Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95037.t1 | XP_013458738.1 | 95.9 | 338 | 12 | 1 | 1 | 338 | 1 | 336 | 4.00E-175 | 624 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95037.t1 | Q4LDF9 | 79.9 | 343 | 50 | 5 | 1 | 338 | 1 | 329 | 2.9e-150 | 532.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95037.t1 | A0A072V3P1 | 95.9 | 338 | 12 | 1 | 1 | 338 | 1 | 336 | 2.9e-175 | 624.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene95037 | 0.859612 | 3.67E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene95037 | 0.813812 | 2.12E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene95037 | 0.842186 | 3.02E-58 | -1.69E-46 |
| MS.gene049232 | MS.gene95037 | 0.821642 | 3.62E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene95037 | 0.87638 | 1.46E-68 | -1.69E-46 |
| MS.gene049320 | MS.gene95037 | 0.859107 | 5.20E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene95037 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene049627 | MS.gene95037 | 0.900798 | 5.11E-78 | -1.69E-46 |
| MS.gene049633 | MS.gene95037 | 0.822442 | 2.36E-53 | -1.69E-46 |
| MS.gene049865 | MS.gene95037 | 0.842379 | 2.68E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene95037 | 0.836737 | 7.85E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene95037 | 0.881166 | 3.01E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene95037 | 0.883821 | 3.24E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene95037 | 0.828592 | 8.25E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene95037 | 0.800296 | 1.54E-48 | -1.69E-46 |
| MS.gene050333 | MS.gene95037 | 0.841011 | 6.15E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene95037 | 0.808535 | 2.95E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene95037 | 0.88987 | 1.64E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene95037 | 0.881893 | 1.64E-70 | -1.69E-46 |
| MS.gene050577 | MS.gene95037 | 0.882003 | 1.50E-70 | -1.69E-46 |
| MS.gene050612 | MS.gene95037 | 0.867205 | 1.62E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene95037 | 0.84349 | 1.36E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene95037 | 0.869218 | 3.65E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene95037 | 0.811396 | 7.15E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene95037 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene95037 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene95037 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene050876 | MS.gene95037 | 0.878197 | 3.41E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene95037 | 0.892163 | 2.05E-74 | -1.69E-46 |
| MS.gene050904 | MS.gene95037 | 0.878711 | 2.25E-69 | -1.69E-46 |
| MS.gene050950 | MS.gene95037 | 0.819896 | 9.13E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene95037 | 0.891757 | 2.97E-74 | -1.69E-46 |
| MS.gene05100 | MS.gene95037 | 0.822952 | 1.80E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene95037 | 0.87714 | 7.98E-69 | -1.69E-46 |
| MS.gene051551 | MS.gene95037 | 0.828995 | 6.59E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene95037 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene95037 | 0.834947 | 2.23E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene95037 | 0.835818 | 1.34E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene95037 | 0.859003 | 5.58E-63 | -1.69E-46 |
| MS.gene052486 | MS.gene95037 | 0.870917 | 1.02E-66 | -1.69E-46 |
| MS.gene052670 | MS.gene95037 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene95037 | 0.826665 | 2.40E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene95037 | 0.854329 | 1.32E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene95037 | 0.807492 | 4.92E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene95037 | 0.847577 | 1.06E-59 | -1.69E-46 |
| MS.gene053284 | MS.gene95037 | 0.802051 | 6.74E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene95037 | 0.853143 | 2.90E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene95037 | 0.816249 | 6.10E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene95037 | 0.815078 | 1.11E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene95037 | 0.800348 | 1.50E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene95037 | 0.848638 | 5.39E-60 | -1.69E-46 |
| MS.gene054638 | MS.gene95037 | 0.851375 | 9.24E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene95037 | 0.832891 | 7.30E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene95037 | 0.880231 | 6.51E-70 | -1.69E-46 |
