Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73461.t1 | XP_003592576.3 | 96.6 | 297 | 7 | 1 | 1 | 297 | 1 | 294 | 1.70E-156 | 562 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73461.t1 | P43394 | 50.7 | 278 | 128 | 3 | 26 | 294 | 36 | 313 | 1.7e-72 | 274.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73461.t1 | A0A396JYK0 | 96.6 | 297 | 7 | 1 | 1 | 297 | 1 | 294 | 1.2e-156 | 562.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene73461 | 0.827 | 1.99E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene73461 | 0.819744 | 9.89E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene73461 | 0.847398 | 1.19E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene73461 | 0.862499 | 4.85E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene73461 | 0.841957 | 3.47E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene73461 | 0.861409 | 1.05E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene73461 | 0.862382 | 5.27E-64 | -1.69E-46 |
| MS.gene049627 | MS.gene73461 | 0.828414 | 9.11E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene73461 | 0.827347 | 1.64E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene73461 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene05010 | MS.gene73461 | 0.838035 | 3.65E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene73461 | 0.872242 | 3.70E-67 | -1.69E-46 |
| MS.gene050165 | MS.gene73461 | 0.899018 | 3.00E-77 | -1.69E-46 |
| MS.gene050170 | MS.gene73461 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene73461 | 0.816912 | 4.33E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene73461 | 0.827475 | 1.53E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene73461 | 0.884484 | 1.84E-71 | -1.69E-46 |
| MS.gene050444 | MS.gene73461 | 0.808469 | 3.05E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene73461 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene73461 | 0.867363 | 1.45E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene73461 | 0.900804 | 5.08E-78 | -1.69E-46 |
| MS.gene050577 | MS.gene73461 | 0.823051 | 1.71E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene73461 | 0.873343 | 1.58E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene73461 | 0.835907 | 1.28E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene73461 | 0.836022 | 1.19E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene73461 | 0.817412 | 3.34E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene73461 | 0.8184 | 2.00E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene73461 | 0.814529 | 1.47E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene73461 | 0.909635 | 4.58E-82 | -1.69E-46 |
| MS.gene05087 | MS.gene73461 | 0.888721 | 4.59E-73 | -1.69E-46 |
| MS.gene050904 | MS.gene73461 | 0.888355 | 6.35E-73 | -1.69E-46 |
| MS.gene050986 | MS.gene73461 | 0.844439 | 7.55E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene73461 | 0.818281 | 2.13E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene73461 | 0.855213 | 7.34E-62 | -1.69E-46 |
| MS.gene051366 | MS.gene73461 | -0.810228 | 1.28E-50 | -1.69E-46 |
| MS.gene051367 | MS.gene73461 | -0.824255 | 8.91E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene73461 | 0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene73461 | 0.823366 | 1.44E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene73461 | 0.802226 | 6.20E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene73461 | 0.834026 | 3.80E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene73461 | 0.833191 | 6.14E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene73461 | 0.841022 | 6.11E-58 | -1.69E-46 |
| MS.gene052916 | MS.gene73461 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene73461 | 0.809249 | 2.08E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene73461 | 0.809015 | 2.33E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene73461 | 0.807399 | 5.15E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene73461 | 0.83032 | 3.14E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene73461 | 0.809264 | 2.06E-50 | -1.69E-46 |
| MS.gene054638 | MS.gene73461 | 0.858125 | 1.02E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene73461 | 0.842454 | 2.56E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene73461 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene73461 | 0.865614 | 5.20E-65 | -1.69E-46 |
| MS.gene055204 | MS.gene73461 | -0.813361 | 2.66E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene73461 | 0.843193 | 1.63E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene73461 | 0.844198 | 8.77E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene73461 | 0.824933 | 6.17E-54 | -1.69E-46 |
| MS.gene055634 | MS.gene73461 | 0.922878 | 5.54E-89 | -1.69E-46 |
| MS.gene055636 | MS.gene73461 | 0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene055638 | MS.gene73461 | 0.86705 | 1.82E-65 | -1.69E-46 |
| MS.gene055748 | MS.gene73461 | 0.839326 | 1.69E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene73461 | 0.850729 | 1.41E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene73461 | 0.862587 | 4.56E-64 | -1.69E-46 |
| MS.gene055776 | MS.gene73461 | 0.865184 | 7.10E-65 | -1.69E-46 |
| MS.gene055849 | MS.gene73461 | 0.904068 | 1.80E-79 | -1.69E-46 |
| MS.gene05589 | MS.gene73461 | 0.818956 | 1.49E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene73461 | 0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene73461 | 0.858758 | 6.61E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene73461 | 0.851791 | 7.05E-61 | -1.69E-46 |
| MS.gene056549 | MS.gene73461 | 0.860926 | 1.47E-63 | -1.69E-46 |
| MS.gene056618 | MS.gene73461 | -0.81281 | 3.51E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene73461 | 0.862782 | 3.97E-64 | -1.69E-46 |
