Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45607.t1 | AFK36857.1 | 99 | 105 | 1 | 0 | 23 | 127 | 146 | 250 | 1.20E-55 | 225.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45607.t1 | G7JF90 | 99.0 | 105 | 1 | 0 | 23 | 127 | 146 | 250 | 8.7e-56 | 225.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene45607 | 0.823402 | 1.41E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene45607 | 0.908754 | 1.21E-81 | -1.69E-46 |
| MS.gene049217 | MS.gene45607 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene45607 | 0.866144 | 3.53E-65 | -1.69E-46 |
| MS.gene049251 | MS.gene45607 | -0.811606 | 6.44E-51 | -1.69E-46 |
| MS.gene049257 | MS.gene45607 | 0.836111 | 1.13E-56 | -1.69E-46 |
| MS.gene049281 | MS.gene45607 | -0.805372 | 1.38E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene45607 | 0.850073 | 2.15E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene45607 | 0.831421 | 1.69E-55 | -1.69E-46 |
| MS.gene049373 | MS.gene45607 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene45607 | 0.85696 | 2.26E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene45607 | 0.864597 | 1.08E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene45607 | 0.803595 | 3.23E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene45607 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene45607 | 0.814663 | 1.37E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene45607 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene45607 | 0.898005 | 8.10E-77 | -1.69E-46 |
| MS.gene050315 | MS.gene45607 | 0.809958 | 1.46E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene45607 | 0.856192 | 3.80E-62 | -1.69E-46 |
| MS.gene050381 | MS.gene45607 | -0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene45607 | 0.815547 | 8.74E-52 | -1.69E-46 |
| MS.gene050479 | MS.gene45607 | -0.831385 | 1.72E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene45607 | 0.863257 | 2.83E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene45607 | 0.866615 | 2.50E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene45607 | 0.815551 | 8.72E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene45607 | 0.838187 | 3.34E-57 | -1.69E-46 |
| MS.gene050547 | MS.gene45607 | -0.837218 | 5.92E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene45607 | 0.886823 | 2.45E-72 | -1.69E-46 |
| MS.gene050593 | MS.gene45607 | 0.818386 | 2.01E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene45607 | 0.849977 | 2.29E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene45607 | 0.836065 | 1.16E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene45607 | 0.873257 | 1.69E-67 | -1.69E-46 |
| MS.gene050720 | MS.gene45607 | -0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene45607 | 0.866237 | 3.30E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene45607 | 0.831604 | 1.52E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene45607 | 0.870291 | 1.63E-66 | -1.69E-46 |
| MS.gene05081 | MS.gene45607 | 0.879965 | 8.10E-70 | -1.69E-46 |
| MS.gene050868 | MS.gene45607 | 0.8738 | 1.11E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene45607 | 0.871409 | 6.98E-67 | -1.69E-46 |
| MS.gene050904 | MS.gene45607 | 0.843593 | 1.27E-58 | -1.69E-46 |
| MS.gene050937 | MS.gene45607 | -0.811979 | 5.34E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene45607 | 0.858276 | 9.21E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene45607 | 0.824627 | 7.29E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene45607 | -0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene45607 | -0.807515 | 4.87E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene45607 | 0.813246 | 2.82E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene45607 | 0.858674 | 7.01E-63 | -1.69E-46 |
