Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96299.t1 | XP_003610567.1 | 97.2 | 399 | 11 | 0 | 1 | 399 | 1 | 399 | 3.70E-220 | 773.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96299.t1 | Q8VYH6 | 51.0 | 390 | 174 | 7 | 2 | 385 | 11 | 389 | 1.6e-102 | 374.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96299.t1 | G7JLR1 | 97.2 | 399 | 11 | 0 | 1 | 399 | 1 | 399 | 2.7e-220 | 773.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene96299 | -0.835203 | 1.92E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene96299 | -0.816866 | 4.43E-52 | -1.69E-46 |
| MS.gene049259 | MS.gene96299 | 0.801926 | 7.15E-49 | -1.69E-46 |
| MS.gene049265 | MS.gene96299 | 0.801811 | 7.55E-49 | -1.69E-46 |
| MS.gene049281 | MS.gene96299 | 0.814173 | 1.76E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene96299 | -0.809527 | 1.81E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene96299 | -0.825468 | 4.61E-54 | -1.69E-46 |
| MS.gene04932 | MS.gene96299 | 0.818973 | 1.48E-52 | -1.69E-46 |
| MS.gene049402 | MS.gene96299 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene049549 | MS.gene96299 | 0.810754 | 9.85E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene96299 | 0.838356 | 3.02E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene96299 | -0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene049634 | MS.gene96299 | 0.864415 | 1.24E-64 | -1.69E-46 |
| MS.gene049710 | MS.gene96299 | 0.803284 | 3.75E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene96299 | 0.826251 | 3.01E-54 | -1.69E-46 |
| MS.gene050083 | MS.gene96299 | 0.813626 | 2.33E-51 | -1.69E-46 |
| MS.gene050095 | MS.gene96299 | 0.812948 | 3.28E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene96299 | -0.80108 | 1.07E-48 | -1.69E-46 |
| MS.gene050165 | MS.gene96299 | -0.815192 | 1.05E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene96299 | -0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene96299 | -0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene96299 | -0.821583 | 3.74E-53 | -1.69E-46 |
| MS.gene050338 | MS.gene96299 | 0.823243 | 1.54E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene96299 | 0.843512 | 1.34E-58 | -1.69E-46 |
| MS.gene050444 | MS.gene96299 | -0.833336 | 5.65E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene96299 | -0.821928 | 3.11E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene96299 | -0.833917 | 4.05E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene96299 | -0.801716 | 7.90E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene96299 | -0.862037 | 6.73E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene96299 | -0.818414 | 1.98E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene96299 | 0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene05079 | MS.gene96299 | 0.855926 | 4.55E-62 | -1.69E-46 |
| MS.gene050809 | MS.gene96299 | 0.884862 | 1.33E-71 | -1.69E-46 |
| MS.gene05080 | MS.gene96299 | -0.830992 | 2.15E-55 | -1.69E-46 |
| MS.gene050833 | MS.gene96299 | 0.808112 | 3.63E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene96299 | -0.849671 | 2.78E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene96299 | -0.847563 | 1.07E-59 | -1.69E-46 |
| MS.gene050904 | MS.gene96299 | -0.801799 | 7.59E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene96299 | 0.848684 | 5.24E-60 | -1.69E-46 |
| MS.gene05104 | MS.gene96299 | 0.84529 | 4.45E-59 | -1.69E-46 |
| MS.gene051127 | MS.gene96299 | 0.840579 | 7.99E-58 | -1.69E-46 |
| MS.gene051138 | MS.gene96299 | 0.902333 | 1.08E-78 | -1.69E-46 |
| MS.gene051268 | MS.gene96299 | -0.805674 | 1.19E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene96299 | -0.803793 | 2.94E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene96299 | 0.824775 | 6.72E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene96299 | 0.831681 | 1.45E-55 | -1.69E-46 |
| MS.gene051422 | MS.gene96299 | 0.827163 | 1.82E-54 | -1.69E-46 |
| MS.gene051440 | MS.gene96299 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene96299 | 0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene051632 | MS.gene96299 | 0.831523 | 1.59E-55 | -1.69E-46 |
| MS.gene051651 | MS.gene96299 | 0.855047 | 8.20E-62 | -1.69E-46 |
| MS.gene051749 | MS.gene96299 | 0.83339 | 5.48E-56 | -1.69E-46 |
| MS.gene051863 | MS.gene96299 | 0.821416 | 4.09E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene96299 | -0.818686 | 1.72E-52 | -1.69E-46 |
| MS.gene051907 | MS.gene96299 | 0.826514 | 2.60E-54 | -1.69E-46 |
| MS.gene051973 | MS.gene96299 | 0.815582 | 8.59E-52 | -1.69E-46 |
| MS.gene052129 | MS.gene96299 | 0.86573 | 4.78E-65 | -1.69E-46 |
