Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073390.t1 | XP_013463300.1 | 88.9 | 434 | 16 | 1 | 1 | 434 | 1 | 402 | 1.70E-218 | 768.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073390.t1 | Q94AH6 | 72.0 | 432 | 86 | 1 | 3 | 434 | 2 | 398 | 1.8e-179 | 630.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073390.t1 | A0A072V6S2 | 88.9 | 434 | 16 | 1 | 1 | 434 | 1 | 402 | 1.2e-218 | 768.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene073390 | 0.82532 | 5.00E-54 | -1.69E-46 |
| MS.gene049264 | MS.gene073390 | 0.809228 | 2.10E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene073390 | 0.814929 | 1.20E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene073390 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene049585 | MS.gene073390 | 0.81492 | 1.20E-51 | -1.69E-46 |
| MS.gene049801 | MS.gene073390 | 0.81657 | 5.17E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene073390 | 0.824369 | 8.38E-54 | -1.69E-46 |
| MS.gene050084 | MS.gene073390 | 0.856958 | 2.26E-62 | -1.69E-46 |
| MS.gene050085 | MS.gene073390 | 0.856011 | 4.29E-62 | -1.69E-46 |
| MS.gene050213 | MS.gene073390 | 0.813618 | 2.34E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene073390 | 0.835336 | 1.78E-56 | -1.69E-46 |
| MS.gene050361 | MS.gene073390 | 0.855348 | 6.70E-62 | -1.69E-46 |
| MS.gene050551 | MS.gene073390 | 0.813444 | 2.55E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene073390 | 0.83053 | 2.79E-55 | -1.69E-46 |
| MS.gene050646 | MS.gene073390 | 0.838106 | 3.50E-57 | -1.69E-46 |
| MS.gene050654 | MS.gene073390 | 0.866401 | 2.93E-65 | -1.69E-46 |
| MS.gene050941 | MS.gene073390 | 0.816627 | 5.02E-52 | -1.69E-46 |
| MS.gene051066 | MS.gene073390 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene073390 | 0.823039 | 1.72E-53 | -1.69E-46 |
| MS.gene051209 | MS.gene073390 | 0.862647 | 4.37E-64 | -1.69E-46 |
| MS.gene051343 | MS.gene073390 | 0.818651 | 1.75E-52 | -1.69E-46 |
| MS.gene051381 | MS.gene073390 | 0.81042 | 1.16E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene073390 | 0.84548 | 3.96E-59 | -1.69E-46 |
| MS.gene052242 | MS.gene073390 | -0.859202 | 4.87E-63 | -1.69E-46 |
| MS.gene052307 | MS.gene073390 | 0.833297 | 5.78E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene073390 | 0.875692 | 2.52E-68 | -1.69E-46 |
| MS.gene052674 | MS.gene073390 | 0.820969 | 5.18E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene073390 | 0.823143 | 1.62E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene073390 | 0.831674 | 1.46E-55 | -1.69E-46 |
| MS.gene052775 | MS.gene073390 | 0.826912 | 2.09E-54 | -1.69E-46 |
| MS.gene052776 | MS.gene073390 | 0.874044 | 9.18E-68 | -1.69E-46 |
| MS.gene052932 | MS.gene073390 | 0.818989 | 1.47E-52 | -1.69E-46 |
| MS.gene052994 | MS.gene073390 | 0.853545 | 2.23E-61 | -1.69E-46 |
| MS.gene053058 | MS.gene073390 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene073390 | 0.83276 | 7.86E-56 | -1.69E-46 |
| MS.gene05315 | MS.gene073390 | 0.819957 | 8.84E-53 | -1.69E-46 |
| MS.gene053486 | MS.gene073390 | 0.84604 | 2.79E-59 | -1.69E-46 |
| MS.gene053620 | MS.gene073390 | 0.804789 | 1.82E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene073390 | 0.831229 | 1.88E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene073390 | 0.850623 | 1.51E-60 | -1.69E-46 |
| MS.gene054576 | MS.gene073390 | 0.807817 | 4.20E-50 | -1.69E-46 |
| MS.gene054641 | MS.gene073390 | 0.805654 | 1.20E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene073390 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene073390 | 0.824726 | 6.90E-54 | -1.69E-46 |
| MS.gene055311 | MS.gene073390 | 0.822762 | 1.99E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene073390 | 0.827643 | 1.40E-54 | -1.69E-46 |
| MS.gene055314 | MS.gene073390 | 0.810345 | 1.21E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene073390 | 0.813772 | 2.16E-51 | -1.69E-46 |
| MS.gene055582 | MS.gene073390 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene073390 | 0.839281 | 1.74E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene073390 | 0.80483 | 1.79E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene073390 | 0.874083 | 8.91E-68 | -1.69E-46 |
| MS.gene056097 | MS.gene073390 | 0.83037 | 3.05E-55 | -1.69E-46 |
| MS.gene05615 | MS.gene073390 | 0.819249 | 1.28E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene073390 | 0.835999 | 1.21E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene073390 | 0.808554 | 2.93E-50 | -1.69E-46 |
| MS.gene056480 | MS.gene073390 | 0.832378 | 9.78E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene073390 | 0.839307 | 1.71E-57 | -1.69E-46 |
| MS.gene056519 | MS.gene073390 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene056622 | MS.gene073390 | 0.81444 | 1.54E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene073390 | 0.807326 | 5.34E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene073390 | 0.814597 | 1.42E-51 | -1.69E-46 |
| MS.gene056849 | MS.gene073390 | 0.801808 | 7.56E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene073390 | 0.830142 | 3.47E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene073390 | 0.810114 | 1.35E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene073390 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene073390 | 0.827836 | 1.26E-54 | -1.69E-46 |
| MS.gene057600 | MS.gene073390 | 0.820138 | 8.04E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene073390 | 0.820155 | 7.97E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene073390 | 0.812131 | 4.95E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene073390 | 0.826462 | 2.68E-54 | -1.69E-46 |
| MS.gene058081 | MS.gene073390 | 0.836844 | 7.38E-57 | -1.69E-46 |
| MS.gene058223 | MS.gene073390 | -0.809017 | 2.33E-50 | -1.69E-46 |
| MS.gene058278 | MS.gene073390 | 0.8006 | 1.34E-48 | -1.69E-46 |
| MS.gene058289 | MS.gene073390 | 0.859965 | 2.87E-63 | -1.69E-46 |
| MS.gene058292 | MS.gene073390 | 0.844928 | 5.58E-59 | -1.69E-46 |
| MS.gene058429 | MS.gene073390 | 0.83166 | 1.47E-55 | -1.69E-46 |
| MS.gene058638 | MS.gene073390 | 0.850184 | 2.00E-60 | -1.69E-46 |
| MS.gene058639 | MS.gene073390 | 0.852336 | 4.93E-61 | -1.69E-46 |
| MS.gene058647 | MS.gene073390 | 0.835842 | 1.33E-56 | -1.69E-46 |
| MS.gene058758 | MS.gene073390 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene058919 | MS.gene073390 | 0.833519 | 5.09E-56 | -1.69E-46 |
| MS.gene059007 | MS.gene073390 | 0.870975 | 9.72E-67 | -1.69E-46 |
| MS.gene059170 | MS.gene073390 | 0.803752 | 3.00E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene073390 | 0.84475 | 6.23E-59 | -1.69E-46 |
