |
| MS.gene056715 | MS.gene073526 | 0.806297 | 8.81E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene073526 | 0.842817 | 2.05E-58 | -1.69E-46 |
| MS.gene056920 | MS.gene073526 | 0.857602 | 1.46E-62 | -1.69E-46 |
| MS.gene056922 | MS.gene073526 | 0.825699 | 4.06E-54 | -1.69E-46 |
| MS.gene056923 | MS.gene073526 | 0.806003 | 1.02E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene073526 | -0.818604 | 1.80E-52 | -1.69E-46 |
| MS.gene057261 | MS.gene073526 | 0.824029 | 1.01E-53 | -1.69E-46 |
| MS.gene057544 | MS.gene073526 | 0.822443 | 2.36E-53 | -1.69E-46 |
| MS.gene057550 | MS.gene073526 | 0.806095 | 9.71E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene073526 | 0.803214 | 3.88E-49 | -1.69E-46 |
| MS.gene057820 | MS.gene073526 | 0.810075 | 1.38E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene073526 | 0.801784 | 7.65E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene073526 | 0.803487 | 3.41E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene073526 | 0.801275 | 9.73E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene073526 | -0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene058381 | MS.gene073526 | 0.82953 | 4.89E-55 | -1.69E-46 |
| MS.gene058450 | MS.gene073526 | 0.83017 | 3.41E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene073526 | 0.842437 | 2.59E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene073526 | -0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene073526 | 0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene059038 | MS.gene073526 | 0.804076 | 2.57E-49 | -1.69E-46 |
| MS.gene059043 | MS.gene073526 | 0.80227 | 6.07E-49 | -1.69E-46 |
| MS.gene059328 | MS.gene073526 | 0.814164 | 1.77E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene073526 | 0.821614 | 3.68E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene073526 | 0.845501 | 3.91E-59 | -1.69E-46 |
| MS.gene059955 | MS.gene073526 | 0.876252 | 1.62E-68 | -1.69E-46 |
| MS.gene060087 | MS.gene073526 | 0.862542 | 4.71E-64 | -1.69E-46 |
| MS.gene060358 | MS.gene073526 | 0.803943 | 2.74E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene073526 | 0.814199 | 1.74E-51 | -1.69E-46 |
| MS.gene061038 | MS.gene073526 | 0.80513 | 1.55E-49 | -1.69E-46 |
| MS.gene061092 | MS.gene073526 | 0.829726 | 4.38E-55 | -1.69E-46 |
| MS.gene061094 | MS.gene073526 | 0.833285 | 5.82E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073526.t1 | MTR_4g021270 | 96.117 | 309 | 12 | 0 | 1 | 309 | 1 | 309 | 0.0 | 625 |
| MS.gene073526.t1 | MTR_3g068095 | 34.495 | 287 | 106 | 11 | 36 | 305 | 33 | 254 | 8.75e-32 | 119 |
| MS.gene073526.t1 | MTR_5g080660 | 46.825 | 126 | 45 | 4 | 4 | 122 | 7 | 117 | 5.83e-28 | 108 |
| MS.gene073526.t1 | MTR_5g014400 | 40.678 | 177 | 67 | 9 | 35 | 205 | 58 | 202 | 1.04e-26 | 105 |
| MS.gene073526.t1 | MTR_2g076060 | 79.070 | 43 | 8 | 1 | 51 | 92 | 41 | 83 | 4.61e-19 | 84.3 |