| MS.gene052211 | MS.gene96299 | 0.826338 | 2.87E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene96299 | 0.824095 | 9.72E-54 | -1.69E-46 |
| MS.gene05244 | MS.gene96299 | 0.814864 | 1.24E-51 | -1.69E-46 |
| MS.gene052606 | MS.gene96299 | 0.851566 | 8.16E-61 | -1.69E-46 |
| MS.gene052702 | MS.gene96299 | 0.842639 | 2.29E-58 | -1.69E-46 |
| MS.gene052703 | MS.gene96299 | 0.818199 | 2.22E-52 | -1.69E-46 |
| MS.gene052802 | MS.gene96299 | 0.852506 | 4.42E-61 | -1.69E-46 |
| MS.gene052805 | MS.gene96299 | 0.842165 | 3.05E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene96299 | -0.807645 | 4.57E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene96299 | -0.801089 | 1.06E-48 | -1.69E-46 |
| MS.gene053031 | MS.gene96299 | 0.803673 | 3.12E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene96299 | 0.813713 | 2.23E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene96299 | 0.87283 | 2.35E-67 | -1.69E-46 |
| MS.gene053479 | MS.gene96299 | -0.831604 | 1.52E-55 | -1.69E-46 |
| MS.gene053488 | MS.gene96299 | 0.853766 | 1.92E-61 | -1.69E-46 |
| MS.gene053561 | MS.gene96299 | 0.832313 | 1.02E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene96299 | -0.807642 | 4.57E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene96299 | 0.855555 | 5.83E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene96299 | -0.812934 | 3.30E-51 | -1.69E-46 |
| MS.gene054054 | MS.gene96299 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene96299 | 0.812702 | 3.71E-51 | -1.69E-46 |
| MS.gene054146 | MS.gene96299 | 0.808658 | 2.78E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene96299 | 0.836856 | 7.32E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene96299 | -0.812263 | 4.63E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene96299 | 0.840434 | 8.72E-58 | -1.69E-46 |
| MS.gene054707 | MS.gene96299 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene96299 | 0.802474 | 5.51E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene96299 | -0.816778 | 4.64E-52 | -1.69E-46 |
| MS.gene05483 | MS.gene96299 | 0.804582 | 2.02E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene96299 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene96299 | -0.80684 | 6.76E-50 | -1.69E-46 |
| MS.gene054959 | MS.gene96299 | 0.819071 | 1.41E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene96299 | 0.838567 | 2.66E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene96299 | 0.852464 | 4.54E-61 | -1.69E-46 |
| MS.gene055158 | MS.gene96299 | 0.80875 | 2.66E-50 | -1.69E-46 |
| MS.gene055202 | MS.gene96299 | 0.822927 | 1.82E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene96299 | -0.80762 | 4.62E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene96299 | -0.843273 | 1.55E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene96299 | -0.837682 | 4.50E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene96299 | -0.862015 | 6.83E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene96299 | -0.846238 | 2.46E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene96299 | -0.86552 | 5.56E-65 | -1.69E-46 |
| MS.gene05589 | MS.gene96299 | -0.850503 | 1.63E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene96299 | 0.862427 | 5.11E-64 | -1.69E-46 |
| MS.gene056198 | MS.gene96299 | 0.80204 | 6.78E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene96299 | 0.802978 | 4.34E-49 | -1.69E-46 |
| MS.gene056224 | MS.gene96299 | 0.857857 | 1.23E-62 | -1.69E-46 |
| MS.gene056359 | MS.gene96299 | 0.813217 | 2.86E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene96299 | -0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene96299 | -0.842293 | 2.82E-58 | -1.69E-46 |
| MS.gene056590 | MS.gene96299 | 0.824296 | 8.71E-54 | -1.69E-46 |
| MS.gene056591 | MS.gene96299 | 0.824623 | 7.30E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene96299 | -0.811944 | 5.43E-51 | -1.69E-46 |
| MS.gene056678 | MS.gene96299 | 0.828197 | 1.03E-54 | -1.69E-46 |
| MS.gene056688 | MS.gene96299 | 0.813349 | 2.68E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene96299 | -0.808719 | 2.70E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene96299 | 0.826092 | 3.28E-54 | -1.69E-46 |
| MS.gene056697 | MS.gene96299 | 0.833795 | 4.34E-56 | -1.69E-46 |
| MS.gene056748 | MS.gene96299 | 0.843296 | 1.53E-58 | -1.69E-46 |
| MS.gene056856 | MS.gene96299 | 0.928326 | 3.38E-92 | -1.69E-46 |
| MS.gene056857 | MS.gene96299 | 0.849584 | 2.94E-60 | -1.69E-46 |
| MS.gene056988 | MS.gene96299 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene96299 | 0.802989 | 4.32E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene96299 | -0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene96299 | 0.836027 | 1.19E-56 | -1.69E-46 |
