Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29361.t1 | XP_003601259.1 | 98.9 | 459 | 3 | 2 | 1 | 458 | 1 | 458 | 7.70E-260 | 906 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29361.t1 | Q8L5Y9 | 84.6 | 435 | 63 | 3 | 28 | 458 | 31 | 465 | 4.6e-213 | 741.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29361.t1 | G7J5F4 | 98.9 | 459 | 3 | 2 | 1 | 458 | 1 | 458 | 5.5e-260 | 906.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049264 | MS.gene29361 | 0.847402 | 1.18E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene29361 | 0.854561 | 1.13E-61 | -1.69E-46 |
| MS.gene049585 | MS.gene29361 | 0.833694 | 4.60E-56 | -1.69E-46 |
| MS.gene04976 | MS.gene29361 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene04984 | MS.gene29361 | 0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene04991 | MS.gene29361 | -0.822437 | 2.37E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene29361 | 0.833536 | 5.04E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene29361 | 0.808766 | 2.64E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene29361 | 0.81936 | 1.21E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene29361 | 0.838675 | 2.50E-57 | -1.69E-46 |
| MS.gene050442 | MS.gene29361 | 0.836748 | 7.80E-57 | -1.69E-46 |
| MS.gene050556 | MS.gene29361 | 0.811903 | 5.55E-51 | -1.69E-46 |
| MS.gene050629 | MS.gene29361 | -0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene29361 | 0.802 | 6.91E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene29361 | 0.875916 | 2.11E-68 | -1.69E-46 |
| MS.gene050763 | MS.gene29361 | 0.873616 | 1.28E-67 | -1.69E-46 |
| MS.gene050807 | MS.gene29361 | 0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene050826 | MS.gene29361 | 0.834356 | 3.14E-56 | -1.69E-46 |
| MS.gene051198 | MS.gene29361 | 0.802022 | 6.83E-49 | -1.69E-46 |
| MS.gene051210 | MS.gene29361 | 0.831981 | 1.23E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene29361 | 0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene051624 | MS.gene29361 | 0.801199 | 1.01E-48 | -1.69E-46 |
| MS.gene051800 | MS.gene29361 | 0.84413 | 9.14E-59 | -1.69E-46 |
| MS.gene05216 | MS.gene29361 | 0.821865 | 3.22E-53 | -1.69E-46 |
| MS.gene052242 | MS.gene29361 | -0.802414 | 5.67E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene29361 | 0.808825 | 2.56E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene29361 | 0.807068 | 6.05E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene29361 | 0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene052675 | MS.gene29361 | 0.827281 | 1.71E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene29361 | 0.836062 | 1.17E-56 | -1.69E-46 |
| MS.gene052994 | MS.gene29361 | 0.826545 | 2.56E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene29361 | 0.80511 | 1.56E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene29361 | 0.873139 | 1.85E-67 | -1.69E-46 |
| MS.gene054467 | MS.gene29361 | 0.816091 | 6.61E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene29361 | 0.837258 | 5.78E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene29361 | 0.828604 | 8.20E-55 | -1.69E-46 |
| MS.gene054826 | MS.gene29361 | 0.841897 | 3.60E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene29361 | 0.827264 | 1.72E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene29361 | 0.805236 | 1.47E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene29361 | 0.827367 | 1.63E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene29361 | 0.823297 | 1.49E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene29361 | 0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene05595 | MS.gene29361 | 0.836177 | 1.09E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene29361 | 0.815425 | 9.31E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene29361 | 0.861464 | 1.01E-63 | -1.69E-46 |
| MS.gene056507 | MS.gene29361 | 0.81235 | 4.43E-51 | -1.69E-46 |
| MS.gene056873 | MS.gene29361 | 0.825873 | 3.70E-54 | -1.69E-46 |
| MS.gene057156 | MS.gene29361 | -0.804717 | 1.89E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene29361 | 0.845083 | 5.07E-59 | -1.69E-46 |
| MS.gene057869 | MS.gene29361 | 0.846674 | 1.87E-59 | -1.69E-46 |
| MS.gene057929 | MS.gene29361 | 0.851045 | 1.15E-60 | -1.69E-46 |
| MS.gene058081 | MS.gene29361 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene058223 | MS.gene29361 | -0.805566 | 1.25E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene29361 | 0.850757 | 1.38E-60 | -1.69E-46 |
| MS.gene058638 | MS.gene29361 | 0.835704 | 1.44E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene29361 | 0.834307 | 3.23E-56 | -1.69E-46 |
| MS.gene058647 | MS.gene29361 | 0.83665 | 8.26E-57 | -1.69E-46 |
| MS.gene05872 | MS.gene29361 | 0.815395 | 9.45E-52 | -1.69E-46 |
| MS.gene058758 | MS.gene29361 | 0.812115 | 4.99E-51 | -1.69E-46 |
| MS.gene059161 | MS.gene29361 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene059438 | MS.gene29361 | 0.805565 | 1.26E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene29361 | 0.846824 | 1.70E-59 | -1.69E-46 |
| MS.gene059440 | MS.gene29361 | 0.809664 | 1.69E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene29361 | 0.835477 | 1.64E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene29361 | 0.811218 | 7.81E-51 | -1.69E-46 |