| MS.gene051364 | MS.gene45607 | -0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene45607 | -0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene45607 | -0.81291 | 3.34E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene45607 | 0.810073 | 1.38E-50 | -1.69E-46 |
| MS.gene051552 | MS.gene45607 | -0.826954 | 2.04E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene45607 | -0.817319 | 3.51E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene45607 | 0.825345 | 4.93E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene45607 | 0.809137 | 2.20E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene45607 | 0.811883 | 5.60E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene45607 | 0.904461 | 1.20E-79 | -1.69E-46 |
| MS.gene051858 | MS.gene45607 | 0.825361 | 4.89E-54 | -1.69E-46 |
| MS.gene051941 | MS.gene45607 | 0.806493 | 8.01E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene45607 | -0.808071 | 3.71E-50 | -1.69E-46 |
| MS.gene051973 | MS.gene45607 | -0.850779 | 1.36E-60 | -1.69E-46 |
| MS.gene052015 | MS.gene45607 | -0.873841 | 1.08E-67 | -1.69E-46 |
| MS.gene052129 | MS.gene45607 | -0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene45607 | 0.861601 | 9.15E-64 | -1.69E-46 |
| MS.gene052346 | MS.gene45607 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene45607 | -0.806873 | 6.66E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene45607 | 0.839959 | 1.16E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene45607 | 0.849124 | 3.95E-60 | -1.69E-46 |
| MS.gene052494 | MS.gene45607 | -0.849294 | 3.55E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene45607 | 0.863769 | 1.96E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene45607 | 0.899039 | 2.94E-77 | -1.69E-46 |
| MS.gene052505 | MS.gene45607 | 0.848558 | 5.68E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene45607 | 0.839582 | 1.45E-57 | -1.69E-46 |
| MS.gene052606 | MS.gene45607 | -0.834918 | 2.27E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene45607 | 0.842586 | 2.36E-58 | -1.69E-46 |
| MS.gene052820 | MS.gene45607 | 0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene45607 | 0.824834 | 6.51E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene45607 | 0.899018 | 3.00E-77 | -1.69E-46 |
| MS.gene052825 | MS.gene45607 | 0.90731 | 5.82E-81 | -1.69E-46 |
| MS.gene052870 | MS.gene45607 | 0.821096 | 4.84E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene45607 | 0.843406 | 1.43E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene45607 | 0.84579 | 3.26E-59 | -1.69E-46 |
| MS.gene052982 | MS.gene45607 | 0.814939 | 1.19E-51 | -1.69E-46 |
| MS.gene053097 | MS.gene45607 | -0.854641 | 1.07E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene45607 | 0.89295 | 9.89E-75 | -1.69E-46 |
| MS.gene053207 | MS.gene45607 | 0.816011 | 6.89E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene45607 | 0.820823 | 5.60E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene45607 | 0.820805 | 5.65E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene45607 | -0.801794 | 7.61E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene45607 | -0.819714 | 1.00E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene45607 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene45607 | 0.880601 | 4.80E-70 | -1.69E-46 |
| MS.gene053480 | MS.gene45607 | 0.868643 | 5.61E-66 | -1.69E-46 |
| MS.gene053574 | MS.gene45607 | 0.829894 | 3.99E-55 | -1.69E-46 |