| MS.gene057548 | MS.gene96299 | 0.81874 | 1.67E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene96299 | 0.854805 | 9.64E-62 | -1.69E-46 |
| MS.gene057550 | MS.gene96299 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene057717 | MS.gene96299 | 0.828918 | 6.88E-55 | -1.69E-46 |
| MS.gene057768 | MS.gene96299 | 0.859913 | 2.98E-63 | -1.69E-46 |
| MS.gene058067 | MS.gene96299 | 0.836335 | 9.94E-57 | -1.69E-46 |
| MS.gene058068 | MS.gene96299 | 0.845342 | 4.31E-59 | -1.69E-46 |
| MS.gene058093 | MS.gene96299 | 0.837327 | 5.55E-57 | -1.69E-46 |
| MS.gene058099 | MS.gene96299 | 0.862882 | 3.70E-64 | -1.69E-46 |
| MS.gene058109 | MS.gene96299 | 0.813191 | 2.90E-51 | -1.69E-46 |
| MS.gene058111 | MS.gene96299 | 0.806236 | 9.07E-50 | -1.69E-46 |
| MS.gene058117 | MS.gene96299 | 0.836086 | 1.15E-56 | -1.69E-46 |
| MS.gene058158 | MS.gene96299 | 0.830508 | 2.82E-55 | -1.69E-46 |
| MS.gene058171 | MS.gene96299 | 0.850189 | 1.99E-60 | -1.69E-46 |
| MS.gene058173 | MS.gene96299 | 0.840927 | 6.47E-58 | -1.69E-46 |
| MS.gene058175 | MS.gene96299 | 0.856128 | 3.97E-62 | -1.69E-46 |
| MS.gene058268 | MS.gene96299 | 0.827175 | 1.81E-54 | -1.69E-46 |
| MS.gene058269 | MS.gene96299 | 0.811344 | 7.34E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene96299 | 0.860269 | 2.32E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene96299 | -0.832845 | 7.49E-56 | -1.69E-46 |
| MS.gene058382 | MS.gene96299 | 0.818532 | 1.87E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene96299 | -0.82175 | 3.42E-53 | -1.69E-46 |
| MS.gene058452 | MS.gene96299 | 0.813881 | 2.04E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene96299 | -0.818349 | 2.05E-52 | -1.69E-46 |
| MS.gene058603 | MS.gene96299 | 0.897974 | 8.35E-77 | -1.69E-46 |
| MS.gene058773 | MS.gene96299 | -0.812374 | 4.38E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene96299 | -0.817177 | 3.77E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene96299 | -0.832425 | 9.52E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene96299 | -0.825956 | 3.53E-54 | -1.69E-46 |
| MS.gene059037 | MS.gene96299 | 0.80528 | 1.44E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene96299 | 0.827619 | 1.42E-54 | -1.69E-46 |
| MS.gene059069 | MS.gene96299 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene059070 | MS.gene96299 | 0.805903 | 1.07E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene96299 | -0.807548 | 4.79E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene96299 | 0.824124 | 9.57E-54 | -1.69E-46 |
| MS.gene059304 | MS.gene96299 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene059315 | MS.gene96299 | 0.826586 | 2.50E-54 | -1.69E-46 |
| MS.gene059526 | MS.gene96299 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene96299 | -0.819511 | 1.12E-52 | -1.69E-46 |
| MS.gene059690 | MS.gene96299 | 0.82981 | 4.18E-55 | -1.69E-46 |
| MS.gene059691 | MS.gene96299 | 0.828774 | 7.46E-55 | -1.69E-46 |
| MS.gene059694 | MS.gene96299 | 0.840438 | 8.69E-58 | -1.69E-46 |
| MS.gene059697 | MS.gene96299 | 0.840535 | 8.20E-58 | -1.69E-46 |
| MS.gene059699 | MS.gene96299 | 0.817094 | 3.94E-52 | -1.69E-46 |
| MS.gene059701 | MS.gene96299 | 0.811374 | 7.23E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene96299 | 0.826269 | 2.98E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene96299 | -0.843448 | 1.39E-58 | -1.69E-46 |
| MS.gene059916 | MS.gene96299 | 0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene96299 | 0.832245 | 1.06E-55 | -1.69E-46 |
| MS.gene059955 | MS.gene96299 | 0.83243 | 9.50E-56 | -1.69E-46 |
| MS.gene060087 | MS.gene96299 | 0.811757 | 5.97E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene96299 | 0.848029 | 7.95E-60 | -1.69E-46 |
| MS.gene060593 | MS.gene96299 | 0.820213 | 7.72E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene96299 | -0.837748 | 4.33E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene96299 | -0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene060823 | MS.gene96299 | 0.827391 | 1.61E-54 | -1.69E-46 |
| MS.gene06084 | MS.gene96299 | 0.838563 | 2.67E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene96299 | -0.829141 | 6.08E-55 | -1.69E-46 |
| MS.gene061044 | MS.gene96299 | 0.873875 | 1.05E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45410 | MS.gene96299 | PPI |
| MS.gene020907 | MS.gene96299 | PPI |
| MS.gene96299 | MS.gene38189 | PPI |
| MS.gene96299 | MS.gene020234 | PPI |
| MS.gene38073 | MS.gene96299 | PPI |
| MS.gene39320 | MS.gene96299 | PPI |
| MS.gene81207 | MS.gene96299 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96299.t1 | MTR_4g133620 | 97.243 | 399 | 11 | 0 | 1 | 399 | 1 | 399 | 0.0 | 804 |
