Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38615.t1 | XP_003602850.1 | 81.7 | 300 | 47 | 2 | 1 | 298 | 18 | 311 | 3.90E-121 | 444.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38615.t1 | Q9C7T4 | 59.7 | 206 | 61 | 2 | 100 | 297 | 120 | 311 | 7.5e-57 | 222.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38615.t1 | F0V437 | 81.7 | 300 | 47 | 2 | 1 | 298 | 18 | 311 | 2.8e-121 | 444.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38615 | -0.824124 | 9.56E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene38615 | -0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene38615 | -0.805582 | 1.25E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene38615 | -0.840871 | 6.70E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene38615 | -0.810493 | 1.12E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene38615 | 0.809677 | 1.68E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene38615 | -0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene38615 | -0.829671 | 4.52E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene38615 | -0.861841 | 7.73E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene38615 | -0.820537 | 6.51E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene38615 | -0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene38615 | -0.830096 | 3.56E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene38615 | -0.829102 | 6.21E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene38615 | -0.820417 | 6.94E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene38615 | -0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene38615 | -0.804949 | 1.69E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene38615 | 0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene38615 | -0.820469 | 6.75E-53 | -1.69E-46 |
| MS.gene051439 | MS.gene38615 | 0.832069 | 1.17E-55 | -1.69E-46 |
| MS.gene051517 | MS.gene38615 | 0.814305 | 1.65E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene38615 | 0.836258 | 1.04E-56 | -1.69E-46 |
| MS.gene051973 | MS.gene38615 | 0.824333 | 8.54E-54 | -1.69E-46 |
| MS.gene052100 | MS.gene38615 | -0.807393 | 5.17E-50 | -1.69E-46 |
| MS.gene052129 | MS.gene38615 | 0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene38615 | -0.815089 | 1.11E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene38615 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene052494 | MS.gene38615 | 0.827888 | 1.22E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene38615 | -0.802965 | 4.37E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene38615 | 0.828583 | 8.29E-55 | -1.69E-46 |
| MS.gene052705 | MS.gene38615 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene38615 | -0.815002 | 1.16E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene38615 | -0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene38615 | 0.840522 | 8.26E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene38615 | -0.824965 | 6.06E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene38615 | -0.832747 | 7.92E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene38615 | -0.800555 | 1.36E-48 | -1.69E-46 |
| MS.gene054633 | MS.gene38615 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene38615 | 0.800576 | 1.35E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene38615 | -0.871023 | 9.37E-67 | -1.69E-46 |