| MS.gene056692 | MS.gene73461 | 0.833724 | 4.52E-56 | -1.69E-46 |
| MS.gene056898 | MS.gene73461 | 0.810483 | 1.13E-50 | -1.69E-46 |
| MS.gene056910 | MS.gene73461 | 0.807973 | 3.89E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene73461 | 0.804644 | 1.96E-49 | -1.69E-46 |
| MS.gene057684 | MS.gene73461 | 0.847534 | 1.09E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene73461 | 0.829957 | 3.85E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene73461 | 0.825614 | 4.26E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene73461 | 0.846599 | 1.96E-59 | -1.69E-46 |
| MS.gene058335 | MS.gene73461 | 0.856475 | 3.14E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene73461 | 0.856502 | 3.08E-62 | -1.69E-46 |
| MS.gene058719 | MS.gene73461 | 0.873194 | 1.78E-67 | -1.69E-46 |
| MS.gene058773 | MS.gene73461 | 0.856021 | 4.26E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene73461 | 0.857887 | 1.20E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene73461 | 0.814134 | 1.80E-51 | -1.69E-46 |
| MS.gene059026 | MS.gene73461 | 0.837713 | 4.42E-57 | -1.69E-46 |
| MS.gene059029 | MS.gene73461 | 0.809585 | 1.76E-50 | -1.69E-46 |
| MS.gene059079 | MS.gene73461 | 0.881981 | 1.53E-70 | -1.69E-46 |
| MS.gene05912 | MS.gene73461 | 0.862239 | 5.83E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene73461 | 0.871334 | 7.40E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene73461 | 0.814952 | 1.19E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene73461 | 0.814155 | 1.78E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene73461 | 0.859918 | 2.97E-63 | -1.69E-46 |
| MS.gene060526 | MS.gene73461 | 0.82974 | 4.35E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene73461 | -0.825998 | 3.45E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene73461 | 0.89282 | 1.12E-74 | -1.69E-46 |
| MS.gene060762 | MS.gene73461 | 0.862263 | 5.73E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene73461 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene06077 | MS.gene73461 | 0.840962 | 6.34E-58 | -1.69E-46 |
| MS.gene060823 | MS.gene73461 | -0.835907 | 1.28E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene73461 | 0.848059 | 7.80E-60 | -1.69E-46 |
| MS.gene061134 | MS.gene73461 | 0.816427 | 5.56E-52 | -1.69E-46 |
| MS.gene061171 | MS.gene73461 | 0.81185 | 5.70E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73461.t1 | MTR_1g108710 | 98.155 | 271 | 5 | 0 | 27 | 297 | 1 | 271 | 0.0 | 543 |
| MS.gene73461.t1 | MTR_1g108710 | 96.390 | 277 | 7 | 1 | 1 | 277 | 1 | 274 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73461.t1 | AT1G15140 | 70.732 | 287 | 77 | 3 | 16 | 297 | 11 | 295 | 2.10e-142 | 403 |
| MS.gene73461.t1 | AT1G15140 | 69.583 | 240 | 66 | 3 | 16 | 250 | 11 | 248 | 1.30e-113 | 329 |
| MS.gene73461.t1 | AT1G15140 | 69.583 | 240 | 66 | 3 | 16 | 250 | 11 | 248 | 1.30e-113 | 329 |
Find 106 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCATTCTCTTCAGGTTTC+TGG | 0.108389 | 1.4:+83399999 | None:intergenic |
| ATCGACCCACCCGAGAAATT+TGG | 0.234673 | 1.4:-83402272 | MS.gene73461:CDS |
| CCTGAAGAGAATGGCTTATC+AGG | 0.258718 | 1.4:-83399992 | MS.gene73461:intron |
| TGTTGAGCTTAGTCCGGTTA+TGG | 0.301742 | 1.4:-83402318 | MS.gene73461:CDS |
| CCTGATAAGCCATTCTCTTC+AGG | 0.302056 | 1.4:+83399992 | None:intergenic |
| TTGCCACTGGATCCGGAATT+AGG | 0.330537 | 1.4:-83402235 | MS.gene73461:intron |
| GTGTGAGACGTGGCAAGGTC+AGG | 0.331915 | 1.4:+83402512 | None:intergenic |
| CTTGTCTTTGCCACTGGATC+CGG | 0.337767 | 1.4:-83402242 | MS.gene73461:CDS |
| GTTGAGCTTAGTCCGGTTAT+GGG | 0.374160 | 1.4:-83402317 | MS.gene73461:CDS |
| CTTAGTCCGGTTATGGGGAA+TGG | 0.384177 | 1.4:-83402311 | MS.gene73461:CDS |
| TTATCCAACCCTTTGTCAAC+TGG | 0.387952 | 1.4:-83399664 | MS.gene73461:CDS |
| ACTGTTCTTGTCTTTGCCAC+TGG | 0.391138 | 1.4:-83402248 | MS.gene73461:CDS |
| TATAGGAGAGATTTAAAGAC+TGG | 0.394111 | 1.4:-83399872 | MS.gene73461:intron |
| ATTCGGTCACTTATTGAGTC+AGG | 0.405073 | 1.4:-83400066 | MS.gene73461:CDS |
| GGCTAAAGTGCGCATGGGAG+TGG | 0.410046 | 1.4:+83402726 | None:intergenic |
| TCAACTGGTGCTGTACTTTG+TGG | 0.414186 | 1.4:-83399649 | MS.gene73461:CDS |
| TTTAAAGACTGGGAATCTTC+CGG | 0.416173 | 1.4:-83399861 | MS.gene73461:CDS |
| CGTTGTGTGGGTTGAAGAAA+GGG | 0.418149 | 1.4:-83402346 | MS.gene73461:CDS |
| GCGTTGTGTGGGTTGAAGAA+AGG | 0.428547 | 1.4:-83402347 | MS.gene73461:CDS |
| CGTAGGATGGACATGGGAAA+GGG | 0.429123 | 1.4:+83402698 | None:intergenic |
| GGCAGAAACTGACCTAATTC+CGG | 0.434711 | 1.4:+83402223 | None:intergenic |
| TCGATCTCGGAGAGAGGAGC+TGG | 0.438598 | 1.4:+83402584 | None:intergenic |
| ACATCTATTCTTGTTGCTGA+TGG | 0.438700 | 1.4:-83398580 | MS.gene73461:CDS |
| TCAAACCCATTCCCCATAAC+CGG | 0.441227 | 1.4:+83402305 | None:intergenic |
| CAACTGGTGCTGTACTTTGT+GGG | 0.442180 | 1.4:-83399648 | MS.gene73461:CDS |
| TTGACGTACGGCGGCGGAAA+GGG | 0.449809 | 1.4:+83402625 | None:intergenic |
| GACTCAATAAGTGACCGAAT+TGG | 0.449902 | 1.4:+83400069 | None:intergenic |
| CTTGACGTACGGCGGCGGAA+AGG | 0.459299 | 1.4:+83402624 | None:intergenic |
| TGACGGAGACGGTGGTTGGT+GGG | 0.462815 | 1.4:+83402659 | None:intergenic |
| TCTCCAGTCCAACTATCATC+TGG | 0.464149 | 1.4:+83399810 | None:intergenic |
| GCGTAGGATGGACATGGGAA+AGG | 0.470876 | 1.4:+83402697 | None:intergenic |
| GTGACGGAGACGGTGGTTGG+TGG | 0.471139 | 1.4:+83402658 | None:intergenic |
| ATAGCAAGAAACGACGGTTT+CGG | 0.475246 | 1.4:+83402449 | None:intergenic |
| TACGTCAAGACACCACCGTC+TGG | 0.479107 | 1.4:-83402610 | MS.gene73461:CDS |
| GTAGGATGGACATGGGAAAG+GGG | 0.482435 | 1.4:+83402699 | None:intergenic |
| TGTGAGACGTGGCAAGGTCA+GGG | 0.483409 | 1.4:+83402513 | None:intergenic |
| TTAGTCCGGTTATGGGGAAT+GGG | 0.485622 | 1.4:-83402310 | MS.gene73461:CDS |
| CGTGGCAAGGTCAGGGGCGT+CGG | 0.495943 | 1.4:+83402520 | None:intergenic |