| MS.gene96299.t1 | MTR_2g026080 | 70.321 | 374 | 107 | 3 | 25 | 396 | 29 | 400 | 0.0 | 532 |
| MS.gene96299.t1 | MTR_7g051910 | 42.448 | 384 | 196 | 8 | 15 | 389 | 15 | 382 | 6.41e-97 | 295 |
| MS.gene96299.t1 | MTR_3g058510 | 41.713 | 362 | 196 | 8 | 25 | 381 | 26 | 377 | 9.67e-87 | 268 |
| MS.gene96299.t1 | MTR_8g009880 | 32.117 | 411 | 238 | 10 | 6 | 397 | 9 | 397 | 1.99e-65 | 214 |
| MS.gene96299.t1 | MTR_5g097620 | 34.204 | 383 | 227 | 8 | 25 | 392 | 60 | 432 | 4.12e-65 | 214 |
| MS.gene96299.t1 | MTR_5g093520 | 32.817 | 387 | 227 | 11 | 6 | 372 | 13 | 386 | 6.13e-59 | 197 |
| MS.gene96299.t1 | MTR_8g028075 | 37.766 | 188 | 104 | 5 | 188 | 371 | 375 | 553 | 8.84e-31 | 124 |
| MS.gene96299.t1 | MTR_7g098270 | 34.921 | 189 | 95 | 3 | 4 | 192 | 7 | 167 | 9.51e-28 | 110 |
| MS.gene96299.t1 | MTR_8g011650 | 34.021 | 194 | 121 | 5 | 1 | 194 | 8 | 194 | 2.31e-25 | 103 |
| MS.gene96299.t1 | MTR_7g117375 | 27.632 | 304 | 195 | 9 | 87 | 384 | 101 | 385 | 3.84e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96299.t1 | AT5G47530 | 53.281 | 381 | 162 | 7 | 14 | 388 | 16 | 386 | 2.97e-136 | 395 |
| MS.gene96299.t1 | AT4G17280 | 50.254 | 394 | 175 | 7 | 1 | 386 | 10 | 390 | 1.47e-130 | 381 |
| MS.gene96299.t1 | AT5G35735 | 46.766 | 402 | 191 | 8 | 5 | 395 | 9 | 398 | 1.47e-116 | 345 |
| MS.gene96299.t1 | AT3G25290 | 43.733 | 375 | 191 | 8 | 15 | 378 | 18 | 383 | 1.35e-103 | 312 |
| MS.gene96299.t1 | AT3G25290 | 43.733 | 375 | 191 | 8 | 15 | 378 | 18 | 383 | 1.35e-103 | 312 |
| MS.gene96299.t1 | AT4G12980 | 43.511 | 393 | 200 | 8 | 2 | 382 | 6 | 388 | 5.99e-99 | 300 |
| MS.gene96299.t1 | AT3G59070 | 40.633 | 379 | 199 | 11 | 3 | 367 | 6 | 372 | 6.16e-83 | 261 |
| MS.gene96299.t1 | AT2G04850 | 35.789 | 380 | 219 | 9 | 29 | 392 | 27 | 397 | 5.65e-69 | 223 |
| MS.gene96299.t1 | AT5G48750 | 42.979 | 235 | 124 | 5 | 17 | 247 | 26 | 254 | 8.39e-57 | 187 |
| MS.gene96299.t1 | AT3G07570 | 29.444 | 360 | 193 | 13 | 4 | 335 | 9 | 335 | 9.75e-30 | 118 |
| MS.gene96299.t1 | AT3G61750 | 34.946 | 186 | 113 | 4 | 167 | 352 | 100 | 277 | 9.43e-29 | 114 |
| MS.gene96299.t1 | AT3G61750 | 34.946 | 186 | 113 | 4 | 167 | 352 | 177 | 354 | 2.54e-28 | 115 |
| MS.gene96299.t1 | AT3G07390 | 33.679 | 193 | 117 | 6 | 9 | 199 | 36 | 219 | 3.03e-23 | 98.6 |
| MS.gene96299.t1 | AT3G07390 | 38.182 | 110 | 63 | 3 | 15 | 123 | 40 | 145 | 7.41e-16 | 75.1 |
| MS.gene96299.t1 | AT5G54830 | 26.842 | 190 | 118 | 7 | 160 | 342 | 648 | 823 | 3.10e-11 | 65.9 |
Find 103 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTAGTTATCCTGTTTC+TGG | 0.137764 | 8.4:+1215817 | MS.gene96299:CDS |
| CATGCTTACATTGGTATTAT+TGG | 0.155934 | 8.4:+1217037 | MS.gene96299:CDS |
| GAAGTCTTGGATCTTGTTTC+TGG | 0.179617 | 8.4:+1216000 | MS.gene96299:CDS |
| GCCTACATAGTTGGATTATC+TGG | 0.214774 | 8.4:+1216746 | MS.gene96299:CDS |
| CATTGGTATTATTGGTGCTT+TGG | 0.218211 | 8.4:+1217045 | MS.gene96299:CDS |
| CCAAGACTTCCTTAGAGTTT+TGG | 0.257990 | 8.4:-1215987 | None:intergenic |
| GTTTGTAATGCTAATGCTTA+TGG | 0.273236 | 8.4:-1216954 | None:intergenic |
| ATGTTTGAAGTATATGCTTT+TGG | 0.274313 | 8.4:-1215763 | None:intergenic |
| ATTGGTATTATTGGTGCTTT+GGG | 0.280623 | 8.4:+1217046 | MS.gene96299:CDS |
| GAACAATAGCAAGTGCTCTA+TGG | 0.301053 | 8.4:-1216823 | None:intergenic |
| TCCAAATGGAACAACCTCTT+TGG | 0.315874 | 8.4:+1215894 | MS.gene96299:CDS |
| AAGACTTCAGATGGTGTTAA+TGG | 0.319234 | 8.4:+1217136 | MS.gene96299:CDS |
| CTGGAATAACTGCAACAAAT+AGG | 0.325023 | 8.4:+1215647 | MS.gene96299:CDS |
| TATACTTACTATGGCTTAAA+GGG | 0.330924 | 8.4:-1217182 | None:intergenic |
| CTTTGTTGTTTGAGAATGTT+TGG | 0.332596 | 8.4:-1215528 | None:intergenic |
| ATAGTTGGATTATCTGGTTT+TGG | 0.338557 | 8.4:+1216752 | MS.gene96299:CDS |
| CTCAACTTATGGTCTTTGTT+TGG | 0.344950 | 8.4:-1216890 | None:intergenic |
| TCCAGTAAAATCTCAACTTA+TGG | 0.345086 | 8.4:-1216901 | None:intergenic |
| CAACAAATAGGTGGGTTGCT+TGG | 0.346817 | 8.4:+1215659 | MS.gene96299:CDS |
| AAGGGTGCTGCTTGGATTGA+TGG | 0.347392 | 8.4:-1215683 | None:intergenic |
| ACCAAAGAGGTTGTTCCATT+TGG | 0.348727 | 8.4:-1215895 | None:intergenic |
| GCTTGTGCTCCGATCATGGC+TGG | 0.356922 | 8.4:-1215709 | None:intergenic |
| TAGGGGATCGTTACAAGAAC+TGG | 0.360418 | 8.4:+1217011 | MS.gene96299:CDS |
| ACCAATCCCACTTGCAGCTT+GGG | 0.378912 | 8.4:-1216028 | None:intergenic |
| AACAAATAGGTGGGTTGCTT+GGG | 0.381341 | 8.4:+1215660 | MS.gene96299:CDS |
| CAAGTCTCTGCCTACATAGT+TGG | 0.397780 | 8.4:+1216737 | MS.gene96299:CDS |
| AATATCTACCACCACGTTGT+AGG | 0.399297 | 8.4:+1216923 | MS.gene96299:CDS |
| TTTCAAAGGGTTTGAAGCAT+TGG | 0.401125 | 8.4:+1216979 | MS.gene96299:CDS |