| MS.gene054954 | MS.gene95037 | 0.879951 | 8.19E-70 | -1.69E-46 |
| MS.gene055362 | MS.gene95037 | 0.868892 | 4.66E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene95037 | 0.849184 | 3.81E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene95037 | 0.854443 | 1.23E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene95037 | 0.841004 | 6.18E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene95037 | 0.816423 | 5.57E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene95037 | 0.847349 | 1.22E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene95037 | 0.814161 | 1.77E-51 | -1.69E-46 |
| MS.gene055849 | MS.gene95037 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene95037 | 0.841428 | 4.78E-58 | -1.69E-46 |
| MS.gene056083 | MS.gene95037 | 0.80679 | 6.93E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene95037 | 0.807987 | 3.86E-50 | -1.69E-46 |
| MS.gene056409 | MS.gene95037 | 0.839631 | 1.41E-57 | -1.69E-46 |
| MS.gene056449 | MS.gene95037 | 0.80749 | 4.93E-50 | -1.69E-46 |
| MS.gene056450 | MS.gene95037 | 0.860036 | 2.73E-63 | -1.69E-46 |
| MS.gene056504 | MS.gene95037 | 0.855542 | 5.89E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene95037 | 0.858744 | 6.67E-63 | -1.69E-46 |
| MS.gene056550 | MS.gene95037 | -0.833481 | 5.20E-56 | -1.69E-46 |
| MS.gene056610 | MS.gene95037 | 0.856165 | 3.87E-62 | -1.69E-46 |
| MS.gene056657 | MS.gene95037 | 0.847816 | 9.10E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene95037 | 0.895165 | 1.24E-75 | -1.69E-46 |
| MS.gene056898 | MS.gene95037 | 0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene95037 | 0.84206 | 3.26E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene95037 | 0.871253 | 7.87E-67 | -1.69E-46 |
| MS.gene057872 | MS.gene95037 | 0.816599 | 5.09E-52 | -1.69E-46 |
| MS.gene057986 | MS.gene95037 | 0.857844 | 1.24E-62 | -1.69E-46 |
| MS.gene058335 | MS.gene95037 | 0.818377 | 2.02E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene95037 | 0.823081 | 1.68E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene95037 | 0.853999 | 1.65E-61 | -1.69E-46 |
| MS.gene058544 | MS.gene95037 | 0.848892 | 4.59E-60 | -1.69E-46 |
| MS.gene058719 | MS.gene95037 | 0.875038 | 4.22E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene95037 | 0.870295 | 1.63E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene95037 | 0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene95037 | 0.800395 | 1.47E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene95037 | 0.881388 | 2.50E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene95037 | 0.874954 | 4.51E-68 | -1.69E-46 |
| MS.gene059026 | MS.gene95037 | 0.808945 | 2.41E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene95037 | 0.840191 | 1.01E-57 | -1.69E-46 |
| MS.gene059181 | MS.gene95037 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene95037 | 0.884049 | 2.67E-71 | -1.69E-46 |
| MS.gene059718 | MS.gene95037 | 0.861075 | 1.32E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene95037 | 0.853259 | 2.69E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene95037 | 0.828374 | 9.32E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene95037 | 0.859175 | 4.96E-63 | -1.69E-46 |
| MS.gene059865 | MS.gene95037 | 0.850787 | 1.35E-60 | -1.69E-46 |
| MS.gene06000 | MS.gene95037 | 0.821422 | 4.07E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene95037 | 0.865858 | 4.35E-65 | -1.69E-46 |
| MS.gene060762 | MS.gene95037 | 0.875607 | 2.70E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene95037 | 0.903095 | 4.94E-79 | -1.69E-46 |
| MS.gene06092 | MS.gene95037 | 0.827979 | 1.16E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene95037 | 0.857666 | 1.40E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene95037 | 0.869146 | 3.85E-66 | -1.69E-46 |
| MS.gene061171 | MS.gene95037 | 0.80479 | 1.82E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95037.t1 | MTR_4g134950 | 96.746 | 338 | 9 | 1 | 1 | 338 | 1 | 336 | 0.0 | 674 |
| MS.gene95037.t1 | MTR_4g134950 | 96.063 | 254 | 8 | 1 | 1 | 254 | 1 | 252 | 5.15e-179 | 496 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95037.t1 | AT2G43950 | 63.295 | 346 | 113 | 3 | 2 | 338 | 3 | 343 | 2.60e-153 | 434 |
| MS.gene95037.t1 | AT2G43950 | 58.958 | 307 | 112 | 3 | 2 | 299 | 3 | 304 | 6.07e-121 | 352 |
