Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073962.t1 | XP_003609484.1 | 92.7 | 259 | 16 | 2 | 1 | 259 | 1 | 256 | 7.00E-111 | 410.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073962.t1 | G7JGM1 | 92.7 | 259 | 16 | 2 | 1 | 259 | 1 | 256 | 5.1e-111 | 410.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene073962 | 0.81518 | 1.05E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene073962 | 0.817622 | 3.00E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene073962 | 0.839913 | 1.19E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene073962 | 0.811074 | 8.40E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene073962 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene049599 | MS.gene073962 | -0.838613 | 2.59E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene073962 | 0.905957 | 2.48E-80 | -1.69E-46 |
| MS.gene049910 | MS.gene073962 | 0.805237 | 1.47E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene073962 | 0.814979 | 1.17E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene073962 | 0.831 | 2.14E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene073962 | 0.823754 | 1.17E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene073962 | 0.82672 | 2.32E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene073962 | 0.807564 | 4.75E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene073962 | 0.857605 | 1.46E-62 | -1.69E-46 |
| MS.gene050319 | MS.gene073962 | -0.840153 | 1.03E-57 | -1.69E-46 |
| MS.gene050330 | MS.gene073962 | -0.822355 | 2.48E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene073962 | 0.810489 | 1.12E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene073962 | 0.802256 | 6.12E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene073962 | 0.822114 | 2.82E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene073962 | -0.850017 | 2.23E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene073962 | 0.827318 | 1.67E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene073962 | 0.822937 | 1.81E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene073962 | 0.824379 | 8.33E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene073962 | 0.81102 | 8.63E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene073962 | -0.851147 | 1.07E-60 | -1.69E-46 |
| MS.gene051471 | MS.gene073962 | 0.843735 | 1.17E-58 | -1.69E-46 |
| MS.gene051662 | MS.gene073962 | 0.872502 | 3.03E-67 | -1.69E-46 |
| MS.gene051663 | MS.gene073962 | 0.869563 | 2.82E-66 | -1.69E-46 |
| MS.gene051860 | MS.gene073962 | 0.840306 | 9.41E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene073962 | 0.821303 | 4.34E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene073962 | 0.819853 | 9.34E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene073962 | 0.840727 | 7.31E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene073962 | 0.848233 | 6.98E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene073962 | 0.822337 | 2.50E-53 | -1.69E-46 |