| MS.gene053579 | MS.gene45607 | 0.826904 | 2.10E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene45607 | 0.809199 | 2.13E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene45607 | 0.841921 | 3.54E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene45607 | 0.896485 | 3.53E-76 | -1.69E-46 |
| MS.gene054107 | MS.gene45607 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene054343 | MS.gene45607 | 0.886347 | 3.70E-72 | -1.69E-46 |
| MS.gene054344 | MS.gene45607 | 0.914385 | 2.04E-84 | -1.69E-46 |
| MS.gene054408 | MS.gene45607 | 0.835706 | 1.44E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene45607 | 0.838578 | 2.65E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene45607 | 0.844788 | 6.08E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene45607 | 0.81588 | 7.37E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene45607 | -0.848681 | 5.25E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene45607 | 0.910633 | 1.51E-82 | -1.69E-46 |
| MS.gene054851 | MS.gene45607 | -0.84213 | 3.12E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene45607 | -0.875115 | 3.97E-68 | -1.69E-46 |
| MS.gene054927 | MS.gene45607 | 0.849079 | 4.07E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene45607 | 0.809671 | 1.69E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene45607 | 0.845385 | 4.20E-59 | -1.69E-46 |
| MS.gene054959 | MS.gene45607 | -0.820989 | 5.12E-53 | -1.69E-46 |
| MS.gene055158 | MS.gene45607 | -0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene055159 | MS.gene45607 | -0.809926 | 1.49E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene45607 | 0.85504 | 8.23E-62 | -1.69E-46 |
| MS.gene055224 | MS.gene45607 | 0.811585 | 6.50E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene45607 | 0.830556 | 2.75E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene45607 | 0.856589 | 2.90E-62 | -1.69E-46 |
| MS.gene055370 | MS.gene45607 | 0.825249 | 5.20E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene45607 | 0.882431 | 1.05E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene45607 | 0.917673 | 3.98E-86 | -1.69E-46 |
| MS.gene055616 | MS.gene45607 | -0.817856 | 2.65E-52 | -1.69E-46 |
| MS.gene055719 | MS.gene45607 | -0.848439 | 6.12E-60 | -1.69E-46 |
| MS.gene055731 | MS.gene45607 | -0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene45607 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene45607 | 0.869476 | 3.01E-66 | -1.69E-46 |
| MS.gene055750 | MS.gene45607 | 0.845856 | 3.13E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene45607 | 0.856135 | 3.95E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene45607 | 0.901134 | 3.64E-78 | -1.69E-46 |
| MS.gene055941 | MS.gene45607 | 0.852298 | 5.06E-61 | -1.69E-46 |
| MS.gene055977 | MS.gene45607 | -0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene45607 | 0.822917 | 1.83E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene45607 | 0.82243 | 2.38E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene45607 | -0.800356 | 1.50E-48 | -1.69E-46 |
| MS.gene056266 | MS.gene45607 | 0.818046 | 2.40E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene45607 | 0.824493 | 7.83E-54 | -1.69E-46 |
| MS.gene056409 | MS.gene45607 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene45607 | 0.87418 | 8.26E-68 | -1.69E-46 |
| MS.gene056510 | MS.gene45607 | 0.852567 | 4.24E-61 | -1.69E-46 |
| MS.gene056550 | MS.gene45607 | -0.816208 | 6.23E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene45607 | -0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene45607 | -0.805965 | 1.03E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene45607 | 0.84896 | 4.39E-60 | -1.69E-46 |