| MS.gene054742 | MS.gene38615 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene38615 | 0.815935 | 7.16E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene38615 | -0.805355 | 1.39E-49 | -1.69E-46 |
| MS.gene055158 | MS.gene38615 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene38615 | -0.81507 | 1.12E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene38615 | -0.81586 | 7.44E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene38615 | -0.859787 | 3.25E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene38615 | -0.828494 | 8.72E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene38615 | -0.852705 | 3.87E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene38615 | -0.856498 | 3.09E-62 | -1.69E-46 |
| MS.gene056218 | MS.gene38615 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene38615 | -0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene38615 | -0.815242 | 1.02E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene38615 | -0.834046 | 3.76E-56 | -1.69E-46 |
| MS.gene056590 | MS.gene38615 | 0.81537 | 9.57E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene38615 | 0.816174 | 6.34E-52 | -1.69E-46 |
| MS.gene056678 | MS.gene38615 | 0.81456 | 1.45E-51 | -1.69E-46 |
| MS.gene056688 | MS.gene38615 | 0.816267 | 6.04E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene38615 | -0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene056694 | MS.gene38615 | 0.86005 | 2.71E-63 | -1.69E-46 |
| MS.gene056697 | MS.gene38615 | 0.840611 | 7.83E-58 | -1.69E-46 |
| MS.gene056748 | MS.gene38615 | 0.817496 | 3.20E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene38615 | 0.826794 | 2.23E-54 | -1.69E-46 |
| MS.gene056988 | MS.gene38615 | 0.817782 | 2.76E-52 | -1.69E-46 |
| MS.gene057494 | MS.gene38615 | 0.803327 | 3.68E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene38615 | -0.820796 | 5.68E-53 | -1.69E-46 |
| MS.gene057717 | MS.gene38615 | 0.80868 | 2.75E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene38615 | 0.846635 | 1.92E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene38615 | -0.808116 | 3.63E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene38615 | 0.835141 | 1.99E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene38615 | -0.810251 | 1.27E-50 | -1.69E-46 |
| MS.gene058418 | MS.gene38615 | 0.826237 | 3.03E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene38615 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene38615 | -0.820223 | 7.68E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene38615 | 0.80389 | 2.81E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene38615 | -0.826396 | 2.78E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene38615 | -0.822763 | 1.99E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene38615 | -0.827198 | 1.79E-54 | -1.69E-46 |
| MS.gene05926 | MS.gene38615 | 0.825197 | 5.34E-54 | -1.69E-46 |
| MS.gene05960 | MS.gene38615 | 0.808198 | 3.48E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene38615 | -0.808222 | 3.44E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene38615 | -0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene38615 | -0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene38615 | -0.853876 | 1.79E-61 | -1.69E-46 |
| MS.gene060087 | MS.gene38615 | 0.835409 | 1.71E-56 | -1.69E-46 |