| MS.gene073526.t1 | MTR_1g070265 | 82.051 | 39 | 7 | 0 | 53 | 91 | 29 | 67 | 4.71e-17 | 78.2 |
| MS.gene073526.t1 | MTR_7g063220 | 66.667 | 42 | 14 | 0 | 59 | 100 | 24 | 65 | 4.28e-14 | 68.6 |
| MS.gene073526.t1 | MTR_4g064873 | 75.000 | 36 | 9 | 0 | 58 | 93 | 20 | 55 | 7.23e-14 | 68.9 |
| MS.gene073526.t1 | MTR_1g075430 | 69.444 | 36 | 11 | 0 | 59 | 94 | 18 | 53 | 6.31e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073526.t1 | AT2G37740 | 31.186 | 295 | 181 | 7 | 28 | 306 | 10 | 298 | 5.39e-28 | 110 |
| MS.gene073526.t1 | AT5G06070 | 54.737 | 95 | 32 | 2 | 1 | 93 | 2 | 87 | 1.81e-25 | 102 |
| MS.gene073526.t1 | AT4G17810 | 70.370 | 54 | 15 | 1 | 35 | 88 | 21 | 73 | 2.13e-21 | 89.7 |
| MS.gene073526.t1 | AT4G17810 | 70.370 | 54 | 15 | 1 | 35 | 88 | 21 | 73 | 2.42e-21 | 90.1 |
| MS.gene073526.t1 | AT2G42410 | 67.273 | 55 | 15 | 1 | 52 | 106 | 40 | 91 | 2.60e-19 | 85.1 |
| MS.gene073526.t1 | AT2G42410 | 67.273 | 55 | 15 | 1 | 52 | 106 | 40 | 91 | 2.60e-19 | 85.1 |
| MS.gene073526.t1 | AT2G42410 | 67.273 | 55 | 15 | 1 | 52 | 106 | 66 | 117 | 3.59e-19 | 85.1 |
| MS.gene073526.t1 | AT3G23130 | 81.395 | 43 | 8 | 0 | 51 | 93 | 37 | 79 | 1.80e-18 | 82.4 |
| MS.gene073526.t1 | AT3G09290 | 66.667 | 39 | 13 | 0 | 59 | 97 | 33 | 71 | 6.34e-12 | 63.5 |
Find 58 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGTTGAAAGGAGAAATT+AGG | 0.144993 | 4.1:-76876018 | None:intergenic |
| TCTACCTCCTCAATTGAATT+AGG | 0.148497 | 4.1:-76876370 | None:intergenic |
| AAATGATCAAGATGAGAATT+AGG | 0.222386 | 4.1:-76875938 | None:intergenic |
| ATCACCTTCGTCGGCTTCTA+AGG | 0.266590 | 4.1:+76875976 | MS.gene073526:CDS |
| AAACCACAAGTAGGAGAATT+AGG | 0.289218 | 4.1:-76875896 | None:intergenic |
| AACCCTTCTTCTTCTTGTTA+TGG | 0.304635 | 4.1:+76875575 | MS.gene073526:CDS |
| CCAAAGGTATAATAGATTCT+AGG | 0.312053 | 4.1:+76876128 | MS.gene073526:CDS |
| AGAGTTGAAAGGAGAAATTA+GGG | 0.331194 | 4.1:-76876017 | None:intergenic |
| CTTCTTGTTATGGTGATTCA+TGG | 0.338824 | 4.1:+76875585 | MS.gene073526:CDS |
| TAATTCTCCTACTTGTGGTT+TGG | 0.343165 | 4.1:+76875898 | MS.gene073526:CDS |
| CTACCTCCTCAATTGAATTA+GGG | 0.346783 | 4.1:-76876369 | None:intergenic |
| TGTAGCTATGAGCTTGAATT+TGG | 0.353912 | 4.1:+76876186 | MS.gene073526:CDS |
| AAGTAGGAGAATTAGGAAAT+AGG | 0.358290 | 4.1:-76875889 | None:intergenic |
| TTTAGGTCAGCACAAGCATT+AGG | 0.361635 | 4.1:+76875704 | MS.gene073526:CDS |
| CCTAGAATCTATTATACCTT+TGG | 0.378017 | 4.1:-76876128 | None:intergenic |
| TCGGCTTCTAAGGCTTTATT+CGG | 0.401138 | 4.1:+76875986 | MS.gene073526:CDS |
| CTTTCAACTCTTCTGAATCA+TGG | 0.401376 | 4.1:+76876029 | MS.gene073526:CDS |
| TTCAATTGAGGAGGTAGATC+TGG | 0.403141 | 4.1:+76876375 | MS.gene073526:CDS |
| GAACATAATATATCATTTCC+AGG | 0.405382 | 4.1:-76876061 | None:intergenic |
| GATTCTAGGTTTCGAGGTAA+AGG | 0.408364 | 4.1:+76876142 | MS.gene073526:CDS |
