Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61543.t1 | XP_003597891.1 | 99.3 | 147 | 1 | 0 | 1 | 147 | 1 | 147 | 3.40E-78 | 300.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61543.t1 | C0HLF1 | 31.9 | 144 | 96 | 2 | 1 | 142 | 1 | 144 | 3.2e-16 | 86.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61543.t1 | Q2HUA7 | 99.3 | 147 | 1 | 0 | 1 | 147 | 1 | 147 | 2.5e-78 | 300.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049140 | MS.gene61543 | 0.828089 | 1.09E-54 | -1.69E-46 |
| MS.gene049580 | MS.gene61543 | 0.858756 | 6.62E-63 | -1.69E-46 |
| MS.gene049653 | MS.gene61543 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene61543 | 0.880458 | 5.40E-70 | -1.69E-46 |
| MS.gene050288 | MS.gene61543 | 0.807522 | 4.85E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene61543 | 0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene050320 | MS.gene61543 | 0.848127 | 7.47E-60 | -1.69E-46 |
| MS.gene050437 | MS.gene61543 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene050752 | MS.gene61543 | 0.861593 | 9.20E-64 | -1.69E-46 |
| MS.gene050838 | MS.gene61543 | 0.831169 | 1.94E-55 | -1.69E-46 |
| MS.gene050955 | MS.gene61543 | 0.852951 | 3.30E-61 | -1.69E-46 |
| MS.gene051003 | MS.gene61543 | 0.8026 | 5.19E-49 | -1.69E-46 |
| MS.gene051033 | MS.gene61543 | -0.822301 | 2.55E-53 | -1.69E-46 |
| MS.gene051063 | MS.gene61543 | 0.845998 | 2.86E-59 | -1.69E-46 |
| MS.gene051241 | MS.gene61543 | 0.812714 | 3.69E-51 | -1.69E-46 |
| MS.gene051245 | MS.gene61543 | 0.842192 | 3.00E-58 | -1.69E-46 |
| MS.gene051330 | MS.gene61543 | 0.858281 | 9.18E-63 | -1.69E-46 |
| MS.gene05134 | MS.gene61543 | 0.83456 | 2.79E-56 | -1.69E-46 |
| MS.gene051451 | MS.gene61543 | 0.805057 | 1.60E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene61543 | 0.829909 | 3.95E-55 | -1.69E-46 |
| MS.gene051746 | MS.gene61543 | 0.873358 | 1.56E-67 | -1.69E-46 |
| MS.gene051748 | MS.gene61543 | 0.872174 | 3.90E-67 | -1.69E-46 |
| MS.gene051756 | MS.gene61543 | 0.848539 | 5.75E-60 | -1.69E-46 |
| MS.gene051757 | MS.gene61543 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene051903 | MS.gene61543 | 0.917529 | 4.75E-86 | -1.69E-46 |
| MS.gene052286 | MS.gene61543 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene61543 | 0.835562 | 1.56E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene61543 | 0.821165 | 4.67E-53 | -1.69E-46 |
| MS.gene052479 | MS.gene61543 | 0.83042 | 2.97E-55 | -1.69E-46 |
| MS.gene052818 | MS.gene61543 | -0.835262 | 1.86E-56 | -1.69E-46 |
| MS.gene052947 | MS.gene61543 | 0.89646 | 3.61E-76 | -1.69E-46 |
| MS.gene053109 | MS.gene61543 | 0.830158 | 3.44E-55 | -1.69E-46 |
| MS.gene053294 | MS.gene61543 | 0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene61543 | 0.825683 | 4.10E-54 | -1.69E-46 |
| MS.gene054403 | MS.gene61543 | 0.864254 | 1.39E-64 | -1.69E-46 |
