Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46058.t1 | XP_013449023.1 | 92.4 | 224 | 17 | 0 | 1 | 224 | 1 | 224 | 4.10E-115 | 424.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46058.t1 | P32110 | 72.4 | 225 | 61 | 1 | 1 | 224 | 1 | 225 | 1.1e-89 | 330.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46058.t1 | A0A072UB35 | 92.4 | 224 | 17 | 0 | 1 | 224 | 1 | 224 | 2.9e-115 | 424.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene46058 | -0.827262 | 1.72E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene46058 | -0.814338 | 1.62E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene46058 | -0.800034 | 1.74E-48 | -1.69E-46 |
| MS.gene049281 | MS.gene46058 | 0.816321 | 5.88E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene46058 | -0.813815 | 2.11E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene46058 | 0.818063 | 2.38E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene46058 | -0.829471 | 5.05E-55 | -1.69E-46 |
| MS.gene049483 | MS.gene46058 | 0.838698 | 2.46E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene46058 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene46058 | -0.822371 | 2.46E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene46058 | -0.813776 | 2.16E-51 | -1.69E-46 |
| MS.gene050129 | MS.gene46058 | 0.814739 | 1.32E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene46058 | -0.826764 | 2.27E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene46058 | -0.819753 | 9.84E-53 | -1.69E-46 |
| MS.gene050353 | MS.gene46058 | 0.813872 | 2.05E-51 | -1.69E-46 |
| MS.gene050354 | MS.gene46058 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene46058 | 0.852532 | 4.34E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene46058 | -0.873559 | 1.34E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene46058 | -0.805693 | 1.18E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene46058 | -0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene46058 | -0.834674 | 2.61E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene46058 | -0.825073 | 5.72E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene46058 | -0.806648 | 7.43E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene46058 | -0.807301 | 5.40E-50 | -1.69E-46 |
| MS.gene050883 | MS.gene46058 | 0.860601 | 1.84E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene46058 | -0.834971 | 2.20E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene46058 | 0.846241 | 2.46E-59 | -1.69E-46 |
| MS.gene051138 | MS.gene46058 | 0.828293 | 9.74E-55 | -1.69E-46 |
| MS.gene051364 | MS.gene46058 | 0.823133 | 1.63E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene46058 | 0.817716 | 2.85E-52 | -1.69E-46 |
| MS.gene05141 | MS.gene46058 | 0.834194 | 3.45E-56 | -1.69E-46 |
| MS.gene051551 | MS.gene46058 | -0.804984 | 1.66E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene46058 | 0.84328 | 1.54E-58 | -1.69E-46 |
| MS.gene051973 | MS.gene46058 | 0.806789 | 6.94E-50 | -1.69E-46 |
| MS.gene052015 | MS.gene46058 | 0.80269 | 4.98E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene46058 | -0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene46058 | -0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene46058 | -0.821338 | 4.26E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene46058 | 0.824127 | 9.55E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene46058 | 0.858626 | 7.24E-63 | -1.69E-46 |
| MS.gene053561 | MS.gene46058 | 0.846291 | 2.38E-59 | -1.69E-46 |
| MS.gene054616 | MS.gene46058 | 0.813037 | 3.14E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene46058 | -0.803361 | 3.62E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene46058 | 0.818046 | 2.40E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene46058 | 0.830968 | 2.18E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene46058 | -0.839104 | 1.93E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene46058 | -0.824562 | 7.55E-54 | -1.69E-46 |
| MS.gene055124 | MS.gene46058 | 0.823523 | 1.32E-53 | -1.69E-46 |
| MS.gene055139 | MS.gene46058 | 0.812889 | 3.38E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene46058 | 0.876895 | 9.70E-69 | -1.69E-46 |
| MS.gene055202 | MS.gene46058 | 0.817464 | 3.25E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene46058 | -0.838255 | 3.20E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene46058 | -0.846209 | 2.51E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene46058 | -0.829201 | 5.88E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene46058 | -0.808178 | 3.52E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene46058 | 0.810931 | 9.02E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene46058 | 0.82563 | 4.22E-54 | -1.69E-46 |