| MS.gene056633 | MS.gene45607 | 0.8007 | 1.27E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene45607 | 0.822638 | 2.13E-53 | -1.69E-46 |
| MS.gene056678 | MS.gene45607 | -0.805555 | 1.26E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene45607 | 0.849952 | 2.32E-60 | -1.69E-46 |
| MS.gene056694 | MS.gene45607 | -0.820161 | 7.94E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene45607 | -0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene45607 | -0.804128 | 2.51E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene45607 | 0.86438 | 1.27E-64 | -1.69E-46 |
| MS.gene056946 | MS.gene45607 | 0.822776 | 1.98E-53 | -1.69E-46 |
| MS.gene056988 | MS.gene45607 | -0.846637 | 1.92E-59 | -1.69E-46 |
| MS.gene057014 | MS.gene45607 | -0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene45607 | 0.845155 | 4.84E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene45607 | 0.807251 | 5.54E-50 | -1.69E-46 |
| MS.gene057081 | MS.gene45607 | -0.810398 | 1.18E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene45607 | 0.849638 | 2.84E-60 | -1.69E-46 |
| MS.gene057261 | MS.gene45607 | -0.81519 | 1.05E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene45607 | 0.874144 | 8.50E-68 | -1.69E-46 |
| MS.gene057416 | MS.gene45607 | 0.804955 | 1.68E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene45607 | 0.910996 | 1.00E-82 | -1.69E-46 |
| MS.gene057768 | MS.gene45607 | -0.804857 | 1.77E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene45607 | 0.863846 | 1.86E-64 | -1.69E-46 |
| MS.gene057856 | MS.gene45607 | 0.816208 | 6.22E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene45607 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene45607 | 0.806901 | 6.57E-50 | -1.69E-46 |
| MS.gene058076 | MS.gene45607 | -0.807285 | 5.45E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene45607 | 0.84 | 1.13E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene45607 | -0.865593 | 5.28E-65 | -1.69E-46 |
| MS.gene058338 | MS.gene45607 | 0.864252 | 1.39E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene45607 | 0.899492 | 1.88E-77 | -1.69E-46 |
| MS.gene058382 | MS.gene45607 | -0.810712 | 1.01E-50 | -1.69E-46 |
| MS.gene058418 | MS.gene45607 | -0.862739 | 4.09E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene45607 | 0.864477 | 1.18E-64 | -1.69E-46 |
| MS.gene058444 | MS.gene45607 | 0.834994 | 2.17E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene45607 | 0.888607 | 5.08E-73 | -1.69E-46 |
| MS.gene058603 | MS.gene45607 | -0.826412 | 2.75E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene45607 | 0.801127 | 1.04E-48 | -1.69E-46 |
| MS.gene058752 | MS.gene45607 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene45607 | 0.830305 | 3.17E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene45607 | 0.904793 | 8.47E-80 | -1.69E-46 |
| MS.gene05883 | MS.gene45607 | 0.800733 | 1.26E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene45607 | 0.857523 | 1.54E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene45607 | 0.924866 | 3.97E-90 | -1.69E-46 |
| MS.gene059103 | MS.gene45607 | -0.867474 | 1.33E-65 | -1.69E-46 |
| MS.gene05912 | MS.gene45607 | 0.805137 | 1.54E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene45607 | 0.910196 | 2.46E-82 | -1.69E-46 |
| MS.gene05926 | MS.gene45607 | -0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene059303 | MS.gene45607 | 0.87304 | 2.00E-67 | -1.69E-46 |
| MS.gene059304 | MS.gene45607 | -0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene45607 | 0.825879 | 3.69E-54 | -1.69E-46 |