| MS.gene05973 | MS.gene29361 | 0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene059952 | MS.gene29361 | 0.806595 | 7.62E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene29361 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene060122 | MS.gene29361 | -0.802188 | 6.31E-49 | -1.69E-46 |
| MS.gene060125 | MS.gene29361 | -0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene29361 | 0.821623 | 3.66E-53 | -1.69E-46 |
| MS.gene060373 | MS.gene29361 | 0.845471 | 3.98E-59 | -1.69E-46 |
| MS.gene060380 | MS.gene29361 | 0.842829 | 2.04E-58 | -1.69E-46 |
| MS.gene060400 | MS.gene29361 | 0.839963 | 1.16E-57 | -1.69E-46 |
| MS.gene06052 | MS.gene29361 | 0.858057 | 1.07E-62 | -1.69E-46 |
| MS.gene060637 | MS.gene29361 | 0.815503 | 8.94E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene29361 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene29361 | 0.813471 | 2.52E-51 | -1.69E-46 |
| MS.gene060802 | MS.gene29361 | 0.816231 | 6.15E-52 | -1.69E-46 |
| MS.gene060850 | MS.gene29361 | 0.810206 | 1.29E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene29361 | 0.817107 | 3.91E-52 | -1.69E-46 |
| MS.gene060852 | MS.gene29361 | 0.815753 | 7.87E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene29361 | 0.812706 | 3.70E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene29361 | 0.852339 | 4.93E-61 | -1.69E-46 |
| MS.gene06121 | MS.gene29361 | 0.806833 | 6.79E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29361.t1 | MTR_3g077740 | 98.911 | 459 | 3 | 2 | 1 | 458 | 1 | 458 | 0.0 | 931 |
| MS.gene29361.t1 | MTR_8g064850 | 61.463 | 410 | 148 | 3 | 45 | 453 | 1 | 401 | 1.01e-177 | 505 |
| MS.gene29361.t1 | MTR_8g064850 | 62.751 | 349 | 120 | 3 | 45 | 392 | 1 | 340 | 7.57e-154 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29361.t1 | AT4G32180 | 84.598 | 435 | 63 | 3 | 28 | 458 | 31 | 465 | 0.0 | 756 |
| MS.gene29361.t1 | AT4G32180 | 84.598 | 435 | 63 | 3 | 28 | 458 | 31 | 465 | 0.0 | 756 |
| MS.gene29361.t1 | AT4G32180 | 84.598 | 435 | 63 | 3 | 28 | 458 | 31 | 465 | 0.0 | 755 |
| MS.gene29361.t1 | AT1G60440 | 61.042 | 403 | 133 | 6 | 66 | 466 | 3 | 383 | 3.76e-151 | 436 |
| MS.gene29361.t1 | AT1G60440 | 68.874 | 302 | 92 | 2 | 166 | 466 | 6 | 306 | 8.77e-133 | 387 |
| MS.gene29361.t1 | AT1G60440 | 54.229 | 402 | 123 | 6 | 66 | 466 | 3 | 344 | 1.01e-123 | 365 |
Find 114 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTGAACAAACTCTTTC+TGG | 0.085671 | 3.2:-68711367 | None:intergenic |
| TAGCTCTATTATCTCCTTTC+TGG | 0.143633 | 3.2:-68711757 | None:intergenic |
| TTTGCGACATGAAGGATTTC+TGG | 0.197061 | 3.2:+68712602 | MS.gene29361:CDS |
| TCCACTATTGCTTCAAGTTT+TGG | 0.201193 | 3.2:+68712002 | MS.gene29361:CDS |
| GAAGGATTTCTGGGAGCTTT+AGG | 0.237803 | 3.2:+68712612 | MS.gene29361:CDS |
| GATAAGGGAACAAATCATTT+TGG | 0.246674 | 3.2:-68711391 | None:intergenic |
| TCTCATCTCGCTCTTGATAT+TGG | 0.262842 | 3.2:+68708957 | MS.gene29361:CDS |
| GATTACCTGCTCAAGATAAT+TGG | 0.265189 | 3.2:+68712804 | MS.gene29361:CDS |
| AGGAGAAGCTTTCCTATTCT+TGG | 0.278927 | 3.2:+68709966 | MS.gene29361:CDS |
| TGGTGGTTTGGATTATTCTA+AGG | 0.289539 | 3.2:+68711805 | MS.gene29361:CDS |
| ACTCAAAGTTACCTTAATTA+TGG | 0.294989 | 3.2:-68710267 | None:intergenic |
| ATGTTGGTGGTGGTACTTAT+TGG | 0.301273 | 3.2:+68711594 | MS.gene29361:CDS |
| ATGCTTGTTGGGGACATTTA+TGG | 0.301696 | 3.2:+68711785 | MS.gene29361:CDS |
| TGTTGGTGGTGGTACTTATT+GGG | 0.303285 | 3.2:+68711595 | MS.gene29361:CDS |
| GCCAATCAGACGATGATAAA+AGG | 0.305514 | 3.2:+68709901 | MS.gene29361:CDS |
| TGTATCTTGCCACCAGTATA+TGG | 0.319902 | 3.2:-68712714 | None:intergenic |
| TGGGGACATTTATGGTGGTT+TGG | 0.324370 | 3.2:+68711793 | MS.gene29361:CDS |
| TTTCATTTGCTGTTCAATAC+TGG | 0.329419 | 3.2:+68712452 | MS.gene29361:CDS |
| GGGAAGTTTGAGAGGGTTAG+TGG | 0.335778 | 3.2:+68711566 | MS.gene29361:CDS |
| TGATCGAAATGCCATAATTA+AGG | 0.338567 | 3.2:+68710256 | MS.gene29361:CDS |
| CTTCTAGTTAATGTTGGTTC+CGG | 0.339897 | 3.2:+68711413 | MS.gene29361:CDS |
| AGGAGCAAATTTCTTGCTTA+AGG | 0.343687 | 3.2:+68710757 | MS.gene29361:CDS |
| CACTTTGTCAAATTTGAAAC+GGG | 0.349017 | 3.2:+68709999 | MS.gene29361:CDS |
| AAACATTGAAGGAGCGATTA+GGG | 0.351661 | 3.2:+68709928 | MS.gene29361:CDS |
| TAGGGCTTTCTAATGGTAAC+AGG | 0.355069 | 3.2:+68709946 | MS.gene29361:CDS |
| AGAGAGAGTGATATGTCTTC+AGG | 0.373424 | 3.2:-68712065 | None:intergenic |
| AAAACATTGAAGGAGCGATT+AGG | 0.380222 | 3.2:+68709927 | MS.gene29361:CDS |
| GAGCTATCGACATGCTTGTT+GGG | 0.380873 | 3.2:+68711774 | MS.gene29361:CDS |
| CACCAAGTCTTTCTTTGAAA+AGG | 0.381637 | 3.2:-68710694 | None:intergenic |
| GGATGTTCTTGTTCTTTAGT+TGG | 0.387392 | 3.2:+68712825 | MS.gene29361:CDS |
| GAACAACAACAACAAGTTCT+TGG | 0.391161 | 3.2:+68708762 | MS.gene29361:CDS |
| TGGTGGTACTTATTGGGGAC+TGG | 0.395806 | 3.2:+68711601 | MS.gene29361:CDS |
| CCGATGGGTGCTCCATATAC+TGG | 0.398412 | 3.2:+68712702 | MS.gene29361:CDS |
| CCATGTGTGTGAAAGCTTCA+TGG | 0.404252 | 3.2:-68711340 | None:intergenic |
| TTTATTTGTCATAGGTTGAT+GGG | 0.404451 | 3.2:+68711540 | MS.gene29361:intron |
| TCCAAAACTTGAAGCAATAG+TGG | 0.413680 | 3.2:-68712003 | None:intergenic |
| AATTATCTTGAGCAGGTAAT+CGG | 0.417351 | 3.2:-68712802 | None:intergenic |
| CTTGAACTGGATCTATGTAT+TGG | 0.418629 | 3.2:-68708843 | None:intergenic |
| CCAACATTAACTAGAAGATA+AGG | 0.421746 | 3.2:-68711407 | None:intergenic |
| TTGTCATAGGTTGATGGGGA+TGG | 0.422373 | 3.2:+68711545 | MS.gene29361:intron |
| CATCGCCTGGGCTTCTCCAT+TGG | 0.428278 | 3.2:-68712577 | None:intergenic |