| TGGTTCATGTATGGCAAGAT+GGG | 0.403428 | 8.4:+1215914 | MS.gene96299:CDS |
| TTGGTTCATGTATGGCAAGA+TGG | 0.409548 | 8.4:+1215913 | MS.gene96299:CDS |
| ATCTTCTCACCAAAACTCTA+AGG | 0.410472 | 8.4:+1215978 | MS.gene96299:CDS |
| TTCAAAGGGTTTGAAGCATT+GGG | 0.410583 | 8.4:+1216980 | MS.gene96299:CDS |
| CAACCTCTTTGGTTCATGTA+TGG | 0.419802 | 8.4:+1215905 | MS.gene96299:CDS |
| AGTTCTAAATGCAATAAGTT+GGG | 0.423172 | 8.4:+1216622 | MS.gene96299:CDS |
| TTTGGGCTTCCACTGGCTTG+TGG | 0.428919 | 8.4:-1215745 | None:intergenic |
| TGCTATTGTTCTTGTAACCT+TGG | 0.433426 | 8.4:+1216835 | MS.gene96299:CDS |
| ACCAGAAACAGGATAACTAA+TGG | 0.433626 | 8.4:-1215818 | None:intergenic |
| CCAAAACTCTAAGGAAGTCT+TGG | 0.434557 | 8.4:+1215987 | MS.gene96299:CDS |
| CAAAGCTTGTGCTCCGATCA+TGG | 0.437700 | 8.4:-1215713 | None:intergenic |
| TGGGGAATCTTGATGCCAAC+AGG | 0.450699 | 8.4:+1216641 | MS.gene96299:CDS |
| GCTGGGTCAAGGGTGCTGCT+TGG | 0.458703 | 8.4:-1215691 | None:intergenic |
| TGGTATTATTGGTGCTTTGG+GGG | 0.460113 | 8.4:+1217048 | MS.gene96299:CDS |
| GTGGCAGACAAACCAGAAAC+AGG | 0.463187 | 8.4:-1215829 | None:intergenic |
| GCTACTTTGACCCTTCCAAA+TGG | 0.468426 | 8.4:+1215880 | MS.gene96299:CDS |
| CATGATCGGAGCACAAGCTT+TGG | 0.470343 | 8.4:+1215714 | MS.gene96299:CDS |
| TCCCAAGCTGCAAGTGGGAT+TGG | 0.471818 | 8.4:+1216027 | MS.gene96299:CDS |
| AACCAATCCCACTTGCAGCT+TGG | 0.473554 | 8.4:-1216029 | None:intergenic |
| GATGGTGTTAATGGAGCAAA+TGG | 0.483049 | 8.4:+1217145 | MS.gene96299:CDS |
| ATATCTACCACCACGTTGTA+GGG | 0.487362 | 8.4:+1216924 | MS.gene96299:CDS |
| TCCGATCATGGCTGGGTCAA+GGG | 0.488469 | 8.4:-1215701 | None:intergenic |
| AACAATAGCAAGTGCTCTAT+GGG | 0.489652 | 8.4:-1216822 | None:intergenic |
| CTCCGATCATGGCTGGGTCA+AGG | 0.489759 | 8.4:-1215702 | None:intergenic |
| GGTATTATTGGTGCTTTGGG+GGG | 0.491041 | 8.4:+1217049 | MS.gene96299:CDS |
| TCAAATCCGCAGACCCTGCT+TGG | 0.493088 | 8.4:+1216693 | MS.gene96299:CDS |
| ACCCTTGACCCAGCCATGAT+CGG | 0.495736 | 8.4:+1215700 | MS.gene96299:CDS |
| AAGAGGTTGTTCCATTTGGA+AGG | 0.497441 | 8.4:-1215891 | None:intergenic |
| GATCGGAGCACAAGCTTTGG+TGG | 0.497818 | 8.4:+1215717 | MS.gene96299:CDS |
| GAGTTCTAAATGCAATAAGT+TGG | 0.504686 | 8.4:+1216621 | MS.gene96299:CDS |
| AGTAATAGCAAGGTATTTGA+AGG | 0.512011 | 8.4:+1216667 | MS.gene96299:CDS |
| TTGGTATTATTGGTGCTTTG+GGG | 0.518620 | 8.4:+1217047 | MS.gene96299:CDS |
| ATGTGAAGATAGAACCAAGC+AGG | 0.523540 | 8.4:-1216707 | None:intergenic |
| TTTGGTACTGGTCTCAAACT+CGG | 0.532870 | 8.4:+1216770 | MS.gene96299:CDS |
| TTTGGAAGCTTACACGTGGA+TGG | 0.533911 | 8.4:+1217084 | MS.gene96299:CDS |
| AGTTAACCTCGTACCTCCAC+TGG | 0.539955 | 8.4:+1215578 | MS.gene96299:CDS |
| TCCACGTGTAAGCTTCCAAA+AGG | 0.545026 | 8.4:-1217081 | None:intergenic |
| CTTGTGCTCCGATCATGGCT+GGG | 0.548227 | 8.4:-1215708 | None:intergenic |
| GAATAACTGCAACAAATAGG+TGG | 0.552346 | 8.4:+1215650 | MS.gene96299:CDS |
| CTTGCTATTACTGCTCCTGT+TGG | 0.560569 | 8.4:-1216656 | None:intergenic |
| GATTCATGGCTATGTTCTTG+AGG | 0.562296 | 8.4:-1215958 | None:intergenic |
| AACTGGAAGCATGCTTACAT+TGG | 0.570819 | 8.4:+1217028 | MS.gene96299:CDS |
| GGTTCATGTATGGCAAGATG+GGG | 0.572736 | 8.4:+1215915 | MS.gene96299:CDS |
| ACCAGATAATCCAACTATGT+AGG | 0.573850 | 8.4:-1216747 | None:intergenic |
| GTTCTAAATGCAATAAGTTG+GGG | 0.579470 | 8.4:+1216623 | MS.gene96299:CDS |
| AGAGGTTGTTCCATTTGGAA+GGG | 0.580852 | 8.4:-1215890 | None:intergenic |
| GCAGAGAACAAGACTTCAGA+TGG | 0.581792 | 8.4:+1217127 | MS.gene96299:CDS |
| CAAACTCGGTAGTGATTCAG+AGG | 0.584270 | 8.4:+1216784 | MS.gene96299:CDS |
| ACATGATTGGGTTTGAGCTG+AGG | 0.587718 | 8.4:-1215500 | None:intergenic |
| CATCATGTTGAGGCTTACGT+TGG | 0.594673 | 8.4:+1215444 | None:intergenic |
| AATCCCACTTGCAGCTTGGG+AGG | 0.599310 | 8.4:-1216025 | None:intergenic |
| GGTACCTCCCAAGCTGCAAG+TGG | 0.604136 | 8.4:+1216021 | MS.gene96299:CDS |
| GTGGCTATTCCACAAGCCAG+TGG | 0.609291 | 8.4:+1215736 | MS.gene96299:CDS |
| AATAACTGCAACAAATAGGT+GGG | 0.611835 | 8.4:+1215651 | MS.gene96299:CDS |
| TTGTTTCATCGTATGACCAG+TGG | 0.615698 | 8.4:-1215594 | None:intergenic |
| ACAAGCACACGGTTGCAAGA+AGG | 0.618408 | 8.4:+1215793 | MS.gene96299:CDS |
| GACATAGCATACATACACAC+TGG | 0.619673 | 8.4:+1215628 | MS.gene96299:CDS |
| GTTAATGGAGCAAATGGCTA+TGG | 0.624982 | 8.4:+1217151 | MS.gene96299:CDS |
| AAACACTTGAAGAGTTGCCA+AGG | 0.625483 | 8.4:-1216852 | None:intergenic |
| TTGCCATACATGAACCAAAG+AGG | 0.632447 | 8.4:-1215908 | None:intergenic |
| CAACAGGAGCAGTAATAGCA+AGG | 0.639419 | 8.4:+1216657 | MS.gene96299:CDS |
| TTTCATCGTATGACCAGTGG+AGG | 0.641448 | 8.4:-1215591 | None:intergenic |