| MS.gene056313 | MS.gene46058 | 0.814287 | 1.66E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene46058 | -0.828877 | 7.04E-55 | -1.69E-46 |
| MS.gene056550 | MS.gene46058 | 0.869956 | 2.10E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene46058 | -0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene46058 | 0.834975 | 2.20E-56 | -1.69E-46 |
| MS.gene058068 | MS.gene46058 | 0.807004 | 6.25E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene46058 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene058111 | MS.gene46058 | 0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene46058 | 0.827539 | 1.48E-54 | -1.69E-46 |
| MS.gene058173 | MS.gene46058 | 0.80737 | 5.23E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene46058 | 0.822199 | 2.69E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene46058 | -0.802584 | 5.23E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene46058 | -0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene46058 | -0.822878 | 1.87E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene46058 | -0.818925 | 1.52E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene46058 | -0.860939 | 1.46E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene46058 | -0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene46058 | 0.807645 | 4.57E-50 | -1.69E-46 |
| MS.gene059223 | MS.gene46058 | 0.808048 | 3.75E-50 | -1.69E-46 |
| MS.gene059479 | MS.gene46058 | 0.804645 | 1.96E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene46058 | -0.843361 | 1.47E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene46058 | -0.827455 | 1.55E-54 | -1.69E-46 |
| MS.gene059756 | MS.gene46058 | -0.804408 | 2.19E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene46058 | -0.817429 | 3.31E-52 | -1.69E-46 |
| MS.gene059916 | MS.gene46058 | 0.820206 | 7.75E-53 | -1.69E-46 |
| MS.gene060602 | MS.gene46058 | 0.834422 | 3.03E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene46058 | -0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene46058 | -0.855091 | 7.96E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene46058 | -0.801241 | 9.88E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46058.t1 | MTR_7g065265 | 92.411 | 224 | 17 | 0 | 1 | 224 | 1 | 224 | 4.98e-152 | 421 |
| MS.gene46058.t1 | MTR_7g065290 | 91.964 | 224 | 18 | 0 | 1 | 224 | 1 | 224 | 2.95e-151 | 419 |
| MS.gene46058.t1 | MTR_7g065270 | 87.500 | 224 | 28 | 0 | 1 | 224 | 1 | 224 | 3.98e-143 | 399 |
| MS.gene46058.t1 | MTR_7g065590 | 82.143 | 224 | 40 | 0 | 1 | 224 | 1 | 224 | 3.24e-134 | 376 |
| MS.gene46058.t1 | MTR_7g065600 | 79.911 | 224 | 45 | 0 | 1 | 224 | 1 | 224 | 1.00e-133 | 375 |
| MS.gene46058.t1 | MTR_7g065230 | 81.696 | 224 | 36 | 1 | 1 | 224 | 1 | 219 | 6.72e-131 | 367 |
| MS.gene46058.t1 | MTR_7g065260 | 77.778 | 225 | 49 | 1 | 1 | 224 | 8 | 232 | 1.36e-116 | 332 |
| MS.gene46058.t1 | MTR_7g065720 | 70.667 | 225 | 65 | 1 | 1 | 224 | 1 | 225 | 1.27e-112 | 322 |
| MS.gene46058.t1 | MTR_7g065660 | 68.610 | 223 | 70 | 0 | 1 | 223 | 1 | 223 | 1.56e-112 | 321 |
| MS.gene46058.t1 | MTR_7g065630 | 68.161 | 223 | 67 | 1 | 1 | 223 | 19 | 237 | 1.68e-107 | 309 |
| MS.gene46058.t1 | MTR_7g065750 | 66.518 | 224 | 74 | 1 | 1 | 223 | 1 | 224 | 1.85e-106 | 306 |
| MS.gene46058.t1 | MTR_4g019790 | 63.677 | 223 | 81 | 0 | 1 | 223 | 1 | 223 | 9.52e-105 | 301 |
| MS.gene46058.t1 | MTR_7g065740 | 64.286 | 224 | 79 | 1 | 1 | 223 | 1 | 224 | 3.43e-104 | 300 |
| MS.gene46058.t1 | MTR_7g065640 | 63.229 | 223 | 64 | 1 | 1 | 223 | 1 | 205 | 4.37e-100 | 289 |
| MS.gene46058.t1 | MTR_7g065710 | 64.251 | 207 | 70 | 1 | 8 | 214 | 5 | 207 | 1.43e-93 | 273 |
| MS.gene46058.t1 | MTR_4g019780 | 60.930 | 215 | 82 | 2 | 2 | 215 | 3 | 216 | 5.75e-92 | 269 |
| MS.gene46058.t1 | MTR_7g065680 | 64.414 | 222 | 75 | 1 | 1 | 222 | 1 | 218 | 7.77e-91 | 266 |
| MS.gene46058.t1 | MTR_7g065700 | 65.421 | 214 | 70 | 1 | 1 | 214 | 1 | 210 | 2.27e-88 | 260 |
| MS.gene46058.t1 | MTR_6g080440 | 48.077 | 208 | 106 | 2 | 7 | 213 | 3 | 209 | 2.20e-64 | 199 |
| MS.gene46058.t1 | MTR_1g090150 | 46.364 | 220 | 113 | 3 | 6 | 222 | 2 | 219 | 2.87e-62 | 194 |
| MS.gene46058.t1 | MTR_3g099757 | 46.818 | 220 | 115 | 2 | 5 | 223 | 3 | 221 | 1.30e-60 | 189 |
| MS.gene46058.t1 | MTR_8g087425 | 43.779 | 217 | 120 | 2 | 4 | 219 | 2 | 217 | 1.12e-59 | 187 |
| MS.gene46058.t1 | MTR_1g115195 | 43.119 | 218 | 121 | 2 | 7 | 221 | 3 | 220 | 1.00e-56 | 179 |