| MS.gene059480 | MS.gene45607 | -0.870373 | 1.53E-66 | -1.69E-46 |
| MS.gene059512 | MS.gene45607 | 0.844908 | 5.65E-59 | -1.69E-46 |
| MS.gene05960 | MS.gene45607 | -0.859254 | 4.70E-63 | -1.69E-46 |
| MS.gene059667 | MS.gene45607 | 0.848521 | 5.81E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene45607 | 0.862794 | 3.94E-64 | -1.69E-46 |
| MS.gene059718 | MS.gene45607 | 0.868534 | 6.08E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene45607 | 0.873756 | 1.15E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene45607 | 0.820565 | 6.41E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene45607 | 0.821753 | 3.41E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene45607 | 0.844078 | 9.45E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene45607 | 0.823842 | 1.11E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene45607 | 0.824631 | 7.27E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene45607 | 0.868903 | 4.62E-66 | -1.69E-46 |
| MS.gene060087 | MS.gene45607 | -0.824503 | 7.79E-54 | -1.69E-46 |
| MS.gene06027 | MS.gene45607 | 0.861666 | 8.74E-64 | -1.69E-46 |
| MS.gene060358 | MS.gene45607 | -0.823779 | 1.15E-53 | -1.69E-46 |
| MS.gene060405 | MS.gene45607 | -0.802456 | 5.56E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene45607 | 0.8132 | 2.89E-51 | -1.69E-46 |
| MS.gene060593 | MS.gene45607 | -0.823929 | 1.06E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene45607 | -0.817216 | 3.70E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene45607 | 0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene45607 | 0.873985 | 9.61E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene45607 | 0.83102 | 2.11E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene45607 | 0.891804 | 2.84E-74 | -1.69E-46 |
| MS.gene060835 | MS.gene45607 | 0.822108 | 2.83E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene45607 | 0.876729 | 1.11E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene45607 | 0.88133 | 2.63E-70 | -1.69E-46 |
| MS.gene061038 | MS.gene45607 | -0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene45607 | -0.850073 | 2.15E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene45607 | 0.856111 | 4.01E-62 | -1.69E-46 |
| MS.gene061231 | MS.gene45607 | 0.845286 | 4.47E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45607.t1 | MTR_4g097500 | 98.113 | 106 | 2 | 0 | 23 | 128 | 146 | 251 | 4.41e-74 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45607.t1 | AT5G65840 | 74.528 | 106 | 27 | 0 | 23 | 128 | 170 | 275 | 1.56e-55 | 174 |
Find 32 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACACTGGCTGGGTTGAAAA+AGG | 0.282027 | 8.4:+25120218 | None:intergenic |
| TTTGACCTCTACTATGGATT+TGG | 0.321070 | 8.4:-25120246 | MS.gene45607:CDS |
| GGAGGGATGTTTGTGTTTAG+AGG | 0.357019 | 8.4:-25119862 | MS.gene45607:CDS |
| AACTCACAGAAACTTCCTTT+TGG | 0.368762 | 8.4:+25120913 | None:intergenic |
| TAAAGACAATCCATTGGAAA+TGG | 0.422792 | 8.4:+25120385 | None:intergenic |
| AAGGTAAAGCTTACACTGGC+TGG | 0.424360 | 8.4:+25120207 | None:intergenic |
| ATACAGTACAGTTAAGCAAC+AGG | 0.447939 | 8.4:+25119754 | None:intergenic |
| CCGTGCATTACCTTACGGTC+AGG | 0.448777 | 8.4:+25120355 | None:intergenic |
| GTTTGCCTTTGTGAGGGAGG+TGG | 0.453478 | 8.4:-25120936 | MS.gene45607:CDS |
| AGGGTTTGCCTTTGTGAGGG+AGG | 0.474618 | 8.4:-25120939 | MS.gene45607:CDS |
| GAGGGATGTTTGTGTTTAGA+GGG | 0.508209 | 8.4:-25119861 | MS.gene45607:CDS |
| TGTTCAGTTACCATTTCCAA+TGG | 0.515281 | 8.4:-25120395 | MS.gene45607:intron |
| TCTCACCTTCACCATATGGT+GGG | 0.516049 | 8.4:-25120978 | None:intergenic |
| AAAACACCACTTCTATCATC+TGG | 0.525139 | 8.4:+25119994 | None:intergenic |