| ATTCTAGGTTTCGAGGTAAA+GGG | 0.409155 | 4.1:+76876143 | MS.gene073526:CDS |
| GATGCAGCTGCAGGGTCACT+TGG | 0.420108 | 4.1:+76875629 | MS.gene073526:CDS |
| TTATAAACATCTTGAATAAG+TGG | 0.423507 | 4.1:-76875860 | None:intergenic |
| TTTGCTGAAGATGCAGCTGC+AGG | 0.424497 | 4.1:+76875620 | MS.gene073526:CDS |
| GATCTTTGTATCAATGGAAC+AGG | 0.433376 | 4.1:+76875484 | None:intergenic |
| AATGATCAAGATGAGAATTA+GGG | 0.444196 | 4.1:-76875937 | None:intergenic |
| AAGCTACAAGAATATGATCT+TGG | 0.459400 | 4.1:-76875668 | None:intergenic |
| AGGAGGTAGATCTGGAGTTA+AGG | 0.476987 | 4.1:+76876383 | MS.gene073526:CDS |
| GTTCAACCCTAATTCAATTG+AGG | 0.483460 | 4.1:+76876363 | MS.gene073526:CDS |
| TTCTTGTTATGGTGATTCAT+GGG | 0.486889 | 4.1:+76875586 | MS.gene073526:CDS |
| AAGATTTCAATTGCAAGAAG+AGG | 0.493658 | 4.1:+76876257 | MS.gene073526:CDS |
| TTTCCTAATTCTCCTACTTG+TGG | 0.494089 | 4.1:+76875893 | MS.gene073526:CDS |
| ATGCAGCTGCAGGGTCACTT+GGG | 0.499136 | 4.1:+76875630 | MS.gene073526:CDS |
| GAATCATGGCTGAATTTACC+TGG | 0.500114 | 4.1:+76876043 | MS.gene073526:CDS |
| TTCAACTTCATCACCTTCGT+CGG | 0.506895 | 4.1:+76875967 | MS.gene073526:CDS |
| CTATTTCAAGCTCGTGATGA+TGG | 0.509417 | 4.1:-76875817 | None:intergenic |
| AATGGAACAGGATCAATGTT+GGG | 0.518180 | 4.1:+76875496 | None:intergenic |
| GTACTCTCAAATTCAACAAG+TGG | 0.518666 | 4.1:-76876226 | None:intergenic |
| TCACCATAACAAGAAGAAGA+AGG | 0.520396 | 4.1:-76875578 | None:intergenic |
| CAATGGAACAGGATCAATGT+TGG | 0.521807 | 4.1:+76875495 | None:intergenic |
| TATGCTACTTAACTATACCT+TGG | 0.528071 | 4.1:-76876419 | None:intergenic |
| CTACAAGAATATGATCTTGG+TGG | 0.544295 | 4.1:-76875665 | None:intergenic |
| TGGAGTTAAGGCTTGGTACA+AGG | 0.549906 | 4.1:+76876395 | MS.gene073526:CDS |
| TGCAGCTGCAGGGTCACTTG+GGG | 0.554361 | 4.1:+76875631 | MS.gene073526:CDS |
| TTGCTGAAGATGCAGCTGCA+GGG | 0.559256 | 4.1:+76875621 | MS.gene073526:CDS |
| CATGATTCAGAAGAGTTGAA+AGG | 0.568556 | 4.1:-76876028 | None:intergenic |
| GTAGATCTGGAGTTAAGGCT+TGG | 0.574970 | 4.1:+76876388 | MS.gene073526:CDS |
| TTTGATCATAAAGTCTCCAA+AGG | 0.581337 | 4.1:+76876112 | MS.gene073526:CDS |
| ATAATAGATTCTAGGTTTCG+AGG | 0.582395 | 4.1:+76876136 | MS.gene073526:CDS |
| CACCATAACAAGAAGAAGAA+GGG | 0.582469 | 4.1:-76875577 | None:intergenic |
| TTCTAGGTTTCGAGGTAAAG+GGG | 0.591482 | 4.1:+76876144 | MS.gene073526:CDS |
| CAACCCTAATTCAATTGAGG+AGG | 0.592265 | 4.1:+76876366 | MS.gene073526:CDS |
| TTATAAACCAAACCACAAGT+AGG | 0.601660 | 4.1:-76875905 | None:intergenic |
| TCTAGGTTTCGAGGTAAAGG+GGG | 0.621509 | 4.1:+76876145 | MS.gene073526:CDS |
| GCAGCTGCAGGGTCACTTGG+GGG | 0.624450 | 4.1:+76875632 | MS.gene073526:CDS |
| AAGGCTTGGTACAAGGTCCA+AGG | 0.631211 | 4.1:+76876402 | MS.gene073526:CDS |
| AGGTCAGCACAAGCATTAGG+TGG | 0.642240 | 4.1:+76875707 | MS.gene073526:CDS |