| GGATGTTGTTGAGCTTAGTC+CGG | 0.502498 | 1.4:-83402324 | MS.gene73461:CDS |
| TAGGATGGACATGGGAAAGG+GGG | 0.503705 | 1.4:+83402700 | None:intergenic |
| AAGAACAGTTCCAAATTTCT+CGG | 0.503898 | 1.4:+83402262 | None:intergenic |
| TGTCTCAACCAGATGATAGT+TGG | 0.504609 | 1.4:-83399818 | MS.gene73461:CDS |
| GACGGAGACGGTGGTTGGTG+GGG | 0.509831 | 1.4:+83402660 | None:intergenic |
| TTATTGTGTGCAGTCCAATT+CGG | 0.511671 | 1.4:-83400083 | MS.gene73461:intron |
| TGGAGAAAGTGGCTTTGTAC+AGG | 0.512190 | 1.4:-83399793 | MS.gene73461:intron |
| CAACCAGATGATAGTTGGAC+TGG | 0.517272 | 1.4:-83399813 | MS.gene73461:CDS |
| ATTGAGTCAGGATTTGATGC+TGG | 0.518551 | 1.4:-83400054 | MS.gene73461:CDS |
| AGAACAGTTCCAAATTTCTC+GGG | 0.523438 | 1.4:+83402263 | None:intergenic |
| GGGTGGGGCTAAAGTGCGCA+TGG | 0.524410 | 1.4:+83402720 | None:intergenic |
| GGTTTAGATTGAAGCGGCGT+AGG | 0.525093 | 1.4:+83402681 | None:intergenic |
| TAAAGTGCGCATGGGAGTGG+AGG | 0.532726 | 1.4:+83402729 | None:intergenic |
| GACGGTGGTGTCTTGACGTA+CGG | 0.543425 | 1.4:+83402613 | None:intergenic |
| GATAGTTGGACTGGAGAAAG+TGG | 0.543932 | 1.4:-83399804 | MS.gene73461:CDS |
| GGTGTCTTGACGTACGGCGG+CGG | 0.544339 | 1.4:+83402619 | None:intergenic |
| TCCACTGCAGAAGCGTTGTG+TGG | 0.545176 | 1.4:-83402359 | MS.gene73461:CDS |
| TAGATTGAAGCGGCGTAGGA+TGG | 0.550133 | 1.4:+83402685 | None:intergenic |
| AAAGGGTTGCGAGTCGGTGA+CGG | 0.551990 | 1.4:+83402642 | None:intergenic |
| GGCCAGAAACCTGAAGAGAA+TGG | 0.557359 | 1.4:-83400001 | MS.gene73461:CDS |
| TTGCGAGTCGGTGACGGAGA+CGG | 0.557465 | 1.4:+83402648 | None:intergenic |
| AGGGGCGTCGGAAACGTCGA+TGG | 0.558624 | 1.4:+83402532 | None:intergenic |
| ACAGTTCCAAATTTCTCGGG+TGG | 0.560614 | 1.4:+83402266 | None:intergenic |
| GGAATGGGTTTGATATTAGT+CGG | 0.561988 | 1.4:-83402295 | MS.gene73461:CDS |
| CTCAGCGGCAGGTTCGATCT+CGG | 0.562464 | 1.4:+83402571 | None:intergenic |
| CGCGTGTGTGAGACGTGGCA+AGG | 0.563503 | 1.4:+83402507 | None:intergenic |
| TCGGTGACGGAGACGGTGGT+TGG | 0.563811 | 1.4:+83402655 | None:intergenic |
| CTCTTAATCGCAAGCTTCGG+CGG | 0.564323 | 1.4:+83402419 | None:intergenic |
| TGGAAGAGTGACTCAGCGGC+AGG | 0.570715 | 1.4:+83402560 | None:intergenic |
| GTACAGCACCAGTTGACAAA+GGG | 0.571677 | 1.4:+83399656 | None:intergenic |
| GAGAGGAGCTGGAGTCCAGA+CGG | 0.574346 | 1.4:+83402595 | None:intergenic |
| GGTGGGGCTAAAGTGCGCAT+GGG | 0.577657 | 1.4:+83402721 | None:intergenic |
| TCATCTGGTTGAGACAATAC+AGG | 0.579533 | 1.4:+83399825 | None:intergenic |
| GATGAGGCGGTGTTAATGAA+AGG | 0.579943 | 1.4:+83402759 | None:intergenic |
| TTGAGCTTAGTCCGGTTATG+GGG | 0.580245 | 1.4:-83402316 | MS.gene73461:CDS |
| CAGTTCCAAATTTCTCGGGT+GGG | 0.584521 | 1.4:+83402267 | None:intergenic |
| CCACTCTTAATCGCAAGCTT+CGG | 0.586640 | 1.4:+83402416 | None:intergenic |
| GTGAGACGTGGCAAGGTCAG+GGG | 0.594184 | 1.4:+83402514 | None:intergenic |
| CCCACACAACGCTTCTGCAG+TGG | 0.596333 | 1.4:+83402358 | None:intergenic |
| TGGTGGGGTTTAGATTGAAG+CGG | 0.600108 | 1.4:+83402675 | None:intergenic |
| GAAGCGGCGTAGGATGGACA+TGG | 0.600277 | 1.4:+83402691 | None:intergenic |
| AGCACCAGTTGACAAAGGGT+TGG | 0.602600 | 1.4:+83399660 | None:intergenic |
| AGTACAGCACCAGTTGACAA+AGG | 0.607829 | 1.4:+83399655 | None:intergenic |
| GCAGGTTCGATCTCGGAGAG+AGG | 0.610044 | 1.4:+83402578 | None:intergenic |
| CCGAAGCTTGCGATTAAGAG+TGG | 0.610290 | 1.4:-83402416 | MS.gene73461:CDS |
| CCACTGCAGAAGCGTTGTGT+GGG | 0.619285 | 1.4:-83402358 | MS.gene73461:CDS |
| AGGAGCTGGAGTCCAGACGG+TGG | 0.619490 | 1.4:+83402598 | None:intergenic |
| CAGTATCTTCAGCTTAAAGT+CGG | 0.619863 | 1.4:-83402479 | MS.gene73461:CDS |
| GCCACGTCTCACACACGCGC+CGG | 0.620260 | 1.4:-83402503 | MS.gene73461:CDS |
| CGGCGGAAAGGGTTGCGAGT+CGG | 0.621174 | 1.4:+83402636 | None:intergenic |
| CAGGATTTGATGCTGGCAAG+AGG | 0.625026 | 1.4:-83400047 | MS.gene73461:CDS |
| AAAGTGCGCATGGGAGTGGA+GGG | 0.625677 | 1.4:+83402730 | None:intergenic |
| TGACCTAATTCCGGATCCAG+TGG | 0.627958 | 1.4:+83402232 | None:intergenic |
| GAGTGGAGGGTAAGACGATG+AGG | 0.633278 | 1.4:+83402743 | None:intergenic |
| ATAGGAGAGATTTAAAGACT+GGG | 0.643444 | 1.4:-83399871 | MS.gene73461:intron |
| TTTAAGCTGAAGATACTGAC+CGG | 0.649623 | 1.4:+83402484 | None:intergenic |
| CGGAAACGTCGATGGAAACG+TGG | 0.650313 | 1.4:+83402540 | None:intergenic |
| GGCTGCATATACGAGAGCAA+AGG | 0.651480 | 1.4:-83399689 | MS.gene73461:CDS |
| TACAGGTACAATCTTGACAC+CGG | 0.656089 | 1.4:+83399842 | None:intergenic |
| CGAGTCGGTGACGGAGACGG+TGG | 0.672480 | 1.4:+83402651 | None:intergenic |
| GTTGTGTGGGTTGAAGAAAG+GGG | 0.680851 | 1.4:-83402345 | MS.gene73461:CDS |
| AAGCGGCGTAGGATGGACAT+GGG | 0.692247 | 1.4:+83402692 | None:intergenic |
| ACCGGCGCGTGTGTGAGACG+TGG | 0.704486 | 1.4:+83402502 | None:intergenic |
| TGGAGGGTAAGACGATGAGG+CGG | 0.709915 | 1.4:+83402746 | None:intergenic |
| GGTGGTGTCTTGACGTACGG+CGG | 0.712276 | 1.4:+83402616 | None:intergenic |
| AACGTGGAAGAGTGACTCAG+CGG | 0.719906 | 1.4:+83402556 | None:intergenic |
| GAAGCGATAGCAAGAAACGA+CGG | 0.765356 | 1.4:+83402443 | None:intergenic |
| TGGGCAGAAACAGATGACTG+AGG | 0.793337 | 1.4:-83399629 | MS.gene73461:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+CGG | - | chr1.4:83399835-83399854 | MS.gene73461:CDS | 0.0% |
| !!! | CAAATTAAATATTATGATTT+TGG | - | chr1.4:83400002-83400021 | MS.gene73461:CDS | 10.0% |
| !!! | TAAAATTTAAAACAATCAAA+AGG | - | chr1.4:83401951-83401970 | MS.gene73461:intron | 10.0% |
| !! | AAAAGAATTGTATACTTAAT+AGG | + | chr1.4:83400698-83400717 | None:intergenic | 15.0% |
| !! | AAAGAATTGTATACTTAATA+GGG | + | chr1.4:83400697-83400716 | None:intergenic | 15.0% |
| !! | AACTACATTATTCAAAAATA+GGG | - | chr1.4:83402113-83402132 | MS.gene73461:intron | 15.0% |
| !! | ATAATAACATTGATATTGAA+AGG | + | chr1.4:83402702-83402721 | None:intergenic | 15.0% |