| CGTGCATTACCTTACGGTCA+GGG | 0.525659 | 8.4:+25120356 | None:intergenic |
| TGGGTGGAGTGTGTAGAGGA+AGG | 0.526759 | 8.4:-25120959 | MS.gene45607:CDS |
| TTGTGAGGGAGGTGGCCAAA+AGG | 0.532373 | 8.4:-25120928 | MS.gene45607:CDS |
| GGGTGGAGTGTGTAGAGGAA+GGG | 0.535800 | 8.4:-25120958 | MS.gene45607:CDS |
| GGAAGGGTTTGCCTTTGTGA+GGG | 0.535969 | 8.4:-25120942 | MS.gene45607:CDS |
| AGGAAGGGTTTGCCTTTGTG+AGG | 0.551194 | 8.4:-25120943 | MS.gene45607:CDS |
| CACCTTCACCATATGGTGGG+TGG | 0.557233 | 8.4:-25120975 | None:intergenic |
| AGGTAAAGCTTACACTGGCT+GGG | 0.557305 | 8.4:+25120208 | None:intergenic |
| TTATGCAGACCCTGACCGTA+AGG | 0.565546 | 8.4:-25120365 | MS.gene45607:intron |
| GGAAAGAGCTATTATATGCA+AGG | 0.568553 | 8.4:-25119840 | MS.gene45607:CDS |
| GCAAGGAAAGACGAAGGCAC+AGG | 0.589567 | 8.4:-25119823 | MS.gene45607:CDS |
| TCTGCATAAAGACAATCCAT+TGG | 0.596451 | 8.4:+25120379 | None:intergenic |
| TTTGGCCACCTCCCTCACAA+AGG | 0.623186 | 8.4:+25120931 | None:intergenic |
| GCCACTCCAGATGATAGAAG+TGG | 0.626798 | 8.4:-25120000 | MS.gene45607:CDS |
| ACCACTTCTATCATCTGGAG+TGG | 0.632768 | 8.4:+25119999 | None:intergenic |
| TTCGGCCAAATCCATAGTAG+AGG | 0.635276 | 8.4:+25120241 | None:intergenic |
| ATGGTGGGTGGAGTGTGTAG+AGG | 0.681847 | 8.4:-25120963 | MS.gene45607:CDS |
| TTATATGCAAGGAAAGACGA+AGG | 0.699801 | 8.4:-25119829 | MS.gene45607:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAAAAACTTAAAATTAT+TGG | + | chr8.4:25120021-25120040 | None:intergenic | 10.0% |
| !! | CTATAATTAAAACTCATAAA+TGG | + | chr8.4:25119906-25119925 | None:intergenic | 15.0% |
| !! | TAATTTACGCAATTATTATA+TGG | - | chr8.4:25120250-25120269 | MS.gene45607:CDS | 15.0% |
| !!! | AATATTTTACTTTACAACTT+GGG | - | chr8.4:25120807-25120826 | MS.gene45607:intron | 15.0% |
| !!! | GTAAAGAATTTTATCAATTT+AGG | + | chr8.4:25120836-25120855 | None:intergenic | 15.0% |
| !!! | TAATATTTTACTTTACAACT+TGG | - | chr8.4:25120806-25120825 | MS.gene45607:intron | 15.0% |
| !! | TTTAAATTCACTTCATTGAA+GGG | - | chr8.4:25120121-25120140 | MS.gene45607:intron | 20.0% |
| !!! | AAAATTCTTTACATTTTGTC+AGG | - | chr8.4:25120844-25120863 | MS.gene45607:intron | 20.0% |
| !!! | AAATTCTTTACATTTTGTCA+GGG | - | chr8.4:25120845-25120864 | MS.gene45607:intron | 20.0% |
| !!! | TTTTAAATTCACTTCATTGA+AGG | - | chr8.4:25120120-25120139 | MS.gene45607:intron | 20.0% |
| !!! | TTTTTGTTTCAAGTTATCTT+GGG | - | chr8.4:25120053-25120072 | MS.gene45607:CDS | 20.0% |
| ! | AAAATGATATTAACAGGCAA+AGG | - | chr8.4:25120652-25120671 | MS.gene45607:intron | 25.0% |
| ! | AAACTTAAAATTATTGGCCA+TGG | + | chr8.4:25120015-25120034 | None:intergenic | 25.0% |
| ! | GACTTCAAAATGATATTAAC+AGG | - | chr8.4:25120646-25120665 | MS.gene45607:intron | 25.0% |
| !! | AGTATGGATGATCATTTTAA+TGG | - | chr8.4:25120178-25120197 | MS.gene45607:intron | 25.0% |
| !! | CTGATATTTTCTTTTTCTAC+TGG | - | chr8.4:25120303-25120322 | MS.gene45607:intron | 25.0% |
| !! | TTTACAAAATGAGTTCTAGT+AGG | + | chr8.4:25120418-25120437 | None:intergenic | 25.0% |
| !!! | AATTTTTTTGACCTCTACTA+TGG | - | chr8.4:25120476-25120495 | MS.gene45607:intron | 25.0% |
| !!! | GATGATCATTTTAATGGATA+TGG | - | chr8.4:25120184-25120203 | MS.gene45607:intron | 25.0% |
| !!! | GTTTTTGTTTCAAGTTATCT+TGG | - | chr8.4:25120052-25120071 | MS.gene45607:CDS | 25.0% |
| AAAATTGTATGCCTGAAAGA+AGG | + | chr8.4:25120462-25120481 | None:intergenic | 30.0% | |
| AACATCAAAAACATCGTCTA+AGG | + | chr8.4:25120942-25120961 | None:intergenic | 30.0% | |
| ACATCAAAAACATCGTCTAA+GGG | + | chr8.4:25120941-25120960 | None:intergenic | 30.0% | |
| ATATTTACCAGCATGCAAAA+TGG | + | chr8.4:25120619-25120638 | None:intergenic | 30.0% | |