| MS.gene059725 | MS.gene073390 | 0.802253 | 6.12E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene073390 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene073390 | 0.802739 | 4.86E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene073390 | 0.82532 | 5.00E-54 | -1.69E-46 |
| MS.gene060380 | MS.gene073390 | 0.832194 | 1.09E-55 | -1.69E-46 |
| MS.gene060400 | MS.gene073390 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene060520 | MS.gene073390 | 0.810548 | 1.09E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene073390 | 0.813457 | 2.54E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene073390 | 0.82891 | 6.91E-55 | -1.69E-46 |
| MS.gene060785 | MS.gene073390 | 0.8022 | 6.28E-49 | -1.69E-46 |
| MS.gene060850 | MS.gene073390 | 0.821854 | 3.24E-53 | -1.69E-46 |
| MS.gene060851 | MS.gene073390 | 0.82265 | 2.11E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene073390 | 0.820385 | 7.05E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene073390 | 0.835347 | 1.77E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene073390 | 0.87283 | 2.35E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene073390 | 0.826517 | 2.60E-54 | -1.69E-46 |
| MS.gene061006 | MS.gene073390 | 0.818993 | 1.47E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene073390 | 0.803303 | 3.72E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene073390 | 0.817779 | 2.76E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073390.t1 | MTR_2g437390 | 88.940 | 434 | 16 | 1 | 1 | 434 | 1 | 402 | 0.0 | 795 |
| MS.gene073390.t1 | MTR_4g119413 | 82.488 | 434 | 44 | 1 | 1 | 434 | 3 | 404 | 0.0 | 743 |
| MS.gene073390.t1 | MTR_4g119413 | 82.488 | 434 | 44 | 1 | 1 | 434 | 3 | 404 | 0.0 | 738 |
| MS.gene073390.t1 | MTR_7g108340 | 67.130 | 432 | 104 | 1 | 3 | 434 | 2 | 395 | 0.0 | 605 |
| MS.gene073390.t1 | MTR_4g119490 | 55.500 | 200 | 89 | 0 | 7 | 206 | 5 | 204 | 4.05e-74 | 231 |
| MS.gene073390.t1 | MTR_4g119450 | 54.412 | 204 | 89 | 2 | 5 | 206 | 3 | 204 | 2.94e-70 | 221 |
| MS.gene073390.t1 | MTR_4g119422 | 52.252 | 222 | 98 | 3 | 6 | 222 | 2 | 220 | 8.92e-67 | 218 |
| MS.gene073390.t1 | MTR_4g119930 | 52.683 | 205 | 94 | 1 | 2 | 206 | 4 | 205 | 1.90e-64 | 206 |
| MS.gene073390.t1 | MTR_4g119930 | 57.692 | 156 | 63 | 1 | 2 | 157 | 4 | 156 | 5.54e-52 | 173 |
| MS.gene073390.t1 | MTR_4g119930 | 50.318 | 157 | 78 | 0 | 50 | 206 | 1 | 157 | 7.84e-44 | 151 |
| MS.gene073390.t1 | MTR_6g011700 | 25.761 | 427 | 252 | 8 | 10 | 434 | 23 | 386 | 5.18e-38 | 146 |
| MS.gene073390.t1 | MTR_8g056030 | 26.650 | 394 | 231 | 7 | 43 | 434 | 51 | 388 | 3.53e-37 | 144 |
| MS.gene073390.t1 | MTR_6g011770 | 25.116 | 430 | 257 | 9 | 10 | 437 | 23 | 389 | 3.95e-37 | 144 |
| MS.gene073390.t1 | MTR_5g039890 | 25.791 | 411 | 264 | 10 | 43 | 437 | 49 | 434 | 1.07e-36 | 140 |
| MS.gene073390.t1 | MTR_3g115680 | 37.173 | 191 | 106 | 4 | 2 | 187 | 4 | 185 | 3.46e-34 | 126 |
| MS.gene073390.t1 | MTR_5g039880 | 26.202 | 416 | 245 | 11 | 23 | 434 | 32 | 389 | 1.00e-29 | 122 |
| MS.gene073390.t1 | MTR_7g039680 | 27.675 | 271 | 169 | 5 | 43 | 311 | 49 | 294 | 5.54e-29 | 117 |
| MS.gene073390.t1 | MTR_7g039430 | 28.689 | 244 | 168 | 4 | 76 | 317 | 69 | 308 | 1.50e-28 | 115 |
| MS.gene073390.t1 | MTR_5g040190 | 28.279 | 244 | 169 | 4 | 76 | 317 | 69 | 308 | 1.65e-28 | 115 |
| MS.gene073390.t1 | MTR_7g039440 | 25.074 | 339 | 203 | 7 | 76 | 412 | 5 | 294 | 4.10e-28 | 113 |
| MS.gene073390.t1 | MTR_5g040180 | 24.355 | 349 | 213 | 6 | 76 | 422 | 69 | 368 | 6.79e-28 | 114 |
| MS.gene073390.t1 | MTR_1g040925 | 27.155 | 232 | 164 | 3 | 92 | 321 | 102 | 330 | 1.36e-26 | 113 |
| MS.gene073390.t1 | MTR_1g040925 | 23.420 | 269 | 158 | 4 | 144 | 412 | 373 | 593 | 1.23e-16 | 83.2 |
| MS.gene073390.t1 | MTR_1g040995 | 27.155 | 232 | 164 | 3 | 92 | 321 | 102 | 330 | 1.39e-26 | 113 |
| MS.gene073390.t1 | MTR_1g040995 | 23.420 | 269 | 158 | 4 | 144 | 412 | 373 | 593 | 1.17e-16 | 83.2 |
| MS.gene073390.t1 | MTR_7g039690 | 27.273 | 319 | 202 | 9 | 32 | 328 | 21 | 331 | 1.21e-23 | 104 |
| MS.gene073390.t1 | MTR_2g019260 | 26.032 | 315 | 209 | 10 | 34 | 341 | 110 | 407 | 2.14e-22 | 100 |
| MS.gene073390.t1 | MTR_2g019260 | 26.032 | 315 | 209 | 10 | 34 | 341 | 110 | 407 | 2.60e-22 | 100 |
| MS.gene073390.t1 | MTR_4g131910 | 55.422 | 83 | 36 | 1 | 1 | 83 | 1 | 82 | 8.24e-22 | 94.4 |
| MS.gene073390.t1 | MTR_5g039770 | 26.027 | 219 | 156 | 2 | 89 | 304 | 36 | 251 | 1.59e-18 | 88.6 |
| MS.gene073390.t1 | MTR_7g445240 | 25.649 | 308 | 204 | 9 | 9 | 307 | 30 | 321 | 2.23e-18 | 88.2 |
| MS.gene073390.t1 | MTR_7g039790 | 26.840 | 231 | 156 | 4 | 89 | 311 | 100 | 325 | 2.27e-18 | 88.2 |
| MS.gene073390.t1 | MTR_7g039660 | 21.614 | 347 | 204 | 8 | 92 | 434 | 95 | 377 | 1.99e-17 | 85.1 |
| MS.gene073390.t1 | MTR_4g131905 | 43.564 | 101 | 45 | 4 | 45 | 145 | 57 | 145 | 2.95e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073390.t1 | AT4G02570 | 72.917 | 432 | 82 | 3 | 3 | 434 | 2 | 398 | 0.0 | 650 |
| MS.gene073390.t1 | AT4G02570 | 72.917 | 432 | 82 | 3 | 3 | 434 | 2 | 398 | 0.0 | 650 |
| MS.gene073390.t1 | AT4G02570 | 72.917 | 432 | 82 | 3 | 3 | 434 | 2 | 398 | 0.0 | 650 |
| MS.gene073390.t1 | AT4G02570 | 72.917 | 432 | 82 | 3 | 3 | 434 | 2 | 398 | 0.0 | 650 |
| MS.gene073390.t1 | AT1G43140 | 57.639 | 432 | 144 | 1 | 4 | 435 | 12 | 404 | 0.0 | 524 |
| MS.gene073390.t1 | AT1G02980 | 54.839 | 434 | 161 | 4 | 1 | 433 | 1 | 400 | 8.83e-172 | 499 |
| MS.gene073390.t1 | AT1G02980 | 54.839 | 434 | 161 | 4 | 1 | 433 | 1 | 400 | 8.83e-172 | 499 |
| MS.gene073390.t1 | AT1G59790 | 53.125 | 416 | 142 | 3 | 1 | 414 | 6 | 370 | 1.09e-151 | 435 |
| MS.gene073390.t1 | AT1G59790 | 52.970 | 404 | 137 | 3 | 1 | 402 | 6 | 358 | 1.17e-146 | 422 |
| MS.gene073390.t1 | AT1G59800 | 54.098 | 244 | 108 | 1 | 7 | 250 | 7 | 246 | 3.39e-91 | 276 |
| MS.gene073390.t1 | AT1G69670 | 27.157 | 394 | 229 | 8 | 43 | 434 | 52 | 389 | 1.01e-38 | 149 |
| MS.gene073390.t1 | AT1G69670 | 27.157 | 394 | 229 | 8 | 43 | 434 | 52 | 389 | 1.01e-38 | 149 |
| MS.gene073390.t1 | AT1G26830 | 25.806 | 434 | 243 | 9 | 10 | 434 | 26 | 389 | 3.19e-38 | 147 |
| MS.gene073390.t1 | AT5G46210 | 27.036 | 307 | 198 | 11 | 37 | 335 | 113 | 401 | 6.95e-19 | 89.7 |
Find 93 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCGTTTCTTTCACTATT+TGG | 0.108715 | 2.4:+54405965 | MS.gene073390:CDS |
| CAGGTTTACAAGGAAGTAAA+TGG | 0.245353 | 2.4:+54406160 | MS.gene073390:intron |
| ATTCATTAAGGGAATATAAA+AGG | 0.292078 | 2.4:+54407872 | MS.gene073390:CDS |
| CACAACCTGCTTAAATATAC+TGG | 0.307077 | 2.4:-54407056 | None:intergenic |
| ATTTATCCTATAGGCTCTTA+AGG | 0.325880 | 2.4:+54408478 | MS.gene073390:intron |
| GCTGACTTGCTTTCGTGATT+TGG | 0.326859 | 2.4:+54406037 | MS.gene073390:CDS |
| TTAGATATATTTGTGGAGAT+TGG | 0.327866 | 2.4:+54406346 | MS.gene073390:CDS |