| !! | ATATATCAATAAAAGAACAA+AGG | + | chr1.4:83402521-83402540 | None:intergenic | 15.0% |
| !! | CACTAATAATACATATATAT+AGG | + | chr1.4:83399494-83399513 | None:intergenic | 15.0% |
| !!! | ACAATTTTCTTTTATGTTAT+AGG | - | chr1.4:83401424-83401443 | MS.gene73461:intron | 15.0% |
| !!! | ATTAAATATTATGATTTTGG+TGG | - | chr1.4:83400005-83400024 | MS.gene73461:CDS | 15.0% |
| !!! | TTATACACTTCATTTTTTTT+TGG | + | chr1.4:83399923-83399942 | None:intergenic | 15.0% |
| !!! | TTATTTTCCAAAATTTGATT+TGG | - | chr1.4:83399149-83399168 | MS.gene73461:intron | 15.0% |
| !! | AAACAATGAATTCAAAGAAA+AGG | + | chr1.4:83400992-83401011 | None:intergenic | 20.0% |
| !! | AACATCGAATCAATATATTT+AGG | - | chr1.4:83400435-83400454 | MS.gene73461:intron | 20.0% |
| !! | AATATCAATGTTATTATTGC+AGG | - | chr1.4:83402705-83402724 | MS.gene73461:CDS | 20.0% |
| !! | ACAATATTATCCTTAGAAAA+AGG | + | chr1.4:83400964-83400983 | None:intergenic | 20.0% |
| !! | ACATCGAATCAATATATTTA+GGG | - | chr1.4:83400436-83400455 | MS.gene73461:intron | 20.0% |
| !! | CAAAAATATCTATATTCGAA+AGG | + | chr1.4:83400831-83400850 | None:intergenic | 20.0% |
| !! | CAACTACATTATTCAAAAAT+AGG | - | chr1.4:83402112-83402131 | MS.gene73461:intron | 20.0% |
| !! | TTAATACTGACAATTATACA+AGG | + | chr1.4:83399277-83399296 | None:intergenic | 20.0% |
| !! | TTGTATAATTGTCAGTATTA+AGG | - | chr1.4:83399276-83399295 | MS.gene73461:intron | 20.0% |
| !!! | ACGCGAAATTTTTAAAATTT+AGG | + | chr1.4:83400320-83400339 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTCACTTATATCA+TGG | - | chr1.4:83400710-83400729 | MS.gene73461:intron | 20.0% |
| !!! | CTTTCGAATATAGATATTTT+TGG | - | chr1.4:83400829-83400848 | MS.gene73461:intron | 20.0% |
| !!! | TCTATTTTCATTCATATGTT+AGG | + | chr1.4:83400118-83400137 | None:intergenic | 20.0% |
| !!! | TTAAAATTTAGGATACGATA+TGG | + | chr1.4:83400309-83400328 | None:intergenic | 20.0% |
| ! | AATGTGAAAAACACTTTGAA+TGG | - | chr1.4:83401075-83401094 | MS.gene73461:intron | 25.0% |
| ! | ACTAAGAAGCTATTAACAAT+TGG | - | chr1.4:83399554-83399573 | MS.gene73461:intron | 25.0% |
| ! | AGAATATCATGACAAATATC+AGG | - | chr1.4:83402445-83402464 | MS.gene73461:CDS | 25.0% |
| ! | AGAGAGTAAAGAGAAAATAT+TGG | + | chr1.4:83401184-83401203 | None:intergenic | 25.0% |
| ! | AGGAAAATGATGATCAATAA+TGG | + | chr1.4:83400563-83400582 | None:intergenic | 25.0% |
| ! | ATAATGTCTTGGATTTGTAA+AGG | + | chr1.4:83402203-83402222 | None:intergenic | 25.0% |
| ! | ATAATTAATTCCGATACTTC+TGG | + | chr1.4:83399811-83399830 | None:intergenic | 25.0% |
| ! | GGAAAATGATGATCAATAAT+GGG | + | chr1.4:83400562-83400581 | None:intergenic | 25.0% |
| ! | TAATTAATTCCGATACTTCT+GGG | + | chr1.4:83399810-83399829 | None:intergenic | 25.0% |
| ! | TCTTTACTCTCTTTGATATT+GGG | - | chr1.4:83401192-83401211 | MS.gene73461:intron | 25.0% |
| ! | TGTTGCAGATATTAAGATTA+TGG | - | chr1.4:83399446-83399465 | MS.gene73461:intron | 25.0% |
| ! | TTGTTATGATCTAGTAAAGT+AGG | - | chr1.4:83399359-83399378 | MS.gene73461:intron | 25.0% |
| !! | ATCAACACCAAATCAAATTT+TGG | + | chr1.4:83399159-83399178 | None:intergenic | 25.0% |
| !! | ATTCTTTGTTCCTTTTTCTA+AGG | - | chr1.4:83400951-83400970 | MS.gene73461:intron | 25.0% |
| !! | TATTTGAAGTCTACCTAATT+AGG | + | chr1.4:83401897-83401916 | None:intergenic | 25.0% |
| !!! | ATTTTAGCCATTTCCTAATT+AGG | - | chr1.4:83401881-83401900 | MS.gene73461:intron | 25.0% |
| AAACAATCTTTACCACTTGA+AGG | + | chr1.4:83401583-83401602 | None:intergenic | 30.0% | |
| AAGAACAGTTCCAAATTTCT+CGG | + | chr1.4:83399054-83399073 | None:intergenic | 30.0% | |
| AAGAATCACCAAAACTAACA+AGG | - | chr1.4:83402171-83402190 | MS.gene73461:intron | 30.0% | |
| AAGTAGTGATTTACATGCAA+AGG | + | chr1.4:83401128-83401147 | None:intergenic | 30.0% | |
| AAGTCTACCTAATTAGGAAA+TGG | + | chr1.4:83401891-83401910 | None:intergenic | 30.0% | |
| AATAATGTAGTTGCAGTTGT+TGG | + | chr1.4:83402105-83402124 | None:intergenic | 30.0% | |
| ACACTTTATAGCACTTACAT+TGG | + | chr1.4:83400855-83400874 | None:intergenic | 30.0% | |
| ACAGGACACAAAATTTCTAA+AGG | + | chr1.4:83399387-83399406 | None:intergenic | 30.0% | |
| ATAGGAGAGATTTAAAGACT+GGG | - | chr1.4:83401442-83401461 | MS.gene73461:intron | 30.0% | |
| ATTATTCAAAAATAGGGTCC+TGG | - | chr1.4:83402119-83402138 | MS.gene73461:intron | 30.0% | |
| CAAAGATGATATGTTACATC+AGG | + | chr1.4:83402486-83402505 | None:intergenic | 30.0% | |
| CACATTCAAAATCATACTCA+AGG | + | chr1.4:83401061-83401080 | None:intergenic | 30.0% | |
| CAGGACACAAAATTTCTAAA+GGG | + | chr1.4:83399386-83399405 | None:intergenic | 30.0% | |
| CTCTTTACTCTCTTTGATAT+TGG | - | chr1.4:83401191-83401210 | MS.gene73461:intron | 30.0% | |
| GATACTTAAAAGATACTCGA+CGG | - | chr1.4:83399857-83399876 | MS.gene73461:CDS | 30.0% | |
| GCTTGGATTTGTACATAAAT+AGG | + | chr1.4:83400583-83400602 | None:intergenic | 30.0% | |
| GTAATGAAGTAATGCTACAT+TGG | + | chr1.4:83400758-83400777 | None:intergenic | 30.0% | |
| GTACAATCCATATCATTCTA+AGG | + | chr1.4:83399693-83399712 | None:intergenic | 30.0% | |
| GTTCGACACATAAATTGTTT+CGG | - | chr1.4:83401034-83401053 | MS.gene73461:intron | 30.0% | |
| GTTTGATCCTTAGAATGATA+TGG | - | chr1.4:83399683-83399702 | MS.gene73461:CDS | 30.0% | |
| TATAGGAGAGATTTAAAGAC+TGG | - | chr1.4:83401441-83401460 | MS.gene73461:intron | 30.0% | |
| TATCATGACAAATATCAGGA+AGG | - | chr1.4:83402449-83402468 | MS.gene73461:CDS | 30.0% | |
| TCTTTCTTTCACTCTATGAT+AGG | + | chr1.4:83401785-83401804 | None:intergenic | 30.0% | |
| TGTAGCATTACTTCATTACT+CGG | - | chr1.4:83400759-83400778 | MS.gene73461:intron | 30.0% | |
| TGTATACTTAATAGGGAACT+TGG | + | chr1.4:83400690-83400709 | None:intergenic | 30.0% | |
| TTGGAAGAAGAAAGAAAAAG+AGG | + | chr1.4:83402086-83402105 | None:intergenic | 30.0% | |
| ! | AAAATGCATGTCTCTTTTCT+TGG | - | chr1.4:83402025-83402044 | MS.gene73461:intron | 30.0% |