| TGTGAAGATAGAACCAAGCA+GGG | 0.656540 | 8.4:-1216706 | None:intergenic |
| ATAGAACCAAGCAGGGTCTG+CGG | 0.662307 | 8.4:-1216699 | None:intergenic |
| AACCTCATTATTCTGATACG+TGG | 0.667735 | 8.4:-1215848 | None:intergenic |
| GTACCTCCCAAGCTGCAAGT+GGG | 0.668450 | 8.4:+1216022 | MS.gene96299:CDS |
| TGGAGGTACGAGGTTAACTG+TGG | 0.671548 | 8.4:-1215574 | None:intergenic |
| TGGTCATACGATGAAACAAG+TGG | 0.675142 | 8.4:+1215598 | MS.gene96299:CDS |
| TGCCACGTATCAGAATAATG+AGG | 0.677711 | 8.4:+1215846 | MS.gene96299:CDS |
| ACATTGTAGACACAAGCACA+CGG | 0.692248 | 8.4:+1215782 | MS.gene96299:CDS |
| TATGCTACTCAAAACACACA+AGG | 0.702224 | 8.4:-1215467 | None:intergenic |
| GTATGACCAGTGGAGGTACG+AGG | 0.705546 | 8.4:-1215584 | None:intergenic |
| AAACTCGGTAGTGATTCAGA+GGG | 0.706199 | 8.4:+1216785 | MS.gene96299:CDS |
| TAACATACCCTACAACGTGG+TGG | 0.753877 | 8.4:-1216931 | None:intergenic |
| TGGTAACATACCCTACAACG+TGG | 0.797593 | 8.4:-1216934 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTAAATAAAGTTCT+AGG | - | chr8.4:1216342-1216361 | None:intergenic | 10.0% |
| !! | AAATATTTATAATGATCCAA+CGG | - | chr8.4:1216138-1216157 | None:intergenic | 15.0% |
| !! | CACGACATAATTTATAAAAT+TGG | - | chr8.4:1216518-1216537 | None:intergenic | 20.0% |
| !! | GTGTTAGTACTTTATAATTA+GGG | + | chr8.4:1216535-1216554 | MS.gene96299:intron | 20.0% |
| ! | AACAGGATAATACAATCATA+TGG | - | chr8.4:1216390-1216409 | None:intergenic | 25.0% |
| ! | ACTCTCTATTATCAAGAATT+TGG | - | chr8.4:1216263-1216282 | None:intergenic | 25.0% |
| ! | CGTGTTAGTACTTTATAATT+AGG | + | chr8.4:1216534-1216553 | MS.gene96299:intron | 25.0% |
| ! | TATGATTGTATTATCCTGTT+TGG | + | chr8.4:1216390-1216409 | MS.gene96299:intron | 25.0% |
| !! | ATTCTTAATTTTCAGACACA+TGG | + | chr8.4:1216599-1216618 | MS.gene96299:intron | 25.0% |
| !! | TGTAAGTTCATACTGTTTTA+AGG | + | chr8.4:1216071-1216090 | MS.gene96299:intron | 25.0% |
| !!! | AGTTCTAAATGCAATAAGTT+GGG | + | chr8.4:1216622-1216641 | MS.gene96299:CDS | 25.0% |
| !!! | ATGTTTGAAGTATATGCTTT+TGG | - | chr8.4:1215766-1215785 | None:intergenic | 25.0% |
| !!! | ATGTTTGGTTTTTACATGAT+TGG | - | chr8.4:1215516-1215535 | None:intergenic | 25.0% |
| !!! | TGTTTGAAGTATATGCTTTT+GGG | - | chr8.4:1215765-1215784 | None:intergenic | 25.0% |
| !!! | TGTTTGGTTTTTACATGATT+GGG | - | chr8.4:1215515-1215534 | None:intergenic | 25.0% |
| AATAACTGCAACAAATAGGT+GGG | + | chr8.4:1215651-1215670 | MS.gene96299:CDS | 30.0% | |
| ATCATTATGTGTTTCGATTG+TGG | + | chr8.4:1216283-1216302 | MS.gene96299:intron | 30.0% | |
| CATGCTTACATTGGTATTAT+TGG | + | chr8.4:1217037-1217056 | MS.gene96299:CDS | 30.0% | |
| GTTTGTAATGCTAATGCTTA+TGG | - | chr8.4:1216957-1216976 | None:intergenic | 30.0% | |
| TCCAGTAAAATCTCAACTTA+TGG | - | chr8.4:1216904-1216923 | None:intergenic | 30.0% | |
| TGGTCATAATGTAATTGCAT+AGG | + | chr8.4:1216303-1216322 | MS.gene96299:intron | 30.0% | |
| ! | ACACCTCAAATTTAAAGTGT+CGG | - | chr8.4:1216429-1216448 | None:intergenic | 30.0% |
| ! | AGCATTACAAACGTTTTCAA+AGG | + | chr8.4:1216965-1216984 | MS.gene96299:CDS | 30.0% |
| ! | AGTAATAGCAAGGTATTTGA+AGG | + | chr8.4:1216667-1216686 | MS.gene96299:CDS | 30.0% |
| ! | ATTGGTATTATTGGTGCTTT+GGG | + | chr8.4:1217046-1217065 | MS.gene96299:CDS | 30.0% |
| ! | GAATTTTTACACAAAACCGT+TGG | + | chr8.4:1216119-1216138 | MS.gene96299:intron | 30.0% |
| ! | GCATTACAAACGTTTTCAAA+GGG | + | chr8.4:1216966-1216985 | MS.gene96299:CDS | 30.0% |
| ! | GTTCTAAATGCAATAAGTTG+GGG | + | chr8.4:1216623-1216642 | MS.gene96299:CDS | 30.0% |
| !! | AAAGTTCTAGGATTGTGATA+TGG | - | chr8.4:1216330-1216349 | None:intergenic | 30.0% |
| !! | ACCATAAGTTGAGATTTTAC+TGG | + | chr8.4:1216900-1216919 | MS.gene96299:CDS | 30.0% |
| !! | ATAGTTGGATTATCTGGTTT+TGG | + | chr8.4:1216752-1216771 | MS.gene96299:CDS | 30.0% |
| !! | CTTTGTTGTTTGAGAATGTT+TGG | - | chr8.4:1215531-1215550 | None:intergenic | 30.0% |
| !! | GAGTTCTAAATGCAATAAGT+TGG | + | chr8.4:1216621-1216640 | MS.gene96299:CDS | 30.0% |
| !!! | AAGTGTTTGCTCTATTTTTG+AGG | + | chr8.4:1216867-1216886 | MS.gene96299:CDS | 30.0% |
| AACAATAGCAAGTGCTCTAT+GGG | - | chr8.4:1216825-1216844 | None:intergenic | 35.0% | |
| AACCTCATTATTCTGATACG+TGG | - | chr8.4:1215851-1215870 | None:intergenic | 35.0% | |
| ACACCGACACTTTAAATTTG+AGG | + | chr8.4:1216423-1216442 | MS.gene96299:intron | 35.0% | |
| ACCAGAAACAGGATAACTAA+TGG | - | chr8.4:1215821-1215840 | None:intergenic | 35.0% | |
| ACCAGATAATCCAACTATGT+AGG | - | chr8.4:1216750-1216769 | None:intergenic | 35.0% | |
| ATCTTCTCACCAAAACTCTA+AGG | + | chr8.4:1215978-1215997 | MS.gene96299:CDS | 35.0% | |
| CAACTTGGTACTTACATATG+TGG | + | chr8.4:1216489-1216508 | MS.gene96299:intron | 35.0% | |