| MS.gene46058.t1 | MTR_8g087410 | 43.779 | 217 | 119 | 3 | 1 | 216 | 1 | 215 | 6.87e-56 | 177 |
| MS.gene46058.t1 | MTR_5g040430 | 42.342 | 222 | 120 | 3 | 1 | 215 | 1 | 221 | 9.61e-55 | 175 |
| MS.gene46058.t1 | MTR_1g090070 | 42.273 | 220 | 124 | 1 | 7 | 223 | 9 | 228 | 2.20e-52 | 169 |
| MS.gene46058.t1 | MTR_5g037380 | 41.228 | 228 | 124 | 3 | 1 | 220 | 1 | 226 | 1.18e-50 | 164 |
| MS.gene46058.t1 | MTR_4g059730 | 42.056 | 214 | 118 | 3 | 6 | 215 | 3 | 214 | 1.45e-50 | 164 |
| MS.gene46058.t1 | MTR_1g090060 | 40.724 | 221 | 127 | 2 | 7 | 224 | 3 | 222 | 3.77e-49 | 160 |
| MS.gene46058.t1 | MTR_8g061950 | 42.009 | 219 | 119 | 3 | 5 | 215 | 3 | 221 | 1.23e-48 | 159 |
| MS.gene46058.t1 | MTR_1g090100 | 40.183 | 219 | 127 | 2 | 8 | 223 | 3 | 220 | 1.50e-48 | 159 |
| MS.gene46058.t1 | MTR_1g090090 | 38.914 | 221 | 131 | 2 | 7 | 224 | 3 | 222 | 1.24e-47 | 156 |
| MS.gene46058.t1 | MTR_2g070130 | 40.777 | 206 | 117 | 5 | 6 | 209 | 3 | 205 | 1.06e-44 | 149 |
| MS.gene46058.t1 | MTR_3g467420 | 43.216 | 199 | 108 | 5 | 16 | 212 | 18 | 213 | 1.62e-44 | 149 |
| MS.gene46058.t1 | MTR_2g070150 | 40.686 | 204 | 116 | 5 | 6 | 207 | 3 | 203 | 2.45e-44 | 147 |
| MS.gene46058.t1 | MTR_2g070140 | 41.026 | 195 | 110 | 5 | 20 | 212 | 1 | 192 | 2.14e-43 | 145 |
| MS.gene46058.t1 | MTR_3g467430 | 40.758 | 211 | 120 | 5 | 4 | 212 | 6 | 213 | 1.53e-42 | 143 |
| MS.gene46058.t1 | MTR_2g070200 | 41.176 | 204 | 116 | 4 | 6 | 207 | 3 | 204 | 7.23e-42 | 142 |
| MS.gene46058.t1 | MTR_4g124130 | 45.550 | 191 | 94 | 6 | 6 | 191 | 3 | 188 | 1.16e-41 | 141 |
| MS.gene46058.t1 | MTR_8g056940 | 40.670 | 209 | 114 | 6 | 16 | 218 | 13 | 217 | 6.73e-41 | 139 |
| MS.gene46058.t1 | MTR_2g070180 | 39.286 | 196 | 114 | 5 | 16 | 209 | 13 | 205 | 9.19e-41 | 139 |
| MS.gene46058.t1 | MTR_2g070210 | 39.151 | 212 | 120 | 7 | 6 | 212 | 3 | 210 | 2.68e-39 | 135 |
| MS.gene46058.t1 | MTR_2g070120 | 37.619 | 210 | 124 | 5 | 6 | 212 | 3 | 208 | 5.06e-39 | 134 |
| MS.gene46058.t1 | MTR_5g076900 | 38.679 | 212 | 125 | 4 | 3 | 212 | 2 | 210 | 1.10e-38 | 133 |
| MS.gene46058.t1 | MTR_2g070070 | 37.037 | 216 | 131 | 4 | 7 | 220 | 4 | 216 | 3.49e-36 | 127 |
| MS.gene46058.t1 | MTR_2g070060 | 36.058 | 208 | 128 | 4 | 7 | 212 | 4 | 208 | 3.62e-35 | 124 |
| MS.gene46058.t1 | MTR_0186s0030 | 47.328 | 131 | 65 | 3 | 16 | 144 | 13 | 141 | 3.55e-32 | 114 |
| MS.gene46058.t1 | MTR_2g070110 | 38.743 | 191 | 111 | 4 | 16 | 204 | 13 | 199 | 6.71e-30 | 110 |
| MS.gene46058.t1 | MTR_2g072120 | 43.077 | 65 | 36 | 1 | 51 | 114 | 2 | 66 | 1.68e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46058.t1 | AT3G09270 | 53.125 | 224 | 101 | 4 | 3 | 223 | 2 | 224 | 4.50e-77 | 231 |
| MS.gene46058.t1 | AT2G29420 | 47.945 | 219 | 112 | 2 | 3 | 220 | 5 | 222 | 1.13e-71 | 218 |
| MS.gene46058.t1 | AT2G29490 | 49.048 | 210 | 102 | 4 | 1 | 207 | 1 | 208 | 1.18e-60 | 190 |
| MS.gene46058.t1 | AT2G29450 | 47.826 | 207 | 106 | 2 | 3 | 207 | 2 | 208 | 2.02e-58 | 184 |
| MS.gene46058.t1 | AT2G29480 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 7.67e-58 | 182 |
| MS.gene46058.t1 | AT2G29460 | 44.595 | 222 | 120 | 3 | 1 | 220 | 1 | 221 | 5.68e-56 | 178 |
| MS.gene46058.t1 | AT2G29440 | 45.933 | 209 | 109 | 4 | 1 | 207 | 1 | 207 | 2.63e-54 | 174 |
| MS.gene46058.t1 | AT2G29470 | 45.024 | 211 | 110 | 5 | 1 | 207 | 1 | 209 | 2.53e-53 | 171 |
| MS.gene46058.t1 | AT1G10370 | 41.629 | 221 | 120 | 3 | 1 | 214 | 1 | 219 | 8.08e-50 | 162 |
| MS.gene46058.t1 | AT1G69930 | 36.283 | 226 | 138 | 2 | 2 | 221 | 7 | 232 | 1.24e-48 | 159 |
| MS.gene46058.t1 | AT5G62480 | 41.284 | 218 | 117 | 4 | 8 | 215 | 9 | 225 | 2.56e-48 | 159 |
| MS.gene46058.t1 | AT1G59700 | 44.037 | 218 | 114 | 4 | 5 | 214 | 4 | 221 | 2.68e-48 | 159 |
| MS.gene46058.t1 | AT1G27130 | 38.667 | 225 | 129 | 4 | 1 | 217 | 1 | 224 | 6.63e-47 | 155 |
| MS.gene46058.t1 | AT1G59670 | 41.204 | 216 | 119 | 3 | 5 | 212 | 4 | 219 | 1.36e-46 | 154 |
| MS.gene46058.t1 | AT1G78380 | 41.827 | 208 | 116 | 4 | 7 | 212 | 4 | 208 | 1.25e-45 | 151 |
| MS.gene46058.t1 | AT1G74590 | 37.727 | 220 | 130 | 3 | 1 | 214 | 1 | 219 | 1.59e-45 | 151 |
| MS.gene46058.t1 | AT1G10360 | 37.037 | 216 | 129 | 2 | 6 | 214 | 4 | 219 | 1.24e-44 | 149 |
| MS.gene46058.t1 | AT1G17170 | 40.553 | 217 | 123 | 5 | 6 | 220 | 3 | 215 | 1.90e-44 | 148 |
| MS.gene46058.t1 | AT1G78370 | 41.667 | 204 | 113 | 6 | 16 | 217 | 13 | 212 | 2.81e-44 | 148 |
| MS.gene46058.t1 | AT1G78340 | 43.256 | 215 | 114 | 6 | 6 | 216 | 3 | 213 | 3.59e-44 | 147 |
| MS.gene46058.t1 | AT1G53680 | 40.094 | 212 | 122 | 4 | 1 | 209 | 1 | 210 | 6.39e-43 | 144 |
| MS.gene46058.t1 | AT1G27140 | 38.261 | 230 | 126 | 7 | 1 | 218 | 1 | 226 | 1.55e-42 | 144 |