| AATCAGGACAAGAATCTTCT+AGG | 0.335743 | 2.4:-54406462 | None:intergenic |
| ACAGAAGCTGAAGAATATTC+TGG | 0.348230 | 2.4:+54403258 | MS.gene073390:CDS |
| TATTGCAACAAGGGTGTTGC+TGG | 0.363828 | 2.4:+54408515 | MS.gene073390:CDS |
| TGTGGAATAGAGTATGATTC+TGG | 0.367247 | 2.4:-54408396 | None:intergenic |
| ACCATAAAATCATGGTTAGA+TGG | 0.374090 | 2.4:+54405940 | MS.gene073390:CDS |
| GCTTGAAACGGGAGAAAGAT+AGG | 0.374850 | 2.4:+54406579 | MS.gene073390:CDS |
| CACCAACGTTGTACCTTCTT+CGG | 0.375640 | 2.4:-54407203 | None:intergenic |
| CTTCCTCCGCTTAATGAAGT+TGG | 0.395619 | 2.4:+54406014 | MS.gene073390:CDS |
| AACCCAACATATCCCTTTCT+CGG | 0.402780 | 2.4:-54408214 | None:intergenic |
| TTCTAAAATACCCAAAGGCT+TGG | 0.406125 | 2.4:+54407024 | MS.gene073390:CDS |
| TCAGAGCTGAACTGAGGTTC+AGG | 0.411217 | 2.4:-54403289 | None:intergenic |
| TTCCTCCGCTTAATGAAGTT+GGG | 0.422753 | 2.4:+54406015 | MS.gene073390:CDS |
| AGCGGTTGGGAATAGTCATT+TGG | 0.424285 | 2.4:-54403455 | None:intergenic |
| GGAGATTGGAATGGGGCATA+TGG | 0.426092 | 2.4:+54406360 | MS.gene073390:CDS |
| TAGCGAGCCCAAGTTATTAG+AGG | 0.429320 | 2.4:+54406625 | MS.gene073390:CDS |
| TGCTTAAATATACTGGAAAC+AGG | 0.431414 | 2.4:-54407049 | None:intergenic |
| GGAAACAGGATCCAAGCCTT+TGG | 0.432362 | 2.4:-54407035 | None:intergenic |
| AAAATGTCTGCAGCCGAGAA+AGG | 0.435951 | 2.4:+54408201 | MS.gene073390:intron |
| ATTCTCGAAAGGCTTCAAAC+TGG | 0.437747 | 2.4:+54406437 | MS.gene073390:CDS |
| GAAACAGGATCCAAGCCTTT+GGG | 0.444806 | 2.4:-54407034 | None:intergenic |
| ATATTTGTGGAGATTGGAAT+GGG | 0.445460 | 2.4:+54406352 | MS.gene073390:CDS |
| AGAATATACCTCTAATAACT+TGG | 0.467807 | 2.4:-54406633 | None:intergenic |
| GGCGGAGGAGTGCTTGAAAC+GGG | 0.472033 | 2.4:+54406568 | MS.gene073390:intron |
| GACTCGTTGTGCTCATCAAA+AGG | 0.475947 | 2.4:+54407913 | MS.gene073390:CDS |
| ACAAAATGTGGCAAGCAGTT+CGG | 0.477078 | 2.4:-54408549 | None:intergenic |
| TGTTTCCAGTATATTTAAGC+AGG | 0.481609 | 2.4:+54407051 | MS.gene073390:CDS |
| TGGATCGATACTTTATTGCT+CGG | 0.482660 | 2.4:+54405985 | MS.gene073390:CDS |
| AAATGTATTAGATATATTTG+TGG | 0.483791 | 2.4:+54406339 | MS.gene073390:CDS |
| CAGCCGAGAAAGGGATATGT+TGG | 0.485683 | 2.4:+54408211 | MS.gene073390:intron |
| AATACCTTGAGCATATAATC+AGG | 0.490182 | 2.4:-54406478 | None:intergenic |
| AACCGCTGTATGATAAGTAC+AGG | 0.495768 | 2.4:+54403471 | MS.gene073390:CDS |
| ATTGTATAAGACGAGATCTC+AGG | 0.498447 | 2.4:-54407939 | None:intergenic |
| AAATGTCTGCAGCCGAGAAA+GGG | 0.501110 | 2.4:+54408202 | MS.gene073390:intron |
| AGGTTTACAAGGAAGTAAAT+GGG | 0.502271 | 2.4:+54406161 | MS.gene073390:intron |
| ATGCAGCATGTTACCGAAGA+AGG | 0.506218 | 2.4:+54407190 | MS.gene073390:intron |
| TATATTTGTGGAGATTGGAA+TGG | 0.508425 | 2.4:+54406351 | MS.gene073390:CDS |
| CTATTGATTTAGAGCAAGGA+TGG | 0.515189 | 2.4:+54403215 | MS.gene073390:CDS |
| AGGTACAACGTTGGTGAAGT+TGG | 0.516536 | 2.4:+54407210 | MS.gene073390:CDS |
| TAAGTACAGGGAGGCATTTG+AGG | 0.519320 | 2.4:+54403484 | MS.gene073390:CDS |
| TTCTGCATATTATTCTCGAA+AGG | 0.520286 | 2.4:+54406426 | MS.gene073390:CDS |
| TGCGAGAACTTGTGAGGAGG+TGG | 0.525524 | 2.4:+54405913 | MS.gene073390:CDS |
| GGTTGGGAATAGTCATTTGG+AGG | 0.527736 | 2.4:-54403452 | None:intergenic |
| GTACTTATCATACAGCGGTT+GGG | 0.527755 | 2.4:-54403468 | None:intergenic |
| TGTACTTATCATACAGCGGT+TGG | 0.527818 | 2.4:-54403469 | None:intergenic |
| TTATCAATTCCAGGTTTACA+AGG | 0.528929 | 2.4:+54406150 | MS.gene073390:intron |
| ATATGTTGGGTTACAAGAGC+AGG | 0.529679 | 2.4:+54408225 | MS.gene073390:CDS |
| AAGACTATTGATTTAGAGCA+AGG | 0.536063 | 2.4:+54403211 | MS.gene073390:CDS |
| TCGTGCTTCTCTCTCAAAGA+AGG | 0.537882 | 2.4:-54405879 | None:intergenic |
| GAGAATATTATCACAAAATG+TGG | 0.541209 | 2.4:-54408561 | None:intergenic |
| TTGTCCTGATTATATGCTCA+AGG | 0.542877 | 2.4:+54406474 | MS.gene073390:CDS |
| GTGATAATATTCTCAAGAAG+AGG | 0.543649 | 2.4:+54408570 | MS.gene073390:CDS |
| AGCCGAGAAAGGGATATGTT+GGG | 0.543929 | 2.4:+54408212 | MS.gene073390:intron |
| AGGCGGAGGAGTGCTTGAAA+CGG | 0.547934 | 2.4:+54406567 | MS.gene073390:intron |
| TTTGAGATATATTGCAACAA+GGG | 0.555192 | 2.4:+54408506 | MS.gene073390:CDS |
| GAATATACCTCTAATAACTT+GGG | 0.556355 | 2.4:-54406632 | None:intergenic |
| GTGGGCTAACCATAAAATCA+TGG | 0.561200 | 2.4:+54405932 | MS.gene073390:CDS |
| AACAGTCGTTCACATATGCC+AGG | 0.571635 | 2.4:-54408372 | None:intergenic |
| CTTAGGTTGAAGACTTGTCA+AGG | 0.575826 | 2.4:+54406987 | MS.gene073390:intron |
| TGCAGAAGTGTCTTTGAGCA+TGG | 0.576831 | 2.4:-54406410 | None:intergenic |
| TGGGCTCGCTACTAGAGTGC+AGG | 0.577235 | 2.4:-54406613 | None:intergenic |
| TATTGATTTAGAGCAAGGAT+GGG | 0.578636 | 2.4:+54403216 | MS.gene073390:CDS |
| AAGCTGAAGAATATTCTGGA+AGG | 0.583829 | 2.4:+54403262 | MS.gene073390:CDS |
| CTTGAAACGGGAGAAAGATA+GGG | 0.592854 | 2.4:+54406580 | MS.gene073390:CDS |
| AGAACATACAAGAGAAATCA+CGG | 0.593996 | 2.4:-54406197 | None:intergenic |
| AGGGATTATCGATGAGTGAA+CGG | 0.601104 | 2.4:+54403188 | None:intergenic |
| AGCTGAAGAATATTCTGGAA+GGG | 0.602844 | 2.4:+54403263 | MS.gene073390:CDS |
| GTCAGCCCAACTTCATTAAG+CGG | 0.606052 | 2.4:-54406020 | None:intergenic |
| AAGATTGATCAAGAACGTGA+AGG | 0.609119 | 2.4:+54406289 | MS.gene073390:intron |
| AGATGCAGCAAGTAACAAGA+AGG | 0.609700 | 2.4:+54407237 | MS.gene073390:CDS |
| AGAGCTGCATGACAAGTACC+TGG | 0.622098 | 2.4:+54408354 | MS.gene073390:CDS |
| TTATGTTGCGAGAACTTGTG+AGG | 0.624498 | 2.4:+54405907 | MS.gene073390:CDS |
| TGCATTACTTAGAGATGACA+AGG | 0.635739 | 2.4:+54406886 | MS.gene073390:CDS |
| ATCGATACTTTATTGCTCGG+AGG | 0.640352 | 2.4:+54405988 | MS.gene073390:CDS |
| ATAATATTCTCAAGAAGAGG+CGG | 0.643763 | 2.4:+54408573 | MS.gene073390:CDS |
| TATCCTATAGGCTCTTAAGG+AGG | 0.649623 | 2.4:+54408481 | MS.gene073390:intron |
| AGCCCAACTTCATTAAGCGG+AGG | 0.655556 | 2.4:-54406017 | None:intergenic |
| TATTTGTGGAGATTGGAATG+GGG | 0.661334 | 2.4:+54406353 | MS.gene073390:CDS |
| GCGAGAACTTGTGAGGAGGT+GGG | 0.667854 | 2.4:+54405914 | MS.gene073390:CDS |
| TCCCTGTACTTATCATACAG+CGG | 0.679899 | 2.4:-54403473 | None:intergenic |
| TGAACCTCAGTTCAGCTCTG+AGG | 0.696799 | 2.4:+54403291 | MS.gene073390:CDS |
| TGTTGCGAGAACTTGTGAGG+AGG | 0.698023 | 2.4:+54405910 | MS.gene073390:CDS |
| ACCGCTGTATGATAAGTACA+GGG | 0.699917 | 2.4:+54403472 | MS.gene073390:CDS |
| TAGTCCTCAGAGCTGAACTG+AGG | 0.704381 | 2.4:-54403295 | None:intergenic |
| GAATCATACTCTATTCCACA+AGG | 0.714768 | 2.4:+54408399 | MS.gene073390:CDS |
| TACCGAAGAAGGTACAACGT+TGG | 0.733065 | 2.4:+54407201 | MS.gene073390:CDS |
| GCTGTATGATAAGTACAGGG+AGG | 0.780823 | 2.4:+54403475 | MS.gene073390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAAAAAAAAAAAATAC+CGG | + | chr2.4:54404566-54404585 | MS.gene073390:intron | 10.0% |
