Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39299.t1 | KEH18036.1 | 96.6 | 320 | 11 | 0 | 1 | 320 | 1 | 320 | 9.70E-171 | 609.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39299.t1 | P19672 | 41.2 | 262 | 144 | 3 | 65 | 320 | 4 | 261 | 1.9e-45 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39299.t1 | A0A072TLE1 | 96.6 | 320 | 11 | 0 | 1 | 320 | 1 | 320 | 7.0e-171 | 609.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene39299 | -0.80562 | 1.22E-49 | -1.69E-46 |
| MS.gene049149 | MS.gene39299 | 0.84474 | 6.27E-59 | -1.69E-46 |
| MS.gene049150 | MS.gene39299 | 0.818314 | 2.09E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene39299 | 0.829116 | 6.16E-55 | -1.69E-46 |
| MS.gene049260 | MS.gene39299 | 0.807932 | 3.97E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene39299 | 0.8166 | 5.09E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene39299 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene39299 | 0.830775 | 2.43E-55 | -1.69E-46 |
| MS.gene049910 | MS.gene39299 | 0.826605 | 2.48E-54 | -1.69E-46 |
| MS.gene049993 | MS.gene39299 | 0.82743 | 1.57E-54 | -1.69E-46 |
| MS.gene050168 | MS.gene39299 | 0.804893 | 1.74E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene39299 | 0.801558 | 8.51E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene39299 | 0.817117 | 3.89E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene39299 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene39299 | 0.842022 | 3.33E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene39299 | -0.812218 | 4.74E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene39299 | 0.800987 | 1.11E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene39299 | -0.829671 | 4.52E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene39299 | 0.850301 | 1.86E-60 | -1.69E-46 |
| MS.gene050529 | MS.gene39299 | 0.836234 | 1.05E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene39299 | 0.858395 | 8.48E-63 | -1.69E-46 |
| MS.gene050560 | MS.gene39299 | 0.821866 | 3.21E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene39299 | 0.845294 | 4.44E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene39299 | 0.808326 | 3.27E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene39299 | 0.805968 | 1.03E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene39299 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene050820 | MS.gene39299 | 0.828703 | 7.76E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene39299 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene39299 | 0.827739 | 1.32E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene39299 | 0.820607 | 6.27E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene39299 | 0.897483 | 1.35E-76 | -1.69E-46 |
| MS.gene051983 | MS.gene39299 | 0.845767 | 3.31E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene39299 | -0.859458 | 4.08E-63 | -1.69E-46 |
| MS.gene052077 | MS.gene39299 | 0.831282 | 1.82E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene39299 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene052253 | MS.gene39299 | 0.856635 | 2.82E-62 | -1.69E-46 |
| MS.gene052255 | MS.gene39299 | 0.808965 | 2.39E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene39299 | 0.802908 | 4.49E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene39299 | 0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene39299 | 0.879575 | 1.11E-69 | -1.69E-46 |
| MS.gene053971 | MS.gene39299 | 0.802795 | 4.74E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene39299 | 0.813804 | 2.13E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene39299 | 0.808051 | 3.74E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene39299 | 0.861379 | 1.07E-63 | -1.69E-46 |
| MS.gene054473 | MS.gene39299 | 0.82915 | 6.05E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene39299 | 0.822482 | 2.31E-53 | -1.69E-46 |
| MS.gene054942 | MS.gene39299 | 0.825752 | 3.95E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene39299 | 0.834457 | 2.96E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene39299 | 0.805171 | 1.52E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene39299 | 0.806561 | 7.75E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene39299 | 0.805097 | 1.57E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene39299 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene39299 | 0.807179 | 5.74E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene39299 | 0.8241 | 9.69E-54 | -1.69E-46 |
| MS.gene055428 | MS.gene39299 | 0.828435 | 9.01E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene39299 | 0.834262 | 3.32E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene39299 | 0.823787 | 1.15E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene39299 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene39299 | 0.836753 | 7.78E-57 | -1.69E-46 |
| MS.gene056846 | MS.gene39299 | 0.803427 | 3.51E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene39299 | 0.806879 | 6.64E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene39299 | -0.840419 | 8.80E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene39299 | 0.83791 | 3.93E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene39299 | 0.881449 | 2.38E-70 | -1.69E-46 |
| MS.gene057245 | MS.gene39299 | 0.825946 | 3.55E-54 | -1.69E-46 |
| MS.gene057260 | MS.gene39299 | 0.807303 | 5.40E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene39299 | 0.813932 | 1.99E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene39299 | 0.800677 | 1.29E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene39299 | 0.862422 | 5.13E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene39299 | 0.865666 | 5.00E-65 | -1.69E-46 |