| MS.gene054699 | MS.gene61543 | 0.802091 | 6.61E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene61543 | 0.833425 | 5.37E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene61543 | 0.820589 | 6.33E-53 | -1.69E-46 |
| MS.gene055174 | MS.gene61543 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene61543 | 0.82898 | 6.65E-55 | -1.69E-46 |
| MS.gene055555 | MS.gene61543 | 0.858043 | 1.08E-62 | -1.69E-46 |
| MS.gene056075 | MS.gene61543 | 0.825793 | 3.86E-54 | -1.69E-46 |
| MS.gene056091 | MS.gene61543 | 0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene056580 | MS.gene61543 | 0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene056601 | MS.gene61543 | 0.830109 | 3.53E-55 | -1.69E-46 |
| MS.gene056631 | MS.gene61543 | 0.880354 | 5.88E-70 | -1.69E-46 |
| MS.gene056986 | MS.gene61543 | 0.823393 | 1.42E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene61543 | 0.830976 | 2.17E-55 | -1.69E-46 |
| MS.gene057079 | MS.gene61543 | 0.835064 | 2.09E-56 | -1.69E-46 |
| MS.gene057094 | MS.gene61543 | 0.85722 | 1.89E-62 | -1.69E-46 |
| MS.gene057140 | MS.gene61543 | 0.822713 | 2.04E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene61543 | 0.879821 | 9.11E-70 | -1.69E-46 |
| MS.gene057705 | MS.gene61543 | 0.870514 | 1.38E-66 | -1.69E-46 |
| MS.gene05781 | MS.gene61543 | 0.818826 | 1.60E-52 | -1.69E-46 |
| MS.gene05795 | MS.gene61543 | 0.830735 | 2.48E-55 | -1.69E-46 |
| MS.gene057999 | MS.gene61543 | 0.858127 | 1.02E-62 | -1.69E-46 |
| MS.gene058055 | MS.gene61543 | 0.836486 | 9.10E-57 | -1.69E-46 |
| MS.gene058074 | MS.gene61543 | 0.846029 | 2.81E-59 | -1.69E-46 |
| MS.gene058238 | MS.gene61543 | 0.879353 | 1.34E-69 | -1.69E-46 |
| MS.gene058906 | MS.gene61543 | 0.855477 | 6.15E-62 | -1.69E-46 |
| MS.gene059227 | MS.gene61543 | 0.819901 | 9.10E-53 | -1.69E-46 |
| MS.gene059317 | MS.gene61543 | 0.800598 | 1.34E-48 | -1.69E-46 |
| MS.gene059898 | MS.gene61543 | 0.856659 | 2.77E-62 | -1.69E-46 |
| MS.gene06001 | MS.gene61543 | 0.885172 | 1.02E-71 | -1.69E-46 |
| MS.gene06011 | MS.gene61543 | 0.848728 | 5.09E-60 | -1.69E-46 |
| MS.gene060429 | MS.gene61543 | 0.810162 | 1.32E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene61543 | 0.849366 | 3.39E-60 | -1.69E-46 |
| MS.gene060763 | MS.gene61543 | 0.826988 | 2.00E-54 | -1.69E-46 |
| MS.gene060917 | MS.gene61543 | 0.824997 | 5.96E-54 | -1.69E-46 |
| MS.gene06118 | MS.gene61543 | 0.842346 | 2.73E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61543.t1 | MTR_2g103690 | 99.320 | 147 | 1 | 0 | 1 | 147 | 1 | 147 | 5.07e-106 | 298 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61543.t1 | AT1G15370 | 87.671 | 146 | 18 | 0 | 1 | 146 | 1 | 146 | 1.32e-93 | 267 |
Find 36 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTACACTGGCGTTCTTTCT+TGG | 0.246824 | 2.1:+2100512 | MS.gene61543:CDS |
| CGCCGTTTCCTTGATAAGTA+TGG | 0.286828 | 2.1:+2102521 | MS.gene61543:CDS |
| ACTAGGAGCTGATAATCTTA+AGG | 0.380283 | 2.1:+2100539 | MS.gene61543:CDS |