| MS.gene060405 | MS.gene38615 | 0.802712 | 4.93E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene38615 | -0.821813 | 3.31E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene38615 | -0.834841 | 2.37E-56 | -1.69E-46 |
| MS.gene06084 | MS.gene38615 | 0.816361 | 5.75E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene38615 | -0.84036 | 9.11E-58 | -1.69E-46 |
| MS.gene061038 | MS.gene38615 | 0.808796 | 2.60E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene38615 | 0.847934 | 8.44E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTAAAAATTAAA+TGG | - | 21146:13045-13064 | MS.gene38615:intergenic | 0.0% |
| !! | AAATATAATTAGAAAGTTAA+CGG | - | 21146:11855-11874 | MS.gene38615:intergenic | 10.0% |
| !!! | AATTTTTATTTATTGATTGT+TGG | + | 21146:12162-12181 | MS.gene38615:intron | 10.0% |
| !!! | TAAATATGCATTTTTTATAA+TGG | - | 21146:12340-12359 | MS.gene38615:intergenic | 10.0% |
| !!! | TTAAAATTATTTATTTCTGT+TGG | + | 21146:13016-13035 | MS.gene38615:intron | 10.0% |
| !!! | TTAATTAATTTATGAGTTTT+GGG | + | 21146:13090-13109 | MS.gene38615:intron | 10.0% |
| !! | AATATAATTAGAAAGTTAAC+GGG | - | 21146:11854-11873 | MS.gene38615:intergenic | 15.0% |
| !! | TATTTGCATATTTATTTATG+TGG | + | 21146:12137-12156 | MS.gene38615:intron | 15.0% |
| !! | TTTAAGCTCTTAAAAAAATT+AGG | - | 21146:12216-12235 | MS.gene38615:intergenic | 15.0% |
| !!! | AGTAGAAATTTTAAGTAATT+TGG | + | 21146:13067-13086 | MS.gene38615:intron | 15.0% |
| !!! | GTTAATTAATTTATGAGTTT+TGG | + | 21146:13089-13108 | MS.gene38615:intron | 15.0% |
| !!! | TTACAATTTTTTTTTTGCAA+AGG | + | 21146:12381-12400 | MS.gene38615:intron | 15.0% |
| !! | AATTGTTATGTGAGTTAAAA+TGG | + | 21146:12502-12521 | MS.gene38615:intron | 20.0% |
| !!! | ATTTGTTTTACTTATGATAG+AGG | + | 21146:11935-11954 | MS.gene38615:intron | 20.0% |
| ! | ACACTAGTAGTACATAAAAA+GGG | + | 21146:12248-12267 | MS.gene38615:intron | 25.0% |
| ! | ACATTCAAAGTGAAAATTGA+AGG | - | 21146:11884-11903 | MS.gene38615:intergenic | 25.0% |
| ! | AGCTAACACTCAATAAAAAT+TGG | + | 21146:12030-12049 | MS.gene38615:intron | 25.0% |
| ! | ATACAAAATTCCATGTGTAT+TGG | + | 21146:12545-12564 | MS.gene38615:intron | 25.0% |
| ! | CATTCAAAGTGAAAATTGAA+GGG | - | 21146:11883-11902 | MS.gene38615:intergenic | 25.0% |
| ! | TGTATTGGATTGAAAAAACA+GGG | + | 21146:12560-12579 | MS.gene38615:intron | 25.0% |
| !! | AACTTATGAAGATTGTTGTT+GGG | + | 21146:12894-12913 | MS.gene38615:CDS | 25.0% |
| !! | AAGTTGTCTTTAAAGAATTG+TGG | + | 21146:12000-12019 | MS.gene38615:intron | 25.0% |
| !! | AGTTGTCTTTAAAGAATTGT+GGG | + | 21146:12001-12020 | MS.gene38615:intron | 25.0% |
| !! | ATTTTCACTTTGAATGTATG+TGG | + | 21146:11887-11906 | MS.gene38615:intron | 25.0% |
| !! | CTTGCTATGATAAAAGATTA+TGG | - | 21146:12310-12329 | MS.gene38615:intergenic | 25.0% |
| !! | TTTTCACTTTGAATGTATGT+GGG | + | 21146:11888-11907 | MS.gene38615:intron | 25.0% |
| !!! | TTTTTTCAATCCAATACACA+TGG | - | 21146:12558-12577 | MS.gene38615:intergenic | 25.0% |
| AAAGTGAAGAATTCAGCAAA+AGG | - | 21146:12713-12732 | MS.gene38615:intergenic | 30.0% | |
| AACAACATTTACAGTCTATG+GGG | + | 21146:12633-12652 | MS.gene38615:CDS | 30.0% | |
| AAGAGGAGATTGAAAATCAA+AGG | + | 21146:11548-11567 | MS.gene38615:CDS | 30.0% | |
| AGAACAACATTTACAGTCTA+TGG | + | 21146:12631-12650 | MS.gene38615:CDS | 30.0% | |
| ATTACCAAGAACACAAACAA+TGG | + | 21146:12795-12814 | MS.gene38615:CDS | 30.0% | |
| ATTCTATCCAAGAAAAAACC+AGG | + | 21146:12869-12888 | MS.gene38615:CDS | 30.0% | |