| TTGCGACATGAAGGATTTCT+GGG | 0.430140 | 3.2:+68712603 | MS.gene29361:CDS |
| CCTTATCTTCTAGTTAATGT+TGG | 0.434063 | 3.2:+68711407 | MS.gene29361:CDS |
| TGTCATAGGTTGATGGGGAT+GGG | 0.443864 | 3.2:+68711546 | MS.gene29361:intron |
| TCACTTTGTCAAATTTGAAA+CGG | 0.458203 | 3.2:+68709998 | MS.gene29361:CDS |
| ATCAAGTTGAGGCCTTGAAC+TGG | 0.458404 | 3.2:-68708856 | None:intergenic |
| AAGCAATAGTGGAAGCTGAT+AGG | 0.466489 | 3.2:-68711992 | None:intergenic |
| GAGCGATTAGGGCTTTCTAA+TGG | 0.468080 | 3.2:+68709939 | MS.gene29361:CDS |
| GCCTGTAGGAGCCATGTTGT+TGG | 0.477390 | 3.2:-68708817 | None:intergenic |
| TGAAGCCTTCCACCAAGAAT+AGG | 0.477732 | 3.2:-68709978 | None:intergenic |
| GGTGGTACTTATTGGGGACT+GGG | 0.480437 | 3.2:+68711602 | MS.gene29361:CDS |
| AGATTGATTAGGCAACAAAA+TGG | 0.482598 | 3.2:-68708925 | None:intergenic |
| TTGCTTGAGCTGAGCCAGAA+AGG | 0.495131 | 3.2:+68711743 | MS.gene29361:CDS |
| AGAGCTATCGACATGCTTGT+TGG | 0.498893 | 3.2:+68711773 | MS.gene29361:CDS |
| AGGGTTAGTGGGACAAATGT+TGG | 0.499572 | 3.2:+68711578 | MS.gene29361:CDS |
| CAACATTAACTAGAAGATAA+GGG | 0.500111 | 3.2:-68711406 | None:intergenic |
| AACATCCAATTATCTTGAGC+AGG | 0.503521 | 3.2:-68712809 | None:intergenic |
| ATGGGGATGGGAAGTTTGAG+AGG | 0.506268 | 3.2:+68711558 | MS.gene29361:CDS |
| CAATACATAGATCCAGTTCA+AGG | 0.514523 | 3.2:+68708844 | MS.gene29361:CDS |
| CATCTCGCTCTTGATATTGG+AGG | 0.522421 | 3.2:+68708960 | MS.gene29361:CDS |
| TTCCGGTGTTAGTATGATCA+AGG | 0.525075 | 3.2:+68711430 | MS.gene29361:CDS |
| ACCAACAACATGGCTCCTAC+AGG | 0.525280 | 3.2:+68708816 | MS.gene29361:CDS |
| ACATATCACTCTCTCTTCTA+CGG | 0.529289 | 3.2:+68712072 | MS.gene29361:CDS |
| CCATGAAGCTTTCACACACA+TGG | 0.530882 | 3.2:+68711340 | MS.gene29361:CDS |
| AAGTCTTTCTTTGAAAAGGT+CGG | 0.531063 | 3.2:-68710690 | None:intergenic |
| GTTAGTTGAAAGGTTTCCGA+TGG | 0.532451 | 3.2:+68712686 | MS.gene29361:CDS |
| TAAAAGGAAGAAAACATTGA+AGG | 0.533223 | 3.2:+68709917 | MS.gene29361:CDS |
| AGCAAATGAAAGAGTGTCCA+TGG | 0.533459 | 3.2:-68712440 | None:intergenic |
| AAGATACATGGCCCACCACT+TGG | 0.534164 | 3.2:+68712729 | MS.gene29361:CDS |
| GCTTTCCTATTCTTGGTGGA+AGG | 0.535678 | 3.2:+68709973 | MS.gene29361:CDS |
| TATACTGGTGGCAAGATACA+TGG | 0.537423 | 3.2:+68712717 | MS.gene29361:CDS |
| GTGATGAAGGCTACTGGAGG+TGG | 0.539097 | 3.2:+68710653 | MS.gene29361:intron |
| TGGTGCATCAGTTAGTTGAA+AGG | 0.545222 | 3.2:+68712676 | MS.gene29361:CDS |
| TTATTTGTCATAGGTTGATG+GGG | 0.552120 | 3.2:+68711541 | MS.gene29361:intron |
| AGAAGCTTTCCTATTCTTGG+TGG | 0.558179 | 3.2:+68709969 | MS.gene29361:CDS |
| GGAAGTTTGAGAGGGTTAGT+GGG | 0.558531 | 3.2:+68711567 | MS.gene29361:CDS |
| GGCAGGATCTCTGATAAAGT+TGG | 0.559378 | 3.2:+68709857 | MS.gene29361:intron |
| TCATTCAAATCGCCAAGTGG+TGG | 0.560907 | 3.2:-68712741 | None:intergenic |
| TAGGTCCAATGGAGAAGCCC+AGG | 0.563858 | 3.2:+68712572 | MS.gene29361:intron |
| GATTTCATACAACATCGGTC+AGG | 0.567822 | 3.2:+68712097 | MS.gene29361:CDS |
| TGATTAGGCAACAAAATGGT+GGG | 0.574093 | 3.2:-68708921 | None:intergenic |
| GACAAATCATCAGATTGATT+AGG | 0.574243 | 3.2:-68708936 | None:intergenic |
| CACCTTGATCATACTAACAC+CGG | 0.575151 | 3.2:-68711432 | None:intergenic |
| CAGGGGTCATGCTTATACCA+TGG | 0.575740 | 3.2:+68712423 | MS.gene29361:CDS |
| TTGATTAGGCAACAAAATGG+TGG | 0.577087 | 3.2:-68708922 | None:intergenic |
| CTATGTATTGGATTGCCTGT+AGG | 0.578163 | 3.2:-68708831 | None:intergenic |
| CATTCAAATCGCCAAGTGGT+GGG | 0.589143 | 3.2:-68712740 | None:intergenic |
| ACTTGGCGATTTGAATGAGA+AGG | 0.589246 | 3.2:+68712746 | MS.gene29361:CDS |
| CTTGGTATTGACGAATCTGA+AGG | 0.589757 | 3.2:+68708780 | MS.gene29361:CDS |
| GACTGTTAACAAAGTGCAAG+AGG | 0.589787 | 3.2:+68711627 | MS.gene29361:CDS |
| CTTGTTGGGGACATTTATGG+TGG | 0.594785 | 3.2:+68711788 | MS.gene29361:CDS |
| CAACAACAACACCAACAACA+TGG | 0.594798 | 3.2:+68708806 | MS.gene29361:CDS |
| GAAATGAATTGTCTTGTGGC+AGG | 0.597674 | 3.2:+68710737 | MS.gene29361:CDS |
| GTTGGTGGTGGTACTTATTG+GGG | 0.602827 | 3.2:+68711596 | MS.gene29361:CDS |
| GCATGGTTTAGATGACCTCA+TGG | 0.603918 | 3.2:+68712656 | MS.gene29361:CDS |
| TGGGGATGGGAAGTTTGAGA+GGG | 0.604314 | 3.2:+68711559 | MS.gene29361:CDS |
| AGTGGGACAAATGTTGGTGG+TGG | 0.605265 | 3.2:+68711584 | MS.gene29361:CDS |
| TGAAATTCAATCTAATGTTG+AGG | 0.610246 | 3.2:+68708890 | MS.gene29361:CDS |
| AGCTATCGACATGCTTGTTG+GGG | 0.611783 | 3.2:+68711775 | MS.gene29361:CDS |
| GTTAGTGGGACAAATGTTGG+TGG | 0.614321 | 3.2:+68711581 | MS.gene29361:CDS |
| TTAGTTGAAAGGTTTCCGAT+GGG | 0.620541 | 3.2:+68712687 | MS.gene29361:CDS |
| ATGGGTGCTCCATATACTGG+TGG | 0.639105 | 3.2:+68712705 | MS.gene29361:CDS |
| CCAGTATATGGAGCACCCAT+CGG | 0.641614 | 3.2:-68712702 | None:intergenic |
| TTTATGAGTTACGAAAAGCA+TGG | 0.645096 | 3.2:+68712639 | MS.gene29361:CDS |
| GCTTTGCTAACATCAAGTTG+AGG | 0.645930 | 3.2:-68708867 | None:intergenic |
| GAAGCTTTCACACACATGGA+GGG | 0.648007 | 3.2:+68711344 | MS.gene29361:CDS |
| AGATGAAATGAATTGTCTTG+TGG | 0.660802 | 3.2:+68710733 | MS.gene29361:CDS |
| CGGATGATTTCATACAACAT+CGG | 0.672578 | 3.2:+68712092 | MS.gene29361:CDS |
| TGAAGCTTTCACACACATGG+AGG | 0.674064 | 3.2:+68711343 | MS.gene29361:CDS |
| TTCTCATTCAAATCGCCAAG+TGG | 0.675820 | 3.2:-68712744 | None:intergenic |
| GTCACGTTACTCAGATACTG+AGG | 0.699781 | 3.2:+68710232 | MS.gene29361:CDS |
| CAACTAACTGATGCACCATG+AGG | 0.704343 | 3.2:-68712671 | None:intergenic |