| MS.gene052207 | MS.gene073962 | 0.811019 | 8.63E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene073962 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene052309 | MS.gene073962 | -0.852028 | 6.04E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene073962 | 0.815223 | 1.03E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene073962 | 0.817453 | 3.27E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene073962 | 0.818937 | 1.51E-52 | -1.69E-46 |
| MS.gene052856 | MS.gene073962 | 0.805575 | 1.25E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene073962 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene073962 | 0.824744 | 6.84E-54 | -1.69E-46 |
| MS.gene053559 | MS.gene073962 | 0.834146 | 3.55E-56 | -1.69E-46 |
| MS.gene053630 | MS.gene073962 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene073962 | 0.908931 | 9.96E-82 | -1.69E-46 |
| MS.gene053907 | MS.gene073962 | 0.826824 | 2.19E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene073962 | 0.802847 | 4.62E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene073962 | 0.824006 | 1.02E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene073962 | 0.838921 | 2.16E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene073962 | 0.807088 | 6.00E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene073962 | 0.813992 | 1.93E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene073962 | 0.881827 | 1.74E-70 | -1.69E-46 |
| MS.gene054942 | MS.gene073962 | 0.840024 | 1.12E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene073962 | 0.822907 | 1.84E-53 | -1.69E-46 |
| MS.gene055133 | MS.gene073962 | 0.820778 | 5.73E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene073962 | 0.862446 | 5.04E-64 | -1.69E-46 |
| MS.gene055390 | MS.gene073962 | 0.834018 | 3.82E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene073962 | 0.868931 | 4.52E-66 | -1.69E-46 |
| MS.gene055428 | MS.gene073962 | 0.872827 | 2.36E-67 | -1.69E-46 |
| MS.gene055604 | MS.gene073962 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene073962 | 0.827913 | 1.20E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene073962 | 0.815037 | 1.13E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene073962 | -0.862459 | 4.99E-64 | -1.69E-46 |
| MS.gene056314 | MS.gene073962 | 0.830802 | 2.39E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene073962 | 0.852308 | 5.03E-61 | -1.69E-46 |
| MS.gene056875 | MS.gene073962 | 0.816946 | 4.26E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene073962 | 0.818234 | 2.18E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene073962 | 0.837538 | 4.90E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene073962 | 0.842035 | 3.31E-58 | -1.69E-46 |
| MS.gene057245 | MS.gene073962 | 0.823182 | 1.59E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene073962 | 0.826645 | 2.42E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene073962 | 0.858302 | 9.04E-63 | -1.69E-46 |
| MS.gene057448 | MS.gene073962 | 0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene073962 | 0.81636 | 5.76E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene073962 | 0.817476 | 3.23E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene073962 | 0.856783 | 2.55E-62 | -1.69E-46 |