| CAACTTATGAAGATTGTTGT+TGG | + | 21146:12893-12912 | MS.gene38615:CDS | 30.0% | |
| GAACAACATTTACAGTCTAT+GGG | + | 21146:12632-12651 | MS.gene38615:CDS | 30.0% | |
| GACACATAAATGCAAATCTA+TGG | + | 21146:12052-12071 | MS.gene38615:intron | 30.0% | |
| GACACTAGTAGTACATAAAA+AGG | + | 21146:12247-12266 | MS.gene38615:intron | 30.0% | |
| GAGAACATAGGCTTAAATAA+TGG | + | 21146:12683-12702 | MS.gene38615:CDS | 30.0% | |
| GGTAACATTAAGATGAAGAA+TGG | - | 21146:12939-12958 | MS.gene38615:intergenic | 30.0% | |
| GTGTATTGGATTGAAAAAAC+AGG | + | 21146:12559-12578 | MS.gene38615:intron | 30.0% | |
| TACTTATGATAGAGGAAAGA+TGG | + | 21146:11943-11962 | MS.gene38615:intron | 30.0% | |
| TCTTCATCTTAATGTTACCA+CGG | + | 21146:12940-12959 | MS.gene38615:CDS | 30.0% | |
| TTACCAAGAACACAAACAAT+GGG | + | 21146:12796-12815 | MS.gene38615:CDS | 30.0% | |
| TTCTGTTAAGGATCATCAAT+GGG | + | 21146:11387-11406 | MS.gene38615:CDS | 30.0% | |
| TTGTTGGGTTACAAAATCTT+AGG | + | 21146:12909-12928 | MS.gene38615:CDS | 30.0% | |
| ! | CTTGGATAGAATTTTCATGT+TGG | - | 21146:12861-12880 | MS.gene38615:intergenic | 30.0% |
| !! | TTGGTTGTTTCGTTTTCTTT+TGG | - | 21146:12661-12680 | MS.gene38615:intergenic | 30.0% |
| !!! | AGTTTTGGGTATGAATTGAT+TGG | + | 21146:13104-13123 | MS.gene38615:intron | 30.0% |
| AAACAACCAAACGAGAACAT+AGG | + | 21146:12671-12690 | MS.gene38615:CDS | 35.0% | |
| ACAACATTTACAGTCTATGG+GGG | + | 21146:12634-12653 | MS.gene38615:CDS | 35.0% | |
| ACAATCTTCATAAGTTGTCC+TGG | - | 21146:12890-12909 | MS.gene38615:intergenic | 35.0% | |
| ACCCTTTGAACATAAGAAGA+AGG | - | 21146:11649-11668 | MS.gene38615:intergenic | 35.0% | |
| AGGAGCAATAAACTTTGTGA+AGG | + | 21146:12604-12623 | MS.gene38615:CDS | 35.0% | |
| CCTAAAGCTCACTCAAAAAA+CGG | - | 21146:12083-12102 | MS.gene38615:intergenic | 35.0% | |
| CTGCTGTGAATCAACTATTA+AGG | + | 21146:13175-13194 | MS.gene38615:CDS | 35.0% | |
| GAATAGTGTGGATGAAATTG+CGG | + | 21146:13152-13171 | MS.gene38615:CDS | 35.0% | |
| GCCTTCTTCTTATGTTCAAA+GGG | + | 21146:11645-11664 | MS.gene38615:CDS | 35.0% | |
| GTTCTGTTAAGGATCATCAA+TGG | + | 21146:11386-11405 | MS.gene38615:CDS | 35.0% | |
| TCTTTACTCAGTTAGTGTCA+AGG | + | 21146:12976-12995 | MS.gene38615:CDS | 35.0% | |
| TGACTATGATCATCTTCATG+CGG | + | 21146:11291-11310 | MS.gene38615:CDS | 35.0% | |
| TGCCTTCTTCTTATGTTCAA+AGG | + | 21146:11644-11663 | MS.gene38615:CDS | 35.0% | |
| TTTAAGCCTATGTTCTCGTT+TGG | - | 21146:12680-12699 | MS.gene38615:intergenic | 35.0% | |
| !! | GTTCATTGTTGATGATTCCT+AGG | - | 21146:11336-11355 | MS.gene38615:intergenic | 35.0% |
| !!! | AAGTTGTCCTGGTTTTTTCT+TGG | - | 21146:12879-12898 | MS.gene38615:intergenic | 35.0% |
| AACAAGAATCCCAGTTTGCA+TGG | - | 21146:11369-11388 | MS.gene38615:intergenic | 40.0% | |
| AGCAAAATCTCCATGCAAAC+TGG | + | 21146:11356-11375 | MS.gene38615:CDS | 40.0% | |
| AGCCGTGATAGTTTGATCAA+CGG | - | 21146:11446-11465 | MS.gene38615:intergenic | 40.0% | |
| CAACAACAACAACGTCACAA+TGG | + | 21146:12763-12782 | MS.gene38615:CDS | 40.0% | |
| CAACATTTACAGTCTATGGG+GGG | + | 21146:12635-12654 | MS.gene38615:CDS | 40.0% | |
| CACCGTTGATCAAACTATCA+CGG | + | 21146:11441-11460 | MS.gene38615:CDS | 40.0% | |
| CACTTTGAATGTATGTGGGT+AGG | + | 21146:11892-11911 | MS.gene38615:intron | 40.0% | |
| CTCCTCCAATAATAGAAGCT+TGG | - | 21146:12589-12608 | MS.gene38615:intergenic | 40.0% | |
| CTGGGATTCTTGTTCTGTTA+AGG | + | 21146:11375-11394 | MS.gene38615:CDS | 40.0% | |