| !!! | GTTTTAGTTTTATATTAATT+GGG | + | chr2.4:54403350-54403369 | MS.gene073390:intron | 10.0% |
| !!! | TGTTTTAGTTTTATATTAAT+TGG | + | chr2.4:54403349-54403368 | MS.gene073390:intron | 10.0% |
| !! | AAATGTATTAGATATATTTG+TGG | + | chr2.4:54406339-54406358 | MS.gene073390:CDS | 15.0% |
| !! | AGAAGGAAAATTATAAATAT+AGG | - | chr2.4:54407089-54407108 | None:intergenic | 15.0% |
| !! | TTGTAAAAAAAAAAAATACC+GGG | + | chr2.4:54404567-54404586 | MS.gene073390:intron | 15.0% |
| !!! | AAGACTTCTATATAATTTTA+AGG | + | chr2.4:54407849-54407868 | MS.gene073390:intron | 15.0% |
| !!! | ATAATTTTAAGGATTCATTA+AGG | + | chr2.4:54407860-54407879 | MS.gene073390:intron | 15.0% |
| !!! | ATGAAATGATTTATTTTTCT+TGG | + | chr2.4:54405666-54405685 | MS.gene073390:intron | 15.0% |
| !!! | ATGTCTATTTTTTACATTAT+AGG | + | chr2.4:54403787-54403806 | MS.gene073390:intron | 15.0% |
| !!! | GAAATTATAATTTTCAACTT+AGG | + | chr2.4:54407479-54407498 | MS.gene073390:intron | 15.0% |
| !!! | TAATTTTAAGGATTCATTAA+GGG | + | chr2.4:54407861-54407880 | MS.gene073390:intron | 15.0% |
| !!! | TGAAATGATTTATTTTTCTT+GGG | + | chr2.4:54405667-54405686 | MS.gene073390:intron | 15.0% |
| !!! | TGTCTATTTTTTACATTATA+GGG | + | chr2.4:54403788-54403807 | MS.gene073390:intron | 15.0% |
| !!! | TTTTTTTTTTTATCAATTCC+AGG | + | chr2.4:54406141-54406160 | MS.gene073390:intron | 15.0% |
| !! | AAACAGAAGCTAAATAATAT+TGG | - | chr2.4:54406527-54406546 | None:intergenic | 20.0% |
| !! | AATTGATATTGATCCATTTA+TGG | + | chr2.4:54408284-54408303 | MS.gene073390:intron | 20.0% |
| !! | ACATTTCACAAAGAAAAAAA+AGG | - | chr2.4:54406788-54406807 | None:intergenic | 20.0% |
| !! | ATGTATTCTTATTGTGTAAA+TGG | + | chr2.4:54404930-54404949 | MS.gene073390:intron | 20.0% |
| !! | ATTAACAGATACATAATCAA+AGG | - | chr2.4:54405798-54405817 | None:intergenic | 20.0% |
| !! | ATTCATTAAGGGAATATAAA+AGG | + | chr2.4:54407872-54407891 | MS.gene073390:CDS | 20.0% |
| !! | TACATAATCAAAGGAAAAAA+CGG | - | chr2.4:54405789-54405808 | None:intergenic | 20.0% |
| !! | TCTATATATGTTGTCAAAAT+CGG | + | chr2.4:54407106-54407125 | MS.gene073390:intron | 20.0% |
| !! | TGCAGTTAAAACTATAAAAT+TGG | - | chr2.4:54408265-54408284 | None:intergenic | 20.0% |
| !! | TTAGTTAACTTACTAATAGT+TGG | + | chr2.4:54405401-54405420 | MS.gene073390:intron | 20.0% |
| !!! | AAAGAAAATTTTTGTCGATA+AGG | - | chr2.4:54408072-54408091 | None:intergenic | 20.0% |
| !!! | AAATGATTTATTTTTCTTGG+GGG | + | chr2.4:54405669-54405688 | MS.gene073390:intron | 20.0% |
| !!! | AAGATTATTACTATTTTGCT+TGG | - | chr2.4:54407777-54407796 | None:intergenic | 20.0% |
| !!! | AATTTAAAATACAATCAGAC+AGG | - | chr2.4:54403569-54403588 | None:intergenic | 20.0% |
| !!! | ATAACTGAAATTCACTTTTT+GGG | + | chr2.4:54405844-54405863 | MS.gene073390:intron | 20.0% |
| !!! | ATTATTTCTTAATCTGGATT+GGG | + | chr2.4:54404632-54404651 | MS.gene073390:intron | 20.0% |
| !!! | ATTTTGACAACATATATAGA+AGG | - | chr2.4:54407106-54407125 | None:intergenic | 20.0% |
| !!! | GAAATGATTTATTTTTCTTG+GGG | + | chr2.4:54405668-54405687 | MS.gene073390:intron | 20.0% |
| !!! | TGATTGATAATTTTCAACTT+AGG | + | chr2.4:54407413-54407432 | MS.gene073390:intron | 20.0% |
| !!! | TGTATATTATTTTCTGTTAC+TGG | + | chr2.4:54407436-54407455 | MS.gene073390:intron | 20.0% |
| !!! | TTATGATTTAAGACAGAATT+GGG | - | chr2.4:54405324-54405343 | None:intergenic | 20.0% |
| ! | AAATGACACTAAATATGACA+AGG | - | chr2.4:54407561-54407580 | None:intergenic | 25.0% |
| ! | ACCTATTATAAACATAACTG+TGG | - | chr2.4:54408039-54408058 | None:intergenic | 25.0% |
| ! | AGAATATACCTCTAATAACT+TGG | - | chr2.4:54406636-54406655 | None:intergenic | 25.0% |
| ! | AGGTTATATAAATAAAACCC+AGG | + | chr2.4:54404709-54404728 | MS.gene073390:intron | 25.0% |
| ! | ATCTGAAAGATTTATCCTAT+AGG | + | chr2.4:54408469-54408488 | MS.gene073390:intron | 25.0% |
| ! | ATCTTTAAACAAAAGAGGAT+AGG | - | chr2.4:54406274-54406293 | None:intergenic | 25.0% |
| ! | ATGTAAAGCACAAAATCAAA+CGG | - | chr2.4:54408136-54408155 | None:intergenic | 25.0% |
| ! | ATTGTAACACAAATTTGAAC+AGG | - | chr2.4:54407367-54407386 | None:intergenic | 25.0% |
| ! | CCTATTATAAACATAACTGT+GGG | - | chr2.4:54408038-54408057 | None:intergenic | 25.0% |
| ! | CTATATATGTTGTCAAAATC+GGG | + | chr2.4:54407107-54407126 | MS.gene073390:intron | 25.0% |
| ! | CTATTATAAACATAACTGTG+GGG | - | chr2.4:54408037-54408056 | None:intergenic | 25.0% |
| ! | CTGCTTCAATTTAGAAAAAT+AGG | - | chr2.4:54404681-54404700 | None:intergenic | 25.0% |
| ! | GAATATACCTCTAATAACTT+GGG | - | chr2.4:54406635-54406654 | None:intergenic | 25.0% |
| ! | GAGAATATTATCACAAAATG+TGG | - | chr2.4:54408564-54408583 | None:intergenic | 25.0% |
| ! | GATCAATCTTTAAACAAAAG+AGG | - | chr2.4:54406279-54406298 | None:intergenic | 25.0% |
| ! | TATATATGTTGTCAAAATCG+GGG | + | chr2.4:54407108-54407127 | MS.gene073390:intron | 25.0% |
| ! | TATTATAAACATAACTGTGG+GGG | - | chr2.4:54408036-54408055 | None:intergenic | 25.0% |
| ! | TGTTTACGCATAAATTCAAA+AGG | + | chr2.4:54407723-54407742 | MS.gene073390:intron | 25.0% |
| ! | TTAGATATATTTGTGGAGAT+TGG | + | chr2.4:54406346-54406365 | MS.gene073390:CDS | 25.0% |
| ! | TTAGCTTCTGTTTAATATTG+TGG | + | chr2.4:54406534-54406553 | MS.gene073390:intron | 25.0% |
| !! | CTTATGATTTAAGACAGAAT+TGG | - | chr2.4:54405325-54405344 | None:intergenic | 25.0% |
| !! | CTTTTAGGCAGTAATAAAAA+AGG | - | chr2.4:54405584-54405603 | None:intergenic | 25.0% |
| !! | GATTATTTCTTAATCTGGAT+TGG | + | chr2.4:54404631-54404650 | MS.gene073390:intron | 25.0% |
| !! | GCTTGGTAATAACATTTATA+AGG | - | chr2.4:54407760-54407779 | None:intergenic | 25.0% |
| !! | TCCTCAACAAAATAATGTTT+TGG | + | chr2.4:54403989-54404008 | MS.gene073390:intron | 25.0% |
| !! | TTTGAGATATATTGCAACAA+GGG | + | chr2.4:54408506-54408525 | MS.gene073390:CDS | 25.0% |
| !! | TTTTTACATTATAGGGCTAT+TGG | + | chr2.4:54403795-54403814 | MS.gene073390:intron | 25.0% |
| !!! | AATGATTTATTTTTCTTGGG+GGG | + | chr2.4:54405670-54405689 | MS.gene073390:intron | 25.0% |
| !!! | AATGTTCTTTTTCAAGAAGT+TGG | - | chr2.4:54406856-54406875 | None:intergenic | 25.0% |
| !!! | CATAACTGAAATTCACTTTT+TGG | + | chr2.4:54405843-54405862 | MS.gene073390:intron | 25.0% |
| !!! | GTACACTTTTTCGTATTAAT+AGG | + | chr2.4:54405117-54405136 | MS.gene073390:intron | 25.0% |
| !!! | TCCAAAACATTATTTTGTTG+AGG | - | chr2.4:54403993-54404012 | None:intergenic | 25.0% |
| !!! | TGGGTTTTATTTATATAACC+TGG | - | chr2.4:54404710-54404729 | None:intergenic | 25.0% |
| !!! | TTGATTTTTGAGTAAGTAGT+TGG | + | chr2.4:54404049-54404068 | MS.gene073390:intron | 25.0% |
| !!! | TTTTGAGATATATTGCAACA+AGG | + | chr2.4:54408505-54408524 | MS.gene073390:CDS | 25.0% |
| AAAACTAGTACCGCAATAAT+CGG | + | chr2.4:54407329-54407348 | MS.gene073390:intron | 30.0% | |
| AAGTAACTGAACTAAAACAG+AGG | - | chr2.4:54404904-54404923 | None:intergenic | 30.0% | |