| MS.gene058082 | MS.gene073962 | 0.8176 | 3.03E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene073962 | 0.851755 | 7.22E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene073962 | 0.824697 | 7.01E-54 | -1.69E-46 |
| MS.gene058182 | MS.gene073962 | 0.824914 | 6.24E-54 | -1.69E-46 |
| MS.gene058201 | MS.gene073962 | 0.836464 | 9.22E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene073962 | 0.819027 | 1.44E-52 | -1.69E-46 |
| MS.gene058661 | MS.gene073962 | -0.8679 | 9.73E-66 | -1.69E-46 |
| MS.gene058710 | MS.gene073962 | 0.814495 | 1.50E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene073962 | 0.850518 | 1.61E-60 | -1.69E-46 |
| MS.gene058833 | MS.gene073962 | 0.811109 | 8.25E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene073962 | 0.8557 | 5.29E-62 | -1.69E-46 |
| MS.gene059033 | MS.gene073962 | -0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene073962 | 0.840302 | 9.43E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene073962 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene073962 | 0.826169 | 3.14E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene073962 | 0.86063 | 1.81E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene073962 | 0.851083 | 1.12E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene073962 | 0.808163 | 3.55E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene073962 | 0.801943 | 7.09E-49 | -1.69E-46 |
| MS.gene059708 | MS.gene073962 | 0.801648 | 8.15E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene073962 | 0.856581 | 2.92E-62 | -1.69E-46 |
| MS.gene059894 | MS.gene073962 | 0.889249 | 2.87E-73 | -1.69E-46 |
| MS.gene059899 | MS.gene073962 | 0.863121 | 3.12E-64 | -1.69E-46 |
| MS.gene060084 | MS.gene073962 | 0.82013 | 8.07E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene073962 | 0.853105 | 2.98E-61 | -1.69E-46 |
| MS.gene060476 | MS.gene073962 | 0.868755 | 5.16E-66 | -1.69E-46 |
| MS.gene060495 | MS.gene073962 | 0.813199 | 2.89E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene073962 | 0.871126 | 8.66E-67 | -1.69E-46 |
| MS.gene061051 | MS.gene073962 | -0.811118 | 8.22E-51 | -1.69E-46 |
| MS.gene061112 | MS.gene073962 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene061113 | MS.gene073962 | 0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene061265 | MS.gene073962 | 0.820173 | 7.89E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073962.t1 | MTR_4g116200 | 96.525 | 259 | 6 | 2 | 1 | 259 | 1 | 256 | 0.0 | 516 |
| MS.gene073962.t1 | MTR_2g450720 | 53.208 | 265 | 92 | 9 | 1 | 259 | 1 | 239 | 4.98e-83 | 248 |
| MS.gene073962.t1 | MTR_4g009760 | 48.667 | 150 | 68 | 4 | 1 | 142 | 1 | 149 | 2.95e-37 | 130 |
| MS.gene073962.t1 | MTR_2g104230 | 45.625 | 160 | 70 | 6 | 1 | 146 | 1 | 157 | 7.77e-33 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073962.t1 | AT2G12462 | 33.929 | 280 | 133 | 13 | 1 | 259 | 1 | 249 | 9.64e-34 | 122 |
| MS.gene073962.t1 | AT1G15760 | 39.157 | 166 | 87 | 3 | 3 | 162 | 5 | 162 | 5.12e-31 | 114 |
| MS.gene073962.t1 | AT1G80520 | 51.923 | 104 | 43 | 2 | 1 | 98 | 1 | 103 | 4.48e-29 | 109 |