| MS.gene058139 | MS.gene39299 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene39299 | 0.858983 | 5.66E-63 | -1.69E-46 |
| MS.gene058276 | MS.gene39299 | 0.821784 | 3.36E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene39299 | 0.806062 | 9.87E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene39299 | 0.808386 | 3.18E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene39299 | 0.822659 | 2.10E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene39299 | 0.869474 | 3.01E-66 | -1.69E-46 |
| MS.gene059247 | MS.gene39299 | 0.823385 | 1.43E-53 | -1.69E-46 |
| MS.gene059294 | MS.gene39299 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene39299 | 0.836528 | 8.87E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene39299 | 0.821272 | 4.41E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene39299 | 0.86619 | 3.42E-65 | -1.69E-46 |
| MS.gene059894 | MS.gene39299 | 0.804466 | 2.13E-49 | -1.69E-46 |
| MS.gene060994 | MS.gene39299 | 0.811301 | 7.50E-51 | -1.69E-46 |
| MS.gene061000 | MS.gene39299 | 0.807096 | 5.97E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene39299 | 0.847831 | 9.02E-60 | -1.69E-46 |
| MS.gene061114 | MS.gene39299 | -0.845363 | 4.26E-59 | -1.69E-46 |
| MS.gene061159 | MS.gene39299 | 0.802475 | 5.51E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39299.t1 | MTR_8g010130 | 96.562 | 320 | 11 | 0 | 1 | 320 | 1 | 320 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39299.t1 | AT3G25470 | 65.625 | 288 | 88 | 4 | 18 | 304 | 15 | 292 | 7.77e-134 | 382 |
Find 75 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAAAGTGGCTCTTGATTC+TGG | 0.085818 | 8.2:-81006420 | MS.gene39299:CDS |
| ACTTCACCTACATACATATT+TGG | 0.107632 | 8.2:+81006581 | None:intergenic |
| AACCTGTTCCTGGGAGTTTA+AGG | 0.152022 | 8.2:+81008813 | None:intergenic |
| AGCACCTTTGTTATGGATTC+TGG | 0.250068 | 8.2:+81003558 | None:intergenic |
| TATGGTGCATCACATGTTTA+TGG | 0.255448 | 8.2:-81006360 | MS.gene39299:CDS |
| GACTCTCAGCACCTTTGTTA+TGG | 0.294955 | 8.2:+81003551 | None:intergenic |
| CTTGATTCTGGGTTGTCAAC+TGG | 0.311995 | 8.2:-81006408 | MS.gene39299:CDS |
| AGAGAGACAGAACCTGTTCC+TGG | 0.334458 | 8.2:+81008803 | None:intergenic |
| ACTGACTGCTTACTTCAGTA+TGG | 0.336135 | 8.2:-81006378 | MS.gene39299:CDS |
| TCTCCCACAAAATGTTGATT+TGG | 0.339694 | 8.2:-81004778 | MS.gene39299:CDS |
| ATGAAAGCTTACTTCTTGAT+TGG | 0.353202 | 8.2:+81008525 | None:intergenic |
| CTTCACCTACATACATATTT+GGG | 0.353556 | 8.2:+81006582 | None:intergenic |
| ACAAAAGGAGTAGAGAGTTT+TGG | 0.357615 | 8.2:-81003655 | MS.gene39299:CDS |
| CGCTTTGTAAACCTCGTAAC+TGG | 0.364745 | 8.2:+81008870 | None:intergenic |
| GTAAAGTGGCTCTTGATTCT+GGG | 0.374847 | 8.2:-81006419 | MS.gene39299:CDS |
| ATGGTGCATCACATGTTTAT+GGG | 0.384692 | 8.2:-81006359 | MS.gene39299:CDS |
| TGTATTGCTGATATTGTTCA+AGG | 0.392466 | 8.2:+81007489 | None:intergenic |
| TATGGGGTTGATGTAGGTTA+TGG | 0.393906 | 8.2:-81006342 | MS.gene39299:CDS |
| CTAAAGGCACCTCTTCTAAC+TGG | 0.413791 | 8.2:+81008582 | None:intergenic |
| CATGTTTATGGGGTTGATGT+AGG | 0.440941 | 8.2:-81006348 | MS.gene39299:CDS |
| GCAGGAAAAGTATATGTGAA+TGG | 0.441623 | 8.2:-81006672 | MS.gene39299:intron |
| AACCTTAAACTCCCAGGAAC+AGG | 0.443983 | 8.2:-81008815 | MS.gene39299:intron |
| TGCAGTAGCATAGCTTCTAA+AGG | 0.444449 | 8.2:+81008566 | None:intergenic |
| GAAAGATCCTGCTGTCCATC+AGG | 0.450203 | 8.2:-81004034 | MS.gene39299:CDS |
| TTCATAACATTTACCACAGC+AGG | 0.450854 | 8.2:+81004374 | None:intergenic |
| CAGGAAAAGTATATGTGAAT+GGG | 0.464845 | 8.2:-81006671 | MS.gene39299:CDS |
| AGAGATGAATGAGAGGTCTA+AGG | 0.476778 | 8.2:+81004752 | None:intergenic |
| GATCTCCGAGCTTCAAATTG+TGG | 0.489076 | 8.2:+81004320 | None:intergenic |
| TAACAAGGAAAAGAAAGTTA+AGG | 0.492483 | 8.2:+81008841 | None:intergenic |
| ACACAGAGCTGGACATAAGT+TGG | 0.499964 | 8.2:-81006478 | MS.gene39299:intron |
| TTGGTTTCTGCAGCAAAGGT+TGG | 0.516227 | 8.2:-81003636 | MS.gene39299:CDS |
| GATTCTGGGTTGTCAACTGG+AGG | 0.517187 | 8.2:-81006405 | MS.gene39299:CDS |
| CAAAATCCATGACTGGATGA+TGG | 0.526890 | 8.2:+81007460 | None:intergenic |
| CTCATTCATCTCTATTCTAA+CGG | 0.526964 | 8.2:-81004742 | MS.gene39299:intron |
| TTTGTCAGACACAGGTGTAC+CGG | 0.528102 | 8.2:+81006632 | None:intergenic |
| GTTCTCGAGAAGATTACAAA+AGG | 0.529217 | 8.2:-81003670 | MS.gene39299:CDS |
| TTAAACCACAATTTGAAGCT+CGG | 0.529956 | 8.2:-81004325 | MS.gene39299:CDS |
| TTGTCTGTGCAGGTAGGAAA+GGG | 0.533195 | 8.2:-81004066 | MS.gene39299:intron |
| ATTGTCTGTGCAGGTAGGAA+AGG | 0.535001 | 8.2:-81004067 | MS.gene39299:intron |
| CAGCTCGGTGTTGATGTTGC+TGG | 0.536492 | 8.2:-81006441 | MS.gene39299:CDS |
| CCCACCTCCTGATGGACAGC+AGG | 0.543395 | 8.2:+81004027 | None:intergenic |
| AGATGCTGCATTAGTGACCT+TGG | 0.544485 | 8.2:-81004348 | MS.gene39299:CDS |
| TTCAAATTGTGGTTTAACCA+AGG | 0.550670 | 8.2:+81004331 | None:intergenic |
| TACCTTGCAAAATCCATGAC+TGG | 0.558053 | 8.2:+81007453 | None:intergenic |
| GAGTTTAAGGTTTCGTAACA+AGG | 0.567840 | 8.2:+81008826 | None:intergenic |
| GAGAGACAGAACCTGTTCCT+GGG | 0.569631 | 8.2:+81008804 | None:intergenic |
| TGCTGTGGTAAATGTTATGA+AGG | 0.570448 | 8.2:-81004372 | MS.gene39299:CDS |
| GGTTGATGTAGGTTATGGAC+AGG | 0.571071 | 8.2:-81006337 | MS.gene39299:intron |
| AAGTTCCCAAATATGTATGT+AGG | 0.572052 | 8.2:-81006587 | MS.gene39299:intron |
| TTAACAGGTCATGCCTGCTG+TGG | 0.572262 | 8.2:-81004387 | MS.gene39299:intron |
| TGGATTGAGTCTCCTCTCAA+AGG | 0.573018 | 8.2:-81003616 | MS.gene39299:CDS |
| TTACGAAACCTTAAACTCCC+AGG | 0.573327 | 8.2:-81008821 | MS.gene39299:CDS |
| GGGAAGAGAATATTTAAAGC+CGG | 0.576887 | 8.2:-81006651 | MS.gene39299:CDS |
| ATCAACACCGAGCTGTTCGA+TGG | 0.580117 | 8.2:+81006449 | None:intergenic |