| AATACCTTGAGCATATAATC+AGG | - | chr2.4:54406481-54406500 | None:intergenic | 30.0% | |
| AATATTGTGGCATTCATTAC+AGG | + | chr2.4:54406547-54406566 | MS.gene073390:intron | 30.0% | |
| ACCATAAAATCATGGTTAGA+TGG | + | chr2.4:54405940-54405959 | MS.gene073390:CDS | 30.0% | |
| AGAACATACAAGAGAAATCA+CGG | - | chr2.4:54406200-54406219 | None:intergenic | 30.0% | |
| AGGTTTACAAGGAAGTAAAT+GGG | + | chr2.4:54406161-54406180 | MS.gene073390:intron | 30.0% | |
| ATAATATTCTCAAGAAGAGG+CGG | + | chr2.4:54408573-54408592 | MS.gene073390:CDS | 30.0% | |
| ATATTTGTGGAGATTGGAAT+GGG | + | chr2.4:54406352-54406371 | MS.gene073390:CDS | 30.0% | |
| ATTATAAACATAACTGTGGG+GGG | - | chr2.4:54408035-54408054 | None:intergenic | 30.0% | |
| ATTATACGATCATAACCTTG+TGG | - | chr2.4:54408417-54408436 | None:intergenic | 30.0% | |
| ATTTATCCTATAGGCTCTTA+AGG | + | chr2.4:54408478-54408497 | MS.gene073390:intron | 30.0% | |
| CCCACAGTTATGTTTATAAT+AGG | + | chr2.4:54408035-54408054 | MS.gene073390:intron | 30.0% | |
| CTACTAATAGAAAACTCTGA+AGG | - | chr2.4:54406078-54406097 | None:intergenic | 30.0% | |
| CTTCTTGAAAAAGAACATTC+TGG | + | chr2.4:54406857-54406876 | MS.gene073390:CDS | 30.0% | |
| GATTCCAAAATTTAGAGATC+TGG | - | chr2.4:54405222-54405241 | None:intergenic | 30.0% | |
| GGTACTATTTAAGCGTAATA+TGG | + | chr2.4:54406907-54406926 | MS.gene073390:intron | 30.0% | |
| GTGATAATATTCTCAAGAAG+AGG | + | chr2.4:54408570-54408589 | MS.gene073390:CDS | 30.0% | |
| TAACTAAAGCTAGTTAGAGA+GGG | - | chr2.4:54405388-54405407 | None:intergenic | 30.0% | |
| TATATTTGTGGAGATTGGAA+TGG | + | chr2.4:54406351-54406370 | MS.gene073390:CDS | 30.0% | |
| TCATGTTCTTCATGAACTTA+TGG | + | chr2.4:54404979-54404998 | MS.gene073390:intron | 30.0% | |
| TCTTAACACTCTGTGTAAAT+TGG | + | chr2.4:54407646-54407665 | MS.gene073390:intron | 30.0% | |
| TCTTCAACCTAAGCATTTAA+AGG | - | chr2.4:54406980-54406999 | None:intergenic | 30.0% | |
| TGCTTAAATATACTGGAAAC+AGG | - | chr2.4:54407052-54407071 | None:intergenic | 30.0% | |
| TGTGTCTCTTAAAATTTGAC+TGG | + | chr2.4:54405537-54405556 | MS.gene073390:intron | 30.0% | |
| TGTTTCCAGTATATTTAAGC+AGG | + | chr2.4:54407051-54407070 | MS.gene073390:CDS | 30.0% | |
| TTAACTAAAGCTAGTTAGAG+AGG | - | chr2.4:54405389-54405408 | None:intergenic | 30.0% | |
| TTATAGCGTCATTAGTTGAT+TGG | + | chr2.4:54405486-54405505 | MS.gene073390:intron | 30.0% | |
| TTATCAATTCCAGGTTTACA+AGG | + | chr2.4:54406150-54406169 | MS.gene073390:intron | 30.0% | |
| TTCTCGTTTCTTTCACTATT+TGG | + | chr2.4:54405965-54405984 | MS.gene073390:CDS | 30.0% | |
| TTCTGCATATTATTCTCGAA+AGG | + | chr2.4:54406426-54406445 | MS.gene073390:CDS | 30.0% | |
| ! | AATAGTGGTTTGTCCAAATT+CGG | + | chr2.4:54404508-54404527 | MS.gene073390:intron | 30.0% |
| ! | CTTTTCTATTGCAATAATCG+AGG | + | chr2.4:54407306-54407325 | MS.gene073390:intron | 30.0% |
| ! | TGACGCATTTTCTTCTTTTT+AGG | + | chr2.4:54403896-54403915 | MS.gene073390:intron | 30.0% |
| ! | TGATCCAGATCTCTAAATTT+TGG | + | chr2.4:54405215-54405234 | MS.gene073390:intron | 30.0% |
| ! | TGTTTGCAACTTTTCTACTA+GGG | + | chr2.4:54403713-54403732 | MS.gene073390:intron | 30.0% |
| ! | TTGCTATTATTCCAGCTATT+TGG | + | chr2.4:54406655-54406674 | MS.gene073390:intron | 30.0% |
| ! | TTGTTTGCAACTTTTCTACT+AGG | + | chr2.4:54403712-54403731 | MS.gene073390:intron | 30.0% |
| ! | TTTACACAGAGTGTTAAGAT+AGG | - | chr2.4:54407645-54407664 | None:intergenic | 30.0% |
| ! | TTTGTAGTTGTCCTTATTTC+TGG | + | chr2.4:54407271-54407290 | MS.gene073390:intron | 30.0% |
| ! | TTTTCTAAATTGAAGCAGCT+TGG | + | chr2.4:54404683-54404702 | MS.gene073390:intron | 30.0% |
| !! | AAAGTAGTTGGTAGCAAAAA+GGG | - | chr2.4:54404269-54404288 | None:intergenic | 30.0% |
| !! | AAGACTATTGATTTAGAGCA+AGG | + | chr2.4:54403211-54403230 | MS.gene073390:CDS | 30.0% |
| !! | TATTGATTTAGAGCAAGGAT+GGG | + | chr2.4:54403216-54403235 | MS.gene073390:CDS | 30.0% |
| !!! | CCCAGGTTTTAAAATGAAAA+CGG | + | chr2.4:54404726-54404745 | MS.gene073390:intron | 30.0% |
| !!! | CCGTTTTCATTTTAAAACCT+GGG | - | chr2.4:54404729-54404748 | None:intergenic | 30.0% |
| !!! | CTCTTTTCTAAAATACCCAA+AGG | + | chr2.4:54407019-54407038 | MS.gene073390:CDS | 30.0% |
| !!! | GGTTTTAAAATGAAAACGGA+AGG | + | chr2.4:54404730-54404749 | MS.gene073390:intron | 30.0% |
| !!! | TCCGTTTTCATTTTAAAACC+TGG | - | chr2.4:54404730-54404749 | None:intergenic | 30.0% |
| AAACAGAGAAACTAAGGGAA+AGG | - | chr2.4:54404847-54404866 | None:intergenic | 35.0% | |
| AAATGTCTGACCATGTTATG+TGG | - | chr2.4:54404104-54404123 | None:intergenic | 35.0% | |
| AAATTATTGGGATCGTGAGT+TGG | + | chr2.4:54404599-54404618 | MS.gene073390:intron | 35.0% | |
| AACAGAGAAACTAAGGGAAA+GGG | - | chr2.4:54404846-54404865 | None:intergenic | 35.0% | |
| AAGATTGATCAAGAACGTGA+AGG | + | chr2.4:54406289-54406308 | MS.gene073390:intron | 35.0% | |
| AAGCTGAAGAATATTCTGGA+AGG | + | chr2.4:54403262-54403281 | MS.gene073390:CDS | 35.0% | |
| AATCAGGACAAGAATCTTCT+AGG | - | chr2.4:54406465-54406484 | None:intergenic | 35.0% | |
| ACAAAATCAAACGGAAGAGT+GGG | - | chr2.4:54408127-54408146 | None:intergenic | 35.0% | |
| ACACAACTAACCACATAACA+TGG | + | chr2.4:54404091-54404110 | MS.gene073390:intron | 35.0% | |
| ACAGAAGCTGAAGAATATTC+TGG | + | chr2.4:54403258-54403277 | MS.gene073390:CDS | 35.0% | |
| ACAGCTTCCTTTAAATGCTT+AGG | + | chr2.4:54406970-54406989 | MS.gene073390:intron | 35.0% | |
| ACCATACACCATGTAACATT+TGG | + | chr2.4:54404196-54404215 | MS.gene073390:intron | 35.0% | |
| ACCTCACCAGATATTGTTAA+TGG | - | chr2.4:54404546-54404565 | None:intergenic | 35.0% | |
| ATAAACTACTAGTCCATCGT+TGG | - | chr2.4:54408006-54408025 | None:intergenic | 35.0% | |
| ATAGTAACTACGAATCTCTG+TGG | + | chr2.4:54405272-54405291 | MS.gene073390:intron | 35.0% | |
| ATATCATGTCATAGGTCACA+AGG | - | chr2.4:54403873-54403892 | None:intergenic | 35.0% | |
| ATTGTATAAGACGAGATCTC+AGG | - | chr2.4:54407942-54407961 | None:intergenic | 35.0% | |
| ATTTCTCCTTTCATTCCTGA+TGG | + | chr2.4:54407139-54407158 | MS.gene073390:intron | 35.0% | |
| CACAACCTGCTTAAATATAC+TGG | - | chr2.4:54407059-54407078 | None:intergenic | 35.0% | |
| CAGGTTTACAAGGAAGTAAA+TGG | + | chr2.4:54406160-54406179 | MS.gene073390:intron | 35.0% | |
| CATACACCATGTAACATTTG+GGG | + | chr2.4:54404198-54404217 | MS.gene073390:intron | 35.0% | |
| CATTTACTTCCTTGTAAACC+TGG | - | chr2.4:54406162-54406181 | None:intergenic | 35.0% | |
| CCAATCTCAGTTTCCATAAA+TGG | - | chr2.4:54408300-54408319 | None:intergenic | 35.0% | |
| CCATACACCATGTAACATTT+GGG | + | chr2.4:54404197-54404216 | MS.gene073390:intron | 35.0% | |
| CCATTTATGGAAACTGAGAT+TGG | + | chr2.4:54408297-54408316 | MS.gene073390:intron | 35.0% | |
| CGTCATTGATATCATGTCAT+AGG | - | chr2.4:54403881-54403900 | None:intergenic | 35.0% | |