Find 48 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCAATGCTTTATTATTT+TGG | 0.098715 | 8.3:+9891941 | None:intergenic |
| TCACCTTTGGGTTTATTATA+AGG | 0.198904 | 8.3:+9891709 | None:intergenic |
| TCAATAGCCCTACTTCTTAA+TGG | 0.233145 | 8.3:+9891856 | None:intergenic |
| CCATCTAATGGTCCTGAATA+TGG | 0.284057 | 8.3:+9891988 | None:intergenic |
| ATCAAAATCAAAATCACCTT+TGG | 0.295369 | 8.3:+9891696 | None:intergenic |
| AATAAAGCATTGAAGTTATC+AGG | 0.300318 | 8.3:-9891934 | MS.gene073962:CDS |
| CATTCACTCATATATGATTA+TGG | 0.310367 | 8.3:-9892363 | MS.gene073962:CDS |
| GAGAATCTCTAGTCTGTGTT+TGG | 0.350721 | 8.3:+9892254 | None:intergenic |
| TTCATCAATCTTCCATCAAT+TGG | 0.355382 | 8.3:+9891910 | None:intergenic |
| ACAGAATTCCTTGTAATAGT+TGG | 0.363635 | 8.3:+9891763 | None:intergenic |
| AGCAGAACAATGCCATATTC+AGG | 0.374090 | 8.3:-9892000 | MS.gene073962:CDS |
| TTCCAACTGAAGCTCATTGC+GGG | 0.374523 | 8.3:+9892329 | None:intergenic |
| TCAAAATCAAAATCACCTTT+GGG | 0.389288 | 8.3:+9891697 | None:intergenic |
| TCCAAGAGTATCTGGTCCTT+TGG | 0.396596 | 8.3:-9891815 | MS.gene073962:CDS |
| TCATGCATTCTTCCATCTAA+TGG | 0.401833 | 8.3:+9891976 | None:intergenic |
| AAGTTATCAGGACCAATTGA+TGG | 0.410093 | 8.3:-9891922 | MS.gene073962:CDS |
| CCATATTCAGGACCATTAGA+TGG | 0.411197 | 8.3:-9891988 | MS.gene073962:CDS |
| ACCAAGAGTCCAAGAGTATC+TGG | 0.415806 | 8.3:-9891823 | MS.gene073962:CDS |
| ATAGAAGTCCATTAAGAAGT+AGG | 0.426654 | 8.3:-9891864 | MS.gene073962:CDS |
| ACCAGATACTCTTGGACTCT+TGG | 0.427252 | 8.3:+9891822 | None:intergenic |
| ATTGTTCTGCTTCTATACAT+AGG | 0.436227 | 8.3:+9892012 | None:intergenic |
| AAGAATGCATGAGCAGAAAA+TGG | 0.442330 | 8.3:-9891965 | MS.gene073962:CDS |
| TGGTTCTACACGAACCGAAT+TGG | 0.445561 | 8.3:-9892089 | MS.gene073962:CDS |
| TGTTGAAACTGATAGCCCTA+TGG | 0.446699 | 8.3:-9891743 | MS.gene073962:CDS |
| TTAAGAAGTAGGGCTATTGA+TGG | 0.487712 | 8.3:-9891853 | MS.gene073962:CDS |
| TCGTGTAGAACCACAGGTAA+AGG | 0.487940 | 8.3:+9892099 | None:intergenic |
| CATAATCATATATGAGTGAA+TGG | 0.492231 | 8.3:+9892364 | None:intergenic |
| CCATGCTTTGTAGAAACTCA+TGG | 0.497469 | 8.3:+9892289 | None:intergenic |
| TTGATGATGAACATTCACTT+TGG | 0.513853 | 8.3:-9891678 | MS.gene073962:CDS |
| GTTGAAACTGATAGCCCTAT+GGG | 0.514418 | 8.3:-9891742 | MS.gene073962:CDS |
| CCATGAGTTTCTACAAAGCA+TGG | 0.527981 | 8.3:-9892289 | MS.gene073962:CDS |
| TAGAAGTCCATTAAGAAGTA+GGG | 0.530916 | 8.3:-9891863 | MS.gene073962:CDS |
| TCCAAAGGACCAGATACTCT+TGG | 0.532457 | 8.3:+9891814 | None:intergenic |
| TTCCCGCAATGAGCTTCAGT+TGG | 0.551524 | 8.3:-9892331 | MS.gene073962:CDS |
| TTCGGTTCGTGTAGAACCAC+AGG | 0.553276 | 8.3:+9892093 | None:intergenic |
| TAAGGACTACTATAACCCAT+AGG | 0.553316 | 8.3:+9891727 | None:intergenic |
| CATGAGTTTCTACAAAGCAT+GGG | 0.601787 | 8.3:-9892288 | MS.gene073962:CDS |
| CTTCCAACTGAAGCTCATTG+CGG | 0.606732 | 8.3:+9892328 | None:intergenic |
| ATTGATGAATGAGAGAATGA+TGG | 0.606802 | 8.3:-9891896 | MS.gene073962:CDS |
| AAGGACTACTATAACCCATA+GGG | 0.607941 | 8.3:+9891728 | None:intergenic |
| TTAAGATCTTGAAAGAGTGT+AGG | 0.613928 | 8.3:+9891655 | None:intergenic |