| TCTCCTCTCAAAGGTGCCGA+GGG | 0.583202 | 8.2:-81003607 | MS.gene39299:CDS |
| TTACCCTCGGCACCTTTGAG+AGG | 0.585809 | 8.2:+81003604 | None:intergenic |
| GTCTCCTCTCAAAGGTGCCG+AGG | 0.587183 | 8.2:-81003608 | MS.gene39299:CDS |
| GGATTCTGGTGAAGTGAACA+AGG | 0.600096 | 8.2:+81003572 | None:intergenic |
| GTAGATCCATCATCCAGTCA+TGG | 0.609232 | 8.2:-81007466 | MS.gene39299:CDS |
| GAGTCATGAAGAAATTAGAG+AGG | 0.609692 | 8.2:-81003533 | MS.gene39299:CDS |
| TGTTGATGTTGCTGGTAAAG+TGG | 0.616155 | 8.2:-81006433 | MS.gene39299:CDS |
| AAGGAATTCTGTATTACCCT+CGG | 0.624073 | 8.2:+81003591 | None:intergenic |
| GAAGGTGCCATCGAACAGCT+CGG | 0.626010 | 8.2:-81006456 | MS.gene39299:CDS |
| TCTGTGCAGGTAGGAAAGGG+AGG | 0.629300 | 8.2:-81004063 | MS.gene39299:intron |
| TGTGTCTGACAAATCTGTTG+TGG | 0.637551 | 8.2:-81006622 | MS.gene39299:CDS |
| CTGTGCAGGTAGGAAAGGGA+GGG | 0.642309 | 8.2:-81004062 | MS.gene39299:intron |
| TTAGAATAGAGATGAATGAG+AGG | 0.646176 | 8.2:+81004745 | None:intergenic |
| AGAGCTGGACATAAGTTGGA+AGG | 0.646595 | 8.2:-81006474 | MS.gene39299:CDS |
| TGGTGCATCACATGTTTATG+GGG | 0.650359 | 8.2:-81006358 | MS.gene39299:CDS |
| ACAACAGATTTGTCAGACAC+AGG | 0.652858 | 8.2:+81006624 | None:intergenic |
| AGATCCTGCTGTCCATCAGG+AGG | 0.669854 | 8.2:-81004031 | MS.gene39299:intron |
| GGTCAAATACCAGTTAGAAG+AGG | 0.671355 | 8.2:-81008591 | MS.gene39299:CDS |
| GTGAAGCAGAACCAGTTACG+AGG | 0.675728 | 8.2:-81008881 | MS.gene39299:CDS |
| TTCACCAGAATCCATAACAA+AGG | 0.678336 | 8.2:-81003562 | MS.gene39299:CDS |
| AACGTGTATCTATTATAGAG+CGG | 0.683766 | 8.2:-81004824 | MS.gene39299:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATATTATTTAGATAAA+TGG | + | chr8.2:81007449-81007468 | None:intergenic | 10.0% |
| !! | ATTAAATACACATATAAAAT+AGG | + | chr8.2:81006800-81006819 | None:intergenic | 10.0% |
| !! | CAAATAATAATATTTATTGT+AGG | + | chr8.2:81003677-81003696 | None:intergenic | 10.0% |
| !! | TATTGATAAAATTGATAAAA+TGG | + | chr8.2:81004015-81004034 | None:intergenic | 10.0% |
| !! | TTAAATACACATATAAAATA+GGG | + | chr8.2:81006799-81006818 | None:intergenic | 10.0% |
| !!! | TTATGGTTTTAAATTTTAAT+TGG | - | chr8.2:81004305-81004324 | MS.gene39299:intron | 10.0% |
| !! | AAAATGAATAAGATTGTAAA+TGG | + | chr8.2:81007838-81007857 | None:intergenic | 15.0% |
| !! | ATAAGTTAGTATTACTAATT+AGG | - | chr8.2:81006840-81006859 | MS.gene39299:intron | 15.0% |
| !! | ATCATATCATTTATATACTT+TGG | - | chr8.2:81007419-81007438 | MS.gene39299:intron | 15.0% |
| !! | TAAAAAACATATCAATAAAC+TGG | + | chr8.2:81004535-81004554 | None:intergenic | 15.0% |
| !! | TAAGTTAGTATTACTAATTA+GGG | - | chr8.2:81006841-81006860 | MS.gene39299:intron | 15.0% |
| !! | TAATGATTGTTAACTTAAAT+AGG | - | chr8.2:81007550-81007569 | MS.gene39299:intron | 15.0% |
| !! | TTAGTAATATTTACACAAAA+TGG | + | chr8.2:81006772-81006791 | None:intergenic | 15.0% |
| !! | TTTCTTAATATTTGTGAATT+TGG | + | chr8.2:81006726-81006745 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTTTTACCTCA+GGG | - | chr8.2:81004497-81004516 | MS.gene39299:intron | 15.0% |
| !!! | TAAACATTGCTTAATTTTTT+CGG | - | chr8.2:81006115-81006134 | MS.gene39299:intron | 15.0% |
| !!! | TAACATATTTCATGTTTTAA+TGG | - | chr8.2:81007233-81007252 | MS.gene39299:intron | 15.0% |
| !!! | TAATATTGTTTTAGAAGATT+TGG | - | chr8.2:81007495-81007514 | MS.gene39299:CDS | 15.0% |
| !!! | TATTCTTATATTCTTTTAAC+AGG | - | chr8.2:81008019-81008038 | MS.gene39299:intron | 15.0% |
| !!! | TTAGTAATACTAACTTATTT+TGG | + | chr8.2:81006838-81006857 | None:intergenic | 15.0% |
| !!! | TTTACAATCTTATTCATTTT+TGG | - | chr8.2:81007838-81007857 | MS.gene39299:intron | 15.0% |
| !! | AATAATTAATAGCCACATAA+TGG | + | chr8.2:81006568-81006587 | None:intergenic | 20.0% |
| !! | AATCTAATAAAGAAAAGCTA+AGG | + | chr8.2:81006471-81006490 | None:intergenic | 20.0% |
| !! | ATAACACAATTCAAAATACT+AGG | - | chr8.2:81005525-81005544 | MS.gene39299:intron | 20.0% |
| !! | ATTTAGCTGTATATTATTAC+TGG | + | chr8.2:81008181-81008200 | None:intergenic | 20.0% |
| !! | CAAACTATCATTTCTAAATT+TGG | - | chr8.2:81008325-81008344 | MS.gene39299:intron | 20.0% |
| !! | CCAATAAATAAAATCAAGAA+TGG | + | chr8.2:81004342-81004361 | None:intergenic | 20.0% |
| !! | CGTTTAAACACAAAAAAAAA+AGG | + | chr8.2:81006276-81006295 | None:intergenic | 20.0% |
| !! | GTTCAAATTAAATGCTTTAA+GGG | - | chr8.2:81004567-81004586 | MS.gene39299:intron | 20.0% |
| !! | TAAATGATATGATCAATGAA+CGG | + | chr8.2:81007412-81007431 | None:intergenic | 20.0% |
| !! | TAACTTATGTGAAATAATGA+TGG | + | chr8.2:81006209-81006228 | None:intergenic | 20.0% |
| !! | TAATAAATGTGTAGCTTAAT+TGG | + | chr8.2:81006249-81006268 | None:intergenic | 20.0% |
| !! | TACTTGAAATAATATCTCAA+CGG | - | chr8.2:81005877-81005896 | MS.gene39299:intron | 20.0% |
| !! | TATTCTCTTAAAGGAAAAAA+AGG | - | chr8.2:81004698-81004717 | MS.gene39299:intron | 20.0% |
| !! | TATTGAGAAAAAAAACAGAA+TGG | + | chr8.2:81003651-81003670 | None:intergenic | 20.0% |
| !! | TCAATATGTTATCATTGAAA+TGG | - | chr8.2:81008213-81008232 | MS.gene39299:intron | 20.0% |
| !! | TCACAAATATTAAGAAAAGT+TGG | - | chr8.2:81006729-81006748 | MS.gene39299:intron | 20.0% |
| !! | TCACATAAGTTATTAACAAT+TGG | - | chr8.2:81006217-81006236 | MS.gene39299:intron | 20.0% |
| !! | TCTAATTAAGAAAAGATAAC+AGG | + | chr8.2:81007104-81007123 | None:intergenic | 20.0% |
| !! | TCTATTTGATAAAACTTACA+TGG | - | chr8.2:81007303-81007322 | MS.gene39299:intron | 20.0% |
| !! | TGTTCAAATTAAATGCTTTA+AGG | - | chr8.2:81004566-81004585 | MS.gene39299:intron | 20.0% |
| !! | TTATTTAGTACAAGTAATAG+TGG | + | chr8.2:81004105-81004124 | None:intergenic | 20.0% |
| !! | TTTGTTTAGGGATTATATTT+AGG | - | chr8.2:81006899-81006918 | MS.gene39299:intron | 20.0% |