| ATTTGATGCTTTGCAAAAAG+CGG | - | chr8.4:25120685-25120704 | MS.gene45607:intron | 30.0% | |
| CATAAATGGCAAAAACAAAC+AGG | + | chr8.4:25119892-25119911 | None:intergenic | 30.0% | |
| TAAAGACAATCCATTGGAAA+TGG | + | chr8.4:25120346-25120365 | None:intergenic | 30.0% | |
| ! | TTGTATTTCAGAAAAGTGCA+AGG | + | chr8.4:25120543-25120562 | None:intergenic | 30.0% |
| AAAAAGAGGTAAGTCGTACA+TGG | + | chr8.4:25119977-25119996 | None:intergenic | 35.0% | |
| AAAACACCACTTCTATCATC+TGG | + | chr8.4:25120737-25120756 | None:intergenic | 35.0% | |
| AATTAAACCACAAACCGTTG+AGG | + | chr8.4:25120102-25120121 | None:intergenic | 35.0% | |
| ATCAAAAACATCGTCTAAGG+GGG | + | chr8.4:25120939-25120958 | None:intergenic | 35.0% | |
| CATCAAAAACATCGTCTAAG+GGG | + | chr8.4:25120940-25120959 | None:intergenic | 35.0% | |
| GCAGGTTTGATACATTAATC+TGG | - | chr8.4:25120760-25120779 | MS.gene45607:intron | 35.0% | |
| GGAAAGAGCTATTATATGCA+AGG | - | chr8.4:25120888-25120907 | MS.gene45607:intron | 35.0% | |
| GGTTTGATACATTAATCTGG+TGG | - | chr8.4:25120763-25120782 | MS.gene45607:intron | 35.0% | |
| TCAAGTATATTCTGCCTCAA+CGG | - | chr8.4:25120085-25120104 | MS.gene45607:intron | 35.0% | |
| TCAAGTTATCTTGGGTTACT+AGG | - | chr8.4:25120061-25120080 | MS.gene45607:CDS | 35.0% | |
| TCTGCATAAAGACAATCCAT+TGG | + | chr8.4:25120352-25120371 | None:intergenic | 35.0% | |
| TGTTCAGTTACCATTTCCAA+TGG | - | chr8.4:25120333-25120352 | MS.gene45607:intron | 35.0% | |
| TTATATGCAAGGAAAGACGA+AGG | - | chr8.4:25120899-25120918 | MS.gene45607:intron | 35.0% | |
| TTTGACCTCTACTATGGATT+TGG | - | chr8.4:25120482-25120501 | MS.gene45607:intron | 35.0% | |
| TTTGCATGCTGGTAAATATG+TGG | - | chr8.4:25120620-25120639 | MS.gene45607:intron | 35.0% | |
| ! | AACTCACAGAAACTTCCTTT+TGG | + | chr8.4:25119818-25119837 | None:intergenic | 35.0% |
| ! | ACAATTTCCATTTTGCATGC+TGG | - | chr8.4:25120609-25120628 | MS.gene45607:intron | 35.0% |
| ! | ATGTACGACTTACCTCTTTT+TGG | - | chr8.4:25119976-25119995 | MS.gene45607:intron | 35.0% |
| ! | TACCAATTTGGAACAATCAG+TGG | - | chr8.4:25119859-25119878 | MS.gene45607:CDS | 35.0% |
| ! | TCTTTACATTTTGTCAGGGA+GGG | - | chr8.4:25120849-25120868 | MS.gene45607:intron | 35.0% |
| ! | TTCTTTACATTTTGTCAGGG+AGG | - | chr8.4:25120848-25120867 | MS.gene45607:intron | 35.0% |
| AACCAATTTCGCCTTCTTTC+AGG | - | chr8.4:25120448-25120467 | MS.gene45607:intron | 40.0% | |
| ATCATCCATACTGCTATCCT+TGG | + | chr8.4:25120170-25120189 | None:intergenic | 40.0% | |
| ATTTGCCAAGGATAGCAGTA+TGG | - | chr8.4:25120162-25120181 | MS.gene45607:intron | 40.0% | |
| GAGGGATGTTTGTGTTTAGA+GGG | - | chr8.4:25120867-25120886 | MS.gene45607:intron | 40.0% | |
| GATATCCGTGCATTACCTTA+CGG | + | chr8.4:25120381-25120400 | None:intergenic | 40.0% | |
| TCTGTGTTGCAAATTTGCCA+AGG | - | chr8.4:25120150-25120169 | MS.gene45607:intron | 40.0% | |
| TTCCTACCTTCACCAAAAAG+AGG | + | chr8.4:25119991-25120010 | None:intergenic | 40.0% | |
| ! | AGCCACTGATTGTTCCAAAT+TGG | + | chr8.4:25119864-25119883 | None:intergenic | 40.0% |
| ! | CAGGGTAGGTTTTACCAATT+TGG | - | chr8.4:25119847-25119866 | MS.gene45607:CDS | 40.0% |
| !! | GACTTACCTCTTTTTGGTGA+AGG | - | chr8.4:25119982-25120001 | MS.gene45607:intron | 40.0% |
| !! | TACCTCTTTTTGGTGAAGGT+AGG | - | chr8.4:25119986-25120005 | MS.gene45607:intron | 40.0% |
| AAGGTAAAGCTTACACTGGC+TGG | + | chr8.4:25120524-25120543 | None:intergenic | 45.0% | |
| ACCACTTCTATCATCTGGAG+TGG | + | chr8.4:25120732-25120751 | None:intergenic | 45.0% | |
| GGAGGGATGTTTGTGTTTAG+AGG | - | chr8.4:25120866-25120885 | MS.gene45607:intron | 45.0% | |