| TAACCATGAAAACCAGTCCA+TGG | 0.615491 | 8.3:+9892404 | None:intergenic |
| AGTCCTTATAATAAACCCAA+AGG | 0.617768 | 8.3:-9891712 | MS.gene073962:CDS |
| ATGGAGAGGAGCATTGGTCA+AGG | 0.622754 | 8.3:-9892052 | MS.gene073962:CDS |
| GCTCATTGCGGGAAAAGATG+AGG | 0.624567 | 8.3:+9892340 | None:intergenic |
| ACGAACCGAATTGGTACCAA+GGG | 0.628752 | 8.3:-9892080 | MS.gene073962:CDS |
| ATAGAAGTCCAACTATTACA+AGG | 0.630633 | 8.3:-9891771 | MS.gene073962:CDS |
| CACGAACCGAATTGGTACCA+AGG | 0.659621 | 8.3:-9892081 | MS.gene073962:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTCAATGCTTTATTATTT+TGG | + | chr8.3:9892109-9892128 | None:intergenic | 20.0% |
| !!! | TTTTTTTAGACACTTTTTGA+TGG | + | chr8.3:9891880-9891899 | None:intergenic | 20.0% |
| ! | ATCAAAATCAAAATCACCTT+TGG | + | chr8.3:9892354-9892373 | None:intergenic | 25.0% |
| ! | CATAATCATATATGAGTGAA+TGG | + | chr8.3:9891686-9891705 | None:intergenic | 25.0% |
| ! | CATTCACTCATATATGATTA+TGG | - | chr8.3:9891684-9891703 | MS.gene073962:CDS | 25.0% |
| ! | TCAAAATCAAAATCACCTTT+GGG | + | chr8.3:9892353-9892372 | None:intergenic | 25.0% |
| !!! | AATAAAGCATTGAAGTTATC+AGG | - | chr8.3:9892113-9892132 | MS.gene073962:CDS | 25.0% |
| ACAGAATTCCTTGTAATAGT+TGG | + | chr8.3:9892287-9892306 | None:intergenic | 30.0% | |
| AGTCCTTATAATAAACCCAA+AGG | - | chr8.3:9892335-9892354 | MS.gene073962:CDS | 30.0% | |
| ATAGAAGTCCAACTATTACA+AGG | - | chr8.3:9892276-9892295 | MS.gene073962:CDS | 30.0% | |
| ATAGAAGTCCATTAAGAAGT+AGG | - | chr8.3:9892183-9892202 | MS.gene073962:CDS | 30.0% | |
| ATTGATGAATGAGAGAATGA+TGG | - | chr8.3:9892151-9892170 | MS.gene073962:CDS | 30.0% | |
| ATTGTTCTGCTTCTATACAT+AGG | + | chr8.3:9892038-9892057 | None:intergenic | 30.0% | |
| TAGAAGTCCATTAAGAAGTA+GGG | - | chr8.3:9892184-9892203 | MS.gene073962:CDS | 30.0% | |
| TTCATCAATCTTCCATCAAT+TGG | + | chr8.3:9892140-9892159 | None:intergenic | 30.0% | |
| ! | TCACCTTTGGGTTTATTATA+AGG | + | chr8.3:9892341-9892360 | None:intergenic | 30.0% |
| ! | TTAAGATCTTGAAAGAGTGT+AGG | + | chr8.3:9892395-9892414 | None:intergenic | 30.0% |
| !! | AACATGATTTTAGCATCCAA+AGG | + | chr8.3:9892251-9892270 | None:intergenic | 30.0% |
| !! | TTGATGATGAACATTCACTT+TGG | - | chr8.3:9892369-9892388 | MS.gene073962:CDS | 30.0% |
| AAGAATGCATGAGCAGAAAA+TGG | - | chr8.3:9892082-9892101 | MS.gene073962:CDS | 35.0% | |
| AAGGACTACTATAACCCATA+GGG | + | chr8.3:9892322-9892341 | None:intergenic | 35.0% | |
| AAGTTATCAGGACCAATTGA+TGG | - | chr8.3:9892125-9892144 | MS.gene073962:CDS | 35.0% | |
| CATGAGTTTCTACAAAGCAT+GGG | - | chr8.3:9891759-9891778 | MS.gene073962:CDS | 35.0% | |
| TAAGGACTACTATAACCCAT+AGG | + | chr8.3:9892323-9892342 | None:intergenic | 35.0% | |
| TCAATAGCCCTACTTCTTAA+TGG | + | chr8.3:9892194-9892213 | None:intergenic | 35.0% | |
| TCATGCATTCTTCCATCTAA+TGG | + | chr8.3:9892074-9892093 | None:intergenic | 35.0% | |
| TTAAGAAGTAGGGCTATTGA+TGG | - | chr8.3:9892194-9892213 | MS.gene073962:CDS | 35.0% | |
| TTACGACCAAAAAACCTTTC+TGG | - | chr8.3:9891852-9891871 | MS.gene073962:CDS | 35.0% | |
| !! | ACTTTTTGATGGTACCAGAA+AGG | + | chr8.3:9891869-9891888 | None:intergenic | 35.0% |