Find 94 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGGAGCGTGTAATTATT+AGG | 0.200366 | 8.2:+64540 | None:intergenic |
| CTGAAAAGATAATTTCAATT+TGG | 0.215408 | 8.2:+64350 | None:intergenic |
| CGTGTAATTATTAGGGTTTC+CGG | 0.226456 | 8.2:+64548 | None:intergenic |
| AATTGAACTTTCATCTTCAT+TGG | 0.277986 | 8.2:+61399 | None:intergenic |
| ATTTGACGGGAGAGAAAGTA+TGG | 0.298323 | 8.2:+63668 | None:intergenic |
| CCTTGGCTGGGCATCCCTTT+GGG | 0.317934 | 8.2:-61977 | MS.gene95037:intron |
| GGAAATCTGAAAGTTGCTTT+TGG | 0.321527 | 8.2:+64020 | None:intergenic |
| ATTCGGAGGTTCGCCTTGGC+TGG | 0.321634 | 8.2:-61990 | MS.gene95037:CDS |
| GCCTTGGCTGGGCATCCCTT+TGG | 0.333645 | 8.2:-61978 | MS.gene95037:CDS |
| ACAATTGCGATTCGAACTAT+TGG | 0.339553 | 8.2:-62068 | MS.gene95037:CDS |
| TATGGAGCGTGTAATTATTA+GGG | 0.342261 | 8.2:+64541 | None:intergenic |
| AGCACCAGTGAGTTTGAATC+TGG | 0.355796 | 8.2:+64209 | None:intergenic |
| AGAAGAGATGGGACATTTGA+TGG | 0.358516 | 8.2:-61320 | None:intergenic |
| TCTGTCAGTGGGATTCTTAA+AGG | 0.372625 | 8.2:-63921 | MS.gene95037:CDS |
| CTAGAGCACTGTGGTCTTCA+AGG | 0.384543 | 8.2:+64256 | None:intergenic |
| TTCCTTCAGGTTGGTGATGA+AGG | 0.388318 | 8.2:-61441 | MS.gene95037:intron |
| TACTCGGAAATGACAAGATA+TGG | 0.407168 | 8.2:+64460 | None:intergenic |
| ATTTAAAGCTGGTTATGATT+CGG | 0.428310 | 8.2:-62007 | MS.gene95037:CDS |
| AAGACCAAACCTACGCTTGA+AGG | 0.430680 | 8.2:+63632 | None:intergenic |
| TTGGTCTTTCTGACAAGTTA+AGG | 0.431557 | 8.2:-63617 | MS.gene95037:intron |
| TTTGTTGACGGCGGCGGCGG+CGG | 0.438275 | 8.2:+64483 | None:intergenic |
| AGAGAAAGAGGAGGAGCAGC+AGG | 0.441827 | 8.2:-63976 | MS.gene95037:CDS |
| CAACTACCGCCGGTGAGGAT+TGG | 0.444311 | 8.2:+64514 | None:intergenic |
| AAAATTTACAGGAAACTTTG+TGG | 0.453050 | 8.2:+64385 | None:intergenic |
| AGAGGAGGAGCAGCAGGAGG+AGG | 0.453391 | 8.2:-63970 | MS.gene95037:CDS |
| TGCGCTTTCGCTGTCGAACT+CGG | 0.456394 | 8.2:+64416 | None:intergenic |
| TTTGCCTTCAAGCGTAGGTT+TGG | 0.457188 | 8.2:-63636 | MS.gene95037:CDS |
| TGGTTTGTTGACGGCGGCGG+CGG | 0.466893 | 8.2:+64480 | None:intergenic |
| GAAGATTTCAAATTTAAAGC+TGG | 0.470602 | 8.2:-62018 | MS.gene95037:CDS |
| TGATAGTTGAAGTGCATAGC+CGG | 0.474867 | 8.2:+64131 | None:intergenic |
| ATATGGTTTGTTGACGGCGG+CGG | 0.478912 | 8.2:+64477 | None:intergenic |
| GTGGAGATGGATTCAGCAAC+CGG | 0.479701 | 8.2:-64567 | None:intergenic |
| TTCGGAGGTTCGCCTTGGCT+GGG | 0.481241 | 8.2:-61989 | MS.gene95037:CDS |
| GCCACTTCCATCCGCTGGAT+TGG | 0.483583 | 8.2:-64106 | MS.gene95037:intron |
| ATTCTGAGGGCAGGCCTACT+CGG | 0.483618 | 8.2:+64444 | None:intergenic |
| TATGATTCGGAGGTTCGCCT+TGG | 0.485674 | 8.2:-61994 | MS.gene95037:CDS |
| GATAGTTGAAGTGCATAGCC+GGG | 0.505267 | 8.2:+64132 | None:intergenic |
| GAATCTGGGACCAACGTCAA+TGG | 0.510577 | 8.2:+64224 | None:intergenic |
| ACCAATCCAGCGGATGGAAG+TGG | 0.512331 | 8.2:+64105 | None:intergenic |
| CTTCAGGTTGGTGATGAAGG+TGG | 0.513813 | 8.2:-61438 | MS.gene95037:intron |
| GACAAGATATGGTTTGTTGA+CGG | 0.514737 | 8.2:+64471 | None:intergenic |
| AGTTTCGTTACAAGAGAAAG+AGG | 0.517878 | 8.2:-63988 | MS.gene95037:CDS |
| AAATTTGAAATCTTCACCAT+AGG | 0.521461 | 8.2:+62026 | None:intergenic |
| TGTCATTTGCCTTCAAGCGT+AGG | 0.530223 | 8.2:-63641 | MS.gene95037:CDS |
| TGTTTCGGATTAAGAAGAGA+TGG | 0.531407 | 8.2:-61332 | MS.gene95037:CDS |
| GCAAATGACAAATCATTTGA+CGG | 0.532446 | 8.2:+63654 | None:intergenic |
| CACTGGTGCTCATGATGTCA+AGG | 0.533292 | 8.2:-64196 | MS.gene95037:CDS |
| TCAACGCCACTTCCATCCGC+TGG | 0.542399 | 8.2:-64111 | MS.gene95037:CDS |
| TCAATTCATCATCCTTGTAG+TGG | 0.542879 | 8.2:+63871 | None:intergenic |
| GCAACTTTCAGATTTCCTCT+AGG | 0.543233 | 8.2:-64014 | MS.gene95037:CDS |
| AAAATTCCTTGTCTGTCAGT+GGG | 0.547827 | 8.2:-63932 | MS.gene95037:CDS |
| GCTGTCTACAAGCATACCTA+TGG | 0.550366 | 8.2:-62042 | MS.gene95037:CDS |
| CAAGGTCGTAGTGGAGGCTA+AGG | 0.551757 | 8.2:+64274 | None:intergenic |
| CAAATGACAAATCATTTGAC+GGG | 0.553334 | 8.2:+63655 | None:intergenic |
| TTCAGGTTGGTGATGAAGGT+GGG | 0.556339 | 8.2:-61437 | MS.gene95037:intron |
| GTTTCGGATTAAGAAGAGAT+GGG | 0.558012 | 8.2:-61331 | MS.gene95037:CDS |
| AAATGAGACACGTACCCAAA+GGG | 0.561109 | 8.2:+61963 | None:intergenic |
| CAATTCATCATCCTTGTAGT+GGG | 0.563611 | 8.2:+63872 | None:intergenic |
| CGAACTCGGTGGTAATTCTG+AGG | 0.569969 | 8.2:+64430 | None:intergenic |
| GGTCCCAGATTCAAACTCAC+TGG | 0.571945 | 8.2:-64213 | MS.gene95037:CDS |