| TTTGTGATGAAGGCTACTGG+AGG | 0.733686 | 3.2:+68710650 | MS.gene29361:intron |
| CATTCAAAGCAGCTTCACCG+TGG | 0.733695 | 3.2:+68710050 | MS.gene29361:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTCCAAATTAATA+TGG | + | chr3.2:68711886-68711905 | MS.gene29361:intron | 10.0% |
| !!! | ACTTATATAATTTTTTGTTT+AGG | + | chr3.2:68712553-68712572 | MS.gene29361:intron | 10.0% |
| !! | AAAAACTATATCAGAAAAAA+AGG | + | chr3.2:68712025-68712044 | MS.gene29361:CDS | 15.0% |
| !! | AGCTTAAAATTTAAATATGT+AGG | + | chr3.2:68711047-68711066 | MS.gene29361:intron | 15.0% |
| !! | ATAAAAGATGTCAAAAATAA+GGG | - | chr3.2:68709655-68709674 | None:intergenic | 15.0% |
| !! | ATTTCACATATTATATTTCT+AGG | - | chr3.2:68709312-68709331 | None:intergenic | 15.0% |
| !! | GAAAATCCAAAAAAAATAAA+AGG | - | chr3.2:68709718-68709737 | None:intergenic | 15.0% |
| !! | TTTAAATAATAGATTAGATG+AGG | - | chr3.2:68712188-68712207 | None:intergenic | 15.0% |
| !!! | ATTTGACCTTTTATTTTTTT+TGG | + | chr3.2:68709709-68709728 | MS.gene29361:intron | 15.0% |
| !!! | TATTTTTTTATCAATCAACA+TGG | + | chr3.2:68711933-68711952 | MS.gene29361:intron | 15.0% |
| !!! | TCAATGTAGTATTTTAATTT+AGG | - | chr3.2:68712527-68712546 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTTGGATTTTCA+CGG | + | chr3.2:68709719-68709738 | MS.gene29361:intron | 15.0% |
| !!! | TTGTTTTATGATAATAGTAA+AGG | - | chr3.2:68711181-68711200 | None:intergenic | 15.0% |
| !!! | TTTCACATATTATATTTCTA+GGG | - | chr3.2:68709311-68709330 | None:intergenic | 15.0% |
| !! | CAAAATGACAAAATACATAA+CGG | - | chr3.2:68709101-68709120 | None:intergenic | 20.0% |
| !! | CAAATAACAAATGAAATGAA+CGG | - | chr3.2:68710509-68710528 | None:intergenic | 20.0% |
| !! | CATAAAAGATGTCAAAAATA+AGG | - | chr3.2:68709656-68709675 | None:intergenic | 20.0% |
| !! | CGAAAATGATAATTAATAAC+AGG | - | chr3.2:68710789-68710808 | None:intergenic | 20.0% |
| !! | GCTTATATTTATGAACTAAA+TGG | - | chr3.2:68712146-68712165 | None:intergenic | 20.0% |
| !! | TGATACATTAATAGTAAAGT+TGG | - | chr3.2:68709360-68709379 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGAGAATATTTTT+TGG | + | chr3.2:68712388-68712407 | MS.gene29361:CDS | 20.0% |
| !!! | ATTTAATTTTTAAGAGAGCA+AGG | + | chr3.2:68709784-68709803 | MS.gene29361:intron | 20.0% |
| !!! | CTTATTTTTGACATCTTTTA+TGG | + | chr3.2:68709654-68709673 | MS.gene29361:intron | 20.0% |
| !!! | TTATTTTTTTTTCCCTTGTA+AGG | + | chr3.2:68710963-68710982 | MS.gene29361:intron | 20.0% |
| !!! | TTCACATATTATATTTCTAG+GGG | - | chr3.2:68709310-68709329 | None:intergenic | 20.0% |
| !!! | TTTTTTATGTCATTCTCTTA+CGG | + | chr3.2:68709618-68709637 | MS.gene29361:intron | 20.0% |
| ! | AAATATGTGAAATGTAAACC+AGG | + | chr3.2:68709177-68709196 | MS.gene29361:intron | 25.0% |
| ! | AATATGTGAAATGTAAACCA+GGG | + | chr3.2:68709178-68709197 | MS.gene29361:intron | 25.0% |
| ! | ACATGGTGAATTTATGATTA+TGG | + | chr3.2:68710182-68710201 | MS.gene29361:intron | 25.0% |
| ! | ACTCAAAGTTACCTTAATTA+TGG | - | chr3.2:68710270-68710289 | None:intergenic | 25.0% |
| ! | ATTACTCATCTCAATAAGTA+AGG | - | chr3.2:68710877-68710896 | None:intergenic | 25.0% |
| ! | CAACATTAACTAGAAGATAA+GGG | - | chr3.2:68711409-68711428 | None:intergenic | 25.0% |
| ! | CTATGTTTAAACTATTGACA+AGG | + | chr3.2:68711687-68711706 | MS.gene29361:intron | 25.0% |
| ! | GATCTTATTGAAAACTACAT+CGG | + | chr3.2:68711154-68711173 | MS.gene29361:intron | 25.0% |
| ! | GGTCTTAAATAATTCTAGAT+TGG | + | chr3.2:68711969-68711988 | MS.gene29361:intron | 25.0% |
| ! | TAAAAGGAAGAAAACATTGA+AGG | + | chr3.2:68709917-68709936 | MS.gene29361:CDS | 25.0% |
| ! | TCACTTTGTCAAATTTGAAA+CGG | + | chr3.2:68709998-68710017 | MS.gene29361:CDS | 25.0% |
| ! | TCATCTACTCCATATTAATT+TGG | - | chr3.2:68711898-68711917 | None:intergenic | 25.0% |
| ! | TGAAATTCAATCTAATGTTG+AGG | + | chr3.2:68708890-68708909 | MS.gene29361:CDS | 25.0% |
| ! | TTATTGCTCTTGTAATGTAA+TGG | + | chr3.2:68709025-68709044 | MS.gene29361:intron | 25.0% |
| !! | ATCAAAAGTGTAATGAAGTT+AGG | - | chr3.2:68711472-68711491 | None:intergenic | 25.0% |
| !! | GAATTTTTCTCTTGCTTATA+GGG | + | chr3.2:68710204-68710223 | MS.gene29361:intron | 25.0% |
| !! | GATGTATTGTTTCTTTGAAT+AGG | + | chr3.2:68710842-68710861 | MS.gene29361:intron | 25.0% |
| !! | GTGTTTTTCTTTCCTTTTTT+AGG | + | chr3.2:68709123-68709142 | MS.gene29361:intron | 25.0% |
| !! | TAGTAAAGTTGGTTAAAAGA+TGG | - | chr3.2:68709349-68709368 | None:intergenic | 25.0% |
| !! | TGTAGTTTTCAATAAGATCT+TGG | - | chr3.2:68711153-68711172 | None:intergenic | 25.0% |
| !!! | AATTTTTTGTTTAGGTCCAA+TGG | + | chr3.2:68712561-68712580 | MS.gene29361:intron | 25.0% |
| !!! | ACTTGATTTGTTTCTTCATA+TGG | + | chr3.2:68709835-68709854 | MS.gene29361:intron | 25.0% |
| !!! | ATATTATATTTCTAGGGGAA+AGG | - | chr3.2:68709305-68709324 | None:intergenic | 25.0% |
| !!! | ATTGGTTTTTAATAACGAGA+GGG | - | chr3.2:68710473-68710492 | None:intergenic | 25.0% |
| !!! | CTTGATTTGTTTCTTCATAT+GGG | + | chr3.2:68709836-68709855 | MS.gene29361:intron | 25.0% |
| !!! | GCTTTCTTTTTATTTGTCAT+AGG | + | chr3.2:68711532-68711551 | MS.gene29361:intron | 25.0% |
| !!! | GTACTGTTGTTTTAAAAGAT+TGG | + | chr3.2:68709505-68709524 | MS.gene29361:intron | 25.0% |
| !!! | TGTCATTTAGTTTGGAATTT+GGG | + | chr3.2:68711203-68711222 | MS.gene29361:intron | 25.0% |
| !!! | TTGAAGAGAATATTTTTTGG+AGG | + | chr3.2:68712391-68712410 | MS.gene29361:CDS | 25.0% |