| ! | AACATTTTCAACCCAAATTG+AGG | + | chr1.4:83399114-83399133 | None:intergenic | 30.0% |
| ! | AGGACACAAAATTTCTAAAG+GGG | + | chr1.4:83399385-83399404 | None:intergenic | 30.0% |
| ! | ATTATTAGTGCTACTCTGTT+CGG | - | chr1.4:83399504-83399523 | MS.gene73461:intron | 30.0% |
| ! | CTGATGTGAGACTATTTTAT+GGG | - | chr1.4:83401290-83401309 | MS.gene73461:intron | 30.0% |
| ! | TCTGATGTGAGACTATTTTA+TGG | - | chr1.4:83401289-83401308 | MS.gene73461:intron | 30.0% |
| ! | TGACAACAATGTCATCATTT+TGG | + | chr1.4:83402242-83402261 | None:intergenic | 30.0% |
| ! | TGATGTGAGACTATTTTATG+GGG | - | chr1.4:83401291-83401310 | MS.gene73461:intron | 30.0% |
| !! | ATGATGGATCAATAATGTCT+TGG | + | chr1.4:83402214-83402233 | None:intergenic | 30.0% |
| !! | CAATTTGGGTTGAAAATGTT+AGG | - | chr1.4:83399114-83399133 | MS.gene73461:intron | 30.0% |
| !! | CGACAGTAATGATTGTTTTT+AGG | - | chr1.4:83401805-83401824 | MS.gene73461:intron | 30.0% |
| !! | CTTTGCAATTTTAATCATCG+CGG | + | chr1.4:83401923-83401942 | None:intergenic | 30.0% |
| !! | GAATTCATTGTTTCTACTGA+TGG | - | chr1.4:83400999-83401018 | MS.gene73461:intron | 30.0% |
| !! | GGATAAAACCTTGTTAGTTT+TGG | + | chr1.4:83402182-83402201 | None:intergenic | 30.0% |
| ACATCTATTCTTGTTGCTGA+TGG | - | chr1.4:83402733-83402752 | MS.gene73461:CDS | 35.0% | |
| ACTCTTGCACTTACTTTCTT+TGG | + | chr1.4:83399665-83399684 | None:intergenic | 35.0% | |
| AGAACAGTTCCAAATTTCTC+GGG | + | chr1.4:83399053-83399072 | None:intergenic | 35.0% | |
| AGCGTCAATAAGTTTCAACT+AGG | - | chr1.4:83402638-83402657 | MS.gene73461:CDS | 35.0% | |
| ATAGACATGATTACCTTTGC+AGG | - | chr1.4:83401603-83401622 | MS.gene73461:intron | 35.0% | |
| ATCGTAAAATCAAGGAAGCT+TGG | + | chr1.4:83400600-83400619 | None:intergenic | 35.0% | |
| ATGACACATTCACAACCTAA+AGG | + | chr1.4:83399585-83399604 | None:intergenic | 35.0% | |
| ATGATGACATTGTTGTCACT+CGG | - | chr1.4:83402244-83402263 | MS.gene73461:CDS | 35.0% | |
| CAAGGCTTCATATTGTCAAA+AGG | + | chr1.4:83401367-83401386 | None:intergenic | 35.0% | |
| CAGTATCTTCAGCTTAAAGT+CGG | - | chr1.4:83398834-83398853 | MS.gene73461:intron | 35.0% | |
| GGCTATTCATCGTAAAATCA+AGG | + | chr1.4:83400608-83400627 | None:intergenic | 35.0% | |
| TAACTAAACAAGAACGACAG+TGG | + | chr1.4:83401752-83401771 | None:intergenic | 35.0% | |
| TGTCATGATATTCTCCCAAT+TGG | + | chr1.4:83402439-83402458 | None:intergenic | 35.0% | |
| TTACGATTCAAAATCGCTTG+TGG | + | chr1.4:83400663-83400682 | None:intergenic | 35.0% | |
| TTAGTGATTCATTGGCACTA+TGG | - | chr1.4:83399406-83399425 | MS.gene73461:intron | 35.0% | |
| TTATTGTGTGCAGTCCAATT+CGG | - | chr1.4:83401230-83401249 | MS.gene73461:intron | 35.0% | |
| TTTAAAGACTGGGAATCTTC+CGG | - | chr1.4:83401452-83401471 | MS.gene73461:intron | 35.0% | |
| TTTAAGCTGAAGATACTGAC+CGG | + | chr1.4:83398832-83398851 | None:intergenic | 35.0% | |
| ! | AGGTAAAGTGTGTGGAATTT+TGG | - | chr1.4:83401540-83401559 | MS.gene73461:intron | 35.0% |
| ! | CATCATTTTGGACAGTATGA+TGG | + | chr1.4:83402230-83402249 | None:intergenic | 35.0% |
| ! | GGAATGGGTTTGATATTAGT+CGG | - | chr1.4:83399018-83399037 | MS.gene73461:intron | 35.0% |
| ! | TTAGGTTGTGAATGTGTCAT+TGG | - | chr1.4:83399585-83399604 | MS.gene73461:intron | 35.0% |
| !! | AGTTTTGGTGATTCTTCTAC+CGG | + | chr1.4:83402167-83402186 | None:intergenic | 35.0% |
| !! | ATTTTGGAAAGGATGTTCCA+TGG | - | chr1.4:83402294-83402313 | MS.gene73461:CDS | 35.0% |
| !! | TCATAGGTACTGAATGTACT+CGG | - | chr1.4:83400391-83400410 | MS.gene73461:intron | 35.0% |
| !!! | TTTTGGTGAAGAGTGTTGTT+GGG | - | chr1.4:83398931-83398950 | MS.gene73461:intron | 35.0% |
| !!! | TTTTTGGTGAAGAGTGTTGT+TGG | - | chr1.4:83398930-83398949 | MS.gene73461:intron | 35.0% |
| AAGCTAAGCACAAGTCCATA+GGG | - | chr1.4:83400505-83400524 | MS.gene73461:intron | 40.0% | |
| AAGTATGAGAGGGTTCCAAT+TGG | - | chr1.4:83402421-83402440 | MS.gene73461:CDS | 40.0% | |
| AGTATGAGAGGGTTCCAATT+GGG | - | chr1.4:83402422-83402441 | MS.gene73461:CDS | 40.0% | |
| AGTGCCAATGAATCACTAAC+AGG | + | chr1.4:83399405-83399424 | None:intergenic | 40.0% | |
| ATAGCAAGAAACGACGGTTT+CGG | + | chr1.4:83398867-83398886 | None:intergenic | 40.0% | |
| ATCACTCTACAAGTCTACCA+AGG | + | chr1.4:83400911-83400930 | None:intergenic | 40.0% | |
| ATCATCATTGAAGGAGCTAG+AGG | - | chr1.4:83402331-83402350 | MS.gene73461:CDS | 40.0% | |
| ATTCAAAAATAGGGTCCTGG+TGG | - | chr1.4:83402122-83402141 | MS.gene73461:intron | 40.0% | |
| ATTCGGTCACTTATTGAGTC+AGG | - | chr1.4:83401247-83401266 | MS.gene73461:intron | 40.0% | |
| ATTGAGTCAGGATTTGATGC+TGG | - | chr1.4:83401259-83401278 | MS.gene73461:intron | 40.0% | |
| CGCTTGTGGCATAACATAAT+TGG | + | chr1.4:83400649-83400668 | None:intergenic | 40.0% | |
| CTCACTTACTACTTGTACAC+CGG | - | chr1.4:83402145-83402164 | MS.gene73461:intron | 40.0% | |
| CTTTGTACAGGTAAAGTGTG+TGG | - | chr1.4:83401532-83401551 | MS.gene73461:intron | 40.0% | |
| GAACCCTCTCATACTTTATG+CGG | + | chr1.4:83402417-83402436 | None:intergenic | 40.0% | |
| GACTCAATAAGTGACCGAAT+TGG | + | chr1.4:83401247-83401266 | None:intergenic | 40.0% | |
| GTCAGTTTCTGCCTCAATTT+GGG | - | chr1.4:83399100-83399119 | MS.gene73461:intron | 40.0% | |
| GTGTCCTGTTAGTGATTCAT+TGG | - | chr1.4:83399398-83399417 | MS.gene73461:intron | 40.0% | |
| GTTTCTGTTGCAACTCTATC+TGG | - | chr1.4:83401102-83401121 | MS.gene73461:intron | 40.0% | |
| TAACAATTGGCGTTGCCTTT+AGG | - | chr1.4:83399567-83399586 | MS.gene73461:intron | 40.0% | |
| TACAGGTACAATCTTGACAC+CGG | + | chr1.4:83401474-83401493 | None:intergenic | 40.0% | |
| TCATCTGGTTGAGACAATAC+AGG | + | chr1.4:83401491-83401510 | None:intergenic | 40.0% | |
| TGATGACATTGTTGTCACTC+GGG | - | chr1.4:83402245-83402264 | MS.gene73461:CDS | 40.0% | |
| TGGATGAAAGTAACGAGAGA+GGG | - | chr1.4:83400025-83400044 | MS.gene73461:CDS | 40.0% | |