| CACATATGTAAGTACCAAGT+TGG | - | chr8.4:1216491-1216510 | None:intergenic | 35.0% | |
| CTCAACTTATGGTCTTTGTT+TGG | - | chr8.4:1216893-1216912 | None:intergenic | 35.0% | |
| CTGGAATAACTGCAACAAAT+AGG | + | chr8.4:1215647-1215666 | MS.gene96299:CDS | 35.0% | |
| GAATAACTGCAACAAATAGG+TGG | + | chr8.4:1215650-1215669 | MS.gene96299:CDS | 35.0% | |
| TATGCTACTCAAAACACACA+AGG | - | chr8.4:1215470-1215489 | None:intergenic | 35.0% | |
| TCCATTAGTTATCCTGTTTC+TGG | + | chr8.4:1215817-1215836 | MS.gene96299:CDS | 35.0% | |
| TGCTATTGTTCTTGTAACCT+TGG | + | chr8.4:1216835-1216854 | MS.gene96299:CDS | 35.0% | |
| ! | AAGACTTCAGATGGTGTTAA+TGG | + | chr8.4:1217136-1217155 | MS.gene96299:CDS | 35.0% |
| ! | CATTGGTATTATTGGTGCTT+TGG | + | chr8.4:1217045-1217064 | MS.gene96299:CDS | 35.0% |
| ! | TTCAAAGGGTTTGAAGCATT+GGG | + | chr8.4:1216980-1216999 | MS.gene96299:CDS | 35.0% |
| ! | TTGGTATTATTGGTGCTTTG+GGG | + | chr8.4:1217047-1217066 | MS.gene96299:CDS | 35.0% |
| ! | TTTCAAAGGGTTTGAAGCAT+TGG | + | chr8.4:1216979-1216998 | MS.gene96299:CDS | 35.0% |
| !! | AGTTTTGGTGAGAAGATTCA+TGG | - | chr8.4:1215975-1215994 | None:intergenic | 35.0% |
| !!! | AAGCATTGGGAGATTTTGTA+GGG | + | chr8.4:1216993-1217012 | MS.gene96299:CDS | 35.0% |
| AAACACTTGAAGAGTTGCCA+AGG | - | chr8.4:1216855-1216874 | None:intergenic | 40.0% | |
| AAACTCGGTAGTGATTCAGA+GGG | + | chr8.4:1216785-1216804 | MS.gene96299:CDS | 40.0% | |
| AAGAGGTTGTTCCATTTGGA+AGG | - | chr8.4:1215894-1215913 | None:intergenic | 40.0% | |
| AATATCTACCACCACGTTGT+AGG | + | chr8.4:1216923-1216942 | MS.gene96299:CDS | 40.0% | |
| ACATTGTAGACACAAGCACA+CGG | + | chr8.4:1215782-1215801 | MS.gene96299:CDS | 40.0% | |
| ACCAAAGAGGTTGTTCCATT+TGG | - | chr8.4:1215898-1215917 | None:intergenic | 40.0% | |
| AGAGGTTGTTCCATTTGGAA+GGG | - | chr8.4:1215893-1215912 | None:intergenic | 40.0% | |
| ATATCTACCACCACGTTGTA+GGG | + | chr8.4:1216924-1216943 | MS.gene96299:CDS | 40.0% | |
| ATGTGAAGATAGAACCAAGC+AGG | - | chr8.4:1216710-1216729 | None:intergenic | 40.0% | |
| GAACAATAGCAAGTGCTCTA+TGG | - | chr8.4:1216826-1216845 | None:intergenic | 40.0% | |
| GACATAGCATACATACACAC+TGG | + | chr8.4:1215628-1215647 | MS.gene96299:CDS | 40.0% | |
| GATTCATGGCTATGTTCTTG+AGG | - | chr8.4:1215961-1215980 | None:intergenic | 40.0% | |
| GCCTACATAGTTGGATTATC+TGG | + | chr8.4:1216746-1216765 | MS.gene96299:CDS | 40.0% | |
| GTTAATGGAGCAAATGGCTA+TGG | + | chr8.4:1217151-1217170 | MS.gene96299:CDS | 40.0% | |
| TCCAAATGGAACAACCTCTT+TGG | + | chr8.4:1215894-1215913 | MS.gene96299:CDS | 40.0% | |
| TGCCACGTATCAGAATAATG+AGG | + | chr8.4:1215846-1215865 | MS.gene96299:CDS | 40.0% | |
| TGGTCATACGATGAAACAAG+TGG | + | chr8.4:1215598-1215617 | MS.gene96299:CDS | 40.0% | |
| TGGTTCATGTATGGCAAGAT+GGG | + | chr8.4:1215914-1215933 | MS.gene96299:CDS | 40.0% | |
| TGTGAAGATAGAACCAAGCA+GGG | - | chr8.4:1216709-1216728 | None:intergenic | 40.0% | |
| TTGCCATACATGAACCAAAG+AGG | - | chr8.4:1215911-1215930 | None:intergenic | 40.0% | |
| TTGGTTCATGTATGGCAAGA+TGG | + | chr8.4:1215913-1215932 | MS.gene96299:CDS | 40.0% | |
| TTGTTTCATCGTATGACCAG+TGG | - | chr8.4:1215597-1215616 | None:intergenic | 40.0% | |
| ! | AACTGGAAGCATGCTTACAT+TGG | + | chr8.4:1217028-1217047 | MS.gene96299:CDS | 40.0% |
| ! | AGGGACGATTCTTGTTTGAT+TGG | + | chr8.4:1216554-1216573 | MS.gene96299:intron | 40.0% |
| ! | CAACCTCTTTGGTTCATGTA+TGG | + | chr8.4:1215905-1215924 | MS.gene96299:CDS | 40.0% |
| ! | CCAAAACTCTAAGGAAGTCT+TGG | + | chr8.4:1215987-1216006 | MS.gene96299:CDS | 40.0% |
| ! | CCAAGACTTCCTTAGAGTTT+TGG | - | chr8.4:1215990-1216009 | None:intergenic | 40.0% |
| ! | GAAGTCTTGGATCTTGTTTC+TGG | + | chr8.4:1216000-1216019 | MS.gene96299:CDS | 40.0% |
| ! | GATGGTGTTAATGGAGCAAA+TGG | + | chr8.4:1217145-1217164 | MS.gene96299:CDS | 40.0% |
| ! | TGGTATTATTGGTGCTTTGG+GGG | + | chr8.4:1217048-1217067 | MS.gene96299:CDS | 40.0% |
| !! | AACAAATAGGTGGGTTGCTT+GGG | + | chr8.4:1215660-1215679 | MS.gene96299:CDS | 40.0% |
| !! | AGCATTGGGAGATTTTGTAG+GGG | + | chr8.4:1216994-1217013 | MS.gene96299:CDS | 40.0% |
| !! | TGTAAGTACCAAGTTGGTGT+TGG | - | chr8.4:1216485-1216504 | None:intergenic | 40.0% |
| !! | TTTGGTACTGGTCTCAAACT+CGG | + | chr8.4:1216770-1216789 | MS.gene96299:CDS | 40.0% |
| !!! | GAAGCATTGGGAGATTTTGT+AGG | + | chr8.4:1216992-1217011 | MS.gene96299:CDS | 40.0% |
| !!! | GGATTATCTGGTTTTGGTAC+TGG | + | chr8.4:1216758-1216777 | MS.gene96299:CDS | 40.0% |
| ACATGATTGGGTTTGAGCTG+AGG | - | chr8.4:1215503-1215522 | None:intergenic | 45.0% | |
| CAAACTCGGTAGTGATTCAG+AGG | + | chr8.4:1216784-1216803 | MS.gene96299:CDS | 45.0% | |
| CAACAGGAGCAGTAATAGCA+AGG | + | chr8.4:1216657-1216676 | MS.gene96299:CDS | 45.0% | |