| !!! | TTTATTTGTCATAGGTTGAT+GGG | + | chr3.2:68711540-68711559 | MS.gene29361:intron | 25.0% |
| !!! | TTTTATTTGTCATAGGTTGA+TGG | + | chr3.2:68711539-68711558 | MS.gene29361:intron | 25.0% |
| !!! | TTTTCTTTCCTTTTTTAGGT+GGG | + | chr3.2:68709127-68709146 | MS.gene29361:intron | 25.0% |
| !!! | TTTTGGAGGATTTTTTATCA+GGG | + | chr3.2:68712405-68712424 | MS.gene29361:CDS | 25.0% |
| !!! | TTTTTCTTTCCTTTTTTAGG+TGG | + | chr3.2:68709126-68709145 | MS.gene29361:intron | 25.0% |
| !!! | TTTTTGGAGGATTTTTTATC+AGG | + | chr3.2:68712404-68712423 | MS.gene29361:CDS | 25.0% |
| AAATGCTCTTTACCTTACAA+GGG | - | chr3.2:68710978-68710997 | None:intergenic | 30.0% | |
| AAATGTCCATCATATAGAGA+AGG | + | chr3.2:68711860-68711879 | MS.gene29361:intron | 30.0% | |
| AATGTATGACAAAAGCTAAC+AGG | + | chr3.2:68711502-68711521 | MS.gene29361:intron | 30.0% | |
| AATGTCCATCATATAGAGAA+GGG | + | chr3.2:68711861-68711880 | MS.gene29361:intron | 30.0% | |
| AATTATCTTGAGCAGGTAAT+CGG | - | chr3.2:68712805-68712824 | None:intergenic | 30.0% | |
| ACTACCTTATGTTAACACTT+TGG | + | chr3.2:68711013-68711032 | MS.gene29361:intron | 30.0% | |
| AGAAGAAAACTATAGAAGAC+AGG | - | chr3.2:68711269-68711288 | None:intergenic | 30.0% | |
| AGATGAAATGAATTGTCTTG+TGG | + | chr3.2:68710733-68710752 | MS.gene29361:CDS | 30.0% | |
| AGATTGATTAGGCAACAAAA+TGG | - | chr3.2:68708928-68708947 | None:intergenic | 30.0% | |
| ATATGACTCAAAAAGAAGCA+AGG | - | chr3.2:68710944-68710963 | None:intergenic | 30.0% | |
| ATATGTGAAATGTAAACCAG+GGG | + | chr3.2:68709179-68709198 | MS.gene29361:intron | 30.0% | |
| ATCCAAGTACATGTGTTAAA+AGG | + | chr3.2:68712285-68712304 | MS.gene29361:intron | 30.0% | |
| CAATTTGAACAAACTCTTTC+TGG | - | chr3.2:68711370-68711389 | None:intergenic | 30.0% | |
| CCAACATTAACTAGAAGATA+AGG | - | chr3.2:68711410-68711429 | None:intergenic | 30.0% | |
| GAAGAAACAAATCAAGTTTC+AGG | - | chr3.2:68709832-68709851 | None:intergenic | 30.0% | |
| GACAAATCATCAGATTGATT+AGG | - | chr3.2:68708939-68708958 | None:intergenic | 30.0% | |
| TGATAAGTAGCAAAAGCTTA+CGG | - | chr3.2:68710406-68710425 | None:intergenic | 30.0% | |
| TGATCGAAATGCCATAATTA+AGG | + | chr3.2:68710256-68710275 | MS.gene29361:CDS | 30.0% | |
| TTGTTTAAGTCAGCTTGATA+GGG | + | chr3.2:68710817-68710836 | MS.gene29361:intron | 30.0% | |
| TTTATGAGTTACGAAAAGCA+TGG | + | chr3.2:68712639-68712658 | MS.gene29361:CDS | 30.0% | |
| TTTGTTTAAGTCAGCTTGAT+AGG | + | chr3.2:68710816-68710835 | MS.gene29361:intron | 30.0% | |
| ! | AAACAAGCTGTCATTTAGTT+TGG | + | chr3.2:68711195-68711214 | MS.gene29361:intron | 30.0% |
| ! | AAGTCTTTCTTTGAAAAGGT+CGG | - | chr3.2:68710693-68710712 | None:intergenic | 30.0% |
| ! | AAGTTCTAACACTTCTTAGT+AGG | + | chr3.2:68711310-68711329 | MS.gene29361:intron | 30.0% |
| ! | AGCTGACTTAAACAAAATGT+AGG | - | chr3.2:68710812-68710831 | None:intergenic | 30.0% |
| ! | ATGCATTCATTTTGTGATGA+AGG | + | chr3.2:68710640-68710659 | MS.gene29361:intron | 30.0% |
| ! | CACTTTGTCAAATTTGAAAC+GGG | + | chr3.2:68709999-68710018 | MS.gene29361:CDS | 30.0% |
| ! | CATTACACTTTTGATCTCTT+TGG | + | chr3.2:68711477-68711496 | MS.gene29361:intron | 30.0% |
| ! | CCTTATCTTCTAGTTAATGT+TGG | + | chr3.2:68711407-68711426 | MS.gene29361:CDS | 30.0% |
| ! | CTCTACTGTATTTTTCTGTT+TGG | + | chr3.2:68710323-68710342 | MS.gene29361:intron | 30.0% |
| ! | GATAAGGGAACAAATCATTT+TGG | - | chr3.2:68711394-68711413 | None:intergenic | 30.0% |
| ! | GGAATTTTTCTCTTGCTTAT+AGG | + | chr3.2:68710203-68710222 | MS.gene29361:intron | 30.0% |
| ! | TAAAGTTGGTTAAAAGATGG+CGG | - | chr3.2:68709346-68709365 | None:intergenic | 30.0% |
| ! | TGAACCAAAGTGTTAACATA+AGG | - | chr3.2:68711020-68711039 | None:intergenic | 30.0% |
| ! | TGTAATGTAATGGTCTCTTT+TGG | + | chr3.2:68709035-68709054 | MS.gene29361:intron | 30.0% |
| ! | TTCCTTTTAACACATGTACT+TGG | - | chr3.2:68712290-68712309 | None:intergenic | 30.0% |
| ! | TTTTTCCCTTCTCTATATGA+TGG | - | chr3.2:68711869-68711888 | None:intergenic | 30.0% |
| !! | CTGTCATTTAGTTTGGAATT+TGG | + | chr3.2:68711202-68711221 | MS.gene29361:intron | 30.0% |
| !! | CTTCTTAGCTTTTCATGTTT+GGG | + | chr3.2:68711119-68711138 | MS.gene29361:intron | 30.0% |
| !! | TAAGGTAAAGAGCATTTGTT+TGG | + | chr3.2:68710981-68711000 | MS.gene29361:intron | 30.0% |
| !! | TTATTTGTCATAGGTTGATG+GGG | + | chr3.2:68711541-68711560 | MS.gene29361:intron | 30.0% |
| !! | TTCTTAGCTTTTCATGTTTG+GGG | + | chr3.2:68711120-68711139 | MS.gene29361:intron | 30.0% |
| !! | TTTCATTTGCTGTTCAATAC+TGG | + | chr3.2:68712452-68712471 | MS.gene29361:CDS | 30.0% |
| !! | TTTTAAAAGATTGGTCAAGC+CGG | + | chr3.2:68709514-68709533 | MS.gene29361:intron | 30.0% |
| !!! | CATTGGTTTTTAATAACGAG+AGG | - | chr3.2:68710474-68710493 | None:intergenic | 30.0% |
| !!! | GTTTTAGAATGCTGTCAAAA+TGG | + | chr3.2:68710558-68710577 | MS.gene29361:intron | 30.0% |
| !!! | TTTCTTTCCTTTTTTAGGTG+GGG | + | chr3.2:68709128-68709147 | MS.gene29361:intron | 30.0% |
| !!! | TTTGGAGGATTTTTTATCAG+GGG | + | chr3.2:68712406-68712425 | MS.gene29361:CDS | 30.0% |
| AAAACATTGAAGGAGCGATT+AGG | + | chr3.2:68709927-68709946 | MS.gene29361:CDS | 35.0% | |
| AAACATTGAAGGAGCGATTA+GGG | + | chr3.2:68709928-68709947 | MS.gene29361:CDS | 35.0% | |
| AACAGTACGTAATCATTTGC+GGG | - | chr3.2:68709493-68709512 | None:intergenic | 35.0% | |
| AACATCCAATTATCTTGAGC+AGG | - | chr3.2:68712812-68712831 | None:intergenic | 35.0% | |