| CAAGGAAACGGCGCTCAGTT+GGG | 0.381526 | 2.1:-2102511 | None:intergenic |
| TGGAAGAATTTGCTTGTGTT+TGG | 0.393493 | 2.1:+2102541 | MS.gene61543:CDS |
| CAGTGTAGGCGCTCCTCTGC+AGG | 0.428518 | 2.1:-2100498 | None:intergenic |
| TACAATAACCTCAGCTGTAA+AGG | 0.434603 | 2.1:+2102472 | MS.gene61543:CDS |
| CGTTCTTTCTTGGTCAAACT+AGG | 0.434756 | 2.1:+2100522 | MS.gene61543:CDS |
| CTAGGAGCTGATAATCTTAA+GGG | 0.435141 | 2.1:+2100540 | MS.gene61543:CDS |
| GAAGGGATATCTGGAAAATA+CGG | 0.437154 | 2.1:+2103055 | MS.gene61543:intron |
| AAATTCTTCCATACTTATCA+AGG | 0.445192 | 2.1:-2102529 | None:intergenic |
| TGTGTTTGGATGAAATTGTA+TGG | 0.456773 | 2.1:+2102555 | MS.gene61543:CDS |
| TCAAGGAAACGGCGCTCAGT+TGG | 0.462763 | 2.1:-2102512 | None:intergenic |
| TTCCATACTTATCAAGGAAA+CGG | 0.477616 | 2.1:-2102523 | None:intergenic |
| CTTACTTGTGGCAAGCAACT+AGG | 0.484838 | 2.1:-2100581 | None:intergenic |
| AAGGAAACGGCGCTCAGTTG+GGG | 0.501938 | 2.1:-2102510 | None:intergenic |
| GAGGATATTGCCCTCGGCGT+TGG | 0.506903 | 2.1:-2098243 | None:intergenic |
| CTCATTCAAAACTCAGTAGG+AGG | 0.512002 | 2.1:-2103113 | None:intergenic |
| ATAGAATCAAGAGATTGATA+AGG | 0.521125 | 2.1:+2103084 | MS.gene61543:CDS |
| GATGTCAGTATATACGTTGT+GGG | 0.529870 | 2.1:+2101211 | MS.gene61543:CDS |
| TTTCTCATTCAAAACTCAGT+AGG | 0.534349 | 2.1:-2103116 | None:intergenic |
| TCAGCTGTAAAGGATGTATG+TGG | 0.535855 | 2.1:+2102482 | MS.gene61543:CDS |
| TATATTGTATACACAGTACT+TGG | 0.537335 | 2.1:+2101187 | MS.gene61543:CDS |
| CAGTATATACGTTGTGGGGA+AGG | 0.538675 | 2.1:+2101216 | MS.gene61543:CDS |
| CTGCAGAGGAGCGCCTACAC+TGG | 0.552563 | 2.1:+2100499 | MS.gene61543:CDS |
| TTTGGATGAAATTGTATGGA+AGG | 0.577163 | 2.1:+2102559 | MS.gene61543:CDS |
| TTCGATGAGGATATTGCCCT+CGG | 0.588896 | 2.1:-2098249 | None:intergenic |
| AGATGTCAGTATATACGTTG+TGG | 0.591952 | 2.1:+2101210 | MS.gene61543:CDS |
| CCAAGAAAGAACGCCAGTGT+AGG | 0.602222 | 2.1:-2100512 | None:intergenic |
| ATGTCAGTATATACGTTGTG+GGG | 0.608096 | 2.1:+2101212 | MS.gene61543:CDS |
| AGGAAACGGCGCTCAGTTGG+GGG | 0.618275 | 2.1:-2102509 | None:intergenic |
| ACATACATCCTTTACAGCTG+AGG | 0.624977 | 2.1:-2102480 | None:intergenic |
| CAGCTGTAAAGGATGTATGT+GGG | 0.637321 | 2.1:+2102483 | MS.gene61543:CDS |
| AGTGTACTCACCGTTCGATG+AGG | 0.647564 | 2.1:-2098262 | None:intergenic |
| AAAACGGAATATGATCCTTG+CGG | 0.685453 | 2.1:+2098211 | None:intergenic |
| AGGGCAATATCCTCATCGAA+CGG | 0.685734 | 2.1:+2098252 | MS.gene61543:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATCATTAATGAAAAATT+TGG | + | chr2.1:2100916-2100935 | MS.gene61543:intron | 10.0% |
| !! | TTAAATTTATTCAAATAAGA+CGG | - | chr2.1:2102825-2102844 | None:intergenic | 10.0% |
| !! | AATAAAAAGATGATAAAATG+AGG | - | chr2.1:2098331-2098350 | None:intergenic | 15.0% |
| !! | ACATATTTAATCAAAAAACA+AGG | + | chr2.1:2102239-2102258 | MS.gene61543:intron | 15.0% |
| !! | TATCCTATTAGAAATAAATA+GGG | + | chr2.1:2101482-2101501 | MS.gene61543:intron | 15.0% |