| AAAGCCTTAGAAGCCGACGA+AGG | 0.711061 | 4.1:-76875980 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAACATCTTGAATAAG+TGG | - | chr4.1:76875863-76875882 | None:intergenic | 20.0% |
| !!! | CATATTTTGTTGTTTATCAA+AGG | - | chr4.1:76876326-76876345 | None:intergenic | 20.0% |
| ! | AAATGATCAAGATGAGAATT+AGG | - | chr4.1:76875941-76875960 | None:intergenic | 25.0% |
| ! | AATGATCAAGATGAGAATTA+GGG | - | chr4.1:76875940-76875959 | None:intergenic | 25.0% |
| ! | GAACATAATATATCATTTCC+AGG | - | chr4.1:76876064-76876083 | None:intergenic | 25.0% |
| !! | TAAAGAATCTGATCATTTTG+TGG | - | chr4.1:76875779-76875798 | None:intergenic | 25.0% |
| AAGAGTTGAAAGGAGAAATT+AGG | - | chr4.1:76876021-76876040 | None:intergenic | 30.0% | |
| AAGATTTCAATTGCAAGAAG+AGG | + | chr4.1:76876257-76876276 | MS.gene073526:CDS | 30.0% | |
| AAGCTACAAGAATATGATCT+TGG | - | chr4.1:76875671-76875690 | None:intergenic | 30.0% | |
| AAGTAGGAGAATTAGGAAAT+AGG | - | chr4.1:76875892-76875911 | None:intergenic | 30.0% | |
| AGAGTTGAAAGGAGAAATTA+GGG | - | chr4.1:76876020-76876039 | None:intergenic | 30.0% | |
| ATAATAGATTCTAGGTTTCG+AGG | + | chr4.1:76876136-76876155 | MS.gene073526:CDS | 30.0% | |
| CCTAGAATCTATTATACCTT+TGG | - | chr4.1:76876131-76876150 | None:intergenic | 30.0% | |
| TTATAAACCAAACCACAAGT+AGG | - | chr4.1:76875908-76875927 | None:intergenic | 30.0% | |
| TTTGATCATAAAGTCTCCAA+AGG | + | chr4.1:76876112-76876131 | MS.gene073526:CDS | 30.0% | |
| ! | CCAAAGGTATAATAGATTCT+AGG | + | chr4.1:76876128-76876147 | MS.gene073526:CDS | 30.0% |
| ! | TTCTTGTTATGGTGATTCAT+GGG | + | chr4.1:76875586-76875605 | MS.gene073526:CDS | 30.0% |
| AAACCACAAGTAGGAGAATT+AGG | - | chr4.1:76875899-76875918 | None:intergenic | 35.0% | |
| AACCCTTCTTCTTCTTGTTA+TGG | + | chr4.1:76875575-76875594 | MS.gene073526:CDS | 35.0% | |
| ATTCTAGGTTTCGAGGTAAA+GGG | + | chr4.1:76876143-76876162 | MS.gene073526:CDS | 35.0% | |
| CACCATAACAAGAAGAAGAA+GGG | - | chr4.1:76875580-76875599 | None:intergenic | 35.0% | |
| CATGATTCAGAAGAGTTGAA+AGG | - | chr4.1:76876031-76876050 | None:intergenic | 35.0% | |
| CTACAAGAATATGATCTTGG+TGG | - | chr4.1:76875668-76875687 | None:intergenic | 35.0% | |
| CTACCTCCTCAATTGAATTA+GGG | - | chr4.1:76876372-76876391 | None:intergenic | 35.0% | |
| CTTTCAACTCTTCTGAATCA+TGG | + | chr4.1:76876029-76876048 | MS.gene073526:CDS | 35.0% | |
| GTACTCTCAAATTCAACAAG+TGG | - | chr4.1:76876229-76876248 | None:intergenic | 35.0% | |
| GTTCAACCCTAATTCAATTG+AGG | + | chr4.1:76876363-76876382 | MS.gene073526:CDS | 35.0% | |
| TAATTCTCCTACTTGTGGTT+TGG | + | chr4.1:76875898-76875917 | MS.gene073526:CDS | 35.0% | |
| TCACCATAACAAGAAGAAGA+AGG | - | chr4.1:76875581-76875600 | None:intergenic | 35.0% | |
| TCTACCTCCTCAATTGAATT+AGG | - | chr4.1:76876373-76876392 | None:intergenic | 35.0% | |
| TGTAGCTATGAGCTTGAATT+TGG | + | chr4.1:76876186-76876205 | MS.gene073526:CDS | 35.0% | |