| CAAGTCTCTGCCTACATAGT+TGG | + | chr8.4:1216737-1216756 | MS.gene96299:CDS | 45.0% | |
| GCAGAGAACAAGACTTCAGA+TGG | + | chr8.4:1217127-1217146 | MS.gene96299:CDS | 45.0% | |
| GGTTCATGTATGGCAAGATG+GGG | + | chr8.4:1215915-1215934 | MS.gene96299:CDS | 45.0% | |
| GTGTCGCATAGATACCAAAC+AGG | - | chr8.4:1216407-1216426 | None:intergenic | 45.0% | |
| TAACATACCCTACAACGTGG+TGG | - | chr8.4:1216934-1216953 | None:intergenic | 45.0% | |
| TAGGGGATCGTTACAAGAAC+TGG | + | chr8.4:1217011-1217030 | MS.gene96299:CDS | 45.0% | |
| TCCACGTGTAAGCTTCCAAA+AGG | - | chr8.4:1217084-1217103 | None:intergenic | 45.0% | |
| TGGTAACATACCCTACAACG+TGG | - | chr8.4:1216937-1216956 | None:intergenic | 45.0% | |
| TTTCATCGTATGACCAGTGG+AGG | - | chr8.4:1215594-1215613 | None:intergenic | 45.0% | |
| TTTGGAAGCTTACACGTGGA+TGG | + | chr8.4:1217084-1217103 | MS.gene96299:CDS | 45.0% | |
| ! | ATATGCTTTTGGGCTTCCAC+TGG | - | chr8.4:1215755-1215774 | None:intergenic | 45.0% |
| ! | GCTACTTTGACCCTTCCAAA+TGG | + | chr8.4:1215880-1215899 | MS.gene96299:CDS | 45.0% |
| ! | GGTATTATTGGTGCTTTGGG+GGG | + | chr8.4:1217049-1217068 | MS.gene96299:CDS | 45.0% |
| !! | AGTACCAAGTTGGTGTTGGT+CGG | - | chr8.4:1216481-1216500 | None:intergenic | 45.0% |
| !! | CAACAAATAGGTGGGTTGCT+TGG | + | chr8.4:1215659-1215678 | MS.gene96299:CDS | 45.0% |
| !! | CTTGCTATTACTGCTCCTGT+TGG | - | chr8.4:1216659-1216678 | None:intergenic | 45.0% |
| !! | TCCTTTTGGAAGCTTACACG+TGG | + | chr8.4:1217080-1217099 | MS.gene96299:CDS | 45.0% |
| AACCAATCCCACTTGCAGCT+TGG | - | chr8.4:1216032-1216051 | None:intergenic | 50.0% | |
| ACAAGCACACGGTTGCAAGA+AGG | + | chr8.4:1215793-1215812 | MS.gene96299:CDS | 50.0% | |
| ACCAATCCCACTTGCAGCTT+GGG | - | chr8.4:1216031-1216050 | None:intergenic | 50.0% | |
| AGTTAACCTCGTACCTCCAC+TGG | + | chr8.4:1215578-1215597 | MS.gene96299:CDS | 50.0% | |
| ATAGAACCAAGCAGGGTCTG+CGG | - | chr8.4:1216702-1216721 | None:intergenic | 50.0% | |
| CAAAGCTTGTGCTCCGATCA+TGG | - | chr8.4:1215716-1215735 | None:intergenic | 50.0% | |
| CATGATCGGAGCACAAGCTT+TGG | + | chr8.4:1215714-1215733 | MS.gene96299:CDS | 50.0% | |
| CGGACTACACTAACACGTGT+TGG | - | chr8.4:1216461-1216480 | None:intergenic | 50.0% | |
| GTGGCAGACAAACCAGAAAC+AGG | - | chr8.4:1215832-1215851 | None:intergenic | 50.0% | |
| TAGTCCGACCAACACCAACT+TGG | + | chr8.4:1216474-1216493 | MS.gene96299:intron | 50.0% | |
| TGGGGAATCTTGATGCCAAC+AGG | + | chr8.4:1216641-1216660 | MS.gene96299:CDS | 50.0% | |
| ! | TGGAGGTACGAGGTTAACTG+TGG | - | chr8.4:1215577-1215596 | None:intergenic | 50.0% |
| !! | AAGGGTGCTGCTTGGATTGA+TGG | - | chr8.4:1215686-1215705 | None:intergenic | 50.0% |
| AATCCCACTTGCAGCTTGGG+AGG | - | chr8.4:1216028-1216047 | None:intergenic | 55.0% | |
| ACCCTTGACCCAGCCATGAT+CGG | + | chr8.4:1215700-1215719 | MS.gene96299:CDS | 55.0% | |
| CTTGTGCTCCGATCATGGCT+GGG | - | chr8.4:1215711-1215730 | None:intergenic | 55.0% | |
| GTACCTCCCAAGCTGCAAGT+GGG | + | chr8.4:1216022-1216041 | MS.gene96299:CDS | 55.0% | |
| GTGGCTATTCCACAAGCCAG+TGG | + | chr8.4:1215736-1215755 | MS.gene96299:CDS | 55.0% | |
| TCAAATCCGCAGACCCTGCT+TGG | + | chr8.4:1216693-1216712 | MS.gene96299:CDS | 55.0% | |
| TCCCAAGCTGCAAGTGGGAT+TGG | + | chr8.4:1216027-1216046 | MS.gene96299:CDS | 55.0% | |
| TCCGATCATGGCTGGGTCAA+GGG | - | chr8.4:1215704-1215723 | None:intergenic | 55.0% | |
| ! | GATCGGAGCACAAGCTTTGG+TGG | + | chr8.4:1215717-1215736 | MS.gene96299:CDS | 55.0% |
| ! | GTATGACCAGTGGAGGTACG+AGG | - | chr8.4:1215587-1215606 | None:intergenic | 55.0% |
| !! | TTTGGGCTTCCACTGGCTTG+TGG | - | chr8.4:1215748-1215767 | None:intergenic | 55.0% |
| CTCCGATCATGGCTGGGTCA+AGG | - | chr8.4:1215705-1215724 | None:intergenic | 60.0% | |
| GCTTGTGCTCCGATCATGGC+TGG | - | chr8.4:1215712-1215731 | None:intergenic | 60.0% | |
| GGTACCTCCCAAGCTGCAAG+TGG | + | chr8.4:1216021-1216040 | MS.gene96299:CDS | 60.0% | |
| !!! | GGGGGGCATTGCTGTCCTTT+TGG | + | chr8.4:1217066-1217085 | MS.gene96299:CDS | 60.0% |
| !! | GCTGGGTCAAGGGTGCTGCT+TGG | - | chr8.4:1215694-1215713 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 1215448 | 1217189 | 1215448 | ID=MS.gene96299 |
| chr8.4 | mRNA | 1215448 | 1217189 | 1215448 | ID=MS.gene96299.t1;Parent=MS.gene96299 |
| chr8.4 | exon | 1215448 | 1216071 | 1215448 | ID=MS.gene96299.t1.exon1;Parent=MS.gene96299.t1 |
| chr8.4 | CDS | 1215448 | 1216071 | 1215448 | ID=cds.MS.gene96299.t1;Parent=MS.gene96299.t1 |
| chr8.4 | exon | 1216614 | 1217189 | 1216614 | ID=MS.gene96299.t1.exon2;Parent=MS.gene96299.t1 |
| chr8.4 | CDS | 1216614 | 1217189 | 1216614 | ID=cds.MS.gene96299.t1;Parent=MS.gene96299.t1 |
| Gene Sequence |
| Protein sequence |