| MS.gene46058.t1 | AT1G78320 | 39.904 | 208 | 120 | 4 | 5 | 210 | 2 | 206 | 1.85e-42 | 143 |
| MS.gene46058.t1 | AT1G69920 | 36.404 | 228 | 135 | 4 | 1 | 218 | 26 | 253 | 3.95e-41 | 140 |
| MS.gene46058.t1 | AT1G17180 | 40.191 | 209 | 120 | 5 | 6 | 212 | 3 | 208 | 4.79e-41 | 139 |
| MS.gene46058.t1 | AT1G78360 | 41.148 | 209 | 117 | 6 | 7 | 212 | 4 | 209 | 6.26e-39 | 134 |
| MS.gene46058.t1 | AT3G43800 | 38.164 | 207 | 119 | 6 | 4 | 204 | 2 | 205 | 9.24e-38 | 131 |
| MS.gene46058.t1 | AT1G17190 | 42.697 | 178 | 97 | 5 | 16 | 191 | 14 | 188 | 9.90e-37 | 128 |
| MS.gene46058.t1 | AT5G62480 | 32.719 | 217 | 111 | 4 | 8 | 215 | 9 | 199 | 1.61e-30 | 112 |
| MS.gene46058.t1 | AT5G62480 | 32.719 | 217 | 110 | 4 | 8 | 215 | 9 | 198 | 3.35e-30 | 111 |
| MS.gene46058.t1 | AT1G78320 | 33.010 | 206 | 108 | 4 | 6 | 210 | 3 | 179 | 3.27e-26 | 100 |
| MS.gene46058.t1 | AT2G02380 | 26.512 | 215 | 139 | 6 | 5 | 207 | 9 | 216 | 9.00e-15 | 70.9 |
| MS.gene46058.t1 | AT2G02390 | 26.728 | 217 | 140 | 5 | 3 | 207 | 4 | 213 | 2.07e-12 | 64.7 |
| MS.gene46058.t1 | AT2G02390 | 26.339 | 224 | 139 | 6 | 3 | 207 | 4 | 220 | 1.52e-11 | 62.4 |
| MS.gene46058.t1 | AT2G02390 | 37.113 | 97 | 57 | 2 | 3 | 96 | 4 | 99 | 3.90e-11 | 60.5 |
Find 53 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCACGTTTC+TGG | 0.164876 | 7.2:-42795953 | MS.gene46058:CDS |
| TACCTTGTCATCTATGAAAT+TGG | 0.177857 | 7.2:+42795929 | None:intergenic |
| TTGGATGATTGTTGAATTCT+TGG | 0.233990 | 7.2:+42793479 | None:intergenic |
| AATCACAAGGGACTCTGATA+TGG | 0.285005 | 7.2:+42796034 | None:intergenic |
| AGTCCAAATGCTTCTTGTAT+AGG | 0.292947 | 7.2:+42793547 | None:intergenic |
| ACAGGAACTTTCTTGTAAAC+AGG | 0.303772 | 7.2:+42796077 | None:intergenic |
| TTCTTTGGTGGGGAGGATAT+TGG | 0.313435 | 7.2:-42793613 | MS.gene46058:CDS |
| TAAGGATCATTAGGCAAGAT+AGG | 0.313856 | 7.2:+42795978 | None:intergenic |
| CTCTACGATGGCATCAAATA+AGG | 0.319615 | 7.2:-42796237 | None:intergenic |
| TGGCTCCAATTGTAAAGCTT+TGG | 0.323925 | 7.2:+42793499 | None:intergenic |
| GAGCTCAAGGACAAATTCTT+TGG | 0.339009 | 7.2:-42793628 | MS.gene46058:CDS |
| CAACAATCATCCAATTGTTA+AGG | 0.374730 | 7.2:-42793470 | MS.gene46058:CDS |
| GCCTCCTAGAGAGACCCTTT+TGG | 0.417652 | 7.2:-42793440 | MS.gene46058:CDS |
| CCACCTATACAAGAAGCATT+TGG | 0.430472 | 7.2:-42793550 | MS.gene46058:CDS |
| AATTTCCAAAGCTTTACAAT+TGG | 0.430707 | 7.2:-42793504 | MS.gene46058:CDS |
| ATCTCCACCCTTGTTACAAA+TGG | 0.430811 | 7.2:+42796182 | None:intergenic |
| GGAGATTGCTCTAAAATTGA+AGG | 0.444678 | 7.2:-42796165 | MS.gene46058:CDS |
| ATCAGTGCTCCAATGGTGTT+CGG | 0.478017 | 7.2:-42793732 | MS.gene46058:intron |
| TTATCATTATGAACAAATAC+AGG | 0.499212 | 7.2:+42796059 | None:intergenic |
| TTGAATATATTGATGAGACT+TGG | 0.500568 | 7.2:-42796010 | MS.gene46058:CDS |
| ACAAGCTTTCCGAACACCAT+TGG | 0.501376 | 7.2:+42793723 | None:intergenic |
| AATATGAGCAAGAAAAGGTT+GGG | 0.503590 | 7.2:-42796130 | MS.gene46058:CDS |
| AAGGATCATTAGGCAAGATA+GGG | 0.505915 | 7.2:+42795979 | None:intergenic |
| GAGCTTTGTAGAATGCCAAA+AGG | 0.508352 | 7.2:+42793425 | None:intergenic |
| CTCAAGGACAAATTCTTTGG+TGG | 0.512720 | 7.2:-42793625 | MS.gene46058:CDS |
| CAGGAACTTTCTTGTAAACA+GGG | 0.515430 | 7.2:+42796078 | None:intergenic |
| AAATATGAGCAAGAAAAGGT+TGG | 0.516900 | 7.2:-42796131 | MS.gene46058:CDS |
| ATCACAAGGGACTCTGATAT+GGG | 0.519485 | 7.2:+42796035 | None:intergenic |
| CCAAATGCTTCTTGTATAGG+TGG | 0.519842 | 7.2:+42793550 | None:intergenic |
| TCAAGGACAAATTCTTTGGT+GGG | 0.523453 | 7.2:-42793624 | MS.gene46058:CDS |
| AGAACGTGAGAAGAGTATTG+AGG | 0.526929 | 7.2:-42793683 | MS.gene46058:CDS |
| ATTTCTTGAGAATGAGCTCA+AGG | 0.546430 | 7.2:-42793641 | MS.gene46058:CDS |
| ATCAAATAAGGAAGAGGTGA+AGG | 0.549693 | 7.2:-42796225 | MS.gene46058:CDS |
| ATACAAATATGAGCAAGAAA+AGG | 0.550926 | 7.2:-42796135 | MS.gene46058:CDS |
| GAGTATTGAGGAAACAAAAG+AGG | 0.559224 | 7.2:-42793671 | MS.gene46058:CDS |
| TGATCCTTATAAAAGAGCCT+TGG | 0.561258 | 7.2:-42795964 | MS.gene46058:CDS |
| AGCTTTGTAGAATGCCAAAA+GGG | 0.565015 | 7.2:+42793426 | None:intergenic |
| TGGAAAGTCCATTTGTAACA+AGG | 0.573831 | 7.2:-42796190 | MS.gene46058:CDS |
| CAAGGACAAATTCTTTGGTG+GGG | 0.574827 | 7.2:-42793623 | MS.gene46058:CDS |
| GATGGCATCAAATAAGGAAG+AGG | 0.575114 | 7.2:-42796231 | MS.gene46058:CDS |
| GGACAAATTCTTTGGTGGGG+AGG | 0.579613 | 7.2:-42793620 | MS.gene46058:CDS |
| AATGCCAAAAGGGTCTCTCT+AGG | 0.585218 | 7.2:+42793436 | None:intergenic |
| ACTGAAATTGTTCACTAGTG+AGG | 0.598807 | 7.2:-42793527 | MS.gene46058:CDS |
| CAATATATTCAAGAATCACA+AGG | 0.601780 | 7.2:+42796021 | None:intergenic |