| !!! | AAAAAAGGAAGTTCAATTTT+AGG | - | chr8.2:81004713-81004732 | MS.gene39299:intron | 20.0% |
| !!! | AACTTGTTCAAAAAATCATT+TGG | - | chr8.2:81008452-81008471 | MS.gene39299:intron | 20.0% |
| !!! | AAGCATTTTTTCAACTTAAT+TGG | + | chr8.2:81008615-81008634 | None:intergenic | 20.0% |
| !!! | AATATTTAGTTGATACAAAC+AGG | + | chr8.2:81008003-81008022 | None:intergenic | 20.0% |
| !!! | ATTTCATGTTTTAATGGTTA+AGG | - | chr8.2:81007239-81007258 | MS.gene39299:intron | 20.0% |
| !!! | CAATAATGGAAAAATTACAT+AGG | + | chr8.2:81003957-81003976 | None:intergenic | 20.0% |
| !!! | CCATTCTTGATTTTATTTAT+TGG | - | chr8.2:81004339-81004358 | MS.gene39299:CDS | 20.0% |
| !!! | CTTGAGTAAATTGATTTTTA+TGG | - | chr8.2:81005401-81005420 | MS.gene39299:intron | 20.0% |
| !!! | GATTTTTTTTTTTTTACCTC+AGG | - | chr8.2:81004496-81004515 | MS.gene39299:intron | 20.0% |
| !!! | TGGTGTTTTTTTTTTTTTCA+TGG | - | chr8.2:81003780-81003799 | MS.gene39299:intron | 20.0% |
| !!! | TGGTTTTAAATTTTAATTGG+TGG | - | chr8.2:81004308-81004327 | MS.gene39299:intron | 20.0% |
| !!! | TTCAAATTAAATGCTTTAAG+GGG | - | chr8.2:81004568-81004587 | MS.gene39299:intron | 20.0% |
| !!! | TTTCATGTTTTAATGGTTAA+GGG | - | chr8.2:81007240-81007259 | MS.gene39299:intron | 20.0% |
| !!! | TTTTACAATTGGTTATTAAG+TGG | - | chr8.2:81007899-81007918 | MS.gene39299:intron | 20.0% |
| ! | AATATTTGTGAATTTGGTCA+AGG | + | chr8.2:81006720-81006739 | None:intergenic | 25.0% |
| ! | AATGCACTCGTAAAAAATTA+TGG | - | chr8.2:81004288-81004307 | MS.gene39299:intron | 25.0% |
| ! | ACTATACACATACATACAAA+TGG | + | chr8.2:81005627-81005646 | None:intergenic | 25.0% |
| ! | ACTATCAAAGGAGAAATTTA+TGG | + | chr8.2:81007069-81007088 | None:intergenic | 25.0% |
| ! | AGTATATGACTATGTTTAAC+CGG | + | chr8.2:81007718-81007737 | None:intergenic | 25.0% |
| ! | AGTATCCAAAAAACTATCAA+AGG | + | chr8.2:81007081-81007100 | None:intergenic | 25.0% |
| ! | ATAGTGTCTACATACTAATT+TGG | + | chr8.2:81005015-81005034 | None:intergenic | 25.0% |
| ! | ATATTTGTGAATTTGGTCAA+GGG | + | chr8.2:81006719-81006738 | None:intergenic | 25.0% |
| ! | ATCTTCAAAAATCAACGTTA+AGG | - | chr8.2:81005482-81005501 | MS.gene39299:intron | 25.0% |
| ! | ATGATAACATATTGACAAGT+AGG | + | chr8.2:81008208-81008227 | None:intergenic | 25.0% |
| ! | CAATATTAAACAGACTCATT+AGG | + | chr8.2:81007483-81007502 | None:intergenic | 25.0% |
| ! | CTATTGGCAAATAATAGTAA+TGG | - | chr8.2:81005276-81005295 | MS.gene39299:intron | 25.0% |
| ! | GATGAAAATGCATTATTGTT+TGG | - | chr8.2:81005907-81005926 | MS.gene39299:intron | 25.0% |
| ! | GATGTTTGTGAAAATTGAAT+TGG | - | chr8.2:81007787-81007806 | MS.gene39299:intron | 25.0% |
| ! | GCATTTAACTAGTACATTAA+GGG | - | chr8.2:81004660-81004679 | MS.gene39299:intron | 25.0% |
| ! | TAACAAGGAAAAGAAAGTTA+AGG | + | chr8.2:81003583-81003602 | None:intergenic | 25.0% |
| ! | TAATCCCTAAACAAATTACT+AGG | + | chr8.2:81006894-81006913 | None:intergenic | 25.0% |
| ! | TAGCTGTATGTAATCATTTA+TGG | - | chr8.2:81005589-81005608 | MS.gene39299:intron | 25.0% |
| ! | TATTTGCATTTGCAACAATA+AGG | + | chr8.2:81007153-81007172 | None:intergenic | 25.0% |
| ! | TGTTAATTCAGAAACAAAAG+AGG | + | chr8.2:81005246-81005265 | None:intergenic | 25.0% |
| ! | TTACTAATTAGGGTTATGTT+TGG | - | chr8.2:81006851-81006870 | MS.gene39299:intron | 25.0% |
| ! | TTGAATTGAAACATTGTTGT+TGG | - | chr8.2:81003760-81003779 | MS.gene39299:intron | 25.0% |
| !! | ATCAGCAATTTTCTTTCAAA+GGG | + | chr8.2:81004845-81004864 | None:intergenic | 25.0% |
| !! | ATTTTTATGGATATGAAGTC+TGG | - | chr8.2:81005414-81005433 | MS.gene39299:intron | 25.0% |
| !! | CAAATTCAGTGTTTTACAAT+TGG | - | chr8.2:81007888-81007907 | MS.gene39299:intron | 25.0% |
| !! | TAATTTTACAGAGATCGTTT+TGG | - | chr8.2:81004594-81004613 | MS.gene39299:intron | 25.0% |
| !! | TATCAGCAATTTTCTTTCAA+AGG | + | chr8.2:81004846-81004865 | None:intergenic | 25.0% |
| !! | TATTTCAAGTAAACAGAGAT+TGG | + | chr8.2:81005868-81005887 | None:intergenic | 25.0% |
| !! | TTACGTACTTTTCCTTTTAT+TGG | - | chr8.2:81006305-81006324 | MS.gene39299:intron | 25.0% |
| !! | TTTCATTGTCGTTTAACTAT+TGG | - | chr8.2:81005115-81005134 | MS.gene39299:intron | 25.0% |
| !! | TTTCCTTTTATTGGCAAATA+TGG | - | chr8.2:81006314-81006333 | MS.gene39299:intron | 25.0% |
| !! | TTTTTGCGTTATTCTCTTAA+AGG | - | chr8.2:81004689-81004708 | MS.gene39299:intron | 25.0% |
| !!! | ACAACGTTGACTTATAATTA+GGG | - | chr8.2:81008531-81008550 | MS.gene39299:intron | 25.0% |
| !!! | AGCATATGACTTTTTTTCAA+AGG | - | chr8.2:81006922-81006941 | MS.gene39299:intron | 25.0% |
| !!! | AGTTTGTTCAAATTTTGCTA+CGG | - | chr8.2:81004055-81004074 | MS.gene39299:CDS | 25.0% |
| !!! | CATGTTTTGAATACTTAAGA+TGG | - | chr8.2:81006513-81006532 | MS.gene39299:intron | 25.0% |
| !!! | GAAATTGATTTTAGTGAGAT+GGG | - | chr8.2:81003802-81003821 | MS.gene39299:intron | 25.0% |
| !!! | GATTTTATTTATTGGCTTTG+TGG | - | chr8.2:81004347-81004366 | MS.gene39299:CDS | 25.0% |
| !!! | GCATATGACTTTTTTTCAAA+GGG | - | chr8.2:81006923-81006942 | MS.gene39299:intron | 25.0% |
| !!! | TACAACGTTGACTTATAATT+AGG | - | chr8.2:81008530-81008549 | MS.gene39299:intron | 25.0% |
| !!! | TTCATGTTTTAATGGTTAAG+GGG | - | chr8.2:81007241-81007260 | MS.gene39299:intron | 25.0% |
| !!! | TTCTTTTTTGACGTTAGAAA+AGG | - | chr8.2:81005315-81005334 | MS.gene39299:intron | 25.0% |
| !!! | TTTCTCCTTTGATAGTTTTT+TGG | - | chr8.2:81007073-81007092 | MS.gene39299:intron | 25.0% |
| AAACTAAGTTTAAGCCTCTA+AGG | + | chr8.2:81006385-81006404 | None:intergenic | 30.0% | |
| AACGTGTATCTATTATAGAG+CGG | - | chr8.2:81007597-81007616 | MS.gene39299:intron | 30.0% | |
| AAGTTCCCAAATATGTATGT+AGG | - | chr8.2:81005834-81005853 | MS.gene39299:intron | 30.0% | |
| ACAAGTAATAGTGGCTATTA+CGG | + | chr8.2:81004096-81004115 | None:intergenic | 30.0% | |