| TGGTAGACTTGTAGAGTGAT+TGG | - | chr1.4:83400911-83400930 | MS.gene73461:intron | 40.0% | |
| TGTCTCAACCAGATGATAGT+TGG | - | chr1.4:83401495-83401514 | MS.gene73461:intron | 40.0% | |
| TTATCCAACCCTTTGTCAAC+TGG | - | chr1.4:83401649-83401668 | MS.gene73461:intron | 40.0% | |
| TTGTACTGAACTATGAAGCC+CGG | - | chr1.4:83399707-83399726 | MS.gene73461:intron | 40.0% | |
| TTTAGGAAACCGAACCTACT+AGG | - | chr1.4:83401822-83401841 | MS.gene73461:intron | 40.0% | |
| TTTGCTTGACTACCTTCAAG+TGG | - | chr1.4:83401568-83401587 | MS.gene73461:intron | 40.0% | |
| ! | ATACCGTATCCCAGAAGTAT+CGG | - | chr1.4:83399798-83399817 | MS.gene73461:CDS | 40.0% |
| ! | GCTATAAAGTGTTTCAGCCA+TGG | - | chr1.4:83400863-83400882 | MS.gene73461:intron | 40.0% |
| !! | ATTCCGATACTTCTGGGATA+CGG | + | chr1.4:83399804-83399823 | None:intergenic | 40.0% |
| !! | GAGTGGTGTGTTTGAGTTTT+TGG | - | chr1.4:83398914-83398933 | MS.gene73461:intron | 40.0% |
| !! | TATGAGGGCATCATCATTGA+AGG | - | chr1.4:83402322-83402341 | MS.gene73461:CDS | 40.0% |
| AACACCAGTTGACACAAACC+AGG | + | chr1.4:83402608-83402627 | None:intergenic | 45.0% | |
| ACAGTTCCAAATTTCTCGGG+TGG | + | chr1.4:83399050-83399069 | None:intergenic | 45.0% | |
| ACCACCGCATAAAGTATGAG+AGG | - | chr1.4:83402410-83402429 | MS.gene73461:CDS | 45.0% | |
| ACCTAACTGATAGACAGTCG+AGG | - | chr1.4:83399614-83399633 | MS.gene73461:intron | 45.0% | |
| ACTGTTCTTGTCTTTGCCAC+TGG | - | chr1.4:83399065-83399084 | MS.gene73461:intron | 45.0% | |
| AGAGCTAGTCCTAGTAGGTT+CGG | + | chr1.4:83401834-83401853 | None:intergenic | 45.0% | |
| AGTACAGCACCAGTTGACAA+AGG | + | chr1.4:83401661-83401680 | None:intergenic | 45.0% | |
| ATACGGGTACGATACGATAC+GGG | + | chr1.4:83400352-83400371 | None:intergenic | 45.0% | |
| ATTCCAGAGCTAGTCCTAGT+AGG | + | chr1.4:83401839-83401858 | None:intergenic | 45.0% | |
| CAACCAGATGATAGTTGGAC+TGG | - | chr1.4:83401500-83401519 | MS.gene73461:intron | 45.0% | |
| CAGTTCCAAATTTCTCGGGT+GGG | + | chr1.4:83399049-83399068 | None:intergenic | 45.0% | |
| CATCTCTCAATACAGTGTCC+TGG | - | chr1.4:83402587-83402606 | MS.gene73461:CDS | 45.0% | |
| CATTCAGTACCTATGAAGCC+CGG | + | chr1.4:83400387-83400406 | None:intergenic | 45.0% | |
| CCACCGCATAAAGTATGAGA+GGG | - | chr1.4:83402411-83402430 | MS.gene73461:CDS | 45.0% | |
| CCACTCTTAATCGCAAGCTT+CGG | + | chr1.4:83398900-83398919 | None:intergenic | 45.0% | |
| CCTAACTGATAGACAGTCGA+GGG | - | chr1.4:83399615-83399634 | MS.gene73461:intron | 45.0% | |
| CCTGAAGAGAATGGCTTATC+AGG | - | chr1.4:83401321-83401340 | MS.gene73461:intron | 45.0% | |
| CCTGATAAGCCATTCTCTTC+AGG | + | chr1.4:83401324-83401343 | None:intergenic | 45.0% | |
| CTAACTGATAGACAGTCGAG+GGG | - | chr1.4:83399616-83399635 | MS.gene73461:intron | 45.0% | |
| CTCTACAAGTCTACCAAGGA+AGG | + | chr1.4:83400907-83400926 | None:intergenic | 45.0% | |
| GAAAAGTCTCCTTCTCCCTA+TGG | + | chr1.4:83400523-83400542 | None:intergenic | 45.0% | |
| GAAGCGATAGCAAGAAACGA+CGG | + | chr1.4:83398873-83398892 | None:intergenic | 45.0% | |
| GAAGCTAAGCACAAGTCCAT+AGG | - | chr1.4:83400504-83400523 | MS.gene73461:intron | 45.0% | |
| GATACGGGTACGATACGATA+CGG | + | chr1.4:83400353-83400372 | None:intergenic | 45.0% | |
| GGATGAAAGTAACGAGAGAG+GGG | - | chr1.4:83400026-83400045 | MS.gene73461:CDS | 45.0% | |
| GGATGTTGTTGAGCTTAGTC+CGG | - | chr1.4:83398989-83399008 | MS.gene73461:intron | 45.0% | |
| GGCAGAAACTGACCTAATTC+CGG | + | chr1.4:83399093-83399112 | None:intergenic | 45.0% | |
| GGTCAGTTTCTGCCTCAATT+TGG | - | chr1.4:83399099-83399118 | MS.gene73461:intron | 45.0% | |
| GTACAGCACCAGTTGACAAA+GGG | + | chr1.4:83401660-83401679 | None:intergenic | 45.0% | |
| GTGGATGAAAGTAACGAGAG+AGG | - | chr1.4:83400024-83400043 | MS.gene73461:CDS | 45.0% | |
| GTTGAGCTTAGTCCGGTTAT+GGG | - | chr1.4:83398996-83399015 | MS.gene73461:intron | 45.0% | |
| TATCCGATACGTATCCGACA+CGG | + | chr1.4:83399755-83399774 | None:intergenic | 45.0% | |
| TCAAACCCATTCCCCATAAC+CGG | + | chr1.4:83399011-83399030 | None:intergenic | 45.0% | |
| TCATTGAAGGAGCTAGAGGA+TGG | - | chr1.4:83402335-83402354 | MS.gene73461:CDS | 45.0% | |
| TCTCCAGTCCAACTATCATC+TGG | + | chr1.4:83401506-83401525 | None:intergenic | 45.0% | |
| TGAGAGATGAAGCAGCTAAC+TGG | + | chr1.4:83402576-83402595 | None:intergenic | 45.0% | |
| TGGTCGAGCAAATTGACATG+TGG | + | chr1.4:83400629-83400648 | None:intergenic | 45.0% | |
| TGGTGGGGTTTAGATTGAAG+CGG | + | chr1.4:83398641-83398660 | None:intergenic | 45.0% | |
| TGTTGAGCTTAGTCCGGTTA+TGG | - | chr1.4:83398995-83399014 | MS.gene73461:intron | 45.0% | |
| TTAGTCCGGTTATGGGGAAT+GGG | - | chr1.4:83399003-83399022 | MS.gene73461:intron | 45.0% | |
| TTGAGCTTAGTCCGGTTATG+GGG | - | chr1.4:83398997-83399016 | MS.gene73461:intron | 45.0% | |
| TTGGAAAGGATGTTCCATGG+AGG | - | chr1.4:83402297-83402316 | MS.gene73461:CDS | 45.0% | |
| TTTCAGCCATGGCTGTAAGA+GGG | - | chr1.4:83400874-83400893 | MS.gene73461:intron | 45.0% | |
| ! | AGCCATTCTCTTCAGGTTTC+TGG | + | chr1.4:83401317-83401336 | None:intergenic | 45.0% |
| ! | ATGTTCCATGGAGGAGTATG+AGG | - | chr1.4:83402306-83402325 | MS.gene73461:CDS | 45.0% |
| ! | CGTTGTGTGGGTTGAAGAAA+GGG | - | chr1.4:83398967-83398986 | MS.gene73461:intron | 45.0% |
| ! | GATAGTTGGACTGGAGAAAG+TGG | - | chr1.4:83401509-83401528 | MS.gene73461:intron | 45.0% |
| ! | GATGAGGCGGTGTTAATGAA+AGG | + | chr1.4:83398557-83398576 | None:intergenic | 45.0% |
| ! | GGTTGTGAATGTGTCATTGG+TGG | - | chr1.4:83399588-83399607 | MS.gene73461:intron | 45.0% |
| ! | GTTGTGTGGGTTGAAGAAAG+GGG | - | chr1.4:83398968-83398987 | MS.gene73461:intron | 45.0% |
| ! | TGAAGCAGCTAACTGGTTCA+CGG | + | chr1.4:83402569-83402588 | None:intergenic | 45.0% |
| ! | TGTTCCATGGAGGAGTATGA+GGG | - | chr1.4:83402307-83402326 | MS.gene73461:CDS | 45.0% |
| !! | CAACTGGTGCTGTACTTTGT+GGG | - | chr1.4:83401665-83401684 | MS.gene73461:intron | 45.0% |