| CAAATGCTTCTTGTATAGGT+GGG | 0.601872 | 7.2:+42793551 | None:intergenic |
| GGAAAGTCCATTTGTAACAA+GGG | 0.613221 | 7.2:-42796189 | MS.gene46058:CDS |
| GAGATTGCTCTAAAATTGAA+GGG | 0.615792 | 7.2:-42796164 | MS.gene46058:CDS |
| GCCAAAAGGGTCTCTCTAGG+AGG | 0.628476 | 7.2:+42793439 | None:intergenic |
| GTCCAATTTCATAGATGACA+AGG | 0.633419 | 7.2:-42795931 | MS.gene46058:intron |
| AAGTCCATTTGTAACAAGGG+TGG | 0.642673 | 7.2:-42796186 | MS.gene46058:CDS |
| TTGTGAGATCAGTGCTCCAA+TGG | 0.655370 | 7.2:-42793739 | MS.gene46058:intron |
| ATTGGACCAGAAACGTGCCA+AGG | 0.673197 | 7.2:+42795947 | None:intergenic |
| AATATATTCAAGAATCACAA+GGG | 0.678725 | 7.2:+42796022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAATGAAAACATT+AGG | + | chr7.2:42794988-42795007 | None:intergenic | 10.0% |
| !! | TAAAAAAAAATGAAAACATT+CGG | - | chr7.2:42794292-42794311 | MS.gene46058:intron | 10.0% |
| !! | TAAAAAAAATGAAAACATTA+GGG | + | chr7.2:42794987-42795006 | None:intergenic | 10.0% |
| !! | TTTCTAATATTTAAAAATTG+AGG | - | chr7.2:42794819-42794838 | MS.gene46058:intron | 10.0% |
| !!! | ATTTGTTAAAAAAAAACAAT+TGG | + | chr7.2:42795680-42795699 | None:intergenic | 10.0% |
| !!! | ATTTTAACAAAATTTATTAC+AGG | - | chr7.2:42795359-42795378 | MS.gene46058:intron | 10.0% |
| !!! | ATTTTAACAAAATTTATTAC+AGG | + | chr7.2:42795378-42795359 | None:intergenic | 10.0% |
| !!! | GAAAAATATTCTTTTTTTTA+CGG | - | chr7.2:42794376-42794395 | MS.gene46058:intron | 10.0% |
| !!! | GATAAACAAAATAATTTTTT+TGG | - | chr7.2:42795492-42795511 | MS.gene46058:intron | 10.0% |
| !!! | TTTTAACAAAATTTATTACA+GGG | - | chr7.2:42795360-42795379 | MS.gene46058:intron | 10.0% |
| !!! | TTTTAACAAAATTTATTACA+GGG | + | chr7.2:42795379-42795360 | None:intergenic | 10.0% |
| !! | AAAAAAAAATGAAAACATTC+GGG | - | chr7.2:42794293-42794312 | MS.gene46058:intron | 15.0% |
| !! | ATTATTTGTATTGAAAATTG+AGG | - | chr7.2:42794859-42794878 | MS.gene46058:intron | 15.0% |
| !! | TAAAAATGAATACAAAAATC+TGG | - | chr7.2:42794234-42794253 | MS.gene46058:intron | 15.0% |
| !! | TAAAAATGAATACAAAAATC+TGG | + | chr7.2:42794253-42794234 | None:intergenic | 15.0% |
| !! | TTTAACAAAATTTATTACAG+GGG | - | chr7.2:42795361-42795380 | MS.gene46058:intron | 15.0% |
| !! | TTTAACAAAATTTATTACAG+GGG | + | chr7.2:42795380-42795361 | None:intergenic | 15.0% |
| !! | TTTATTTGTATTGAAAATTG+AGG | + | chr7.2:42794593-42794612 | None:intergenic | 15.0% |
| !!! | AAGAATATTTTTCATTTTTC+CGG | + | chr7.2:42794369-42794388 | None:intergenic | 15.0% |
| !!! | AAGTTAATTGATTTGTTTTT+AGG | + | chr7.2:42795810-42795829 | None:intergenic | 15.0% |
| !!! | TGAAACAATTTTTTATCAAA+TGG | + | chr7.2:42795590-42795609 | None:intergenic | 15.0% |
| !! | AATATATTCAAGAATCACAA+GGG | + | chr7.2:42793607-42793626 | None:intergenic | 20.0% |
| !! | GGTATATAAATCATGTTATA+CGG | + | chr7.2:42794420-42794439 | None:intergenic | 20.0% |
| !! | GTATAACATGATTTATATAC+CGG | - | chr7.2:42794419-42794438 | MS.gene46058:intron | 20.0% |
| !! | TAAAAAAAAACAATTGGACT+CGG | + | chr7.2:42795674-42795693 | None:intergenic | 20.0% |
| !! | TTAACAAAATTTATTACAGG+GGG | - | chr7.2:42795362-42795381 | MS.gene46058:intron | 20.0% |
| !! | TTAACAAAATTTATTACAGG+GGG | + | chr7.2:42795381-42795362 | None:intergenic | 20.0% |
| !! | TTATCATTATGAACAAATAC+AGG | + | chr7.2:42793570-42793589 | None:intergenic | 20.0% |
| !! | TTCGAAAAATAAAAACAATC+TGG | + | chr7.2:42794649-42794668 | None:intergenic | 20.0% |
| !!! | AAAAAGATTAATTAGCTCTT+TGG | - | chr7.2:42794541-42794560 | MS.gene46058:intron | 20.0% |
| !!! | AAAAGATTAATTAGCTCTTT+GGG | - | chr7.2:42794542-42794561 | MS.gene46058:intron | 20.0% |
| !!! | ATTTTTTTATATTGTACACG+TGG | - | chr7.2:42794058-42794077 | MS.gene46058:intron | 20.0% |
| !!! | ATTTTTTTATATTGTACACG+TGG | + | chr7.2:42794077-42794058 | None:intergenic | 20.0% |
| !!! | TTCCAGTATTGAAAAAAATA+TGG | - | chr7.2:42794928-42794947 | MS.gene46058:intron | 20.0% |
| !!! | TTCCATATTTTTTTCAATAC+CGG | - | chr7.2:42794347-42794366 | MS.gene46058:intron | 20.0% |
| !!! | TTCCATATTTTTTTCAATAC+TGG | + | chr7.2:42794366-42794347 | None:intergenic | 20.0% |
| ! | AAAAAAAAACAATTGGACTC+GGG | + | chr7.2:42795673-42795692 | None:intergenic | 25.0% |
| ! | AAAAATCATGTCCAAATAAC+AGG | + | chr7.2:42794467-42794486 | None:intergenic | 25.0% |
| ! | AATTGAGGATAAAAACAATC+TGG | - | chr7.2:42794834-42794853 | MS.gene46058:intron | 25.0% |
| ! | AATTTCCAAAGCTTTACAAT+TGG | - | chr7.2:42796122-42796141 | MS.gene46058:CDS | 25.0% |
| ! | ACATCGATAAAAATAGAAGA+GGG | + | chr7.2:42793730-42793749 | None:intergenic | 25.0% |