| AACGGAAAAATCATCGACAT+TGG | - | chr3.2:68710491-68710510 | None:intergenic | 35.0% | |
| ACATATCACTCTCTCTTCTA+CGG | + | chr3.2:68712072-68712091 | MS.gene29361:CDS | 35.0% | |
| ACTGGTACATAAAATGCCTA+AGG | + | chr3.2:68712470-68712489 | MS.gene29361:intron | 35.0% | |
| AGAATCTCTTACGCTGAAAA+AGG | - | chr3.2:68709582-68709601 | None:intergenic | 35.0% | |
| AGCAAATTTCTTGCTTAAGG+TGG | + | chr3.2:68710760-68710779 | MS.gene29361:intron | 35.0% | |
| AGGAGCAAATTTCTTGCTTA+AGG | + | chr3.2:68710757-68710776 | MS.gene29361:CDS | 35.0% | |
| CAAATGCTCTTTACCTTACA+AGG | - | chr3.2:68710979-68710998 | None:intergenic | 35.0% | |
| CAACAGTACGTAATCATTTG+CGG | - | chr3.2:68709494-68709513 | None:intergenic | 35.0% | |
| CAATACATAGATCCAGTTCA+AGG | + | chr3.2:68708844-68708863 | MS.gene29361:CDS | 35.0% | |
| CCAAACATGAAAAGCTAAGA+AGG | - | chr3.2:68711121-68711140 | None:intergenic | 35.0% | |
| CGGATGATTTCATACAACAT+CGG | + | chr3.2:68712092-68712111 | MS.gene29361:CDS | 35.0% | |
| CTGGTACATAAAATGCCTAA+GGG | + | chr3.2:68712471-68712490 | MS.gene29361:intron | 35.0% | |
| CTTGAACTGGATCTATGTAT+TGG | - | chr3.2:68708846-68708865 | None:intergenic | 35.0% | |
| GAACAACAACAACAAGTTCT+TGG | + | chr3.2:68708762-68708781 | MS.gene29361:CDS | 35.0% | |
| GATTACCTGCTCAAGATAAT+TGG | + | chr3.2:68712804-68712823 | MS.gene29361:CDS | 35.0% | |
| GGATGTTCTTGTTCTTTAGT+TGG | + | chr3.2:68712825-68712844 | MS.gene29361:CDS | 35.0% | |
| GGTCAATAATTGTTCCCATT+GGG | - | chr3.2:68709250-68709269 | None:intergenic | 35.0% | |
| TCCAAAACTTGAAGCAATAG+TGG | - | chr3.2:68712006-68712025 | None:intergenic | 35.0% | |
| TGATTAGGCAACAAAATGGT+GGG | - | chr3.2:68708924-68708943 | None:intergenic | 35.0% | |
| TGGTCAATAATTGTTCCCAT+TGG | - | chr3.2:68709251-68709270 | None:intergenic | 35.0% | |
| TTACGCTGAAAAAGGAAAGT+TGG | - | chr3.2:68709574-68709593 | None:intergenic | 35.0% | |
| TTAGTTGAAAGGTTTCCGAT+GGG | + | chr3.2:68712687-68712706 | MS.gene29361:CDS | 35.0% | |
| TTGATTAGGCAACAAAATGG+TGG | - | chr3.2:68708925-68708944 | None:intergenic | 35.0% | |
| TTTAGCACATTAGCACAACA+TGG | + | chr3.2:68710165-68710184 | MS.gene29361:intron | 35.0% | |
| ! | ATGAGGCAGAATAACAGTTT+TGG | - | chr3.2:68712171-68712190 | None:intergenic | 35.0% |
| ! | ATTTGTTTCTTCATATGGGC+AGG | + | chr3.2:68709840-68709859 | MS.gene29361:intron | 35.0% |
| ! | CACCAAGTCTTTCTTTGAAA+AGG | - | chr3.2:68710697-68710716 | None:intergenic | 35.0% |
| ! | GACCTTTTCAAAGAAAGACT+TGG | + | chr3.2:68710692-68710711 | MS.gene29361:CDS | 35.0% |
| ! | TAGCTCTATTATCTCCTTTC+TGG | - | chr3.2:68711760-68711779 | None:intergenic | 35.0% |
| ! | TCCTTTTATCATCGTCTGAT+TGG | - | chr3.2:68709905-68709924 | None:intergenic | 35.0% |
| ! | TGATCAAGGTGCATTTTTCT+TGG | + | chr3.2:68711444-68711463 | MS.gene29361:intron | 35.0% |
| ! | TGGTGGTTTGGATTATTCTA+AGG | + | chr3.2:68711805-68711824 | MS.gene29361:CDS | 35.0% |
| ! | TTTTCTCTTGCTTATAGGGT+TGG | + | chr3.2:68710208-68710227 | MS.gene29361:intron | 35.0% |
| !! | CCTTCTTAGCTTTTCATGTT+TGG | + | chr3.2:68711118-68711137 | MS.gene29361:intron | 35.0% |
| !! | CTTCTAGTTAATGTTGGTTC+CGG | + | chr3.2:68711413-68711432 | MS.gene29361:CDS | 35.0% |
| !! | TCCACTATTGCTTCAAGTTT+TGG | + | chr3.2:68712002-68712021 | MS.gene29361:CDS | 35.0% |
| !!! | TTCTTTCCTTTTTTAGGTGG+GGG | + | chr3.2:68709129-68709148 | MS.gene29361:intron | 35.0% |
| !!! | TTTGAGTCTGTCTGCTTTTT+TGG | + | chr3.2:68710283-68710302 | MS.gene29361:intron | 35.0% |
| ACAGCAAAAGACAACATGAC+AGG | - | chr3.2:68709408-68709427 | None:intergenic | 40.0% | |
| ACTCGAGTTTGATTCCCAAT+GGG | + | chr3.2:68709233-68709252 | MS.gene29361:intron | 40.0% | |
| ACTTGGCGATTTGAATGAGA+AGG | + | chr3.2:68712746-68712765 | MS.gene29361:CDS | 40.0% | |
| AGAAGCTTTCCTATTCTTGG+TGG | + | chr3.2:68709969-68709988 | MS.gene29361:CDS | 40.0% | |
| AGAGAGAGTGATATGTCTTC+AGG | - | chr3.2:68712068-68712087 | None:intergenic | 40.0% | |
| AGGAGAAGCTTTCCTATTCT+TGG | + | chr3.2:68709966-68709985 | MS.gene29361:CDS | 40.0% | |
| ATTGGGAATCAAACTCGAGT+AGG | - | chr3.2:68709233-68709252 | None:intergenic | 40.0% | |
| CAACAACAACACCAACAACA+TGG | + | chr3.2:68708806-68708825 | MS.gene29361:CDS | 40.0% | |
| CAACATGGCTGAGTATTATC+TGG | + | chr3.2:68711948-68711967 | MS.gene29361:intron | 40.0% | |
| CACCTTGATCATACTAACAC+CGG | - | chr3.2:68711435-68711454 | None:intergenic | 40.0% | |
| CAGAGAGATGAAAAGAACAC+AGG | - | chr3.2:68712338-68712357 | None:intergenic | 40.0% | |
| CATATTCAGCGACTTGTCAT+TGG | + | chr3.2:68709747-68709766 | MS.gene29361:intron | 40.0% | |
| CTATGTATTGGATTGCCTGT+AGG | - | chr3.2:68708834-68708853 | None:intergenic | 40.0% | |
| GAAAAGAACACAGGATTGTC+AGG | - | chr3.2:68712329-68712348 | None:intergenic | 40.0% | |
| GAAATGAATTGTCTTGTGGC+AGG | + | chr3.2:68710737-68710756 | MS.gene29361:CDS | 40.0% | |
| GACTGTTAACAAAGTGCAAG+AGG | + | chr3.2:68711627-68711646 | MS.gene29361:CDS | 40.0% | |
| GATTTCATACAACATCGGTC+AGG | + | chr3.2:68712097-68712116 | MS.gene29361:CDS | 40.0% | |
| GCCAATCAGACGATGATAAA+AGG | + | chr3.2:68709901-68709920 | MS.gene29361:CDS | 40.0% | |
| GTTAGTTGAAAGGTTTCCGA+TGG | + | chr3.2:68712686-68712705 | MS.gene29361:CDS | 40.0% | |
| TACTCGAGTTTGATTCCCAA+TGG | + | chr3.2:68709232-68709251 | MS.gene29361:intron | 40.0% | |
| TAGGGCTTTCTAATGGTAAC+AGG | + | chr3.2:68709946-68709965 | MS.gene29361:CDS | 40.0% | |
| TATACTGGTGGCAAGATACA+TGG | + | chr3.2:68712717-68712736 | MS.gene29361:CDS | 40.0% | |