| ACTTCACCTACATACATATT+TGG | + | chr8.2:81005843-81005862 | None:intergenic | 30.0% | |
| AGAAACAAAAGAGGATACAA+GGG | + | chr8.2:81005237-81005256 | None:intergenic | 30.0% | |
| AGAACACACGTATTTAACAT+GGG | - | chr8.2:81004768-81004787 | MS.gene39299:CDS | 30.0% | |
| AGATACTTAATGATGAGCTT+TGG | + | chr8.2:81003929-81003948 | None:intergenic | 30.0% | |
| AGCTTATAATAAGGGACATA+GGG | + | chr8.2:81006696-81006715 | None:intergenic | 30.0% | |
| ATGAAAGCTTACTTCTTGAT+TGG | + | chr8.2:81003899-81003918 | None:intergenic | 30.0% | |
| ATTGACAACATATGTAATGC+AGG | - | chr8.2:81005731-81005750 | MS.gene39299:intron | 30.0% | |
| CAACCATATTTGCCAATAAA+AGG | + | chr8.2:81006320-81006339 | None:intergenic | 30.0% | |
| CAATTTCTTTGCATATCAAC+AGG | + | chr8.2:81005070-81005089 | None:intergenic | 30.0% | |
| CTCATTCATCTCTATTCTAA+CGG | - | chr8.2:81007679-81007698 | MS.gene39299:intron | 30.0% | |
| CTGTTGATATGCAAAGAAAT+TGG | - | chr8.2:81005068-81005087 | MS.gene39299:intron | 30.0% | |
| CTTATGTGAAATAATGATGG+TGG | + | chr8.2:81006206-81006225 | None:intergenic | 30.0% | |
| CTTCACCTACATACATATTT+GGG | + | chr8.2:81005842-81005861 | None:intergenic | 30.0% | |
| GCAAAATGGTGCTTATTAAA+AGG | + | chr8.2:81008506-81008525 | None:intergenic | 30.0% | |
| GGCATTTAACTAGTACATTA+AGG | - | chr8.2:81004659-81004678 | MS.gene39299:intron | 30.0% | |
| TAAGAGAAAAAGTTGAAGAC+AGG | + | chr8.2:81008587-81008606 | None:intergenic | 30.0% | |
| TACATACAAATGGAGTGTAT+TGG | + | chr8.2:81005617-81005636 | None:intergenic | 30.0% | |
| TGTATTGCTGATATTGTTCA+AGG | + | chr8.2:81004935-81004954 | None:intergenic | 30.0% | |
| TGTTATCATTGAAATGGAGT+TGG | - | chr8.2:81008219-81008238 | MS.gene39299:intron | 30.0% | |
| TGTTTATGTGTGGAATGATT+AGG | - | chr8.2:81006345-81006364 | MS.gene39299:CDS | 30.0% | |
| TTAGAATAGAGATGAATGAG+AGG | + | chr8.2:81007679-81007698 | None:intergenic | 30.0% | |
| TTCAAATTGTGGTTTAACCA+AGG | + | chr8.2:81008093-81008112 | None:intergenic | 30.0% | |
| ! | AAAAAAGAGAGAGTACAATC+AGG | + | chr8.2:81005169-81005188 | None:intergenic | 30.0% |
| ! | ATGGATGCTTTATGAGTTTT+GGG | - | chr8.2:81006532-81006551 | MS.gene39299:intron | 30.0% |
| ! | ATTAATAGCCACATAATGGA+TGG | + | chr8.2:81006564-81006583 | None:intergenic | 30.0% |
| ! | ATTTGCAACAATAAGGTGTT+TGG | + | chr8.2:81007146-81007165 | None:intergenic | 30.0% |
| ! | CAGGAAAAGTATATGTGAAT+GGG | - | chr8.2:81005750-81005769 | MS.gene39299:intron | 30.0% |
| ! | GTTCTGCATTTTATTGTTGA+AGG | - | chr8.2:81004447-81004466 | MS.gene39299:intron | 30.0% |
| ! | TCACCAAATCAACATTTTGT+GGG | + | chr8.2:81007649-81007668 | None:intergenic | 30.0% |
| ! | TGTCCTTTTATGCTTTTCTT+CGG | - | chr8.2:81006439-81006458 | MS.gene39299:CDS | 30.0% |
| ! | TTAAACCACAATTTGAAGCT+CGG | - | chr8.2:81008096-81008115 | MS.gene39299:intron | 30.0% |
| ! | TTTTTCCATTATTGCATCGT+TGG | - | chr8.2:81003963-81003982 | MS.gene39299:intron | 30.0% |
| !! | ATGCACCTAGTAATTTGTTT+AGG | - | chr8.2:81006886-81006905 | MS.gene39299:intron | 30.0% |
| !! | GATCGTTTTGGACATATTTA+AGG | - | chr8.2:81004606-81004625 | MS.gene39299:intron | 30.0% |
| !! | GGAAATTGATTTTAGTGAGA+TGG | - | chr8.2:81003801-81003820 | MS.gene39299:intron | 30.0% |
| !! | TCAAAGGGTGCTTATAATTA+GGG | - | chr8.2:81006938-81006957 | MS.gene39299:intron | 30.0% |
| !! | TCAATAAACTGGCTTGTTTA+AGG | + | chr8.2:81004524-81004543 | None:intergenic | 30.0% |
| !! | TGCACCTAGTAATTTGTTTA+GGG | - | chr8.2:81006887-81006906 | MS.gene39299:intron | 30.0% |
| !! | TTCAAAGGGTGCTTATAATT+AGG | - | chr8.2:81006937-81006956 | MS.gene39299:intron | 30.0% |
| !!! | CTATTGGTTTTCTATTTGTG+AGG | - | chr8.2:81005131-81005150 | MS.gene39299:intron | 30.0% |
| !!! | TCATGTTTTAATGGTTAAGG+GGG | - | chr8.2:81007242-81007261 | MS.gene39299:intron | 30.0% |
| AACTAGAGAACGTTAATGAG+AGG | - | chr8.2:81007941-81007960 | MS.gene39299:intron | 35.0% | |
| AAGGAATTCTGTATTACCCT+CGG | + | chr8.2:81008833-81008852 | None:intergenic | 35.0% | |
| AATGCTTCACACTTTGTATG+AGG | - | chr8.2:81008628-81008647 | MS.gene39299:intron | 35.0% | |
| ACATGGTATCTTCACTAACA+CGG | - | chr8.2:81004212-81004231 | MS.gene39299:intron | 35.0% | |
| AGATTATCCTACAAAGGGTT+TGG | - | chr8.2:81008684-81008703 | MS.gene39299:intron | 35.0% | |
| ATACAGCTAGAAGAGAATCA+TGG | + | chr8.2:81005578-81005597 | None:intergenic | 35.0% | |
| ATCTTCAGAGTAGTAGTCTT+CGG | - | chr8.2:81006603-81006622 | MS.gene39299:CDS | 35.0% | |
| ATGCTTCACACTTTGTATGA+GGG | - | chr8.2:81008629-81008648 | MS.gene39299:intron | 35.0% | |
| ATGGTGCATCACATGTTTAT+GGG | - | chr8.2:81006062-81006081 | MS.gene39299:intron | 35.0% | |
| CAGAAACAAAAGAGGATACA+AGG | + | chr8.2:81005238-81005257 | None:intergenic | 35.0% | |
| CATTGAAATGTAATCTGCAG+AGG | - | chr8.2:81007341-81007360 | MS.gene39299:intron | 35.0% | |
| CTCTCAGATTATCCTACAAA+GGG | - | chr8.2:81008679-81008698 | MS.gene39299:intron | 35.0% | |
| CTGAAGATAGCTGATACAAT+GGG | + | chr8.2:81006591-81006610 | None:intergenic | 35.0% | |
| GAACACACGTATTTAACATG+GGG | - | chr8.2:81004769-81004788 | MS.gene39299:CDS | 35.0% | |
| GAATAGACATAAGAAGAGTC+TGG | + | chr8.2:81005679-81005698 | None:intergenic | 35.0% | |
| GAGAACACACGTATTTAACA+TGG | - | chr8.2:81004767-81004786 | MS.gene39299:CDS | 35.0% | |
| GAGCTTATAATAAGGGACAT+AGG | + | chr8.2:81006697-81006716 | None:intergenic | 35.0% | |
| GAGTCATGAAGAAATTAGAG+AGG | - | chr8.2:81008888-81008907 | MS.gene39299:CDS | 35.0% | |
| GCATAAAAGGACAGCATAAA+AGG | + | chr8.2:81006432-81006451 | None:intergenic | 35.0% | |
| GTAGTGGTAACAATATGTCA+TGG | - | chr8.2:81004369-81004388 | MS.gene39299:CDS | 35.0% | |
| GTCAAGGGAGCTTATAATAA+GGG | + | chr8.2:81006704-81006723 | None:intergenic | 35.0% | |