| !! | TTAAATATGTATACTATTCT+TGG | - | chr2.1:2102229-2102248 | None:intergenic | 15.0% |
| !!! | GTTTGAAATTTTGATTATAT+TGG | + | chr2.1:2098394-2098413 | MS.gene61543:intron | 15.0% |
| !!! | TATTAAACAGTATTTTATGT+TGG | - | chr2.1:2099716-2099735 | None:intergenic | 15.0% |
| !!! | TTTGACTATGTTTTAATTTT+GGG | + | chr2.1:2099855-2099874 | MS.gene61543:intron | 15.0% |
| !!! | TTTTGACTATGTTTTAATTT+TGG | + | chr2.1:2099854-2099873 | MS.gene61543:intron | 15.0% |
| !!! | TTTTTTTTGTTTTGAAAACT+CGG | + | chr2.1:2099268-2099287 | MS.gene61543:intron | 15.0% |
| !! | AAAATGTATCATGTATAATC+TGG | - | chr2.1:2098710-2098729 | None:intergenic | 20.0% |
| !! | AAATGTTGTTAGAAAGTAAA+TGG | + | chr2.1:2100353-2100372 | MS.gene61543:intron | 20.0% |
| !! | AATAACTAAAATTTAGTCCT+TGG | - | chr2.1:2100722-2100741 | None:intergenic | 20.0% |
| !! | AGGATAATATTAGTAAAGTA+AGG | - | chr2.1:2099655-2099674 | None:intergenic | 20.0% |
| !! | AGTATTCTATCTTTGTAATT+GGG | - | chr2.1:2101514-2101533 | None:intergenic | 20.0% |
| !! | ATAAATCACTGTTTACTAAA+AGG | - | chr2.1:2101130-2101149 | None:intergenic | 20.0% |
| !! | ATGAAAACAACTTAAGATTT+AGG | - | chr2.1:2098466-2098485 | None:intergenic | 20.0% |
| !! | GTATCCTATTAGAAATAAAT+AGG | + | chr2.1:2101481-2101500 | MS.gene61543:intron | 20.0% |
| !! | TAAATCACTGTTTACTAAAA+GGG | - | chr2.1:2101129-2101148 | None:intergenic | 20.0% |
| !! | TAACAAAAGATAAAATGAAG+TGG | - | chr2.1:2098558-2098577 | None:intergenic | 20.0% |
| !! | TAGTATTCTATCTTTGTAAT+TGG | - | chr2.1:2101515-2101534 | None:intergenic | 20.0% |
| !! | TGAAAACAACTTAAGATTTA+GGG | - | chr2.1:2098465-2098484 | None:intergenic | 20.0% |
| !! | TGTCATCAAATAAAAAAGAT+TGG | - | chr2.1:2101279-2101298 | None:intergenic | 20.0% |
| !! | TTATTAGAATTCTATTTGCA+AGG | + | chr2.1:2100737-2100756 | MS.gene61543:intron | 20.0% |
| !! | TTCATATAAACAGATTTCAA+CGG | - | chr2.1:2100771-2100790 | None:intergenic | 20.0% |
| !! | TTTCATGATGTTTAAATTTC+AGG | + | chr2.1:2099799-2099818 | MS.gene61543:intron | 20.0% |
| !!! | ATGTGTTGATTATATTTTGT+TGG | + | chr2.1:2101790-2101809 | MS.gene61543:intron | 20.0% |
| !!! | ATTTATTTCTAATAGGATAC+AGG | - | chr2.1:2101481-2101500 | None:intergenic | 20.0% |
| !!! | GACATAATTTTCAAAAATGA+AGG | - | chr2.1:2101081-2101100 | None:intergenic | 20.0% |
| !!! | GGATGTTTTTTTTAATTTCA+TGG | + | chr2.1:2099767-2099786 | MS.gene61543:intron | 20.0% |
| !!! | TTGTTATTTAAGAGAGAATT+GGG | - | chr2.1:2101576-2101595 | None:intergenic | 20.0% |
| !!! | TTTATTTCTAATAGGATACA+GGG | - | chr2.1:2101480-2101499 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATGACAGTAAA+TGG | + | chr2.1:2101284-2101303 | MS.gene61543:intron | 20.0% |
| ! | AAAAATTTGGAAAAGAGTTG+TGG | + | chr2.1:2100929-2100948 | MS.gene61543:intron | 25.0% |
| ! | AAATATCAGAGAATACACTA+TGG | + | chr2.1:2099240-2099259 | MS.gene61543:intron | 25.0% |