| TCAAAAAGAAGCAAGGTCAG+AGG | - | chr3.2:68710937-68710956 | None:intergenic | 40.0% | |
| TCTCATCTCGCTCTTGATAT+TGG | + | chr3.2:68708957-68708976 | MS.gene29361:CDS | 40.0% | |
| TCTTCTGCTTTGATGCTATG+AGG | + | chr3.2:68710607-68710626 | MS.gene29361:intron | 40.0% | |
| TGGTGCATCAGTTAGTTGAA+AGG | + | chr3.2:68712676-68712695 | MS.gene29361:CDS | 40.0% | |
| TGTATCTTGCCACCAGTATA+TGG | - | chr3.2:68712717-68712736 | None:intergenic | 40.0% | |
| TTCTCATTCAAATCGCCAAG+TGG | - | chr3.2:68712747-68712766 | None:intergenic | 40.0% | |
| TTGCGACATGAAGGATTTCT+GGG | + | chr3.2:68712603-68712622 | MS.gene29361:CDS | 40.0% | |
| TTGGGAATCAAACTCGAGTA+GGG | - | chr3.2:68709232-68709251 | None:intergenic | 40.0% | |
| TTTAAGTCAGCTTGATAGGG+AGG | + | chr3.2:68710820-68710839 | MS.gene29361:intron | 40.0% | |
| TTTGCGACATGAAGGATTTC+TGG | + | chr3.2:68712602-68712621 | MS.gene29361:CDS | 40.0% | |
| ! | AAGCAATAGTGGAAGCTGAT+AGG | - | chr3.2:68711995-68712014 | None:intergenic | 40.0% |
| ! | ATGCTTGTTGGGGACATTTA+TGG | + | chr3.2:68711785-68711804 | MS.gene29361:CDS | 40.0% |
| ! | CATTTTGTGATGAAGGCTAC+TGG | + | chr3.2:68710647-68710666 | MS.gene29361:intron | 40.0% |
| ! | GCTTTGCTAACATCAAGTTG+AGG | - | chr3.2:68708870-68708889 | None:intergenic | 40.0% |
| ! | GGGGTTAGAGTTAGCATTTT+GGG | + | chr3.2:68709148-68709167 | MS.gene29361:intron | 40.0% |
| ! | TTCCGGTGTTAGTATGATCA+AGG | + | chr3.2:68711430-68711449 | MS.gene29361:CDS | 40.0% |
| !! | AGCAAATGAAAGAGTGTCCA+TGG | - | chr3.2:68712443-68712462 | None:intergenic | 40.0% |
| !! | ATGTTGGTGGTGGTACTTAT+TGG | + | chr3.2:68711594-68711613 | MS.gene29361:CDS | 40.0% |
| !! | CTTGGTATTGACGAATCTGA+AGG | + | chr3.2:68708780-68708799 | MS.gene29361:CDS | 40.0% |
| !! | GTGTACTTTTCAAGACACGA+AGG | + | chr3.2:68709879-68709898 | MS.gene29361:CDS | 40.0% |
| !! | TGTTGGTGGTGGTACTTATT+GGG | + | chr3.2:68711595-68711614 | MS.gene29361:CDS | 40.0% |
| ACTTACCTCCCAGATCACTA+TGG | + | chr3.2:68709277-68709296 | MS.gene29361:intron | 45.0% | |
| AGAGCTATCGACATGCTTGT+TGG | + | chr3.2:68711773-68711792 | MS.gene29361:CDS | 45.0% | |
| ATGTCGCAAAAACATCGCCT+GGG | - | chr3.2:68712592-68712611 | None:intergenic | 45.0% | |
| ATTGGTCAAGCCGGAAAACA+CGG | + | chr3.2:68709523-68709542 | MS.gene29361:intron | 45.0% | |
| CAACTAACTGATGCACCATG+AGG | - | chr3.2:68712674-68712693 | None:intergenic | 45.0% | |
| CATCTCGCTCTTGATATTGG+AGG | + | chr3.2:68708960-68708979 | MS.gene29361:CDS | 45.0% | |
| CCATGAAGCTTTCACACACA+TGG | + | chr3.2:68711340-68711359 | MS.gene29361:CDS | 45.0% | |
| CCATGTGTGTGAAAGCTTCA+TGG | - | chr3.2:68711343-68711362 | None:intergenic | 45.0% | |
| CTCAAGCAACTCATCAAAGC+TGG | - | chr3.2:68711732-68711751 | None:intergenic | 45.0% | |
| CTCTAACCCCCACCTAAAAA+AGG | - | chr3.2:68709138-68709157 | None:intergenic | 45.0% | |
| CTTGTTGGGGACATTTATGG+TGG | + | chr3.2:68711788-68711807 | MS.gene29361:CDS | 45.0% | |
| GAAAGGAGCCATAGTGATCT+GGG | - | chr3.2:68709288-68709307 | None:intergenic | 45.0% | |
| GAAGCTTTCACACACATGGA+GGG | + | chr3.2:68711344-68711363 | MS.gene29361:CDS | 45.0% | |
| GAGCGATTAGGGCTTTCTAA+TGG | + | chr3.2:68709939-68709958 | MS.gene29361:CDS | 45.0% | |
| GAGCTATCGACATGCTTGTT+GGG | + | chr3.2:68711774-68711793 | MS.gene29361:CDS | 45.0% | |
| GCATCAAAGCAGAAGACAAG+TGG | - | chr3.2:68710603-68710622 | None:intergenic | 45.0% | |
| GCATGGTTTAGATGACCTCA+TGG | + | chr3.2:68712656-68712675 | MS.gene29361:CDS | 45.0% | |
| GCTTTCCTATTCTTGGTGGA+AGG | + | chr3.2:68709973-68709992 | MS.gene29361:CDS | 45.0% | |
| GGCAGGATCTCTGATAAAGT+TGG | + | chr3.2:68709857-68709876 | MS.gene29361:intron | 45.0% | |
| GTCACGTTACTCAGATACTG+AGG | + | chr3.2:68710232-68710251 | MS.gene29361:CDS | 45.0% | |
| GTTAGTGGGACAAATGTTGG+TGG | + | chr3.2:68711581-68711600 | MS.gene29361:CDS | 45.0% | |
| TAAACCAGGGGATTGAGCTT+CGG | + | chr3.2:68709191-68709210 | MS.gene29361:intron | 45.0% | |
| TAGCAGACTATATCCCACCA+CGG | - | chr3.2:68710070-68710089 | None:intergenic | 45.0% | |
| TCATTCAAATCGCCAAGTGG+TGG | - | chr3.2:68712744-68712763 | None:intergenic | 45.0% | |
| TCTAGTTACAGCAAGCCCTT+AGG | - | chr3.2:68712489-68712508 | None:intergenic | 45.0% | |
| TCTGGGAGGTAAGTAAAGTC+TGG | - | chr3.2:68709271-68709290 | None:intergenic | 45.0% | |
| TGAAGCCTTCCACCAAGAAT+AGG | - | chr3.2:68709981-68710000 | None:intergenic | 45.0% | |
| TGAAGCTTTCACACACATGG+AGG | + | chr3.2:68711343-68711362 | MS.gene29361:CDS | 45.0% | |
| TGGGAATCAAACTCGAGTAG+GGG | - | chr3.2:68709231-68709250 | None:intergenic | 45.0% | |
| TGGGGACATTTATGGTGGTT+TGG | + | chr3.2:68711793-68711812 | MS.gene29361:CDS | 45.0% | |
| TTTGTGATGAAGGCTACTGG+AGG | + | chr3.2:68710650-68710669 | MS.gene29361:intron | 45.0% | |
| ! | AGCTATCGACATGCTTGTTG+GGG | + | chr3.2:68711775-68711794 | MS.gene29361:CDS | 45.0% |
| ! | AGGGTTAGTGGGACAAATGT+TGG | + | chr3.2:68711578-68711597 | MS.gene29361:CDS | 45.0% |
| ! | GAAGGATTTCTGGGAGCTTT+AGG | + | chr3.2:68712612-68712631 | MS.gene29361:CDS | 45.0% |
| ! | GGAAGTTTGAGAGGGTTAGT+GGG | + | chr3.2:68711567-68711586 | MS.gene29361:CDS | 45.0% |
| ! | GGGGGTTAGAGTTAGCATTT+TGG | + | chr3.2:68709147-68709166 | MS.gene29361:intron | 45.0% |
| !! | ATCAAGTTGAGGCCTTGAAC+TGG | - | chr3.2:68708859-68708878 | None:intergenic | 45.0% |
| !! | GCGATGTTTTTGCGACATGA+AGG | + | chr3.2:68712594-68712613 | MS.gene29361:CDS | 45.0% |