| GAACAAGAGAATGTTCTCCT+AGG | + | 21146:11316-11335 | MS.gene38615:CDS | 40.0% | |
| GACCAAGCTTCTATTATTGG+AGG | + | 21146:12584-12603 | MS.gene38615:CDS | 40.0% | |
| GCAAAATCTCCATGCAAACT+GGG | + | 21146:11357-11376 | MS.gene38615:CDS | 40.0% | |
| GGCAGACATTGAAGTTACAA+TGG | + | 21146:12823-12842 | MS.gene38615:CDS | 40.0% | |
| GGTGACCAAGCTTCTATTAT+TGG | + | 21146:12581-12600 | MS.gene38615:CDS | 40.0% | |
| GTGAAGAATTCAGCAAAAGG+TGG | - | 21146:12710-12729 | MS.gene38615:intergenic | 40.0% | |
| ! | CAAGAGTGCAAAGAACAAAG+AGG | + | 21146:11531-11550 | MS.gene38615:CDS | 40.0% |
| !! | TGAGTGAGCTTTAGGTTGTT+TGG | + | 21146:12088-12107 | MS.gene38615:intron | 40.0% |
| !!! | CCGTTTTTTGAGTGAGCTTT+AGG | + | 21146:12080-12099 | MS.gene38615:intron | 40.0% |
| AAGAACCATATCATCGACCG+TGG | - | 21146:12960-12979 | MS.gene38615:intergenic | 45.0% | |
| CAGCCCATTGTTTGTGTTCT+TGG | - | 21146:12802-12821 | MS.gene38615:intergenic | 45.0% | |
| GAATTGATTGGAGCAGGTAG+AGG | + | 21146:13116-13135 | MS.gene38615:intron | 45.0% | |
| GGGTATGAATTGATTGGAGC+AGG | + | 21146:13110-13129 | MS.gene38615:intron | 45.0% | |
| TGATCAACGGTGCAGATTTC+AGG | - | 21146:11433-11452 | MS.gene38615:intergenic | 45.0% | |
| TGTTACCACGGTCGATGATA+TGG | + | 21146:12952-12971 | MS.gene38615:CDS | 45.0% | |
| !! | AGAACACAAACAATGGGCTG+TGG | + | 21146:12802-12821 | MS.gene38615:CDS | 45.0% |
| !! | GTTGCACTTGTTGTGTACTG+AGG | - | 21146:12737-12756 | MS.gene38615:intergenic | 45.0% |
| !!! | ATTTTAAATTTACTTAATTA+TGG | + | 21146:11828-11847 | MS.gene38615:intron | 5.0% |
| AACGGTGCAGATTTCAGGAG+AGG | - | 21146:11428-11447 | MS.gene38615:intergenic | 50.0% | |
| CAACAGCAACTGCAACGTGT+AGG | + | 21146:11491-11510 | MS.gene38615:CDS | 50.0% | |
| TGATTGGAGCAGGTAGAGGA+GGG | + | 21146:13120-13139 | MS.gene38615:intron | 50.0% | |
| TTGATTGGAGCAGGTAGAGG+AGG | + | 21146:13119-13138 | MS.gene38615:intron | 50.0% | |
| ! | TGCAGTTGCTGTTGCTTCCA+CGG | - | 21146:11485-11504 | MS.gene38615:intergenic | 50.0% |
| GATTGGAGCAGGTAGAGGAG+GGG | + | 21146:13121-13140 | MS.gene38615:intron | 55.0% | |
| GGGGAGTCAGCTGAATAGTG+TGG | + | 21146:13140-13159 | MS.gene38615:CDS | 55.0% | |
| GTTGCTTCCACGGTGGAAGA+AGG | - | 21146:11475-11494 | MS.gene38615:intergenic | 55.0% | |
| ! | AGTTGCTGTTGCTTCCACGG+TGG | - | 21146:11482-11501 | MS.gene38615:intergenic | 55.0% |
| GCTTCCACGGTGGAAGAAGG+AGG | - | 21146:11472-11491 | MS.gene38615:intergenic | 60.0% | |
| TCCACGGTGGAAGAAGGAGG+AGG | - | 21146:11469-11488 | MS.gene38615:intergenic | 60.0% | |
| TCCTCCTCCTTCTTCCACCG+TGG | + | 21146:11465-11484 | MS.gene38615:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21146 | gene | 11258 | 13200 | 11258 | ID=MS.gene38615 |
| 21146 | mRNA | 11258 | 13200 | 11258 | ID=MS.gene38615.t1;Parent=MS.gene38615 |
| 21146 | exon | 11258 | 11666 | 11258 | ID=MS.gene38615.t1.exon1;Parent=MS.gene38615.t1 |
| 21146 | CDS | 11258 | 11666 | 11258 | ID=cds.MS.gene38615.t1;Parent=MS.gene38615.t1 |
| 21146 | exon | 12581 | 12997 | 12581 | ID=MS.gene38615.t1.exon2;Parent=MS.gene38615.t1 |
| 21146 | CDS | 12581 | 12997 | 12581 | ID=cds.MS.gene38615.t1;Parent=MS.gene38615.t1 |
| 21146 | exon | 13132 | 13200 | 13132 | ID=MS.gene38615.t1.exon3;Parent=MS.gene38615.t1 |
| 21146 | CDS | 13132 | 13200 | 13132 | ID=cds.MS.gene38615.t1;Parent=MS.gene38615.t1 |
| Gene Sequence |
| Protein sequence |