| ! | ATACAAATATGAGCAAGAAA+AGG | - | chr7.2:42793491-42793510 | MS.gene46058:CDS | 25.0% |
| ! | ATACATTGTATCCTGTTATT+TGG | - | chr7.2:42794453-42794472 | MS.gene46058:intron | 25.0% |
| ! | CAATATATTCAAGAATCACA+AGG | + | chr7.2:42793608-42793627 | None:intergenic | 25.0% |
| ! | TAAAGTTGGATATTTGAACT+TGG | + | chr7.2:42793762-42793781 | None:intergenic | 25.0% |
| ! | TAACAAAATTTATTACAGGG+GGG | - | chr7.2:42795363-42795382 | MS.gene46058:intron | 25.0% |
| ! | TAACAAAATTTATTACAGGG+GGG | + | chr7.2:42795382-42795363 | None:intergenic | 25.0% |
| ! | TACATCGATAAAAATAGAAG+AGG | + | chr7.2:42793731-42793750 | None:intergenic | 25.0% |
| ! | TATTTAGTGCTAACTAAAGT+TGG | + | chr7.2:42793808-42793827 | None:intergenic | 25.0% |
| ! | TTGAATATATTGATGAGACT+TGG | - | chr7.2:42793616-42793635 | MS.gene46058:CDS | 25.0% |
| ! | TTGACTAAGTAAATTTGAGA+TGG | - | chr7.2:42793829-42793848 | MS.gene46058:intron | 25.0% |
| !! | ATGGTACTTTATTTACCTTT+CGG | + | chr7.2:42795571-42795590 | None:intergenic | 25.0% |
| !! | TGACTAAGTAAATTTGAGAT+GGG | - | chr7.2:42793830-42793849 | MS.gene46058:intron | 25.0% |
| !! | TTCCGGTATTGAAAAAAATA+TGG | + | chr7.2:42794352-42794371 | None:intergenic | 25.0% |
| !! | TTTAGGTTAAATATCACATG+TGG | + | chr7.2:42795793-42795812 | None:intergenic | 25.0% |
| !!! | ATCTTTTTTTGTTGACAACA+TGG | + | chr7.2:42795465-42795484 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTGTTGACAACAT+GGG | + | chr7.2:42795464-42795483 | None:intergenic | 25.0% |
| !!! | TGAGAAAGTATCTAACTTAA+AGG | - | chr7.2:42795766-42795785 | MS.gene46058:intron | 25.0% |
| AAATATGAGCAAGAAAAGGT+TGG | - | chr7.2:42793495-42793514 | MS.gene46058:CDS | 30.0% | |
| AAGAATCTGAATTCGATTTC+TGG | + | chr7.2:42795614-42795633 | None:intergenic | 30.0% | |
| AATATGAGCAAGAAAAGGTT+GGG | - | chr7.2:42793496-42793515 | MS.gene46058:CDS | 30.0% | |
| AGAATCTGAATTCGATTTCT+GGG | + | chr7.2:42795613-42795632 | None:intergenic | 30.0% | |
| CAACAATCATCCAATTGTTA+AGG | - | chr7.2:42796156-42796175 | MS.gene46058:CDS | 30.0% | |
| GAACCAAAAAGCTATGATTA+CGG | + | chr7.2:42796056-42796075 | None:intergenic | 30.0% | |
| GAGTAATGAGTTCCATAAAA+TGG | + | chr7.2:42795649-42795668 | None:intergenic | 30.0% | |
| GTTAACCATTCGATTATCAA+GGG | - | chr7.2:42795517-42795536 | MS.gene46058:intron | 30.0% | |
| TACCTTGTCATCTATGAAAT+TGG | + | chr7.2:42793700-42793719 | None:intergenic | 30.0% | |
| TGTTAACCATTCGATTATCA+AGG | - | chr7.2:42795516-42795535 | MS.gene46058:intron | 30.0% | |
| TTGGATGATTGTTGAATTCT+TGG | + | chr7.2:42796150-42796169 | None:intergenic | 30.0% | |
| ! | ATTAACCCATTTGAGATCTT+AGG | - | chr7.2:42795426-42795445 | MS.gene46058:intron | 30.0% |
| ! | CAATGTATATTGATTGACTC+CGG | + | chr7.2:42794441-42794460 | None:intergenic | 30.0% |
| ! | GCTCTTTTATAAGGATCATT+AGG | + | chr7.2:42793660-42793679 | None:intergenic | 30.0% |
| ! | GGCAATTTTTCCTTAACAAT+TGG | + | chr7.2:42796169-42796188 | None:intergenic | 30.0% |
| ! | TTTATCCCTTGATAATCGAA+TGG | + | chr7.2:42795525-42795544 | None:intergenic | 30.0% |
| !! | CTAAACAATTCGCCATTTTA+TGG | - | chr7.2:42795634-42795653 | MS.gene46058:intron | 30.0% |
| !! | GAGATTGCTCTAAAATTGAA+GGG | - | chr7.2:42793462-42793481 | MS.gene46058:CDS | 30.0% |
| AAGGATCATTAGGCAAGATA+GGG | + | chr7.2:42793650-42793669 | None:intergenic | 35.0% | |
| ACACACCTAAGATCTCAAAT+GGG | + | chr7.2:42795434-42795453 | None:intergenic | 35.0% | |
| ACAGGAACTTTCTTGTAAAC+AGG | + | chr7.2:42793552-42793571 | None:intergenic | 35.0% | |
| ACGGAATCTTCAAATTACAG+GGG | - | chr7.2:42795332-42795351 | MS.gene46058:intron | 35.0% | |
| ACGGAATCTTCAAATTACAG+GGG | + | chr7.2:42795351-42795332 | None:intergenic | 35.0% | |
| ACTGAAATTGTTCACTAGTG+AGG | - | chr7.2:42796099-42796118 | MS.gene46058:CDS | 35.0% | |
| AGTCCAAATGCTTCTTGTAT+AGG | + | chr7.2:42796082-42796101 | None:intergenic | 35.0% | |
| ATCAAATAAGGAAGAGGTGA+AGG | - | chr7.2:42793401-42793420 | MS.gene46058:CDS | 35.0% | |
| ATTTCTTGAGAATGAGCTCA+AGG | - | chr7.2:42795985-42796004 | MS.gene46058:CDS | 35.0% | |
| CAAATGCTTCTTGTATAGGT+GGG | + | chr7.2:42796078-42796097 | None:intergenic | 35.0% | |
| CAGGAACTTTCTTGTAAACA+GGG | + | chr7.2:42793551-42793570 | None:intergenic | 35.0% | |
| GACGGAATCTTCAAATTACA+GGG | - | chr7.2:42795331-42795350 | MS.gene46058:intron | 35.0% | |
| GACGGAATCTTCAAATTACA+GGG | + | chr7.2:42795350-42795331 | None:intergenic | 35.0% | |
| GGAAAGTCCATTTGTAACAA+GGG | - | chr7.2:42793437-42793456 | MS.gene46058:CDS | 35.0% | |
| GTCCAATTTCATAGATGACA+AGG | - | chr7.2:42793695-42793714 | MS.gene46058:CDS | 35.0% | |
| TAAGGATCATTAGGCAAGAT+AGG | + | chr7.2:42793651-42793670 | None:intergenic | 35.0% | |