| !! | GTTGGTGGTGGTACTTATTG+GGG | + | chr3.2:68711596-68711615 | MS.gene29361:CDS | 45.0% |
| !! | TGTCATAGGTTGATGGGGAT+GGG | + | chr3.2:68711546-68711565 | MS.gene29361:intron | 45.0% |
| !! | TTGTCATAGGTTGATGGGGA+TGG | + | chr3.2:68711545-68711564 | MS.gene29361:intron | 45.0% |
| AAGACAACATGACAGGTGCG+AGG | - | chr3.2:68709401-68709420 | None:intergenic | 50.0% | |
| ACAACATCGGTCAGGTGAGT+TGG | + | chr3.2:68712105-68712124 | MS.gene29361:intron | 50.0% | |
| ACCAACAACATGGCTCCTAC+AGG | + | chr3.2:68708816-68708835 | MS.gene29361:CDS | 50.0% | |
| ATGGGGATGGGAAGTTTGAG+AGG | + | chr3.2:68711558-68711577 | MS.gene29361:CDS | 50.0% | |
| ATGGGTGCTCCATATACTGG+TGG | + | chr3.2:68712705-68712724 | MS.gene29361:CDS | 50.0% | |
| CAGGGGTCATGCTTATACCA+TGG | + | chr3.2:68712423-68712442 | MS.gene29361:CDS | 50.0% | |
| CATGTCGCAAAAACATCGCC+TGG | - | chr3.2:68712593-68712612 | None:intergenic | 50.0% | |
| CATTCAAAGCAGCTTCACCG+TGG | + | chr3.2:68710050-68710069 | MS.gene29361:CDS | 50.0% | |
| GGAAAGGAGCCATAGTGATC+TGG | - | chr3.2:68709289-68709308 | None:intergenic | 50.0% | |
| GGGAAGTTTGAGAGGGTTAG+TGG | + | chr3.2:68711566-68711585 | MS.gene29361:CDS | 50.0% | |
| GGGAATCAAACTCGAGTAGG+GGG | - | chr3.2:68709230-68709249 | None:intergenic | 50.0% | |
| GGTGGTACTTATTGGGGACT+GGG | + | chr3.2:68711602-68711621 | MS.gene29361:CDS | 50.0% | |
| TGGGGATGGGAAGTTTGAGA+GGG | + | chr3.2:68711559-68711578 | MS.gene29361:CDS | 50.0% | |
| TGGTGGTACTTATTGGGGAC+TGG | + | chr3.2:68711601-68711620 | MS.gene29361:CDS | 50.0% | |
| TTGCTTGAGCTGAGCCAGAA+AGG | + | chr3.2:68711743-68711762 | MS.gene29361:CDS | 50.0% | |
| TTGGTCAAGCCGGAAAACAC+GGG | + | chr3.2:68709524-68709543 | MS.gene29361:intron | 50.0% | |
| ! | AGTGGGACAAATGTTGGTGG+TGG | + | chr3.2:68711584-68711603 | MS.gene29361:CDS | 50.0% |
| ! | CCAGTATATGGAGCACCCAT+CGG | - | chr3.2:68712705-68712724 | None:intergenic | 50.0% |
| AAAACACGGGAGGGTCGAGA+TGG | + | chr3.2:68709537-68709556 | MS.gene29361:intron | 55.0% | |
| AGGAGCCATAGTGATCTGGG+AGG | - | chr3.2:68709285-68709304 | None:intergenic | 55.0% | |
| CAAAGCAGCTTCACCGTGGT+GGG | + | chr3.2:68710054-68710073 | MS.gene29361:intron | 55.0% | |
| CCGATGGGTGCTCCATATAC+TGG | + | chr3.2:68712702-68712721 | MS.gene29361:CDS | 55.0% | |
| GCCTGTAGGAGCCATGTTGT+TGG | - | chr3.2:68708820-68708839 | None:intergenic | 55.0% | |
| GTGATGAAGGCTACTGGAGG+TGG | + | chr3.2:68710653-68710672 | MS.gene29361:intron | 55.0% | |
| TAGGTCCAATGGAGAAGCCC+AGG | + | chr3.2:68712572-68712591 | MS.gene29361:intron | 55.0% | |
| TCAAAGCAGCTTCACCGTGG+TGG | + | chr3.2:68710053-68710072 | MS.gene29361:intron | 55.0% | |
| TCAAGCCGGAAAACACGGGA+GGG | + | chr3.2:68709528-68709547 | MS.gene29361:intron | 55.0% | |
| ACCACCGAAGCTCAATCCCC+TGG | - | chr3.2:68709198-68709217 | None:intergenic | 60.0% | |
| ACCAGGGGATTGAGCTTCGG+TGG | + | chr3.2:68709194-68709213 | MS.gene29361:intron | 60.0% | |
| CATCGCCTGGGCTTCTCCAT+TGG | - | chr3.2:68712580-68712599 | None:intergenic | 60.0% | |
| GTCAAGCCGGAAAACACGGG+AGG | + | chr3.2:68709527-68709546 | MS.gene29361:intron | 60.0% | |
| ! | CTCGACCCTCCCGTGTTTTC+CGG | - | chr3.2:68709536-68709555 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 68708741 | 68712866 | 68708741 | ID=MS.gene29361 |
| chr3.2 | mRNA | 68708741 | 68712866 | 68708741 | ID=MS.gene29361.t1;Parent=MS.gene29361 |
| chr3.2 | exon | 68708741 | 68708981 | 68708741 | ID=MS.gene29361.t1.exon1;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68708741 | 68708981 | 68708741 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68709862 | 68710071 | 68709862 | ID=MS.gene29361.t1.exon2;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68709862 | 68710071 | 68709862 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68710225 | 68710277 | 68710225 | ID=MS.gene29361.t1.exon3;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68710225 | 68710277 | 68710225 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68710662 | 68710778 | 68710662 | ID=MS.gene29361.t1.exon4;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68710662 | 68710778 | 68710662 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68711332 | 68711451 | 68711332 | ID=MS.gene29361.t1.exon5;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68711332 | 68711451 | 68711332 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68711554 | 68711648 | 68711554 | ID=MS.gene29361.t1.exon6;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68711554 | 68711648 | 68711554 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68711733 | 68711826 | 68711733 | ID=MS.gene29361.t1.exon7;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68711733 | 68711826 | 68711733 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68711987 | 68712118 | 68711987 | ID=MS.gene29361.t1.exon8;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68711987 | 68712118 | 68711987 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68712361 | 68712473 | 68712361 | ID=MS.gene29361.t1.exon9;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68712361 | 68712473 | 68712361 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| chr3.2 | exon | 68712575 | 68712866 | 68712575 | ID=MS.gene29361.t1.exon10;Parent=MS.gene29361.t1 |
| chr3.2 | CDS | 68712575 | 68712866 | 68712575 | ID=cds.MS.gene29361.t1;Parent=MS.gene29361.t1 |
| Gene Sequence |
| Protein sequence |