| GTGCTTATTAAAAGGAACAG+AGG | + | chr8.2:81008498-81008517 | None:intergenic | 35.0% | |
| GTGGATGACTAATTAGTAGA+AGG | + | chr8.2:81004818-81004837 | None:intergenic | 35.0% | |
| GTTCTCGAGAAGATTACAAA+AGG | - | chr8.2:81008751-81008770 | MS.gene39299:intron | 35.0% | |
| GTTCTCTAGTTGCTTAAGAA+GGG | + | chr8.2:81007932-81007951 | None:intergenic | 35.0% | |
| TAACGGTACGATCTTTAATC+CGG | - | chr8.2:81007696-81007715 | MS.gene39299:intron | 35.0% | |
| TATGGTGCATCACATGTTTA+TGG | - | chr8.2:81006061-81006080 | MS.gene39299:intron | 35.0% | |
| TCTGAAGATAGCTGATACAA+TGG | + | chr8.2:81006592-81006611 | None:intergenic | 35.0% | |
| TGACAACAAACAAGAAGTTC+AGG | + | chr8.2:81008433-81008452 | None:intergenic | 35.0% | |
| TGACTTATAATTAGGGACAG+AGG | - | chr8.2:81008538-81008557 | MS.gene39299:CDS | 35.0% | |
| TGCTGTGGTAAATGTTATGA+AGG | - | chr8.2:81008049-81008068 | MS.gene39299:intron | 35.0% | |
| TGTAGCTCAAAGACAACAAT+CGG | + | chr8.2:81006495-81006514 | None:intergenic | 35.0% | |
| TTAACAATGCTAGCTGCTAT+TGG | - | chr8.2:81005260-81005279 | MS.gene39299:intron | 35.0% | |
| TTCACCAGAATCCATAACAA+AGG | - | chr8.2:81008859-81008878 | MS.gene39299:CDS | 35.0% | |
| TTCATAACATTTACCACAGC+AGG | + | chr8.2:81008050-81008069 | None:intergenic | 35.0% | |
| TTGACAACACTACATCTACA+TGG | - | chr8.2:81004195-81004214 | MS.gene39299:intron | 35.0% | |
| ! | AAGCCGAAGAAAAGCATAAA+AGG | + | chr8.2:81006445-81006464 | None:intergenic | 35.0% |
| ! | AAGTTTTCCAAACCCTTTGT+AGG | + | chr8.2:81008694-81008713 | None:intergenic | 35.0% |
| ! | ACAAAAGGAGTAGAGAGTTT+TGG | - | chr8.2:81008766-81008785 | MS.gene39299:intron | 35.0% |
| ! | ACTTTCTGAAGACTTTCTTC+TGG | - | chr8.2:81006644-81006663 | MS.gene39299:CDS | 35.0% |
| ! | AGAAGGAACAAGTTGAATGA+TGG | + | chr8.2:81004801-81004820 | None:intergenic | 35.0% |
| ! | ATATTTAAGGCCTAATGCAG+AGG | - | chr8.2:81004619-81004638 | MS.gene39299:intron | 35.0% |
| ! | CAATTTTCTTTCAAAGGGAG+TGG | + | chr8.2:81004840-81004859 | None:intergenic | 35.0% |
| ! | CACGGTGAAGCAAATTATTT+TGG | - | chr8.2:81004230-81004249 | MS.gene39299:intron | 35.0% |
| ! | GAGATTGATTTCTGCAATTC+AGG | - | chr8.2:81008729-81008748 | MS.gene39299:intron | 35.0% |
| ! | GAGTTTAAGGTTTCGTAACA+AGG | + | chr8.2:81003598-81003617 | None:intergenic | 35.0% |
| ! | GATGGATGCTTTATGAGTTT+TGG | - | chr8.2:81006531-81006550 | MS.gene39299:intron | 35.0% |
| ! | GCAGGAAAAGTATATGTGAA+TGG | - | chr8.2:81005749-81005768 | MS.gene39299:intron | 35.0% |
| ! | GGGAAGAGAATATTTAAAGC+CGG | - | chr8.2:81005770-81005789 | MS.gene39299:intron | 35.0% |
| ! | GTCACCAAATCAACATTTTG+TGG | + | chr8.2:81007650-81007669 | None:intergenic | 35.0% |
| ! | TCAAGCCTCTTTTTCCTAAA+AGG | + | chr8.2:81004903-81004922 | None:intergenic | 35.0% |
| ! | TCTCCCACAAAATGTTGATT+TGG | - | chr8.2:81007643-81007662 | MS.gene39299:intron | 35.0% |
| ! | TGCATTTTATTGTTGAAGGC+TGG | - | chr8.2:81004451-81004470 | MS.gene39299:intron | 35.0% |
| ! | TTTTTATATCGACACAGAGC+TGG | - | chr8.2:81005932-81005951 | MS.gene39299:intron | 35.0% |
| ! | TTTTTGTGCATTCGCCTTTT+AGG | - | chr8.2:81004886-81004905 | MS.gene39299:intron | 35.0% |
| !! | ATGTGAAATAATGATGGTGG+AGG | + | chr8.2:81006203-81006222 | None:intergenic | 35.0% |
| !! | ATTCGCCTTTTAGGAAAAAG+AGG | - | chr8.2:81004895-81004914 | MS.gene39299:intron | 35.0% |
| !! | ATTTATTGGCTTTGTGGTAG+TGG | - | chr8.2:81004353-81004372 | MS.gene39299:CDS | 35.0% |
| !! | GATAGTTTGTTTCCAGCAAA+CGG | + | chr8.2:81008314-81008333 | None:intergenic | 35.0% |
| !! | TATTCTATTTCTGTGCAAGC+AGG | - | chr8.2:81008253-81008272 | MS.gene39299:intron | 35.0% |
| !! | TGGACTAGTCCTGTTTAAAT+TGG | + | chr8.2:81007818-81007837 | None:intergenic | 35.0% |
| !!! | CTTAATTTTTTCGGCTACTC+TGG | - | chr8.2:81006124-81006143 | MS.gene39299:intron | 35.0% |
| !!! | TGCTTTTGGTGTTTTAAGCA+AGG | - | chr8.2:81008656-81008675 | MS.gene39299:intron | 35.0% |
| AAGGAGGGACAAAGGTTATT+TGG | - | chr8.2:81006165-81006184 | MS.gene39299:intron | 40.0% | |
| AATATAACCAAAGCGAGCTC+AGG | + | chr8.2:81005038-81005057 | None:intergenic | 40.0% | |
| ACAACAGATTTGTCAGACAC+AGG | + | chr8.2:81005800-81005819 | None:intergenic | 40.0% | |
| ACGTTAAGGCTATAAGCTTG+AGG | - | chr8.2:81005496-81005515 | MS.gene39299:intron | 40.0% | |
| ACTGACTGCTTACTTCAGTA+TGG | - | chr8.2:81006043-81006062 | MS.gene39299:intron | 40.0% | |
| AGACATAAGAAGAGTCTGGA+AGG | + | chr8.2:81005675-81005694 | None:intergenic | 40.0% | |
| AGAGATGAATGAGAGGTCTA+AGG | + | chr8.2:81007672-81007691 | None:intergenic | 40.0% | |
| AGGAGGGACAAAGGTTATTT+GGG | - | chr8.2:81006166-81006185 | MS.gene39299:intron | 40.0% | |
| AGTAGTCTTCGGCATGATTT+GGG | - | chr8.2:81006614-81006633 | MS.gene39299:CDS | 40.0% | |
| CAAAATCCATGACTGGATGA+TGG | + | chr8.2:81004964-81004983 | None:intergenic | 40.0% | |
| CAGTGTAATTCCTCTGCATT+AGG | + | chr8.2:81004632-81004651 | None:intergenic | 40.0% | |
| CGTTCTCTAGTTGCTTAAGA+AGG | + | chr8.2:81007933-81007952 | None:intergenic | 40.0% | |
| CTAGTCCTGTTTAAATTGGC+AGG | + | chr8.2:81007814-81007833 | None:intergenic | 40.0% | |
| GCTCTCAGATTATCCTACAA+AGG | - | chr8.2:81008678-81008697 | MS.gene39299:intron | 40.0% | |
| GGTCAAATACCAGTTAGAAG+AGG | - | chr8.2:81003830-81003849 | MS.gene39299:intron | 40.0% | |
| GGTCAAGGGAGCTTATAATA+AGG | + | chr8.2:81006705-81006724 | None:intergenic | 40.0% | |
| GTAAAGTGGCTCTTGATTCT+GGG | - | chr8.2:81006002-81006021 | MS.gene39299:intron | 40.0% | |
| GTATTGTTAATCCTGCGAGT+AGG | - | chr8.2:81006974-81006993 | MS.gene39299:intron | 40.0% | |
| GTCGAATCAGAATGACATGA+TGG | - | chr8.2:81003985-81004004 | MS.gene39299:intron | 40.0% | |
| TACCTTGCAAAATCCATGAC+TGG | + | chr8.2:81004971-81004990 | None:intergenic | 40.0% | |