| TCAAGGACAAATTCTTTGGT+GGG | - | chr7.2:42796002-42796021 | MS.gene46058:CDS | 35.0% | |
| TGATCCTTATAAAAGAGCCT+TGG | - | chr7.2:42793662-42793681 | MS.gene46058:CDS | 35.0% | |
| TGGAAAGTCCATTTGTAACA+AGG | - | chr7.2:42793436-42793455 | MS.gene46058:CDS | 35.0% | |
| ! | AGCTTTGTAGAATGCCAAAA+GGG | + | chr7.2:42796203-42796222 | None:intergenic | 35.0% |
| !! | AGCACTGATCTCACAAATTA+AGG | + | chr7.2:42795883-42795902 | None:intergenic | 35.0% |
| !! | ATTAATTAGCTCTTTGGGAC+TGG | - | chr7.2:42794547-42794566 | MS.gene46058:intron | 35.0% |
| !! | GAGTATTGAGGAAACAAAAG+AGG | - | chr7.2:42795955-42795974 | MS.gene46058:CDS | 35.0% |
| !! | GGAGATTGCTCTAAAATTGA+AGG | - | chr7.2:42793461-42793480 | MS.gene46058:CDS | 35.0% |
| AAGTCCATTTGTAACAAGGG+TGG | - | chr7.2:42793440-42793459 | MS.gene46058:CDS | 40.0% | |
| AATCACAAGGGACTCTGATA+TGG | + | chr7.2:42793595-42793614 | None:intergenic | 40.0% | |
| ATCACAAGGGACTCTGATAT+GGG | + | chr7.2:42793594-42793613 | None:intergenic | 40.0% | |
| ATCTCCACCCTTGTTACAAA+TGG | + | chr7.2:42793447-42793466 | None:intergenic | 40.0% | |
| CAAGGACAAATTCTTTGGTG+GGG | - | chr7.2:42796003-42796022 | MS.gene46058:CDS | 40.0% | |
| CCAAATGCTTCTTGTATAGG+TGG | + | chr7.2:42796079-42796098 | None:intergenic | 40.0% | |
| CGACGGAATCTTCAAATTAC+AGG | - | chr7.2:42795330-42795349 | MS.gene46058:intron | 40.0% | |
| CGACGGAATCTTCAAATTAC+AGG | + | chr7.2:42795349-42795330 | None:intergenic | 40.0% | |
| CTCAAGGACAAATTCTTTGG+TGG | - | chr7.2:42796001-42796020 | MS.gene46058:CDS | 40.0% | |
| GACACACCTAAGATCTCAAA+TGG | + | chr7.2:42795435-42795454 | None:intergenic | 40.0% | |
| GAGCTCAAGGACAAATTCTT+TGG | - | chr7.2:42795998-42796017 | MS.gene46058:CDS | 40.0% | |
| GTGTTTACCCCCTGTAATTT+GGG | - | chr7.2:42793860-42793879 | MS.gene46058:intron | 40.0% | |
| TAATTCGAACTTCAGCCGAA+AGG | - | chr7.2:42795553-42795572 | MS.gene46058:intron | 40.0% | |
| TGGCTCCAATTGTAAAGCTT+TGG | + | chr7.2:42796130-42796149 | None:intergenic | 40.0% | |
| TGTGTTTACCCCCTGTAATT+TGG | - | chr7.2:42793859-42793878 | MS.gene46058:intron | 40.0% | |
| TGTTTACCCCCCTGTAATTT+GGG | + | chr7.2:42795403-42795422 | None:intergenic | 40.0% | |
| TTGTTGACAACATGGGTCTA+AGG | + | chr7.2:42795457-42795476 | None:intergenic | 40.0% | |
| TTTATTACAGGGGGGAAAAC+CGG | - | chr7.2:42795371-42795390 | MS.gene46058:intron | 40.0% | |
| TTTATTACAGGGGGGAAAAC+CGG | + | chr7.2:42795390-42795371 | None:intergenic | 40.0% | |
| ! | AAGGAAGAGGTGAAGGTTTT+TGG | - | chr7.2:42793408-42793427 | MS.gene46058:CDS | 40.0% |
| ! | CTGCCGTAATCATAGCTTTT+TGG | - | chr7.2:42796050-42796069 | MS.gene46058:CDS | 40.0% |
| ! | GAGCTTTGTAGAATGCCAAA+AGG | + | chr7.2:42796204-42796223 | None:intergenic | 40.0% |
| !! | AGAACGTGAGAAGAGTATTG+AGG | - | chr7.2:42795943-42795962 | MS.gene46058:CDS | 40.0% |
| !! | AGAGGTGAAGGTTTTTGGAT+TGG | - | chr7.2:42793413-42793432 | MS.gene46058:CDS | 40.0% |
| !! | CCACCTATACAAGAAGCATT+TGG | - | chr7.2:42796076-42796095 | MS.gene46058:CDS | 40.0% |
| AATGCCAAAAGGGTCTCTCT+AGG | + | chr7.2:42796193-42796212 | None:intergenic | 45.0% | |
| ACAAGCTTTCCGAACACCAT+TGG | + | chr7.2:42795906-42795925 | None:intergenic | 45.0% | |
| ATCAGTGCTCCAATGGTGTT+CGG | - | chr7.2:42795894-42795913 | MS.gene46058:intron | 45.0% | |
| GTCATCAGAAAAAGGTGACG+TGG | - | chr7.2:42795258-42795277 | MS.gene46058:intron | 45.0% | |
| GTCATCAGAAAAAGGTGACG+TGG | + | chr7.2:42795277-42795258 | None:intergenic | 45.0% | |
| GTGTTTACCCCCCTGTAATT+TGG | + | chr7.2:42795404-42795423 | None:intergenic | 45.0% | |
| TTCTTTGGTGGGGAGGATAT+TGG | - | chr7.2:42796013-42796032 | MS.gene46058:CDS | 45.0% | |
| TTGTGAGATCAGTGCTCCAA+TGG | - | chr7.2:42795887-42795906 | MS.gene46058:intron | 45.0% | |
| ! | CGTGCCAAGGCTCTTTTATA+AGG | + | chr7.2:42793669-42793688 | None:intergenic | 45.0% |
| !! | GGTGAAGGTTTTTGGATTGG+TGG | - | chr7.2:42793416-42793435 | MS.gene46058:CDS | 45.0% |
| !! | GTCACCTTTTTCTGATGACG+TGG | - | chr7.2:42794005-42794024 | MS.gene46058:intron | 45.0% |
| !! | GTCACCTTTTTCTGATGACG+TGG | + | chr7.2:42794024-42794005 | None:intergenic | 45.0% |
| !! | AAAAAAAATAATAATAAAGT+TGG | + | chr7.2:42793776-42793795 | None:intergenic | 5.0% |
| !! | AGAAATTTATTTAAAAATTT+AGG | - | chr7.2:42794738-42794757 | MS.gene46058:intron | 5.0% |
| !! | TAAAAATAAAAAATAAAATC+TGG | - | chr7.2:42794264-42794283 | MS.gene46058:intron | 5.0% |
| !! | TAAAAATAAAAAATAAAATC+TGG | + | chr7.2:42794283-42794264 | None:intergenic | 5.0% |
| !!! | ATAAACAAAATAATTTTTTT+GGG | - | chr7.2:42795493-42795512 | MS.gene46058:intron | 5.0% |