| !! | CTAGCGAGGTCATTTTGGAA+AGG | - | chr1.4:83402283-83402302 | MS.gene73461:CDS | 45.0% |
| !! | TACTTCTGGGATACGGTATC+CGG | + | chr1.4:83399797-83399816 | None:intergenic | 45.0% |
| !! | TAGGTACTGAATGTACTCGG+AGG | - | chr1.4:83400394-83400413 | MS.gene73461:intron | 45.0% |
| !! | TCAACTGGTGCTGTACTTTG+TGG | - | chr1.4:83401664-83401683 | MS.gene73461:intron | 45.0% |
| !! | TGGAGAAAGTGGCTTTGTAC+AGG | - | chr1.4:83401520-83401539 | MS.gene73461:intron | 45.0% |
| !!! | TTGGACTAGCGAGGTCATTT+TGG | - | chr1.4:83402278-83402297 | MS.gene73461:CDS | 45.0% |
| AACGTGGAAGAGTGACTCAG+CGG | + | chr1.4:83398760-83398779 | None:intergenic | 50.0% | |
| AACTTGCCCTCTTACAGCCA+TGG | + | chr1.4:83400883-83400902 | None:intergenic | 50.0% | |
| ACTACGTATCCGGGCTTCAT+AGG | - | chr1.4:83400375-83400394 | MS.gene73461:intron | 50.0% | |
| AGAGGGCAAGTTACCTTCCT+TGG | - | chr1.4:83400891-83400910 | MS.gene73461:intron | 50.0% | |
| AGCACAAGTCCATAGGGAGA+AGG | - | chr1.4:83400511-83400530 | MS.gene73461:intron | 50.0% | |
| AGCACCAGTTGACAAAGGGT+TGG | + | chr1.4:83401656-83401675 | None:intergenic | 50.0% | |
| ATACGTATCCGACACGGGTA+CGG | + | chr1.4:83399749-83399768 | None:intergenic | 50.0% | |
| ATAGACAGTCGAGGGGAACT+AGG | - | chr1.4:83399623-83399642 | MS.gene73461:intron | 50.0% | |
| ATCCGATACGTATCCGACAC+GGG | + | chr1.4:83399754-83399773 | None:intergenic | 50.0% | |
| ATCGACCCACCCGAGAAATT+TGG | - | chr1.4:83399041-83399060 | MS.gene73461:intron | 50.0% | |
| CAAGTAGTAAGTGAGCCACC+AGG | + | chr1.4:83402140-83402159 | None:intergenic | 50.0% | |
| CAGGATTTGATGCTGGCAAG+AGG | - | chr1.4:83401266-83401285 | MS.gene73461:intron | 50.0% | |
| CCCTCGACTGTCTATCAGTT+AGG | + | chr1.4:83399618-83399637 | None:intergenic | 50.0% | |
| CCCTCTCATACTTTATGCGG+TGG | + | chr1.4:83402414-83402433 | None:intergenic | 50.0% | |
| CCGAAGCTTGCGATTAAGAG+TGG | - | chr1.4:83398897-83398916 | MS.gene73461:intron | 50.0% | |
| CGTAGGATGGACATGGGAAA+GGG | + | chr1.4:83398618-83398637 | None:intergenic | 50.0% | |
| CTCGCTAGTCCAATTAGACC+AGG | + | chr1.4:83402271-83402290 | None:intergenic | 50.0% | |
| CTCGTATATGCAGCCTGCAA+AGG | + | chr1.4:83401619-83401638 | None:intergenic | 50.0% | |
| CTCTTAATCGCAAGCTTCGG+CGG | + | chr1.4:83398897-83398916 | None:intergenic | 50.0% | |
| CTTAGTCCGGTTATGGGGAA+TGG | - | chr1.4:83399002-83399021 | MS.gene73461:intron | 50.0% | |
| CTTGTCTTTGCCACTGGATC+CGG | - | chr1.4:83399071-83399090 | MS.gene73461:intron | 50.0% | |
| GAAGCCCGGATACTCCAAAA+TGG | - | chr1.4:83399721-83399740 | MS.gene73461:intron | 50.0% | |
| GGCCAGAAACCTGAAGAGAA+TGG | - | chr1.4:83401312-83401331 | MS.gene73461:intron | 50.0% | |
| GGCTGCATATACGAGAGCAA+AGG | - | chr1.4:83401624-83401643 | MS.gene73461:intron | 50.0% | |
| GGTTTAGATTGAAGCGGCGT+AGG | + | chr1.4:83398635-83398654 | None:intergenic | 50.0% | |
| GTACAGAGTCGCAGATCACA+AGG | + | chr1.4:83401385-83401404 | None:intergenic | 50.0% | |
| GTAGGATGGACATGGGAAAG+GGG | + | chr1.4:83398617-83398636 | None:intergenic | 50.0% | |
| GTTTCAGCCATGGCTGTAAG+AGG | - | chr1.4:83400873-83400892 | MS.gene73461:intron | 50.0% | |
| TACCCGTGTCGGATACGTAT+CGG | - | chr1.4:83399749-83399768 | MS.gene73461:intron | 50.0% | |
| TAGATTGAAGCGGCGTAGGA+TGG | + | chr1.4:83398631-83398650 | None:intergenic | 50.0% | |
| TAGGATGGACATGGGAAAGG+GGG | + | chr1.4:83398616-83398635 | None:intergenic | 50.0% | |
| TATCGGATACCGATACTCCG+CGG | - | chr1.4:83399766-83399785 | MS.gene73461:intron | 50.0% | |
| TGACCTAATTCCGGATCCAG+TGG | + | chr1.4:83399084-83399103 | None:intergenic | 50.0% | |
| TGGGCAGAAACAGATGACTG+AGG | - | chr1.4:83401684-83401703 | MS.gene73461:intron | 50.0% | |
| TTGCCACTGGATCCGGAATT+AGG | - | chr1.4:83399078-83399097 | MS.gene73461:intron | 50.0% | |
| ! | GAAGCAGCTAACTGGTTCAC+GGG | + | chr1.4:83402568-83402587 | None:intergenic | 50.0% |
| ! | GCGTTGTGTGGGTTGAAGAA+AGG | - | chr1.4:83398966-83398985 | MS.gene73461:intron | 50.0% |
| ! | GTGTCCTGGTTTGTGTCAAC+TGG | - | chr1.4:83402601-83402620 | MS.gene73461:CDS | 50.0% |
| ! | TGCCAGTTAAGCTGGCTCTT+GGG | - | chr1.4:83402360-83402379 | MS.gene73461:CDS | 50.0% |
| ! | TTGCCAGTTAAGCTGGCTCT+TGG | - | chr1.4:83402359-83402378 | MS.gene73461:CDS | 50.0% |
| !! | CTGGTCTAATTGGACTAGCG+AGG | - | chr1.4:83402269-83402288 | MS.gene73461:CDS | 50.0% |
| !! | GAACCTACTAGGACTAGCTC+TGG | - | chr1.4:83401833-83401852 | MS.gene73461:intron | 50.0% |
| !! | GGATGGATTGCCAGTTAAGC+TGG | - | chr1.4:83402352-83402371 | MS.gene73461:CDS | 50.0% |
| !!! | CGGCACCATTTTGGAGTATC+CGG | + | chr1.4:83399729-83399748 | None:intergenic | 50.0% |
| !!! | GGCACCATTTTGGAGTATCC+GGG | + | chr1.4:83399728-83399747 | None:intergenic | 50.0% |
| AAAGGGTTGCGAGTCGGTGA+CGG | + | chr1.4:83398674-83398693 | None:intergenic | 55.0% | |
| AAAGTGCGCATGGGAGTGGA+GGG | + | chr1.4:83398586-83398605 | None:intergenic | 55.0% | |
| AAGCGGCGTAGGATGGACAT+GGG | + | chr1.4:83398624-83398643 | None:intergenic | 55.0% | |
| ACATTGTTGTCACTCGGGCC+TGG | - | chr1.4:83402250-83402269 | MS.gene73461:CDS | 55.0% | |
| ATGGACATGGGAAAGGGGGT+GGG | + | chr1.4:83398612-83398631 | None:intergenic | 55.0% | |
| CCCGGATACGTAGTGCGATA+CGG | + | chr1.4:83400369-83400388 | None:intergenic | 55.0% | |
| CCCGTATCGCACTACGTATC+CGG | - | chr1.4:83400365-83400384 | MS.gene73461:intron | 55.0% | |
| CCGGATACGTAGTGCGATAC+GGG | + | chr1.4:83400368-83400387 | None:intergenic | 55.0% | |
| CCGTATCGCACTACGTATCC+GGG | - | chr1.4:83400366-83400385 | MS.gene73461:intron | 55.0% | |
| CGGAAACGTCGATGGAAACG+TGG | + | chr1.4:83398776-83398795 | None:intergenic | 55.0% | |
| GACGGTGGTGTCTTGACGTA+CGG | + | chr1.4:83398703-83398722 | None:intergenic | 55.0% | |
| GAGTGGAGGGTAAGACGATG+AGG | + | chr1.4:83398573-83398592 | None:intergenic | 55.0% | |