| !!! | ATGGTACCAGAAAGGTTTTT+TGG | + | chr8.3:9891861-9891880 | None:intergenic | 35.0% |
| !!! | GAAAGGTTTTTTGGTCGTAA+TGG | + | chr8.3:9891852-9891871 | None:intergenic | 35.0% |
| AGCAGAACAATGCCATATTC+AGG | - | chr8.3:9892047-9892066 | MS.gene073962:CDS | 40.0% | |
| ATTGGTACCAAGGGCAAAAA+TGG | - | chr8.3:9891976-9891995 | MS.gene073962:CDS | 40.0% | |
| CCATATTCAGGACCATTAGA+TGG | - | chr8.3:9892059-9892078 | MS.gene073962:CDS | 40.0% | |
| CCATCTAATGGTCCTGAATA+TGG | + | chr8.3:9892062-9892081 | None:intergenic | 40.0% | |
| CCATGAGTTTCTACAAAGCA+TGG | - | chr8.3:9891758-9891777 | MS.gene073962:CDS | 40.0% | |
| CCATGCTTTGTAGAAACTCA+TGG | + | chr8.3:9891761-9891780 | None:intergenic | 40.0% | |
| GAAAAACATGCCTTTACCTG+TGG | - | chr8.3:9891938-9891957 | MS.gene073962:CDS | 40.0% | |
| GAGAATCTCTAGTCTGTGTT+TGG | + | chr8.3:9891796-9891815 | None:intergenic | 40.0% | |
| GTTGAAACTGATAGCCCTAT+GGG | - | chr8.3:9892305-9892324 | MS.gene073962:CDS | 40.0% | |
| TGTTGAAACTGATAGCCCTA+TGG | - | chr8.3:9892304-9892323 | MS.gene073962:CDS | 40.0% | |
| ! | TTTTGCCCTTGGTACCAATT+CGG | + | chr8.3:9891975-9891994 | None:intergenic | 40.0% |
| ACCAGATACTCTTGGACTCT+TGG | + | chr8.3:9892228-9892247 | None:intergenic | 45.0% | |
| ACGAACCGAATTGGTACCAA+GGG | - | chr8.3:9891967-9891986 | MS.gene073962:CDS | 45.0% | |
| CTTCCAACTGAAGCTCATTG+CGG | + | chr8.3:9891722-9891741 | None:intergenic | 45.0% | |
| TACCAAGGGCAAAAATGGAG+AGG | - | chr8.3:9891981-9892000 | MS.gene073962:CDS | 45.0% | |
| TCCAAAGGACCAGATACTCT+TGG | + | chr8.3:9892236-9892255 | None:intergenic | 45.0% | |
| TCGTGTAGAACCACAGGTAA+AGG | + | chr8.3:9891951-9891970 | None:intergenic | 45.0% | |
| TTCCAACTGAAGCTCATTGC+GGG | + | chr8.3:9891721-9891740 | None:intergenic | 45.0% | |
| ! | GCAAAAATGGAGAGGAGCAT+TGG | - | chr8.3:9891989-9892008 | MS.gene073962:CDS | 45.0% |
| ! | TGGTTCTACACGAACCGAAT+TGG | - | chr8.3:9891958-9891977 | MS.gene073962:CDS | 45.0% |
| !! | ACCAAGAGTCCAAGAGTATC+TGG | - | chr8.3:9892224-9892243 | MS.gene073962:CDS | 45.0% |
| !! | TCCAAGAGTATCTGGTCCTT+TGG | - | chr8.3:9892232-9892251 | MS.gene073962:CDS | 45.0% |
| CACGAACCGAATTGGTACCA+AGG | - | chr8.3:9891966-9891985 | MS.gene073962:CDS | 50.0% | |
| GCTCATTGCGGGAAAAGATG+AGG | + | chr8.3:9891710-9891729 | None:intergenic | 50.0% | |
| TTCCCGCAATGAGCTTCAGT+TGG | - | chr8.3:9891716-9891735 | MS.gene073962:CDS | 50.0% | |
| ! | TTCGGTTCGTGTAGAACCAC+AGG | + | chr8.3:9891957-9891976 | None:intergenic | 50.0% |
| !! | ATGGAGAGGAGCATTGGTCA+AGG | - | chr8.3:9891995-9892014 | MS.gene073962:CDS | 50.0% |
| !! | CTCCTCTCCATTTTTGCCCT+TGG | + | chr8.3:9891986-9892005 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 9891645 | 9892424 | 9891645 | ID=MS.gene073962 |
| chr8.3 | mRNA | 9891645 | 9892424 | 9891645 | ID=MS.gene073962.t1;Parent=MS.gene073962 |
| chr8.3 | exon | 9891645 | 9892424 | 9891645 | ID=MS.gene073962.t1.exon1;Parent=MS.gene073962.t1 |
| chr8.3 | CDS | 9891645 | 9892424 | 9891645 | ID=cds.MS.gene073962.t1;Parent=MS.gene073962.t1 |
| Gene Sequence |
| Protein sequence |