| CTATAATTATCTAGTCCACG+TGG | - | chr2.4:54404027-54404046 | None:intergenic | 35.0% | |
| GAATCATACTCTATTCCACA+AGG | + | chr2.4:54408399-54408418 | MS.gene073390:CDS | 35.0% | |
| GAGGACTACTTATAAGAACT+AGG | - | chr2.4:54403974-54403993 | None:intergenic | 35.0% | |
| GCAAGAAACAGAGAAACTAA+GGG | - | chr2.4:54404852-54404871 | None:intergenic | 35.0% | |
| GGATGAAGTAACTAAAACAG+AGG | - | chr2.4:54404883-54404902 | None:intergenic | 35.0% | |
| GGGTAAATGTTTGCAAAATG+AGG | - | chr2.4:54408107-54408126 | None:intergenic | 35.0% | |
| GTAAATAAGTCAAACTCGTG+TGG | - | chr2.4:54407623-54407642 | None:intergenic | 35.0% | |
| GTAACACAAATTTGAACAGG+CGG | - | chr2.4:54407364-54407383 | None:intergenic | 35.0% | |
| TAACACAAATTTGAACAGGC+GGG | - | chr2.4:54407363-54407382 | None:intergenic | 35.0% | |
| TAGCTGCCATTAACAATATC+TGG | + | chr2.4:54404537-54404556 | MS.gene073390:intron | 35.0% | |
| TAGTAACTACGAATCTCTGT+GGG | + | chr2.4:54405273-54405292 | MS.gene073390:intron | 35.0% | |
| TATACAATCCCAGAAGTTAC+TGG | + | chr2.4:54407954-54407973 | MS.gene073390:intron | 35.0% | |
| TATTTGTGGAGATTGGAATG+GGG | + | chr2.4:54406353-54406372 | MS.gene073390:CDS | 35.0% | |
| TCATGAAGAACATGAAACAG+AGG | - | chr2.4:54404974-54404993 | None:intergenic | 35.0% | |
| TCATGTGGCTCATTTAATTG+AGG | + | chr2.4:54405710-54405729 | MS.gene073390:intron | 35.0% | |
| TGCAAGAAACAGAGAAACTA+AGG | - | chr2.4:54404853-54404872 | None:intergenic | 35.0% | |
| TGCATTACTTAGAGATGACA+AGG | + | chr2.4:54406886-54406905 | MS.gene073390:CDS | 35.0% | |
| TGGATCGATACTTTATTGCT+CGG | + | chr2.4:54405985-54406004 | MS.gene073390:CDS | 35.0% | |
| TGGTTGTTTGTTCTTGTCTA+TGG | - | chr2.4:54404180-54404199 | None:intergenic | 35.0% | |
| TGTAGTCATTTGATCCGTAA+TGG | + | chr2.4:54403603-54403622 | MS.gene073390:intron | 35.0% | |
| TGTGGAATAGAGTATGATTC+TGG | - | chr2.4:54408399-54408418 | None:intergenic | 35.0% | |
| TTATAAACATAACTGTGGGG+GGG | - | chr2.4:54408034-54408053 | None:intergenic | 35.0% | |
| TTGATCAAAGGACACCATTA+CGG | - | chr2.4:54403620-54403639 | None:intergenic | 35.0% | |
| TTGTCCTGATTATATGCTCA+AGG | + | chr2.4:54406474-54406493 | MS.gene073390:CDS | 35.0% | |
| ! | AGCTGAAGAATATTCTGGAA+GGG | + | chr2.4:54403263-54403282 | MS.gene073390:CDS | 35.0% |
| ! | ATGTTATGTGGTTAGTTGTG+TGG | - | chr2.4:54404092-54404111 | None:intergenic | 35.0% |
| ! | CACGGGATTATTTCTTAATC+TGG | + | chr2.4:54404626-54404645 | MS.gene073390:intron | 35.0% |
| ! | CATTTAATTGAGGTGTCATG+TGG | + | chr2.4:54405720-54405739 | MS.gene073390:intron | 35.0% |
| ! | CTTTTTCCCCAAATGTTACA+TGG | - | chr2.4:54404207-54404226 | None:intergenic | 35.0% |
| ! | GATTTAAGACAGAATTGGGA+AGG | - | chr2.4:54405320-54405339 | None:intergenic | 35.0% |
| ! | GCCATCTAACCATGATTTTA+TGG | - | chr2.4:54405944-54405963 | None:intergenic | 35.0% |
| ! | GCTTGATTGTTGTTGTTGTT+TGG | + | chr2.4:54403668-54403687 | MS.gene073390:intron | 35.0% |
| !! | CTATTGATTTAGAGCAAGGA+TGG | + | chr2.4:54403215-54403234 | MS.gene073390:CDS | 35.0% |
| !! | CTGATTTGAATTTGCTGGAA+AGG | + | chr2.4:54405444-54405463 | MS.gene073390:intron | 35.0% |
| !! | GAAAGTAGTTGGTAGCAAAA+AGG | - | chr2.4:54404270-54404289 | None:intergenic | 35.0% |
| !! | GTCAAGCAGATTTTGCTTTT+AGG | - | chr2.4:54405599-54405618 | None:intergenic | 35.0% |
| !! | TGAGACTGATTTGAATTTGC+TGG | + | chr2.4:54405439-54405458 | MS.gene073390:intron | 35.0% |
| !! | TTCTAAAATACCCAAAGGCT+TGG | + | chr2.4:54407024-54407043 | MS.gene073390:CDS | 35.0% |
| !! | TTGTCCTTATTTCTGGTTGA+GGG | + | chr2.4:54407278-54407297 | MS.gene073390:intron | 35.0% |
| !! | TTTGAATTTGCTGGAAAGGA+TGG | + | chr2.4:54405448-54405467 | MS.gene073390:intron | 35.0% |
| !!! | AAATTCACTTTTTGGGCTTC+AGG | + | chr2.4:54405851-54405870 | MS.gene073390:intron | 35.0% |
| !!! | ACAGTTTTAGACCAAATAGC+TGG | - | chr2.4:54406669-54406688 | None:intergenic | 35.0% |
| AAAAAAAAATACCGGGCGTG+TGG | + | chr2.4:54404574-54404593 | MS.gene073390:intron | 40.0% | |
| AACACCCACTAAACACCTTT+GGG | + | chr2.4:54404344-54404363 | MS.gene073390:intron | 40.0% | |
| AACCCAACATATCCCTTTCT+CGG | - | chr2.4:54408217-54408236 | None:intergenic | 40.0% | |
| AACCGCTGTATGATAAGTAC+AGG | + | chr2.4:54403471-54403490 | MS.gene073390:CDS | 40.0% | |
| ACAAAATGTGGCAAGCAGTT+CGG | - | chr2.4:54408552-54408571 | None:intergenic | 40.0% | |
| ACAGAGAAACTAAGGGAAAG+GGG | - | chr2.4:54404845-54404864 | None:intergenic | 40.0% | |
| ACCGCTGTATGATAAGTACA+GGG | + | chr2.4:54403472-54403491 | MS.gene073390:CDS | 40.0% | |
| AGATGCAGCAAGTAACAAGA+AGG | + | chr2.4:54407237-54407256 | MS.gene073390:CDS | 40.0% | |
| ATATGTTGGGTTACAAGAGC+AGG | + | chr2.4:54408225-54408244 | MS.gene073390:CDS | 40.0% | |
| ATCGATACTTTATTGCTCGG+AGG | + | chr2.4:54405988-54406007 | MS.gene073390:CDS | 40.0% | |
| ATTCTCGAAAGGCTTCAAAC+TGG | + | chr2.4:54406437-54406456 | MS.gene073390:CDS | 40.0% | |
| ATTGTGGCATTCATTACAGG+CGG | + | chr2.4:54406550-54406569 | MS.gene073390:intron | 40.0% | |
| CACAAAATCAAACGGAAGAG+TGG | - | chr2.4:54408128-54408147 | None:intergenic | 40.0% | |
| CATCACATAGACAAACCATC+AGG | - | chr2.4:54407157-54407176 | None:intergenic | 40.0% | |
| CCCAAATGTTACATGGTGTA+TGG | - | chr2.4:54404200-54404219 | None:intergenic | 40.0% | |
| CTATAGAGTAAAGACAGCCT+TGG | - | chr2.4:54405256-54405275 | None:intergenic | 40.0% | |
| CTCAGATCTTGTCTATGGTT+TGG | - | chr2.4:54404242-54404261 | None:intergenic | 40.0% | |
| CTTGAAACGGGAGAAAGATA+GGG | + | chr2.4:54406580-54406599 | MS.gene073390:CDS | 40.0% | |
| GACAAACCACTATTGTTCCA+CGG | - | chr2.4:54404502-54404521 | None:intergenic | 40.0% | |
| GACAAACCATCAGGAATGAA+AGG | - | chr2.4:54407148-54407167 | None:intergenic | 40.0% | |
| GCCATTAACAATATCTGGTG+AGG | + | chr2.4:54404542-54404561 | MS.gene073390:intron | 40.0% | |
| GGAATCAAAATGATCAGCCA+AGG | + | chr2.4:54405236-54405255 | MS.gene073390:intron | 40.0% | |
| GGACTGATTGAGAAAGTAGT+TGG | - | chr2.4:54404281-54404300 | None:intergenic | 40.0% | |
| GGGCGTGTGGAAAAATTATT+GGG | + | chr2.4:54404587-54404606 | MS.gene073390:intron | 40.0% | |
| GTACACTCAGATCTTGTCTA+TGG | - | chr2.4:54404247-54404266 | None:intergenic | 40.0% | |
| GTACTTATCATACAGCGGTT+GGG | - | chr2.4:54403471-54403490 | None:intergenic | 40.0% | |
| GTCTTTGTCCAGTAACTTCT+GGG | - | chr2.4:54407965-54407984 | None:intergenic | 40.0% | |
| TAACCCCTCAACCAGAAATA+AGG | - | chr2.4:54407285-54407304 | None:intergenic | 40.0% | |
| TAACGTGCTACATGACATGA+TGG | + | chr2.4:54407682-54407701 | MS.gene073390:intron | 40.0% | |
| TAATTATCTAGTCCACGTGG+AGG | - | chr2.4:54404024-54404043 | None:intergenic | 40.0% | |
| TATAAACATAACTGTGGGGG+GGG | - | chr2.4:54408033-54408052 | None:intergenic | 40.0% | |