| GTGCAAGGTAAAGCTTACAC+TGG | + | chr8.4:25120528-25120547 | None:intergenic | 45.0% | |
| TATTCTGCCTCAACGGTTTG+TGG | - | chr8.4:25120092-25120111 | MS.gene45607:intron | 45.0% | |
| TGCCTGAAAGAAGGCGAAAT+TGG | + | chr8.4:25120453-25120472 | None:intergenic | 45.0% | |
| TTCGGCCAAATCCATAGTAG+AGG | + | chr8.4:25120490-25120509 | None:intergenic | 45.0% | |
| TTGGTGAAGGTAGGAATCCA+TGG | - | chr8.4:25119995-25120014 | MS.gene45607:CDS | 45.0% | |
| ! | AGGTAAAGCTTACACTGGCT+GGG | + | chr8.4:25120523-25120542 | None:intergenic | 45.0% |
| ! | CTGTGAGTTGAAGAGATGCA+GGG | - | chr8.4:25119829-25119848 | MS.gene45607:CDS | 45.0% |
| ! | TACACTGGCTGGGTTGAAAA+AGG | + | chr8.4:25120513-25120532 | None:intergenic | 45.0% |
| ! | TAGAAGTGGTGTTTTGCAGC+AGG | - | chr8.4:25120742-25120761 | MS.gene45607:intron | 45.0% |
| ! | TCTGTGAGTTGAAGAGATGC+AGG | - | chr8.4:25119828-25119847 | MS.gene45607:CDS | 45.0% |
| ! | TGGCTGGGTTGAAAAAGGTT+CGG | + | chr8.4:25120508-25120527 | None:intergenic | 45.0% |
| AGGAAGGGTTTGCCTTTGTG+AGG | - | chr8.4:25119785-25119804 | MS.gene45607:CDS | 50.0% | |
| CCTGACCGTAAGGTAATGCA+CGG | - | chr8.4:25120373-25120392 | MS.gene45607:CDS | 50.0% | |
| CGTGCATTACCTTACGGTCA+GGG | + | chr8.4:25120375-25120394 | None:intergenic | 50.0% | |
| GAGTTGAAGAGATGCAGGGT+AGG | - | chr8.4:25119833-25119852 | MS.gene45607:CDS | 50.0% | |
| GCCACTCCAGATGATAGAAG+TGG | - | chr8.4:25120728-25120747 | MS.gene45607:intron | 50.0% | |
| GGAAGGGTTTGCCTTTGTGA+GGG | - | chr8.4:25119786-25119805 | MS.gene45607:CDS | 50.0% | |
| TTATGCAGACCCTGACCGTA+AGG | - | chr8.4:25120363-25120382 | MS.gene45607:intron | 50.0% | |
| AGGGTTTGCCTTTGTGAGGG+AGG | - | chr8.4:25119789-25119808 | MS.gene45607:CDS | 55.0% | |
| CCGTGCATTACCTTACGGTC+AGG | + | chr8.4:25120376-25120395 | None:intergenic | 55.0% | |
| GGGTGGAGTGTGTAGAGGAA+GGG | - | chr8.4:25119770-25119789 | MS.gene45607:CDS | 55.0% | |
| GTTTGCCTTTGTGAGGGAGG+TGG | - | chr8.4:25119792-25119811 | MS.gene45607:CDS | 55.0% | |
| TGGGTGGAGTGTGTAGAGGA+AGG | - | chr8.4:25119769-25119788 | MS.gene45607:CDS | 55.0% | |
| TTGTGAGGGAGGTGGCCAAA+AGG | - | chr8.4:25119800-25119819 | MS.gene45607:CDS | 55.0% | |
| TTTGGCCACCTCCCTCACAA+AGG | + | chr8.4:25119800-25119819 | None:intergenic | 55.0% | |
| ! | GCAAGGAAAGACGAAGGCAC+AGG | - | chr8.4:25120905-25120924 | MS.gene45607:intron | 55.0% |
| !! | ATGGTGGGTGGAGTGTGTAG+AGG | - | chr8.4:25119765-25119784 | MS.gene45607:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 25119765 | 25120985 | 25119765 | ID=MS.gene45607 |
| chr8.4 | mRNA | 25119765 | 25120985 | 25119765 | ID=MS.gene45607.t1;Parent=MS.gene45607 |
| chr8.4 | exon | 25120920 | 25120985 | 25120920 | ID=MS.gene45607.t1.exon1;Parent=MS.gene45607.t1 |
| chr8.4 | CDS | 25120920 | 25120985 | 25120920 | ID=cds.MS.gene45607.t1;Parent=MS.gene45607.t1 |
| chr8.4 | exon | 25120366 | 25120410 | 25120366 | ID=MS.gene45607.t1.exon2;Parent=MS.gene45607.t1 |
| chr8.4 | CDS | 25120366 | 25120410 | 25120366 | ID=cds.MS.gene45607.t1;Parent=MS.gene45607.t1 |
| chr8.4 | exon | 25120221 | 25120280 | 25120221 | ID=MS.gene45607.t1.exon3;Parent=MS.gene45607.t1 |
| chr8.4 | CDS | 25120221 | 25120280 | 25120221 | ID=cds.MS.gene45607.t1;Parent=MS.gene45607.t1 |
| chr8.4 | exon | 25119987 | 25120082 | 25119987 | ID=MS.gene45607.t1.exon4;Parent=MS.gene45607.t1 |
| chr8.4 | CDS | 25119987 | 25120082 | 25119987 | ID=cds.MS.gene45607.t1;Parent=MS.gene45607.t1 |
| chr8.4 | exon | 25119765 | 25119884 | 25119765 | ID=MS.gene45607.t1.exon5;Parent=MS.gene45607.t1 |
| chr8.4 | CDS | 25119765 | 25119884 | 25119765 | ID=cds.MS.gene45607.t1;Parent=MS.gene45607.t1 |
| Gene Sequence |
| Protein sequence |