| TTTCCTAATTCTCCTACTTG+TGG | + | chr4.1:76875893-76875912 | MS.gene073526:CDS | 35.0% | |
| ! | CTTCTTGTTATGGTGATTCA+TGG | + | chr4.1:76875585-76875604 | MS.gene073526:CDS | 35.0% |
| ! | GCTTTTGTAGAAGAGAGTTT+AGG | + | chr4.1:76875687-76875706 | MS.gene073526:CDS | 35.0% |
| CAACCCTAATTCAATTGAGG+AGG | + | chr4.1:76876366-76876385 | MS.gene073526:CDS | 40.0% | |
| CTATTTCAAGCTCGTGATGA+TGG | - | chr4.1:76875820-76875839 | None:intergenic | 40.0% | |
| GAATCATGGCTGAATTTACC+TGG | + | chr4.1:76876043-76876062 | MS.gene073526:CDS | 40.0% | |
| GATTCTAGGTTTCGAGGTAA+AGG | + | chr4.1:76876142-76876161 | MS.gene073526:CDS | 40.0% | |
| TTCAACTTCATCACCTTCGT+CGG | + | chr4.1:76875967-76875986 | MS.gene073526:CDS | 40.0% | |
| TTCAATTGAGGAGGTAGATC+TGG | + | chr4.1:76876375-76876394 | MS.gene073526:CDS | 40.0% | |
| TTCTAGGTTTCGAGGTAAAG+GGG | + | chr4.1:76876144-76876163 | MS.gene073526:CDS | 40.0% | |
| TTTAGGTCAGCACAAGCATT+AGG | + | chr4.1:76875704-76875723 | MS.gene073526:CDS | 40.0% | |
| !! | TCGGCTTCTAAGGCTTTATT+CGG | + | chr4.1:76875986-76876005 | MS.gene073526:CDS | 40.0% |
| TCTAGGTTTCGAGGTAAAGG+GGG | + | chr4.1:76876145-76876164 | MS.gene073526:CDS | 45.0% | |
| ! | AGGAGGTAGATCTGGAGTTA+AGG | + | chr4.1:76876383-76876402 | MS.gene073526:CDS | 45.0% |
| ! | GTAGATCTGGAGTTAAGGCT+TGG | + | chr4.1:76876388-76876407 | MS.gene073526:CDS | 45.0% |
| ! | TGGAGTTAAGGCTTGGTACA+AGG | + | chr4.1:76876395-76876414 | MS.gene073526:CDS | 45.0% |
| AAAGCCTTAGAAGCCGACGA+AGG | - | chr4.1:76875983-76876002 | None:intergenic | 50.0% | |
| AGGTCAGCACAAGCATTAGG+TGG | + | chr4.1:76875707-76875726 | MS.gene073526:CDS | 50.0% | |
| GGTCACTTGGGGGATGTATA+TGG | + | chr4.1:76875642-76875661 | MS.gene073526:CDS | 50.0% | |
| TTGCTGAAGATGCAGCTGCA+GGG | + | chr4.1:76875621-76875640 | MS.gene073526:CDS | 50.0% | |
| TTTGCTGAAGATGCAGCTGC+AGG | + | chr4.1:76875620-76875639 | MS.gene073526:CDS | 50.0% | |
| ! | AAGGCTTGGTACAAGGTCCA+AGG | + | chr4.1:76876402-76876421 | MS.gene073526:CDS | 50.0% |
| !! | ATCACCTTCGTCGGCTTCTA+AGG | + | chr4.1:76875976-76875995 | MS.gene073526:CDS | 50.0% |
| ATGCAGCTGCAGGGTCACTT+GGG | + | chr4.1:76875630-76875649 | MS.gene073526:CDS | 55.0% | |
| GATGCAGCTGCAGGGTCACT+TGG | + | chr4.1:76875629-76875648 | MS.gene073526:CDS | 60.0% | |
| TGCAGCTGCAGGGTCACTTG+GGG | + | chr4.1:76875631-76875650 | MS.gene073526:CDS | 60.0% | |
| GCAGCTGCAGGGTCACTTGG+GGG | + | chr4.1:76875632-76875651 | MS.gene073526:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 76875497 | 76876429 | 76875497 | ID=MS.gene073526 |
| chr4.1 | mRNA | 76875497 | 76876429 | 76875497 | ID=MS.gene073526.t1;Parent=MS.gene073526 |
| chr4.1 | exon | 76875497 | 76876429 | 76875497 | ID=MS.gene073526.t1.exon1;Parent=MS.gene073526.t1 |
| chr4.1 | CDS | 76875497 | 76876429 | 76875497 | ID=cds.MS.gene073526.t1;Parent=MS.gene073526.t1 |
| Gene Sequence |
| Protein sequence |