| GAAAGAGGAGGAGCAGCAGG+AGG | 0.574367 | 8.2:-63973 | MS.gene95037:CDS |
| ATATCTTGTCATTTCCGAGT+AGG | 0.574605 | 8.2:-64458 | MS.gene95037:CDS |
| TCGGTGGTAATTCTGAGGGC+AGG | 0.578370 | 8.2:+64435 | None:intergenic |
| CCCAAAGGGATGCCCAGCCA+AGG | 0.579829 | 8.2:+61977 | None:intergenic |
| GAACATACCAATCCAGCGGA+TGG | 0.588139 | 8.2:+64099 | None:intergenic |
| AAGATAATTTCAATTTGGCG+AGG | 0.598597 | 8.2:+64355 | None:intergenic |
| TGTCTGCACTGCCCACTACA+AGG | 0.599268 | 8.2:-63883 | MS.gene95037:CDS |
| TAAAGCTGGTTATGATTCGG+AGG | 0.600014 | 8.2:-62004 | MS.gene95037:CDS |
| GAAGTTAAGATACCGCTACA+AGG | 0.605149 | 8.2:-63850 | MS.gene95037:intron |
| GTTGCTAATATCGCTGACCC+CGG | 0.605885 | 8.2:-64150 | MS.gene95037:CDS |
| GTTAAGAGTTCCATTGACGT+TGG | 0.609020 | 8.2:-64234 | MS.gene95037:CDS |
| TATGAAGCTGATCTGAGGCT+CGG | 0.610187 | 8.2:+64305 | None:intergenic |
| CCATAAAATCCAATCCTCAC+CGG | 0.611947 | 8.2:-64523 | MS.gene95037:CDS |
| CATGATGTCAAGGCTCAACA+AGG | 0.612893 | 8.2:-64186 | MS.gene95037:CDS |
| GGTCTTCAAGGTCGTAGTGG+AGG | 0.622677 | 8.2:+64268 | None:intergenic |
| AAGAATCCCACTGACAGACA+AGG | 0.625574 | 8.2:+63926 | None:intergenic |
| TGTGGTCTTCAAGGTCGTAG+TGG | 0.626033 | 8.2:+64265 | None:intergenic |
| GGCAGAGGATCAACTACCGC+CGG | 0.628335 | 8.2:+64504 | None:intergenic |
| TTCGATATGAAGCTGATCTG+AGG | 0.636620 | 8.2:+64300 | None:intergenic |
| GCACCAGTGAGTTTGAATCT+GGG | 0.638299 | 8.2:+64210 | None:intergenic |
| GAACTCGGTGGTAATTCTGA+GGG | 0.640245 | 8.2:+64431 | None:intergenic |
| AGGATCAACTACCGCCGGTG+AGG | 0.644689 | 8.2:+64509 | None:intergenic |
| TTCGTTACAAGAGAAAGAGG+AGG | 0.646802 | 8.2:-63985 | MS.gene95037:CDS |
| AGCAGTAATATACCTTGTAG+CGG | 0.666629 | 8.2:+63838 | None:intergenic |
| TGTCAAGGCTCAACAAGGAG+AGG | 0.670822 | 8.2:-64181 | MS.gene95037:CDS |
| AAGATATGGTTTGTTGACGG+CGG | 0.675992 | 8.2:+64474 | None:intergenic |
| GCTTTCGCTGTCGAACTCGG+TGG | 0.680041 | 8.2:+64419 | None:intergenic |
| TTTGACGGGAGAGAAAGTAT+GGG | 0.685254 | 8.2:+63669 | None:intergenic |
| ATAGTTGAAGTGCATAGCCG+GGG | 0.690042 | 8.2:+64133 | None:intergenic |
| AAAAGAACATACCAATCCAG+CGG | 0.697521 | 8.2:+64095 | None:intergenic |
| TCAACAAGGAGAGGTTACAA+TGG | 0.698086 | 8.2:-64172 | MS.gene95037:CDS |
| TGTAACGAAACTTCACCTAG+AGG | 0.699865 | 8.2:+63999 | None:intergenic |
| TAAAATCCAATCCTCACCGG+CGG | 0.708233 | 8.2:-64520 | MS.gene95037:CDS |
| AACTCTTAACTAGAGCACTG+TGG | 0.799938 | 8.2:+64247 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGATAAAATGATAAAAAT+TGG | + | chr8.2:62079-62098 | None:intergenic | 10.0% |
| !! | TAGATAAAATGATAAAAATT+GGG | + | chr8.2:62078-62097 | None:intergenic | 10.0% |
| !!! | TTTGTTTATTTTAAATTACA+AGG | + | chr8.2:63193-63212 | None:intergenic | 10.0% |
| !! | AAATCTTAGAAAATGAAAAT+GGG | - | chr8.2:62941-62960 | MS.gene95037:intron | 15.0% |
| !! | AAATTAATGTTTCATGTAAA+AGG | + | chr8.2:63336-63355 | None:intergenic | 15.0% |
| !! | CAAAAAAAATTCAAGTAAAA+AGG | + | chr8.2:64267-64286 | None:intergenic | 15.0% |
| !! | CACAACAAATAAAAAAATTA+GGG | + | chr8.2:63260-63279 | None:intergenic | 15.0% |
| !! | TAAATCTTAGAAAATGAAAA+TGG | - | chr8.2:62940-62959 | MS.gene95037:intron | 15.0% |
| !! | TCAAATATCATAAAAGAAAA+TGG | + | chr8.2:63047-63066 | None:intergenic | 15.0% |
| !! | TCACAACAAATAAAAAAATT+AGG | + | chr8.2:63261-63280 | None:intergenic | 15.0% |
| !!! | TAAATTTTTCAAATAAATGC+AGG | - | chr8.2:62172-62191 | MS.gene95037:intron | 15.0% |
| !! | AAATAAATGAATGATAGTAG+AGG | + | chr8.2:61833-61852 | None:intergenic | 20.0% |
| !! | AAATGATTTCACAAAGTAAA+TGG | + | chr8.2:62687-62706 | None:intergenic | 20.0% |
| !! | AATGATTTCACAAAGTAAAT+GGG | + | chr8.2:62686-62705 | None:intergenic | 20.0% |
| !! | ATAATGTTATACTGAACAAA+CGG | + | chr8.2:64222-64241 | None:intergenic | 20.0% |
| !! | ATAGGAAAAAAATTCTTAAG+AGG | + | chr8.2:62309-62328 | None:intergenic | 20.0% |
| !! | ATTCTAATGAGATTATATTG+AGG | + | chr8.2:63305-63324 | None:intergenic | 20.0% |
| !! | CTGAAAAGATAATTTCAATT+TGG | + | chr8.2:61537-61556 | None:intergenic | 20.0% |
| !! | TAGGAAAAAAATTCTTAAGA+GGG | + | chr8.2:62308-62327 | None:intergenic | 20.0% |
| !! | TTCTAATGAGATTATATTGA+GGG | + | chr8.2:63304-63323 | None:intergenic | 20.0% |
| !!! | AAATTTTCAGAAACTTTTAG+TGG | - | chr8.2:63071-63090 | MS.gene95037:intron | 20.0% |
| !!! | ATTGTTAGCATTTTCTTTTT+TGG | - | chr8.2:63541-63560 | MS.gene95037:intron | 20.0% |