| TATCCTATAGGCTCTTAAGG+AGG | + | chr2.4:54408481-54408500 | MS.gene073390:intron | 40.0% | |
| TCCCTGTACTTATCATACAG+CGG | - | chr2.4:54403476-54403495 | None:intergenic | 40.0% | |
| TGGAAATGAAGAAACCACGA+AGG | - | chr2.4:54406507-54406526 | None:intergenic | 40.0% | |
| TGTACTTATCATACAGCGGT+TGG | - | chr2.4:54403472-54403491 | None:intergenic | 40.0% | |
| TGTCTTTGTCCAGTAACTTC+TGG | - | chr2.4:54407966-54407985 | None:intergenic | 40.0% | |
| TTATGTTGCGAGAACTTGTG+AGG | + | chr2.4:54405907-54405926 | MS.gene073390:CDS | 40.0% | |
| TTCCTCCGCTTAATGAAGTT+GGG | + | chr2.4:54406015-54406034 | MS.gene073390:CDS | 40.0% | |
| TTGTCAAATAGCCGCTATAG+TGG | - | chr2.4:54404458-54404477 | None:intergenic | 40.0% | |
| ! | AGGATGGGATTTTATGCTGA+AGG | + | chr2.4:54403231-54403250 | MS.gene073390:CDS | 40.0% |
| ! | CAATAATTTTTCCACACGCC+CGG | - | chr2.4:54404588-54404607 | None:intergenic | 40.0% |
| ! | CTCAAGGTATTATTCCTTCG+TGG | + | chr2.4:54406490-54406509 | MS.gene073390:intron | 40.0% |
| ! | GGATGGGATTTTATGCTGAA+GGG | + | chr2.4:54403232-54403251 | MS.gene073390:CDS | 40.0% |
| ! | GTGGGCTAACCATAAAATCA+TGG | + | chr2.4:54405932-54405951 | MS.gene073390:CDS | 40.0% |
| !! | CAATCCCAAAGGTGTTTAGT+GGG | - | chr2.4:54404351-54404370 | None:intergenic | 40.0% |
| !! | CATTATAGGGCTATTGGCTT+AGG | + | chr2.4:54403801-54403820 | MS.gene073390:intron | 40.0% |
| !! | CTTAGGTTGAAGACTTGTCA+AGG | + | chr2.4:54406987-54407006 | MS.gene073390:intron | 40.0% |
| !! | GACATGATGGACAAACAATC+TGG | + | chr2.4:54407695-54407714 | MS.gene073390:intron | 40.0% |
| !! | GAGATCAGTTTTGTCAATCG+CGG | + | chr2.4:54404379-54404398 | MS.gene073390:intron | 40.0% |
| !! | GATTTATTTTTCTTGGGGGG+TGG | + | chr2.4:54405673-54405692 | MS.gene073390:intron | 40.0% |
| !! | GTTGTCCTTATTTCTGGTTG+AGG | + | chr2.4:54407277-54407296 | MS.gene073390:intron | 40.0% |
| !! | TGAGATTGGTCTCTTTCTTC+AGG | + | chr2.4:54408311-54408330 | MS.gene073390:intron | 40.0% |
| !! | TGTCCTTATTTCTGGTTGAG+GGG | + | chr2.4:54407279-54407298 | MS.gene073390:intron | 40.0% |
| !! | TTGACTTTTTGAGCCAACGA+TGG | + | chr2.4:54407990-54408009 | MS.gene073390:intron | 40.0% |
| AAAATGTCTGCAGCCGAGAA+AGG | + | chr2.4:54408201-54408220 | MS.gene073390:intron | 45.0% | |
| AAATGTCTGCAGCCGAGAAA+GGG | + | chr2.4:54408202-54408221 | MS.gene073390:intron | 45.0% | |
| AAATTGAAGCAGCTTGGACC+AGG | + | chr2.4:54404689-54404708 | MS.gene073390:intron | 45.0% | |
| AACAGTCGTTCACATATGCC+AGG | - | chr2.4:54408375-54408394 | None:intergenic | 45.0% | |
| AAGCCTCCTTAAGAGCCTAT+AGG | - | chr2.4:54408487-54408506 | None:intergenic | 45.0% | |
| ACAGAATTGGGAAGGAGAGT+CGG | - | chr2.4:54405312-54405331 | None:intergenic | 45.0% | |
| AGCCGAGAAAGGGATATGTT+GGG | + | chr2.4:54408212-54408231 | MS.gene073390:intron | 45.0% | |
| AGCGGTTGGGAATAGTCATT+TGG | - | chr2.4:54403458-54403477 | None:intergenic | 45.0% | |
| AGCTGAAAGATCGTAACTCG+AGG | - | chr2.4:54405165-54405184 | None:intergenic | 45.0% | |
| ATAAACATAACTGTGGGGGG+GGG | - | chr2.4:54408032-54408051 | None:intergenic | 45.0% | |
| CAACACCCACTAAACACCTT+TGG | + | chr2.4:54404343-54404362 | MS.gene073390:intron | 45.0% | |
| CACCAACGTTGTACCTTCTT+CGG | - | chr2.4:54407206-54407225 | None:intergenic | 45.0% | |
| CGCGGATAGCTGAAAATAGT+GGG | + | chr2.4:54404397-54404416 | MS.gene073390:intron | 45.0% | |
| CGGGCGTGTGGAAAAATTAT+TGG | + | chr2.4:54404586-54404605 | MS.gene073390:intron | 45.0% | |
| CTATGGAAGACATGAGACAC+TGG | - | chr2.4:54404163-54404182 | None:intergenic | 45.0% | |
| CTTCCTCCGCTTAATGAAGT+TGG | + | chr2.4:54406014-54406033 | MS.gene073390:CDS | 45.0% | |
| GAAACAGGATCCAAGCCTTT+GGG | - | chr2.4:54407037-54407056 | None:intergenic | 45.0% | |
| GACTCGTTGTGCTCATCAAA+AGG | + | chr2.4:54407913-54407932 | MS.gene073390:CDS | 45.0% | |
| GCAGCTATAGTAGCCGAATT+TGG | - | chr2.4:54404524-54404543 | None:intergenic | 45.0% | |
| GCTGTATGATAAGTACAGGG+AGG | + | chr2.4:54403475-54403494 | MS.gene073390:CDS | 45.0% | |
| GCTTGAAACGGGAGAAAGAT+AGG | + | chr2.4:54406579-54406598 | MS.gene073390:CDS | 45.0% | |
| GGTTGGGAATAGTCATTTGG+AGG | - | chr2.4:54403455-54403474 | None:intergenic | 45.0% | |
| GTCAGCCCAACTTCATTAAG+CGG | - | chr2.4:54406023-54406042 | None:intergenic | 45.0% | |
| GTGCTATAGCACCACTATAG+CGG | + | chr2.4:54404444-54404463 | MS.gene073390:intron | 45.0% | |
| TAGCGAGCCCAAGTTATTAG+AGG | + | chr2.4:54406625-54406644 | MS.gene073390:CDS | 45.0% | |
| TCAAACTCGTGTGGCTCAAA+TGG | - | chr2.4:54407614-54407633 | None:intergenic | 45.0% | |
| TCGAGTTACGATCTTTCAGC+TGG | + | chr2.4:54405164-54405183 | MS.gene073390:intron | 45.0% | |
| TCGCGGATAGCTGAAAATAG+TGG | + | chr2.4:54404396-54404415 | MS.gene073390:intron | 45.0% | |
| TCGTGCTTCTCTCTCAAAGA+AGG | - | chr2.4:54405882-54405901 | None:intergenic | 45.0% | |
| TTGTACTAAATAGCGTGCCG+TGG | + | chr2.4:54404482-54404501 | MS.gene073390:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2.4:54403652-54403671 | None:intergenic | 45.0% |
| ! | AAGGAGAGTCGGAGTCTTTT+GGG | - | chr2.4:54405301-54405320 | None:intergenic | 45.0% |
| ! | AGGTACAACGTTGGTGAAGT+TGG | + | chr2.4:54407210-54407229 | MS.gene073390:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2.4:54403653-54403672 | None:intergenic | 45.0% |
| ! | GGCTTCAATGCCGATTATTG+CGG | - | chr2.4:54407342-54407361 | None:intergenic | 45.0% |
| ! | TACCGAAGAAGGTACAACGT+TGG | + | chr2.4:54407201-54407220 | MS.gene073390:CDS | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | - | chr2.4:54403654-54403673 | None:intergenic | 45.0% |
| !! | CAAAGGTGTTTAGTGGGTGT+TGG | - | chr2.4:54404345-54404364 | None:intergenic | 45.0% |
| !! | CCAATCCCAAAGGTGTTTAG+TGG | - | chr2.4:54404352-54404371 | None:intergenic | 45.0% |
| !! | CCACTAAACACCTTTGGGAT+TGG | + | chr2.4:54404349-54404368 | MS.gene073390:intron | 45.0% |
| !! | GACTGGTCTGTGTCTCTTAA+AGG | + | chr2.4:54405554-54405573 | MS.gene073390:intron | 45.0% |
| !! | GCTGACTTGCTTTCGTGATT+TGG | + | chr2.4:54406037-54406056 | MS.gene073390:CDS | 45.0% |
| !! | TAAGTACAGGGAGGCATTTG+AGG | + | chr2.4:54403484-54403503 | MS.gene073390:CDS | 45.0% |
| !! | TATTGCAACAAGGGTGTTGC+TGG | + | chr2.4:54408515-54408534 | MS.gene073390:CDS | 45.0% |
| !! | TGCAGAAGTGTCTTTGAGCA+TGG | - | chr2.4:54406413-54406432 | None:intergenic | 45.0% |
| !!! | TGGGTTTTGTTTGAGCTCTG+AGG | + | chr2.4:54403369-54403388 | MS.gene073390:intron | 45.0% |
| !! | TAAAAAAAAAAAAAAAACAT+TGG | - | chr2.4:54406133-54406152 | None:intergenic | 5.0% |
| AGAGCTGCATGACAAGTACC+TGG | + | chr2.4:54408354-54408373 | MS.gene073390:CDS | 50.0% | |
| AGCCCAACTTCATTAAGCGG+AGG | - | chr2.4:54406020-54406039 | None:intergenic | 50.0% | |
| CACAACTCGCAACAGACAAG+TGG | - | chr2.4:54404302-54404321 | None:intergenic | 50.0% | |