| !!! | CTTTATTATTATTTTTTTTA+AGG | - | chr7.2:42793777-42793796 | MS.gene46058:intron | 5.0% |
| !!! | TTCATTTTTATTAATTTTTT+CGG | - | chr7.2:42795055-42795074 | MS.gene46058:intron | 5.0% |
| !!! | TTCATTTTTATTAATTTTTT+CGG | + | chr7.2:42795074-42795055 | None:intergenic | 5.0% |
| AAAGAGCCTTGGCACGTTTC+TGG | - | chr7.2:42793673-42793692 | MS.gene46058:CDS | 50.0% | |
| AACTCGCCCAAATTACAGGG+GGG | - | chr7.2:42795394-42795413 | MS.gene46058:intron | 50.0% | |
| ATTGGACCAGAAACGTGCCA+AGG | + | chr7.2:42793682-42793701 | None:intergenic | 50.0% | |
| CCTGTAATTTGGGCGAGTTC+CGG | - | chr7.2:42793870-42793889 | MS.gene46058:intron | 50.0% | |
| CCTGTAATTTGGGCGAGTTC+CGG | + | chr7.2:42793889-42793870 | None:intergenic | 50.0% | |
| CGGAACTCGCCCAAATTACA+GGG | - | chr7.2:42795391-42795410 | MS.gene46058:intron | 50.0% | |
| CGGAACTCGCCCAAATTACA+GGG | + | chr7.2:42795410-42795391 | None:intergenic | 50.0% | |
| CGTGCCACGTCATCAGAAAA+AGG | - | chr7.2:42795250-42795269 | MS.gene46058:intron | 50.0% | |
| CGTGCCACGTCATCAGAAAA+AGG | + | chr7.2:42795269-42795250 | None:intergenic | 50.0% | |
| GAACTCGCCCAAATTACAGG+GGG | - | chr7.2:42795393-42795412 | MS.gene46058:intron | 50.0% | |
| GAACTCGCCCAAATTACAGG+GGG | + | chr7.2:42795412-42795393 | None:intergenic | 50.0% | |
| GGAACTCGCCCAAATTACAG+GGG | - | chr7.2:42795392-42795411 | MS.gene46058:intron | 50.0% | |
| GGAACTCGCCCAAATTACAG+GGG | + | chr7.2:42795411-42795392 | None:intergenic | 50.0% | |
| GGACAAATTCTTTGGTGGGG+AGG | - | chr7.2:42796006-42796025 | MS.gene46058:CDS | 50.0% | |
| ! | TTTGACCAGGGGGTTTTCGA+CGG | + | chr7.2:42793950-42793969 | None:intergenic | 50.0% |
| AAAACCCCCCTGGTCAAACC+TGG | + | chr7.2:42795310-42795329 | None:intergenic | 55.0% | |
| AGATTCCGTCGAAAACCCCC+TGG | - | chr7.2:42793942-42793961 | MS.gene46058:intron | 55.0% | |
| CCGGAACTCGCCCAAATTAC+AGG | - | chr7.2:42795390-42795409 | MS.gene46058:intron | 55.0% | |
| CCGGAACTCGCCCAAATTAC+AGG | + | chr7.2:42795409-42795390 | None:intergenic | 55.0% | |
| GAAAACCCCCTGGTCAAACC+TGG | - | chr7.2:42793952-42793971 | MS.gene46058:intron | 55.0% | |
| GCCAAAAGGGTCTCTCTAGG+AGG | + | chr7.2:42796190-42796209 | None:intergenic | 55.0% | |
| ! | GCCTCCTAGAGAGACCCTTT+TGG | - | chr7.2:42796186-42796205 | MS.gene46058:CDS | 55.0% |
| ! | TTGACCAGGGGGGTTTTCGA+CGG | - | chr7.2:42795313-42795332 | MS.gene46058:intron | 55.0% |
| CGTGTGCCAGGTTTGACCAG+GGG | - | chr7.2:42795301-42795320 | MS.gene46058:intron | 60.0% | |
| CGTGTGCCAGGTTTGACCAG+GGG | + | chr7.2:42795320-42795301 | None:intergenic | 60.0% | |
| GATTCCGTCGAAAACCCCCC+TGG | + | chr7.2:42795320-42795339 | None:intergenic | 60.0% | |
| GCGTGTGCCAGGTTTGACCA+GGG | - | chr7.2:42795300-42795319 | MS.gene46058:intron | 60.0% | |
| GCGTGTGCCAGGTTTGACCA+GGG | + | chr7.2:42795319-42795300 | None:intergenic | 60.0% | |
| GTGTGCCAGGTTTGACCAGG+GGG | - | chr7.2:42795302-42795321 | MS.gene46058:intron | 60.0% | |
| GTGTGCCAGGTTTGACCAGG+GGG | + | chr7.2:42795321-42795302 | None:intergenic | 60.0% | |
| TGTGCCAGGTTTGACCAGGG+GGG | - | chr7.2:42795303-42795322 | MS.gene46058:intron | 60.0% | |
| ATCAGCACCTGGCGTGTGCC+AGG | - | chr7.2:42795289-42795308 | MS.gene46058:intron | 65.0% | |
| ATCAGCACCTGGCGTGTGCC+AGG | + | chr7.2:42795308-42795289 | None:intergenic | 65.0% | |
| GGCGTGTGCCAGGTTTGACC+AGG | - | chr7.2:42795299-42795318 | MS.gene46058:intron | 65.0% | |
| GGCGTGTGCCAGGTTTGACC+AGG | + | chr7.2:42795318-42795299 | None:intergenic | 65.0% | |
| GGTCAAACCTGGCACACGCC+AGG | - | chr7.2:42793963-42793982 | MS.gene46058:intron | 65.0% | |
| GGTCAAACCTGGCACACGCC+AGG | + | chr7.2:42793982-42793963 | None:intergenic | 65.0% | |
| TGGCACGCCACATCAGCACC+TGG | - | chr7.2:42795278-42795297 | MS.gene46058:intron | 65.0% | |
| TGGCACGCCACATCAGCACC+TGG | + | chr7.2:42795297-42795278 | None:intergenic | 65.0% | |
| !! | GCACACGCCAGGTGCTGATG+TGG | - | chr7.2:42793974-42793993 | MS.gene46058:intron | 65.0% |
| !! | GCACACGCCAGGTGCTGATG+TGG | + | chr7.2:42793993-42793974 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 42793396 | 42796252 | 42793396 | ID=MS.gene46058 |
| chr7.2 | mRNA | 42793396 | 42796252 | 42793396 | ID=MS.gene46058.t1;Parent=MS.gene46058 |
| chr7.2 | exon | 42795932 | 42796252 | 42795932 | ID=MS.gene46058.t1.exon1;Parent=MS.gene46058.t1 |
| chr7.2 | CDS | 42795932 | 42796252 | 42795932 | ID=cds.MS.gene46058.t1;Parent=MS.gene46058.t1 |
| chr7.2 | exon | 42793396 | 42793749 | 42793396 | ID=MS.gene46058.t1.exon2;Parent=MS.gene46058.t1 |
| chr7.2 | CDS | 42793396 | 42793749 | 42793396 | ID=cds.MS.gene46058.t1;Parent=MS.gene46058.t1 |
| Gene Sequence |
| Protein sequence |