| !!! | GTTAAAATTGTTTTATCAAG+TGG | - | chr8.2:62366-62385 | MS.gene95037:intron | 20.0% |
| !!! | TATTTTAAATTACAAGGAGA+TGG | + | chr8.2:63187-63206 | None:intergenic | 20.0% |
| !!! | TCTTTCTTATTTATCTCATA+GGG | + | chr8.2:62637-62656 | None:intergenic | 20.0% |
| !!! | TTCTTTCTTATTTATCTCAT+AGG | + | chr8.2:62638-62657 | None:intergenic | 20.0% |
| !!! | TTTAACATAACATTTCTAGA+TGG | + | chr8.2:62352-62371 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGCCATATTAGTA+AGG | + | chr8.2:63774-63793 | None:intergenic | 20.0% |
| ! | AAAATTTACAGGAAACTTTG+TGG | + | chr8.2:61502-61521 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAATGAAGAGAA+CGG | - | chr8.2:62649-62668 | MS.gene95037:intron | 25.0% |
| ! | AATTGAACTTTCATCTTCAT+TGG | + | chr8.2:64488-64507 | None:intergenic | 25.0% |
| ! | ATCATAAAAGAAAATGGTGA+AGG | + | chr8.2:63041-63060 | None:intergenic | 25.0% |
| ! | ATGATTTCACAAAGTAAATG+GGG | + | chr8.2:62685-62704 | None:intergenic | 25.0% |
| ! | ATTAGAAATGCAAAATCAAC+AGG | + | chr8.2:63998-64017 | None:intergenic | 25.0% |
| ! | CAATTGTAATAGAGAGAATA+TGG | + | chr8.2:63148-63167 | None:intergenic | 25.0% |
| ! | CACATATTATTGCAAGTAAT+AGG | + | chr8.2:62327-62346 | None:intergenic | 25.0% |
| ! | CATCATTATACTGAGAAATT+CGG | - | chr8.2:64363-64382 | MS.gene95037:CDS | 25.0% |
| ! | GAATTTCTTGAAATACAATC+TGG | - | chr8.2:62483-62502 | MS.gene95037:intron | 25.0% |
| ! | GTTATGAAGAATGTAAGTTT+AGG | + | chr8.2:63118-63137 | None:intergenic | 25.0% |
| ! | TCAAAAAATCCTTTATATGC+AGG | + | chr8.2:64158-64177 | None:intergenic | 25.0% |
| ! | TTCATCAACTACTTTACATT+TGG | - | chr8.2:63369-63388 | MS.gene95037:intron | 25.0% |
| !! | AAATTTGAAATCTTCACCAT+AGG | + | chr8.2:63861-63880 | None:intergenic | 25.0% |
| !! | ATTTAAAGCTGGTTATGATT+CGG | - | chr8.2:63877-63896 | MS.gene95037:CDS | 25.0% |
| !! | CAAAGTTTCCTGTAAATTTT+TGG | - | chr8.2:61502-61521 | MS.gene95037:intron | 25.0% |
| !! | CTTAAAGGTCAATTTTTGAA+TGG | - | chr8.2:61978-61997 | MS.gene95037:CDS | 25.0% |
| !! | GAAGATTTCAAATTTAAAGC+TGG | - | chr8.2:63866-63885 | MS.gene95037:CDS | 25.0% |
| !! | TGATTTTGCATTTCTAATTG+TGG | - | chr8.2:64000-64019 | MS.gene95037:CDS | 25.0% |
| !!! | AAAATTGTTTTATCAAGTGG+TGG | - | chr8.2:62369-62388 | MS.gene95037:intron | 25.0% |
| !!! | AATCTTCAGTTTTGATGTTT+CGG | - | chr8.2:64537-64556 | MS.gene95037:CDS | 25.0% |
| !!! | ACAATCAATTACTTTTAGGT+TGG | + | chr8.2:63526-63545 | None:intergenic | 25.0% |
| !!! | ATGGCTTTTAAAATGCTTTA+TGG | - | chr8.2:63781-63800 | MS.gene95037:intron | 25.0% |
| !!! | CTCAGTTTAACTTGATAATA+CGG | - | chr8.2:62734-62753 | MS.gene95037:intron | 25.0% |
| !!! | GCTAACAATCAATTACTTTT+AGG | + | chr8.2:63530-63549 | None:intergenic | 25.0% |
| !!! | GTTAATTTTACTTGCTAACA+AGG | + | chr8.2:62919-62938 | None:intergenic | 25.0% |
| !!! | TATCAAAGGAGCATTTAATT+GGG | + | chr8.2:63486-63505 | None:intergenic | 25.0% |
| !!! | TCAGTTTAACTTGATAATAC+GGG | - | chr8.2:62735-62754 | MS.gene95037:intron | 25.0% |
| AAAATACCTTGTTCTCTTGT+CGG | + | chr8.2:63641-63660 | None:intergenic | 30.0% | |
| AAAATCCTTTATATGCAGGA+AGG | + | chr8.2:64154-64173 | None:intergenic | 30.0% | |
| AAATTTGTGTAGAGTAGCTT+TGG | + | chr8.2:62569-62588 | None:intergenic | 30.0% | |
| AACAGATAGTTAGTAGTGTA+TGG | + | chr8.2:64026-64045 | None:intergenic | 30.0% | |
| AAGATAATTTCAATTTGGCG+AGG | + | chr8.2:61532-61551 | None:intergenic | 30.0% | |
| AAGGTAATAAACTGAAGAGA+TGG | + | chr8.2:62110-62129 | None:intergenic | 30.0% | |
| AAGTGGAAACACCAAAATAA+GGG | + | chr8.2:63685-63704 | None:intergenic | 30.0% | |
| AATGCTTTATGGATAGTTAC+TGG | - | chr8.2:63792-63811 | MS.gene95037:intron | 30.0% | |
| ACAGATGGCATTAATGAAAT+CGG | + | chr8.2:63968-63987 | None:intergenic | 30.0% | |
| AGACGAGCTTATTATTCTAA+GGG | + | chr8.2:63751-63770 | None:intergenic | 30.0% | |
| AGATATGTTGCACTTACATT+GGG | - | chr8.2:64094-64113 | MS.gene95037:intron | 30.0% | |
| ATAGAGAGAATATGGAAGAA+AGG | + | chr8.2:63140-63159 | None:intergenic | 30.0% | |
| ATGTTTCATGTAAAAGGAGT+CGG | + | chr8.2:63330-63349 | None:intergenic | 30.0% | |
| ATTTGGCACTCATATAAGAT+TGG | - | chr8.2:62146-62165 | MS.gene95037:intron | 30.0% | |
| CAAAACAAAGAAATGTAGCA+AGG | + | chr8.2:62602-62621 | None:intergenic | 30.0% | |
| CAAATGACAAATCATTTGAC+GGG | + | chr8.2:62232-62251 | None:intergenic | 30.0% | |
| GCAAATGACAAATCATTTGA+CGG | + | chr8.2:62233-62252 | None:intergenic | 30.0% | |
| TAAGTGGAAACACCAAAATA+AGG | + | chr8.2:63686-63705 | None:intergenic | 30.0% | |