| GATGCCCTCATACTCCTCCA+TGG | + | chr1.4:83402314-83402333 | None:intergenic | 55.0% | |
| GCGTAGGATGGACATGGGAA+AGG | + | chr1.4:83398619-83398638 | None:intergenic | 55.0% | |
| TAAAGTGCGCATGGGAGTGG+AGG | + | chr1.4:83398587-83398606 | None:intergenic | 55.0% | |
| TACGTCAAGACACCACCGTC+TGG | - | chr1.4:83398703-83398722 | MS.gene73461:intron | 55.0% | |
| TCACTCGGGCCTGGTCTAAT+TGG | - | chr1.4:83402259-83402278 | MS.gene73461:CDS | 55.0% | |
| TGGAGGGTAAGACGATGAGG+CGG | + | chr1.4:83398570-83398589 | None:intergenic | 55.0% | |
| TGTGAGACGTGGCAAGGTCA+GGG | + | chr1.4:83398803-83398822 | None:intergenic | 55.0% | |
| ! | ACACGGGTACGGCACCATTT+TGG | + | chr1.4:83399738-83399757 | None:intergenic | 55.0% |
| ! | CCAGTTAAGCTGGCTCTTGG+GGG | - | chr1.4:83402362-83402381 | MS.gene73461:CDS | 55.0% |
| ! | GCCAGTTAAGCTGGCTCTTG+GGG | - | chr1.4:83402361-83402380 | MS.gene73461:CDS | 55.0% |
| ! | TACGGTATCCGGAGTATCCG+CGG | + | chr1.4:83399786-83399805 | None:intergenic | 55.0% |
| !! | AAATGGTGCCGTACCCGTGT+CGG | - | chr1.4:83399738-83399757 | MS.gene73461:intron | 55.0% |
| !! | CCACTGCAGAAGCGTTGTGT+GGG | - | chr1.4:83398955-83398974 | MS.gene73461:intron | 55.0% |
| !! | TCCACTGCAGAAGCGTTGTG+TGG | - | chr1.4:83398954-83398973 | MS.gene73461:intron | 55.0% |
| CCCACACAACGCTTCTGCAG+TGG | + | chr1.4:83398958-83398977 | None:intergenic | 60.0% | |
| CCCCCAAGAGCCAGCTTAAC+TGG | + | chr1.4:83402365-83402384 | None:intergenic | 60.0% | |
| CCGATACTCCGCGGATACTC+CGG | - | chr1.4:83399775-83399794 | MS.gene73461:intron | 60.0% | |
| CTCAGCGGCAGGTTCGATCT+CGG | + | chr1.4:83398745-83398764 | None:intergenic | 60.0% | |
| GAAGCGGCGTAGGATGGACA+TGG | + | chr1.4:83398625-83398644 | None:intergenic | 60.0% | |
| GAGAGGAGCTGGAGTCCAGA+CGG | + | chr1.4:83398721-83398740 | None:intergenic | 60.0% | |
| GATGGACATGGGAAAGGGGG+TGG | + | chr1.4:83398613-83398632 | None:intergenic | 60.0% | |
| GCAGGTTCGATCTCGGAGAG+AGG | + | chr1.4:83398738-83398757 | None:intergenic | 60.0% | |
| GGCTAAAGTGCGCATGGGAG+TGG | + | chr1.4:83398590-83398609 | None:intergenic | 60.0% | |
| GGGGGCAGTGGGACAGAAAA+CGG | - | chr1.4:83402380-83402399 | MS.gene73461:CDS | 60.0% | |
| GGTGGGGCTAAAGTGCGCAT+GGG | + | chr1.4:83398595-83398614 | None:intergenic | 60.0% | |
| GGTGGTGTCTTGACGTACGG+CGG | + | chr1.4:83398700-83398719 | None:intergenic | 60.0% | |
| GTGAGACGTGGCAAGGTCAG+GGG | + | chr1.4:83398802-83398821 | None:intergenic | 60.0% | |
| GTGTGAGACGTGGCAAGGTC+AGG | + | chr1.4:83398804-83398823 | None:intergenic | 60.0% | |
| TCGATCTCGGAGAGAGGAGC+TGG | + | chr1.4:83398732-83398751 | None:intergenic | 60.0% | |
| TGACGGAGACGGTGGTTGGT+GGG | + | chr1.4:83398657-83398676 | None:intergenic | 60.0% | |
| TGGAAGAGTGACTCAGCGGC+AGG | + | chr1.4:83398756-83398775 | None:intergenic | 60.0% | |
| TGGACATGGGAAAGGGGGTG+GGG | + | chr1.4:83398611-83398630 | None:intergenic | 60.0% | |
| TTGACGTACGGCGGCGGAAA+GGG | + | chr1.4:83398691-83398710 | None:intergenic | 60.0% | |
| ! | CCGGAGTATCCGCGGAGTAT+CGG | + | chr1.4:83399778-83399797 | None:intergenic | 60.0% |
| !! | TTGCGAGTCGGTGACGGAGA+CGG | + | chr1.4:83398668-83398687 | None:intergenic | 60.0% |
| AGGAGCTGGAGTCCAGACGG+TGG | + | chr1.4:83398718-83398737 | None:intergenic | 65.0% | |
| CGCGTGTGTGAGACGTGGCA+AGG | + | chr1.4:83398809-83398828 | None:intergenic | 65.0% | |
| CGGCGGAAAGGGTTGCGAGT+CGG | + | chr1.4:83398680-83398699 | None:intergenic | 65.0% | |
| CTTGACGTACGGCGGCGGAA+AGG | + | chr1.4:83398692-83398711 | None:intergenic | 65.0% | |
| GGGTGGGGCTAAAGTGCGCA+TGG | + | chr1.4:83398596-83398615 | None:intergenic | 65.0% | |
| GGTGTCTTGACGTACGGCGG+CGG | + | chr1.4:83398697-83398716 | None:intergenic | 65.0% | |
| ! | AAGCTGGCTCTTGGGGGCAG+TGG | - | chr1.4:83402368-83402387 | MS.gene73461:CDS | 65.0% |
| ! | AGCTGGCTCTTGGGGGCAGT+GGG | - | chr1.4:83402369-83402388 | MS.gene73461:CDS | 65.0% |
| ! | GACGGAGACGGTGGTTGGTG+GGG | + | chr1.4:83398656-83398675 | None:intergenic | 65.0% |
| ! | GTGACGGAGACGGTGGTTGG+TGG | + | chr1.4:83398658-83398677 | None:intergenic | 65.0% |
| !! | AGGGGCGTCGGAAACGTCGA+TGG | + | chr1.4:83398784-83398803 | None:intergenic | 65.0% |
| !! | TCGGTGACGGAGACGGTGGT+TGG | + | chr1.4:83398661-83398680 | None:intergenic | 65.0% |
| ACCGGCGCGTGTGTGAGACG+TGG | + | chr1.4:83398814-83398833 | None:intergenic | 70.0% | |
| GCCACGTCTCACACACGCGC+CGG | - | chr1.4:83398810-83398829 | MS.gene73461:intron | 70.0% | |
| ! | CGTGGCAAGGTCAGGGGCGT+CGG | + | chr1.4:83398796-83398815 | None:intergenic | 70.0% |
| !! | CGAGTCGGTGACGGAGACGG+TGG | + | chr1.4:83398665-83398684 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83398546 | 83402789 | 83398546 | ID=MS.gene73461 |
| chr1.4 | mRNA | 83398546 | 83402789 | 83398546 | ID=MS.gene73461.t1;Parent=MS.gene73461 |
| chr1.4 | exon | 83402236 | 83402789 | 83402236 | ID=MS.gene73461.t1.exon1;Parent=MS.gene73461.t1 |
| chr1.4 | CDS | 83402236 | 83402789 | 83402236 | ID=cds.MS.gene73461.t1;Parent=MS.gene73461.t1 |
| chr1.4 | exon | 83399993 | 83400092 | 83399993 | ID=MS.gene73461.t1.exon2;Parent=MS.gene73461.t1 |
| chr1.4 | CDS | 83399993 | 83400092 | 83399993 | ID=cds.MS.gene73461.t1;Parent=MS.gene73461.t1 |
| chr1.4 | exon | 83399794 | 83399889 | 83399794 | ID=MS.gene73461.t1.exon3;Parent=MS.gene73461.t1 |
| chr1.4 | CDS | 83399794 | 83399889 | 83399794 | ID=cds.MS.gene73461.t1;Parent=MS.gene73461.t1 |
| chr1.4 | exon | 83399630 | 83399710 | 83399630 | ID=MS.gene73461.t1.exon4;Parent=MS.gene73461.t1 |
| chr1.4 | CDS | 83399630 | 83399710 | 83399630 | ID=cds.MS.gene73461.t1;Parent=MS.gene73461.t1 |
| chr1.4 | exon | 83398546 | 83398608 | 83398546 | ID=MS.gene73461.t1.exon5;Parent=MS.gene73461.t1 |
| chr1.4 | CDS | 83398546 | 83398608 | 83398546 | ID=cds.MS.gene73461.t1;Parent=MS.gene73461.t1 |
| Gene Sequence |
| Protein sequence |