| TAGTAGTCTTCGGCATGATT+TGG | - | chr8.2:81006613-81006632 | MS.gene39299:CDS | 40.0% | |
| TCATGTGTTATGCACAGATC+AGG | + | chr8.2:81007765-81007784 | None:intergenic | 40.0% | |
| TGCAGTAGCATAGCTTCTAA+AGG | + | chr8.2:81003858-81003877 | None:intergenic | 40.0% | |
| TGCTTATAATTAGGGACGGA+GGG | - | chr8.2:81006946-81006965 | MS.gene39299:intron | 40.0% | |
| TGGTGCATCACATGTTTATG+GGG | - | chr8.2:81006063-81006082 | MS.gene39299:intron | 40.0% | |
| TGTGTCTGACAAATCTGTTG+TGG | - | chr8.2:81005799-81005818 | MS.gene39299:intron | 40.0% | |
| TGTTGATGTTGCTGGTAAAG+TGG | - | chr8.2:81005988-81006007 | MS.gene39299:intron | 40.0% | |
| TTACGAAACCTTAAACTCCC+AGG | - | chr8.2:81003600-81003619 | MS.gene39299:CDS | 40.0% | |
| TTCGACCAACGATGCAATAA+TGG | + | chr8.2:81003971-81003990 | None:intergenic | 40.0% | |
| TTGGACCTGCCAATTTAAAC+AGG | - | chr8.2:81007806-81007825 | MS.gene39299:intron | 40.0% | |
| ! | AGCACCTTTGTTATGGATTC+TGG | + | chr8.2:81008866-81008885 | None:intergenic | 40.0% |
| ! | AGGGTGCTTATAATTAGGGA+CGG | - | chr8.2:81006942-81006961 | MS.gene39299:intron | 40.0% |
| ! | ATCCAGTCATGGATTTTGCA+AGG | - | chr8.2:81004966-81004985 | MS.gene39299:intron | 40.0% |
| ! | GACAAAGGTTATTTGGGGTA+GGG | - | chr8.2:81006172-81006191 | MS.gene39299:intron | 40.0% |
| ! | TGTATGAGGGTTTCTGCTTT+TGG | - | chr8.2:81008642-81008661 | MS.gene39299:intron | 40.0% |
| ! | TGTCATGGTAGTAGTGCTTT+TGG | - | chr8.2:81004384-81004403 | MS.gene39299:intron | 40.0% |
| ! | TTTTCTTTCAAAGGGAGTGG+TGG | + | chr8.2:81004837-81004856 | None:intergenic | 40.0% |
| !! | AATAGCCACATAATGGATGG+CGG | + | chr8.2:81006561-81006580 | None:intergenic | 40.0% |
| !! | ATAGACCATATCGATTCAGC+AGG | + | chr8.2:81007288-81007307 | None:intergenic | 40.0% |
| !! | ATTTTAGTGAGATGGGTGAG+TGG | - | chr8.2:81003809-81003828 | MS.gene39299:intron | 40.0% |
| !! | CATGTTTATGGGGTTGATGT+AGG | - | chr8.2:81006073-81006092 | MS.gene39299:intron | 40.0% |
| !! | GGTTGCTTGTTGTTTATGTG+TGG | - | chr8.2:81006335-81006354 | MS.gene39299:intron | 40.0% |
| !! | TATGGGGTTGATGTAGGTTA+TGG | - | chr8.2:81006079-81006098 | MS.gene39299:intron | 40.0% |
| !!! | AGTTTTGGTTTCTGCAGCAA+AGG | - | chr8.2:81008781-81008800 | MS.gene39299:intron | 40.0% |
| AACCTGTTCCTGGGAGTTTA+AGG | + | chr8.2:81003611-81003630 | None:intergenic | 45.0% | |
| AACCTTAAACTCCCAGGAAC+AGG | - | chr8.2:81003606-81003625 | MS.gene39299:CDS | 45.0% | |
| AAGCTCGGAGATCTCAAGTA+AGG | - | chr8.2:81008111-81008130 | MS.gene39299:intron | 45.0% | |
| ACACAGAGCTGGACATAAGT+TGG | - | chr8.2:81005943-81005962 | MS.gene39299:intron | 45.0% | |
| ACCTACAGGAGCTAGAGTAT+TGG | - | chr8.2:81005375-81005394 | MS.gene39299:intron | 45.0% | |
| AGAGATCATGATCTAGCCTG+TGG | - | chr8.2:81005340-81005359 | MS.gene39299:intron | 45.0% | |
| AGATCATGATCTAGCCTGTG+GGG | - | chr8.2:81005342-81005361 | MS.gene39299:intron | 45.0% | |
| AGATGCTGCATTAGTGACCT+TGG | - | chr8.2:81008073-81008092 | MS.gene39299:intron | 45.0% | |
| ATCATTTCACCTCCGTTTGC+TGG | - | chr8.2:81008299-81008318 | MS.gene39299:intron | 45.0% | |
| ATCTGGTAAAGGAGGGACAA+AGG | - | chr8.2:81006157-81006176 | MS.gene39299:intron | 45.0% | |
| ATTCCATTGTCTGTGCAGGT+AGG | - | chr8.2:81008349-81008368 | MS.gene39299:intron | 45.0% | |
| ATTGTCTGTGCAGGTAGGAA+AGG | - | chr8.2:81008354-81008373 | MS.gene39299:intron | 45.0% | |
| CAACGTTGTAGAGCGCAAAA+TGG | + | chr8.2:81008520-81008539 | None:intergenic | 45.0% | |
| CGCTTTGTAAACCTCGTAAC+TGG | + | chr8.2:81003554-81003573 | None:intergenic | 45.0% | |
| CTCTAGTTGCTTAAGAAGGG+TGG | + | chr8.2:81007929-81007948 | None:intergenic | 45.0% | |
| CTTGATTCTGGGTTGTCAAC+TGG | - | chr8.2:81006013-81006032 | MS.gene39299:intron | 45.0% | |
| GACTCTCAGCACCTTTGTTA+TGG | + | chr8.2:81008873-81008892 | None:intergenic | 45.0% | |
| GACTTCCTGCTGAATCGATA+TGG | - | chr8.2:81007280-81007299 | MS.gene39299:intron | 45.0% | |
| GAGATCATGATCTAGCCTGT+GGG | - | chr8.2:81005341-81005360 | MS.gene39299:intron | 45.0% | |
| GAGGAATTACACTGTGTAGC+AGG | - | chr8.2:81004638-81004657 | MS.gene39299:intron | 45.0% | |
| GATCTCCGAGCTTCAAATTG+TGG | + | chr8.2:81008104-81008123 | None:intergenic | 45.0% | |
| GATGTGCAAGCATCTGGTAA+AGG | - | chr8.2:81006146-81006165 | MS.gene39299:intron | 45.0% | |
| GGAGGGACAAAGGTTATTTG+GGG | - | chr8.2:81006167-81006186 | MS.gene39299:intron | 45.0% | |
| GGATTCTGGTGAAGTGAACA+AGG | + | chr8.2:81008852-81008871 | None:intergenic | 45.0% | |
| GGTAAAGTGGCTCTTGATTC+TGG | - | chr8.2:81006001-81006020 | MS.gene39299:intron | 45.0% | |
| GTAAGAGTTCAGCTACGCAA+TGG | - | chr8.2:81004149-81004168 | MS.gene39299:intron | 45.0% | |
| GTAGATCCATCATCCAGTCA+TGG | - | chr8.2:81004955-81004974 | MS.gene39299:intron | 45.0% | |
| GTGCTTATAATTAGGGACGG+AGG | - | chr8.2:81006945-81006964 | MS.gene39299:intron | 45.0% | |
| TGCAAGCATCTGGTAAAGGA+GGG | - | chr8.2:81006150-81006169 | MS.gene39299:intron | 45.0% | |
| TGGAATTCCATTGTCTGTGC+AGG | - | chr8.2:81008345-81008364 | MS.gene39299:intron | 45.0% | |
| TGGATTGAGTCTCCTCTCAA+AGG | - | chr8.2:81008805-81008824 | MS.gene39299:intron | 45.0% | |
| TTGGTTTCTGCAGCAAAGGT+TGG | - | chr8.2:81008785-81008804 | MS.gene39299:intron | 45.0% | |
| TTGTCTGTGCAGGTAGGAAA+GGG | - | chr8.2:81008355-81008374 | MS.gene39299:intron | 45.0% | |
| TTTCCTACCTGCACAGACAA+TGG | + | chr8.2:81008355-81008374 | None:intergenic | 45.0% | |
| TTTGTCAGACACAGGTGTAC+CGG | + | chr8.2:81005792-81005811 | None:intergenic | 45.0% | |
| ! | AGAGCTGGACATAAGTTGGA+AGG | - | chr8.2:81005947-81005966 | MS.gene39299:intron | 45.0% |
| ! | AGTTTGTTTCCAGCAAACGG+AGG | + | chr8.2:81008311-81008330 | None:intergenic | 45.0% |
| ! | CCTACAGGAGCTAGAGTATT+GGG | - | chr8.2:81005376-81005395 | MS.gene39299:intron | 45.0% |