| ! | AAATTCTTCCATACTTATCA+AGG | - | chr2.1:2102532-2102551 | None:intergenic | 25.0% |
| ! | AATGATTGATGAATGAATCT+TGG | + | chr2.1:2099974-2099993 | MS.gene61543:intron | 25.0% |
| ! | ATAGAATCAAGAGATTGATA+AGG | + | chr2.1:2103084-2103103 | MS.gene61543:CDS | 25.0% |
| ! | ATGGATAAATTACCTTATCT+AGG | + | chr2.1:2100662-2100681 | MS.gene61543:intron | 25.0% |
| ! | ATTTCTCTTTAATCAGATTG+AGG | + | chr2.1:2099164-2099183 | MS.gene61543:intron | 25.0% |
| ! | CAAAATATAATCAACACATC+AGG | - | chr2.1:2101789-2101808 | None:intergenic | 25.0% |
| ! | CATAAAATGATGTTTCTCTA+AGG | - | chr2.1:2102667-2102686 | None:intergenic | 25.0% |
| ! | CTAAGGTAAGTAAAATGAAT+GGG | - | chr2.1:2102650-2102669 | None:intergenic | 25.0% |
| ! | GATGATAAACTAGCTATTAA+AGG | + | chr2.1:2102072-2102091 | MS.gene61543:intron | 25.0% |
| ! | GTATTCTATCTTTGTAATTG+GGG | - | chr2.1:2101513-2101532 | None:intergenic | 25.0% |
| ! | TATATTGTATACACAGTACT+TGG | + | chr2.1:2101187-2101206 | MS.gene61543:CDS | 25.0% |
| ! | TCTGATATTTATTGTATCAC+TGG | - | chr2.1:2099230-2099249 | None:intergenic | 25.0% |
| ! | TTCTACTTCTTATCTTTATC+AGG | + | chr2.1:2101158-2101177 | MS.gene61543:intron | 25.0% |
| ! | TTTCTCTATCGCAATTAAAA+GGG | + | chr2.1:2099410-2099429 | MS.gene61543:intron | 25.0% |
| ! | TTTCTCTTTAATCAGATTGA+GGG | + | chr2.1:2099165-2099184 | MS.gene61543:intron | 25.0% |
| !! | AAAATGAAGTGGAATTGTTT+TGG | - | chr2.1:2098547-2098566 | None:intergenic | 25.0% |
| !! | AAGTTTTGCATGAAAATATG+GGG | - | chr2.1:2102891-2102910 | None:intergenic | 25.0% |
| !! | AATTTTACTTTGTATGTGAG+TGG | - | chr2.1:2100331-2100350 | None:intergenic | 25.0% |
| !! | AGTTCTGATAATCAAAAAGT+TGG | - | chr2.1:2100442-2100461 | None:intergenic | 25.0% |
| !! | ATCTTTTACTAAACATTGTC+CGG | - | chr2.1:2102597-2102616 | None:intergenic | 25.0% |
| !! | CAAGTTTTGCATGAAAATAT+GGG | - | chr2.1:2102892-2102911 | None:intergenic | 25.0% |
| !! | CTAGTTTATCATCTTTTCTA+GGG | - | chr2.1:2102065-2102084 | None:intergenic | 25.0% |
| !! | GAAGCTTTAATAAAATACCT+TGG | - | chr2.1:2099142-2099161 | None:intergenic | 25.0% |
| !! | TCTAAGGTAAGTAAAATGAA+TGG | - | chr2.1:2102651-2102670 | None:intergenic | 25.0% |
| !! | TGTTATTTAAGAGAGAATTG+GGG | - | chr2.1:2101575-2101594 | None:intergenic | 25.0% |
| !! | TTTTCTCTATCGCAATTAAA+AGG | + | chr2.1:2099409-2099428 | MS.gene61543:intron | 25.0% |
| !!! | ATCTGTTACTGATTTTTGAT+GGG | - | chr2.1:2100988-2101007 | None:intergenic | 25.0% |
| !!! | CTTGTTATTTAAGAGAGAAT+TGG | - | chr2.1:2101577-2101596 | None:intergenic | 25.0% |
| !!! | GCTATTATCATATTAGTCTT+AGG | - | chr2.1:2098671-2098690 | None:intergenic | 25.0% |
| !!! | GGTTTAGCTTGATTTTTAAT+AGG | + | chr2.1:2098415-2098434 | MS.gene61543:intron | 25.0% |
| !!! | GTTTCTTTTTTGAAAAACAG+TGG | + | chr2.1:2100198-2100217 | MS.gene61543:intron | 25.0% |
| !!! | TAATTTTGGGATGTTCTTTT+TGG | + | chr2.1:2099868-2099887 | MS.gene61543:intron | 25.0% |