| CAGCCGAGAAAGGGATATGT+TGG | + | chr2.4:54408211-54408230 | MS.gene073390:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr2.4:54403648-54403667 | None:intergenic | 50.0% | |
| GAAGACATGAGACACTGGTC+TGG | - | chr2.4:54404158-54404177 | None:intergenic | 50.0% | |
| GGAAACAGGATCCAAGCCTT+TGG | - | chr2.4:54407038-54407057 | None:intergenic | 50.0% | |
| GGAGATTGGAATGGGGCATA+TGG | + | chr2.4:54406360-54406379 | MS.gene073390:CDS | 50.0% | |
| GGGTCGGCTACATTGATCAA+AGG | - | chr2.4:54403632-54403651 | None:intergenic | 50.0% | |
| GTAACTCGAGGATCATAGCG+TGG | - | chr2.4:54405153-54405172 | None:intergenic | 50.0% | |
| TAAACATAACTGTGGGGGGG+GGG | - | chr2.4:54408031-54408050 | None:intergenic | 50.0% | |
| TAGTCCTCAGAGCTGAACTG+AGG | - | chr2.4:54403298-54403317 | None:intergenic | 50.0% | |
| TCAGAGCTGAACTGAGGTTC+AGG | - | chr2.4:54403292-54403311 | None:intergenic | 50.0% | |
| TGAACCTCAGTTCAGCTCTG+AGG | + | chr2.4:54403291-54403310 | MS.gene073390:CDS | 50.0% | |
| TGGAACATTCAACCTCCACG+TGG | + | chr2.4:54404009-54404028 | MS.gene073390:intron | 50.0% | |
| TGTTGCGAGAACTTGTGAGG+AGG | + | chr2.4:54405910-54405929 | MS.gene073390:CDS | 50.0% | |
| ! | ATTTTTCTTGGGGGGTGGAG+TGG | + | chr2.4:54405678-54405697 | MS.gene073390:intron | 50.0% |
| ! | GAAGGAGAGTCGGAGTCTTT+TGG | - | chr2.4:54405302-54405321 | None:intergenic | 50.0% |
| ! | TGTGGTTAGTTGTGTGGCTG+CGG | - | chr2.4:54404086-54404105 | None:intergenic | 50.0% |
| !! | AACACCTTTGGGATTGGACG+TGG | + | chr2.4:54404355-54404374 | MS.gene073390:intron | 50.0% |
| !! | GAGTGGTAAGAGGTGTCATG+TGG | + | chr2.4:54405695-54405714 | MS.gene073390:intron | 50.0% |
| !! | GATCGTGAGTTGGTTTGCAC+GGG | + | chr2.4:54404609-54404628 | MS.gene073390:intron | 50.0% |
| !! | GGATCGTGAGTTGGTTTGCA+CGG | + | chr2.4:54404608-54404627 | MS.gene073390:intron | 50.0% |
| AAACATAACTGTGGGGGGGG+GGG | - | chr2.4:54408030-54408049 | None:intergenic | 55.0% | |
| AGCGTGCCGTGGAACAATAG+TGG | + | chr2.4:54404493-54404512 | MS.gene073390:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr2.4:54403639-54403658 | MS.gene073390:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr2.4:54403646-54403665 | MS.gene073390:intron | 55.0% | |
| CTCACCACGTCCAATCCCAA+AGG | - | chr2.4:54404362-54404381 | None:intergenic | 55.0% | |
| GCGAGAACTTGTGAGGAGGT+GGG | + | chr2.4:54405914-54405933 | MS.gene073390:CDS | 55.0% | |
| GTGGCATTCATTACAGGCGG+AGG | + | chr2.4:54406553-54406572 | MS.gene073390:intron | 55.0% | |
| TGCGAGAACTTGTGAGGAGG+TGG | + | chr2.4:54405913-54405932 | MS.gene073390:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr2.4:54403640-54403659 | MS.gene073390:intron | 55.0% | |
| !! | AGGCGGAGGAGTGCTTGAAA+CGG | + | chr2.4:54406567-54406586 | MS.gene073390:intron | 55.0% |
| AACATAACTGTGGGGGGGGG+GGG | - | chr2.4:54408029-54408048 | None:intergenic | 60.0% | |
| TGGGCTCGCTACTAGAGTGC+AGG | - | chr2.4:54406616-54406635 | None:intergenic | 60.0% | |
| TTGGGGGGTGGAGTGGTAAG+AGG | + | chr2.4:54405685-54405704 | MS.gene073390:intron | 60.0% | |
| !! | GGCGGAGGAGTGCTTGAAAC+GGG | + | chr2.4:54406568-54406587 | MS.gene073390:intron | 60.0% |
| TCGCAGTTGCTGCCGGAGGA+GGG | - | chr2.4:54404818-54404837 | None:intergenic | 65.0% | |
| AGCGTCGCAGTTGCTGCCGG+AGG | - | chr2.4:54404822-54404841 | None:intergenic | 70.0% | |
| CCACCTCTCACGCCCTCCTC+CGG | + | chr2.4:54404803-54404822 | MS.gene073390:intron | 70.0% | |
| GTCGCAGTTGCTGCCGGAGG+AGG | - | chr2.4:54404819-54404838 | None:intergenic | 70.0% | |
| !! | GGGAGCGTCGCAGTTGCTGC+CGG | - | chr2.4:54404825-54404844 | None:intergenic | 70.0% |
| !! | TCGCAGTCGCGCTGGCTGAG+AGG | - | chr2.4:54404781-54404800 | None:intergenic | 70.0% |
| AGGTGGCGTCGCAGTCGCGC+TGG | - | chr2.4:54404789-54404808 | None:intergenic | 75.0% | |
| ! | CCGGAGGAGGGCGTGAGAGG+TGG | - | chr2.4:54404806-54404825 | None:intergenic | 75.0% |
| ! | CTGCCGGAGGAGGGCGTGAG+AGG | - | chr2.4:54404809-54404828 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 54403199 | 54408601 | 54403199 | ID=MS.gene073390 |
| chr2.4 | mRNA | 54403199 | 54408601 | 54403199 | ID=MS.gene073390.t1;Parent=MS.gene073390 |
| chr2.4 | exon | 54403199 | 54403332 | 54403199 | ID=MS.gene073390.t1.exon1;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54403199 | 54403332 | 54403199 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54403424 | 54403523 | 54403424 | ID=MS.gene073390.t1.exon2;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54403424 | 54403523 | 54403424 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54405873 | 54406058 | 54405873 | ID=MS.gene073390.t1.exon3;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54405873 | 54406058 | 54405873 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54406163 | 54406210 | 54406163 | ID=MS.gene073390.t1.exon4;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54406163 | 54406210 | 54406163 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54406292 | 54406495 | 54406292 | ID=MS.gene073390.t1.exon5;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54406292 | 54406495 | 54406292 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54406569 | 54406646 | 54406569 | ID=MS.gene073390.t1.exon6;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54406569 | 54406646 | 54406569 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54406818 | 54406907 | 54406818 | ID=MS.gene073390.t1.exon7;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54406818 | 54406907 | 54406818 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54406992 | 54407072 | 54406992 | ID=MS.gene073390.t1.exon8;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54406992 | 54407072 | 54406992 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54407196 | 54407258 | 54407196 | ID=MS.gene073390.t1.exon9;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54407196 | 54407258 | 54407196 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54407871 | 54407968 | 54407871 | ID=MS.gene073390.t1.exon10;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54407871 | 54407968 | 54407871 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54408214 | 54408246 | 54408214 | ID=MS.gene073390.t1.exon11;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54408214 | 54408246 | 54408214 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54408333 | 54408420 | 54408333 | ID=MS.gene073390.t1.exon12;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54408333 | 54408420 | 54408333 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| chr2.4 | exon | 54408491 | 54408601 | 54408491 | ID=MS.gene073390.t1.exon13;Parent=MS.gene073390.t1 |
| chr2.4 | CDS | 54408491 | 54408601 | 54408491 | ID=cds.MS.gene073390.t1;Parent=MS.gene073390.t1 |
| Gene Sequence |
| Protein sequence |