| TATGGAGCGTGTAATTATTA+GGG | + | chr8.2:61346-61365 | None:intergenic | 30.0% | |
| TGTAGTTGATTACTATGTGT+TGG | + | chr8.2:63396-63415 | None:intergenic | 30.0% | |
| TTATGGAGCGTGTAATTATT+AGG | + | chr8.2:61347-61366 | None:intergenic | 30.0% | |
| ! | AAATACCTATAGAGCATCTT+TGG | + | chr8.2:63718-63737 | None:intergenic | 30.0% |
| ! | GAAGATTTTATGTCATCTTG+TGG | + | chr8.2:64524-64543 | None:intergenic | 30.0% |
| ! | TCTTTTCAGAACAACAGTAA+AGG | - | chr8.2:61548-61567 | MS.gene95037:intron | 30.0% |
| !! | ATCAAAGGAGCATTTAATTG+GGG | + | chr8.2:63485-63504 | None:intergenic | 30.0% |
| !! | CAGTTTAACTTGATAATACG+GGG | - | chr8.2:62736-62755 | MS.gene95037:intron | 30.0% |
| !! | CTATCAAAGGAGCATTTAAT+TGG | + | chr8.2:63487-63506 | None:intergenic | 30.0% |
| !! | TACTAACTATCTGTTGCTTT+GGG | - | chr8.2:64031-64050 | MS.gene95037:intron | 30.0% |
| !!! | AGCATTTTCTTTTTTGGCTA+TGG | - | chr8.2:63547-63566 | MS.gene95037:intron | 30.0% |
| !!! | GAACAATTGTCTGCATTTTT+TGG | + | chr8.2:62876-62895 | None:intergenic | 30.0% |
| !!! | TGAGCACGTATTTTTAGAAA+AGG | + | chr8.2:62718-62737 | None:intergenic | 30.0% |
| AAAAATTCCTTGTCTGTCAG+TGG | - | chr8.2:61951-61970 | MS.gene95037:intron | 35.0% | |
| AAAAGAACATACCAATCCAG+CGG | + | chr8.2:61792-61811 | None:intergenic | 35.0% | |
| AAAATTCCTTGTCTGTCAGT+GGG | - | chr8.2:61952-61971 | MS.gene95037:intron | 35.0% | |
| AAGAAAGAAAATACAGCCTC+AGG | - | chr8.2:62512-62531 | MS.gene95037:intron | 35.0% | |
| AATAACTACTCAAGCAGCTA+AGG | + | chr8.2:62129-62148 | None:intergenic | 35.0% | |
| ACAATTGCGATTCGAACTAT+TGG | - | chr8.2:63816-63835 | MS.gene95037:intron | 35.0% | |
| AGAGTGAAGACACATATTGA+TGG | - | chr8.2:63606-63625 | MS.gene95037:intron | 35.0% | |
| AGCAGTAATATACCTTGTAG+CGG | + | chr8.2:62049-62068 | None:intergenic | 35.0% | |
| AGTTTCGTTACAAGAGAAAG+AGG | - | chr8.2:61896-61915 | MS.gene95037:intron | 35.0% | |
| ATGAAGAGAACGGAAAATTG+AGG | - | chr8.2:62659-62678 | MS.gene95037:intron | 35.0% | |
| CAATTCATCATCCTTGTAGT+GGG | + | chr8.2:62015-62034 | None:intergenic | 35.0% | |
| CAGTAAGTGTATGCTATCAA+AGG | + | chr8.2:63500-63519 | None:intergenic | 35.0% | |
| CATCTTCTCTTCATCACAAT+GGG | + | chr8.2:62786-62805 | None:intergenic | 35.0% | |
| CGTGTAATTATTAGGGTTTC+CGG | + | chr8.2:61339-61358 | None:intergenic | 35.0% | |
| GAGACGAGCTTATTATTCTA+AGG | + | chr8.2:63752-63771 | None:intergenic | 35.0% | |
| GAGATATGTTGCACTTACAT+TGG | - | chr8.2:64093-64112 | MS.gene95037:intron | 35.0% | |
| GAGTGAAGACACATATTGAT+GGG | - | chr8.2:63607-63626 | MS.gene95037:intron | 35.0% | |
| GGCATTAATGAAATCGGTTA+TGG | + | chr8.2:63962-63981 | None:intergenic | 35.0% | |
| GTTTCGGATTAAGAAGAGAT+GGG | - | chr8.2:64553-64572 | MS.gene95037:CDS | 35.0% | |
| TACTCGGAAATGACAAGATA+TGG | + | chr8.2:61427-61446 | None:intergenic | 35.0% | |
| TAGATTATGCAGTAACCAGT+TGG | + | chr8.2:63428-63447 | None:intergenic | 35.0% | |
| TAGCTGCTTGAGTAGTTATT+TGG | - | chr8.2:62129-62148 | MS.gene95037:intron | 35.0% | |
| TCAATTCATCATCCTTGTAG+TGG | + | chr8.2:62016-62035 | None:intergenic | 35.0% | |
| TCATCTTCTCTTCATCACAA+TGG | + | chr8.2:62787-62806 | None:intergenic | 35.0% | |
| TCCAATGAAGAGACAAACAA+AGG | + | chr8.2:63587-63606 | None:intergenic | 35.0% | |
| TGTTTCGGATTAAGAAGAGA+TGG | - | chr8.2:64552-64571 | MS.gene95037:CDS | 35.0% | |
| ! | ATATCTTGTCATTTCCGAGT+AGG | - | chr8.2:61426-61445 | MS.gene95037:CDS | 35.0% |
| ! | CTACTAACTATCTGTTGCTT+TGG | - | chr8.2:64030-64049 | MS.gene95037:intron | 35.0% |
| ! | TCCTTTGTTTGTCTCTTCAT+TGG | - | chr8.2:63583-63602 | MS.gene95037:intron | 35.0% |
| ! | TTGGTCTTTCTGACAAGTTA+AGG | - | chr8.2:62267-62286 | MS.gene95037:intron | 35.0% |
| !! | AAGACACATATTGATGGGTT+AGG | - | chr8.2:63612-63631 | MS.gene95037:intron | 35.0% |
| !! | ACTCATTTGAGCCCTTATTT+TGG | - | chr8.2:63671-63690 | MS.gene95037:CDS | 35.0% |
| !! | AGACACATATTGATGGGTTA+GGG | - | chr8.2:63613-63632 | MS.gene95037:intron | 35.0% |
| !! | GACAAGAGAACAAGGTATTT+TGG | - | chr8.2:63640-63659 | MS.gene95037:CDS | 35.0% |
| !! | GACAAGATATGGTTTGTTGA+CGG | + | chr8.2:61416-61435 | None:intergenic | 35.0% |
| !! | GGAAATCTGAAAGTTGCTTT+TGG | + | chr8.2:61867-61886 | None:intergenic | 35.0% |
| !!! | CTTTTTTGGCTATGGTTTGT+GGG | - | chr8.2:63555-63574 | MS.gene95037:intron | 35.0% |
| !!! | TCTTTTTTGGCTATGGTTTG+TGG | - | chr8.2:63554-63573 | MS.gene95037:intron | 35.0% |