| ! | CTCTAGCTCCTGTAGGTAAA+AGG | + | chr8.2:81005372-81005391 | None:intergenic | 45.0% |
| ! | GGACAAAGGTTATTTGGGGT+AGG | - | chr8.2:81006171-81006190 | MS.gene39299:intron | 45.0% |
| ! | GGTTGATGTAGGTTATGGAC+AGG | - | chr8.2:81006084-81006103 | MS.gene39299:intron | 45.0% |
| ! | TGGTAGTAGTGCTTTTGGTG+AGG | - | chr8.2:81004389-81004408 | MS.gene39299:intron | 45.0% |
| !! | ATAGCCACATAATGGATGGC+GGG | + | chr8.2:81006560-81006579 | None:intergenic | 45.0% |
| !! | CTAAAGGCACCTCTTCTAAC+TGG | + | chr8.2:81003842-81003861 | None:intergenic | 45.0% |
| !! | CTACAGGAGCTAGAGTATTG+GGG | - | chr8.2:81005377-81005396 | MS.gene39299:intron | 45.0% |
| !! | AAATAATAATATTTATTGTA+GGG | + | chr8.2:81003676-81003695 | None:intergenic | 5.0% |
| AAAAACCACCCACCTCCTGA+TGG | + | chr8.2:81008405-81008424 | None:intergenic | 50.0% | |
| ACACTATCCTGAGCTCGCTT+TGG | - | chr8.2:81005028-81005047 | MS.gene39299:intron | 50.0% | |
| ACTCTGGATGTGCAAGCATC+TGG | - | chr8.2:81006140-81006159 | MS.gene39299:intron | 50.0% | |
| AGAGAGACAGAACCTGTTCC+TGG | + | chr8.2:81003621-81003640 | None:intergenic | 50.0% | |
| ATCAACACCGAGCTGTTCGA+TGG | + | chr8.2:81005975-81005994 | None:intergenic | 50.0% | |
| CACGTGCAGTTATGCCTTAG+AGG | - | chr8.2:81006368-81006387 | MS.gene39299:CDS | 50.0% | |
| GAAAGATCCTGCTGTCCATC+AGG | - | chr8.2:81008387-81008406 | MS.gene39299:intron | 50.0% | |
| GAGAGACAGAACCTGTTCCT+GGG | + | chr8.2:81003620-81003639 | None:intergenic | 50.0% | |
| GATCATGATCTAGCCTGTGG+GGG | - | chr8.2:81005343-81005362 | MS.gene39299:intron | 50.0% | |
| GATTCTGGGTTGTCAACTGG+AGG | - | chr8.2:81006016-81006035 | MS.gene39299:intron | 50.0% | |
| GTGAAGCAGAACCAGTTACG+AGG | - | chr8.2:81003540-81003559 | MS.gene39299:CDS | 50.0% | |
| GTGCAAGCATCTGGTAAAGG+AGG | - | chr8.2:81006149-81006168 | MS.gene39299:intron | 50.0% | |
| GTTAATCCTGCGAGTAGGAC+TGG | - | chr8.2:81006979-81006998 | MS.gene39299:intron | 50.0% | |
| TTAACAGGTCATGCCTGCTG+TGG | - | chr8.2:81008034-81008053 | MS.gene39299:intron | 50.0% | |
| ! | CCCAATACTCTAGCTCCTGT+AGG | + | chr8.2:81005379-81005398 | None:intergenic | 50.0% |
| !! | TGGCTTGTTTAAGGACCCTG+AGG | + | chr8.2:81004515-81004534 | None:intergenic | 50.0% |
| AGACAACCAGTCCTACTCGC+AGG | + | chr8.2:81006988-81007007 | None:intergenic | 55.0% | |
| AGATCCTGCTGTCCATCAGG+AGG | - | chr8.2:81008390-81008409 | MS.gene39299:intron | 55.0% | |
| AGGTAAAAGGATGCCCCCAC+AGG | + | chr8.2:81005359-81005378 | None:intergenic | 55.0% | |
| CTGTGCAGGTAGGAAAGGGA+GGG | - | chr8.2:81008359-81008378 | MS.gene39299:intron | 55.0% | |
| TCTGTGCAGGTAGGAAAGGG+AGG | - | chr8.2:81008358-81008377 | MS.gene39299:intron | 55.0% | |
| TTACCCTCGGCACCTTTGAG+AGG | + | chr8.2:81008820-81008839 | None:intergenic | 55.0% | |
| !! | CAGCTCGGTGTTGATGTTGC+TGG | - | chr8.2:81005980-81005999 | MS.gene39299:intron | 55.0% |
| !! | GAAGGTGCCATCGAACAGCT+CGG | - | chr8.2:81005965-81005984 | MS.gene39299:intron | 55.0% |
| !! | TCTCCTCTCAAAGGTGCCGA+GGG | - | chr8.2:81008814-81008833 | MS.gene39299:intron | 55.0% |
| !!! | GGGGGCATCCTTTTACCTAC+AGG | - | chr8.2:81005361-81005380 | MS.gene39299:intron | 55.0% |
| CCTGCTGTCCATCAGGAGGT+GGG | - | chr8.2:81008394-81008413 | MS.gene39299:intron | 60.0% | |
| GGCACCCGCCATCCATTATG+TGG | - | chr8.2:81006553-81006572 | MS.gene39299:intron | 60.0% | |
| TCCTGCTGTCCATCAGGAGG+TGG | - | chr8.2:81008393-81008412 | MS.gene39299:intron | 60.0% | |
| !! | GTCTCCTCTCAAAGGTGCCG+AGG | - | chr8.2:81008813-81008832 | MS.gene39299:intron | 60.0% |
| GCTGTCCATCAGGAGGTGGG+TGG | - | chr8.2:81008397-81008416 | MS.gene39299:intron | 65.0% | |
| ! | CCCACCTCCTGATGGACAGC+AGG | + | chr8.2:81008397-81008416 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 81003525 | 81008918 | 81003525 | ID=MS.gene39299 |
| chr8.2 | mRNA | 81003525 | 81008918 | 81003525 | ID=MS.gene39299.t1;Parent=MS.gene39299 |
| chr8.2 | exon | 81008816 | 81008918 | 81008816 | ID=MS.gene39299.t1.exon1;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81008816 | 81008918 | 81008816 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81008537 | 81008627 | 81008537 | ID=MS.gene39299.t1.exon2;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81008537 | 81008627 | 81008537 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81007456 | 81007535 | 81007456 | ID=MS.gene39299.t1.exon3;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81007456 | 81007535 | 81007456 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81006588 | 81006690 | 81006588 | ID=MS.gene39299.t1.exon4;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81006588 | 81006690 | 81006588 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81006338 | 81006494 | 81006338 | ID=MS.gene39299.t1.exon5;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81006338 | 81006494 | 81006338 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81004743 | 81004871 | 81004743 | ID=MS.gene39299.t1.exon6;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81004743 | 81004871 | 81004743 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81004316 | 81004402 | 81004316 | ID=MS.gene39299.t1.exon7;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81004316 | 81004402 | 81004316 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81004032 | 81004076 | 81004032 | ID=MS.gene39299.t1.exon8;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81004032 | 81004076 | 81004032 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| chr8.2 | exon | 81003525 | 81003692 | 81003525 | ID=MS.gene39299.t1.exon9;Parent=MS.gene39299.t1 |
| chr8.2 | CDS | 81003525 | 81003692 | 81003525 | ID=cds.MS.gene39299.t1;Parent=MS.gene39299.t1 |
| Gene Sequence |
| Protein sequence |