| AAAATACAGCCTCAGGAAGT+AGG | - | chr8.2:62519-62538 | MS.gene95037:intron | 40.0% | |
| AAAATGAGACACGTACCCAA+AGG | + | chr8.2:63925-63944 | None:intergenic | 40.0% | |
| AAATGAGACACGTACCCAAA+GGG | + | chr8.2:63924-63943 | None:intergenic | 40.0% | |
| AGCTCGTCTCCTTACTAATA+TGG | - | chr8.2:63762-63781 | MS.gene95037:intron | 40.0% | |
| ATTTGACGGGAGAGAAAGTA+TGG | + | chr8.2:62219-62238 | None:intergenic | 40.0% | |
| CCATAAAATCCAATCCTCAC+CGG | - | chr8.2:61361-61380 | MS.gene95037:CDS | 40.0% | |
| GAAGTTAAGATACCGCTACA+AGG | - | chr8.2:62034-62053 | MS.gene95037:CDS | 40.0% | |
| GAGGCTGTCCAAAAATTTAC+AGG | + | chr8.2:61513-61532 | None:intergenic | 40.0% | |
| GCAACTTTCAGATTTCCTCT+AGG | - | chr8.2:61870-61889 | MS.gene95037:intron | 40.0% | |
| GTTAAGAGTTCCATTGACGT+TGG | - | chr8.2:61650-61669 | MS.gene95037:intron | 40.0% | |
| TCAACAAGGAGAGGTTACAA+TGG | - | chr8.2:61712-61731 | MS.gene95037:intron | 40.0% | |
| TCTGTCAGTGGGATTCTTAA+AGG | - | chr8.2:61963-61982 | MS.gene95037:intron | 40.0% | |
| TCTTTGGCCAAAAAGGTAAG+TGG | + | chr8.2:63702-63721 | None:intergenic | 40.0% | |
| TGATAGTTGAAGTGCATAGC+CGG | + | chr8.2:61756-61775 | None:intergenic | 40.0% | |
| TGCTTCCTTCCTGCATATAA+AGG | - | chr8.2:64146-64165 | MS.gene95037:CDS | 40.0% | |
| TGTAACGAAACTTCACCTAG+AGG | + | chr8.2:61888-61907 | None:intergenic | 40.0% | |
| TTCGATATGAAGCTGATCTG+AGG | + | chr8.2:61587-61606 | None:intergenic | 40.0% | |
| TTCGTTACAAGAGAAAGAGG+AGG | - | chr8.2:61899-61918 | MS.gene95037:intron | 40.0% | |
| TTTGGCCAAAGATGCTCTAT+AGG | - | chr8.2:63710-63729 | MS.gene95037:intron | 40.0% | |
| ! | AACTTGATAATACGGGGATG+TGG | - | chr8.2:62742-62761 | MS.gene95037:intron | 40.0% |
| ! | ACTTGATAATACGGGGATGT+GGG | - | chr8.2:62743-62762 | MS.gene95037:intron | 40.0% |
| ! | GGTGTTTCCACTTACCTTTT+TGG | - | chr8.2:63692-63711 | MS.gene95037:CDS | 40.0% |
| ! | TAAAGCTGGTTATGATTCGG+AGG | - | chr8.2:63880-63899 | MS.gene95037:CDS | 40.0% |
| ! | TAGAGCATCTTTGGCCAAAA+AGG | + | chr8.2:63709-63728 | None:intergenic | 40.0% |
| ! | TTTGACGGGAGAGAAAGTAT+GGG | + | chr8.2:62218-62237 | None:intergenic | 40.0% |
| !! | AACTCTTAACTAGAGCACTG+TGG | + | chr8.2:61640-61659 | None:intergenic | 40.0% |
| !! | AAGATATGGTTTGTTGACGG+CGG | + | chr8.2:61413-61432 | None:intergenic | 40.0% |
| !! | TAACTATCTGTTGCTTTGGG+TGG | - | chr8.2:64034-64053 | MS.gene95037:intron | 40.0% |
| !! | TCAACAGGAGTATTCACAGA+TGG | + | chr8.2:63983-64002 | None:intergenic | 40.0% |
| !! | TGTGTAGAGTAGCTTTGGAT+GGG | + | chr8.2:62564-62583 | None:intergenic | 40.0% |
| !! | TTGTGTAGAGTAGCTTTGGA+TGG | + | chr8.2:62565-62584 | None:intergenic | 40.0% |
| AAGAATCCCACTGACAGACA+AGG | + | chr8.2:61961-61980 | None:intergenic | 45.0% | |
| AAGACCAAACCTACGCTTGA+AGG | + | chr8.2:62255-62274 | None:intergenic | 45.0% | |
| ACTACAATGCAAGCACCAAC+TGG | - | chr8.2:63410-63429 | MS.gene95037:intron | 45.0% | |
| AGCACCAGTGAGTTTGAATC+TGG | + | chr8.2:61678-61697 | None:intergenic | 45.0% | |
| ATAGTTGAAGTGCATAGCCG+GGG | + | chr8.2:61754-61773 | None:intergenic | 45.0% | |
| CATGATGTCAAGGCTCAACA+AGG | - | chr8.2:61698-61717 | MS.gene95037:intron | 45.0% | |
| GATAGTTGAAGTGCATAGCC+GGG | + | chr8.2:61755-61774 | None:intergenic | 45.0% | |
| GCACCAGTGAGTTTGAATCT+GGG | + | chr8.2:61677-61696 | None:intergenic | 45.0% | |
| GCTGTCTACAAGCATACCTA+TGG | - | chr8.2:63842-63861 | MS.gene95037:intron | 45.0% | |
| TAAAATCCAATCCTCACCGG+CGG | - | chr8.2:61364-61383 | MS.gene95037:CDS | 45.0% | |
| TTGTTCCTACCTACTTCCTG+AGG | + | chr8.2:62531-62550 | None:intergenic | 45.0% | |
| TTTGCCTTCAAGCGTAGGTT+TGG | - | chr8.2:62248-62267 | MS.gene95037:intron | 45.0% | |
| ! | CACATTAGCTTCCTTCAGGT+TGG | - | chr8.2:64434-64453 | MS.gene95037:CDS | 45.0% |
| ! | CCGGTGAGGATTGGATTTTA+TGG | + | chr8.2:61364-61383 | None:intergenic | 45.0% |
| ! | CTTGATAATACGGGGATGTG+GGG | - | chr8.2:62744-62763 | MS.gene95037:intron | 45.0% |
| ! | GAACTCGGTGGTAATTCTGA+GGG | + | chr8.2:61456-61475 | None:intergenic | 45.0% |
| ! | GTGACACATTAGCTTCCTTC+AGG | - | chr8.2:64430-64449 | MS.gene95037:CDS | 45.0% |
| ! | TATGAAGCTGATCTGAGGCT+CGG | + | chr8.2:61582-61601 | None:intergenic | 45.0% |
| ! | TGTCATTTGCCTTCAAGCGT+AGG | - | chr8.2:62243-62262 | MS.gene95037:intron | 45.0% |
| !! | TTCAGGTTGGTGATGAAGGT+GGG | - | chr8.2:64447-64466 | MS.gene95037:CDS | 45.0% |
| !! | TTCCTTCAGGTTGGTGATGA+AGG | - | chr8.2:64443-64462 | MS.gene95037:CDS | 45.0% |
| CACCTTCATCACCAACCTGA+AGG | + | chr8.2:64448-64467 | None:intergenic | 50.0% | |
| CACTGGTGCTCATGATGTCA+AGG | - | chr8.2:61688-61707 | MS.gene95037:intron | 50.0% | |
| GAACATACCAATCCAGCGGA+TGG | + | chr8.2:61788-61807 | None:intergenic | 50.0% | |
| GGTCCCAGATTCAAACTCAC+TGG | - | chr8.2:61671-61690 | MS.gene95037:intron | 50.0% | |
| GTTGCTAATATCGCTGACCC+CGG | - | chr8.2:61734-61753 | MS.gene95037:intron | 50.0% | |
| TACAGCCTCAGGAAGTAGGT+AGG | - | chr8.2:62523-62542 | MS.gene95037:intron | 50.0% | |
| TGTCAAGGCTCAACAAGGAG+AGG | - | chr8.2:61703-61722 | MS.gene95037:intron | 50.0% | |
| TGTGGTCTTCAAGGTCGTAG+TGG | + | chr8.2:61622-61641 | None:intergenic | 50.0% | |
| ! | CGAACTCGGTGGTAATTCTG+AGG | + | chr8.2:61457-61476 | None:intergenic | 50.0% |
| ! | GAATCTGGGACCAACGTCAA+TGG | + | chr8.2:61663-61682 | None:intergenic | 50.0% |
| ! | TATGATTCGGAGGTTCGCCT+TGG | - | chr8.2:63890-63909 | MS.gene95037:CDS | 50.0% |
| !! | ATATGGTTTGTTGACGGCGG+CGG | + | chr8.2:61410-61429 | None:intergenic | 50.0% |
| !! | CTAGAGCACTGTGGTCTTCA+AGG | + | chr8.2:61631-61650 | None:intergenic | 50.0% |
| !! | CTTCAGGTTGGTGATGAAGG+TGG | - | chr8.2:64446-64465 | MS.gene95037:CDS | 50.0% |
| ACCAATCCAGCGGATGGAAG+TGG | + | chr8.2:61782-61801 | None:intergenic | 55.0% | |
| AGAGAAAGAGGAGGAGCAGC+AGG | - | chr8.2:61908-61927 | MS.gene95037:intron | 55.0% | |
| GGTCTTCAAGGTCGTAGTGG+AGG | + | chr8.2:61619-61638 | None:intergenic | 55.0% | |
| TGCGCTTTCGCTGTCGAACT+CGG | + | chr8.2:61471-61490 | None:intergenic | 55.0% | |
| TGTCTGCACTGCCCACTACA+AGG | - | chr8.2:62001-62020 | MS.gene95037:CDS | 55.0% | |
| ! | ATTCTGAGGGCAGGCCTACT+CGG | + | chr8.2:61443-61462 | None:intergenic | 55.0% |
| ! | CAAGGTCGTAGTGGAGGCTA+AGG | + | chr8.2:61613-61632 | None:intergenic | 55.0% |
| ! | TCGGTGGTAATTCTGAGGGC+AGG | + | chr8.2:61452-61471 | None:intergenic | 55.0% |
| !! | AGGGCACCGACAAGAGAACA+AGG | - | chr8.2:63632-63651 | MS.gene95037:CDS | 55.0% |
| AGGATCAACTACCGCCGGTG+AGG | + | chr8.2:61378-61397 | None:intergenic | 60.0% | |
| ATTCGGAGGTTCGCCTTGGC+TGG | - | chr8.2:63894-63913 | MS.gene95037:CDS | 60.0% | |
| CAACTACCGCCGGTGAGGAT+TGG | + | chr8.2:61373-61392 | None:intergenic | 60.0% | |
| CCTTGGCTGGGCATCCCTTT+GGG | - | chr8.2:63907-63926 | MS.gene95037:CDS | 60.0% | |
| GAAAGAGGAGGAGCAGCAGG+AGG | - | chr8.2:61911-61930 | MS.gene95037:intron | 60.0% | |
| GCCACTTCCATCCGCTGGAT+TGG | - | chr8.2:61778-61797 | MS.gene95037:intron | 60.0% | |
| GCTTTCGCTGTCGAACTCGG+TGG | + | chr8.2:61468-61487 | None:intergenic | 60.0% | |
| GGCAGAGGATCAACTACCGC+CGG | + | chr8.2:61383-61402 | None:intergenic | 60.0% | |
| TCAACGCCACTTCCATCCGC+TGG | - | chr8.2:61773-61792 | MS.gene95037:intron | 60.0% | |
| TTCGGAGGTTCGCCTTGGCT+GGG | - | chr8.2:63895-63914 | MS.gene95037:CDS | 60.0% | |
| AGAGGAGGAGCAGCAGGAGG+AGG | - | chr8.2:61914-61933 | MS.gene95037:intron | 65.0% | |
| CCCAAAGGGATGCCCAGCCA+AGG | + | chr8.2:63910-63929 | None:intergenic | 65.0% | |
| GCCTTGGCTGGGCATCCCTT+TGG | - | chr8.2:63906-63925 | MS.gene95037:CDS | 65.0% | |
| !! | TGGTTTGTTGACGGCGGCGG+CGG | + | chr8.2:61407-61426 | None:intergenic | 65.0% |
| TTTGTTGACGGCGGCGGCGG+CGG | + | chr8.2:61404-61423 | None:intergenic | 70.0% | |
| ! | GACGGCGGCGGCGGCGGCAG+AGG | + | chr8.2:61398-61417 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 61323 | 64583 | 61323 | ID=MS.gene95037 |
| chr8.2 | mRNA | 61323 | 64583 | 61323 | ID=MS.gene95037.t1;Parent=MS.gene95037 |
| chr8.2 | exon | 64107 | 64583 | 64107 | ID=MS.gene95037.t1.exon1;Parent=MS.gene95037.t1 |
| chr8.2 | CDS | 64107 | 64583 | 64107 | ID=cds.MS.gene95037.t1;Parent=MS.gene95037.t1 |
| chr8.2 | exon | 63851 | 64042 | 63851 | ID=MS.gene95037.t1.exon2;Parent=MS.gene95037.t1 |
| chr8.2 | CDS | 63851 | 64042 | 63851 | ID=cds.MS.gene95037.t1;Parent=MS.gene95037.t1 |
| chr8.2 | exon | 63618 | 63712 | 63618 | ID=MS.gene95037.t1.exon3;Parent=MS.gene95037.t1 |
| chr8.2 | CDS | 63618 | 63712 | 63618 | ID=cds.MS.gene95037.t1;Parent=MS.gene95037.t1 |
| chr8.2 | exon | 61978 | 62098 | 61978 | ID=MS.gene95037.t1.exon4;Parent=MS.gene95037.t1 |
| chr8.2 | CDS | 61978 | 62098 | 61978 | ID=cds.MS.gene95037.t1;Parent=MS.gene95037.t1 |
| chr8.2 | exon | 61323 | 61454 | 61323 | ID=MS.gene95037.t1.exon5;Parent=MS.gene95037.t1 |
| chr8.2 | CDS | 61323 | 61454 | 61323 | ID=cds.MS.gene95037.t1;Parent=MS.gene95037.t1 |
| Gene Sequence |
| Protein sequence |