| !!! | TATCTGTTACTGATTTTTGA+TGG | - | chr2.1:2100989-2101008 | None:intergenic | 25.0% |
| !!! | TGTCCCTATTTATTTCTAAT+AGG | - | chr2.1:2101488-2101507 | None:intergenic | 25.0% |
| !!! | TGTTTTAATTTCAGTTTGCA+TGG | + | chr2.1:2099823-2099842 | MS.gene61543:intron | 25.0% |
| AAAAAATATCCGACCTTGTT+TGG | + | chr2.1:2099517-2099536 | MS.gene61543:intron | 30.0% | |
| AAAATCCATATCACATGTAG+GGG | + | chr2.1:2099439-2099458 | MS.gene61543:intron | 30.0% | |
| AAACATTCAAACACAAACCA+AGG | + | chr2.1:2099122-2099141 | MS.gene61543:intron | 30.0% | |
| AAATTGCAATTTCAAACCCT+TGG | - | chr2.1:2102348-2102367 | None:intergenic | 30.0% | |
| AACTTTATCTGATTCTGAAC+TGG | + | chr2.1:2100695-2100714 | MS.gene61543:intron | 30.0% | |
| AATATAATCAACACATCAGG+AGG | - | chr2.1:2101786-2101805 | None:intergenic | 30.0% | |
| AATTCATTGCTAAACGAGAA+TGG | - | chr2.1:2102039-2102058 | None:intergenic | 30.0% | |
| AATTCTATTTGCAAGGTTAG+TGG | + | chr2.1:2100744-2100763 | MS.gene61543:intron | 30.0% | |
| AGACTAATATGATAATAGCC+TGG | + | chr2.1:2098672-2098691 | MS.gene61543:intron | 30.0% | |
| AGAGAAGCTTGCAAAAATTA+AGG | - | chr2.1:2101995-2102014 | None:intergenic | 30.0% | |
| AGATGCAAAAAGATACAGAT+TGG | - | chr2.1:2102956-2102975 | None:intergenic | 30.0% | |
| ATCCCTTCAAAAGAAATACA+GGG | - | chr2.1:2103043-2103062 | None:intergenic | 30.0% | |
| ATGAAACACTAGAAATGAAC+GGG | - | chr2.1:2099197-2099216 | None:intergenic | 30.0% | |
| ATTAAGGCAATAGATCGAAA+AGG | - | chr2.1:2101979-2101998 | None:intergenic | 30.0% | |
| ATTCTATTTGCAAGGTTAGT+GGG | + | chr2.1:2100745-2100764 | MS.gene61543:intron | 30.0% | |
| CAAAATAAGTTGTTTATCCG+AGG | + | chr2.1:2098619-2098638 | MS.gene61543:intron | 30.0% | |
| CAAAATCCATATCACATGTA+GGG | + | chr2.1:2099438-2099457 | MS.gene61543:intron | 30.0% | |
| CATGAAACACTAGAAATGAA+CGG | - | chr2.1:2099198-2099217 | None:intergenic | 30.0% | |
| GACTAATATGATAATAGCCT+GGG | + | chr2.1:2098673-2098692 | MS.gene61543:intron | 30.0% | |
| GATAGAATACTACAGAACTT+CGG | + | chr2.1:2101523-2101542 | MS.gene61543:intron | 30.0% | |
| GTATGAATGTGTATCTTACA+TGG | + | chr2.1:2100643-2100662 | MS.gene61543:intron | 30.0% | |
| TAACAGAGAAGAATCAAACT+TGG | - | chr2.1:2101824-2101843 | None:intergenic | 30.0% | |
| TACTAAACATAACATCTCCT+CGG | - | chr2.1:2098639-2098658 | None:intergenic | 30.0% | |
| TATATAGATCAGAGAGAGAT+CGG | - | chr2.1:2098288-2098307 | None:intergenic | 30.0% | |
| TATCCCTTCAAAAGAAATAC+AGG | - | chr2.1:2103044-2103063 | None:intergenic | 30.0% | |
| TATCTGAGAGAACTTAGATT+CGG | - | chr2.1:2099030-2099049 | None:intergenic | 30.0% | |
| TATTAGTAAAGTAAGGAGTG+TGG | - | chr2.1:2099648-2099667 | None:intergenic | 30.0% | |
| TCAAAATCCATATCACATGT+AGG | + | chr2.1:2099437-2099456 | MS.gene61543:intron | 30.0% | |
| TCGTTCATATTGTGATTTGA+TGG | + | chr2.1:2102266-2102285 | MS.gene61543:intron | 30.0% | |
| TGGAACTCTATTCTTATTCT+TGG | - | chr2.1:2098977-2098996 | None:intergenic | 30.0% | |
| TGTGTTTGGATGAAATTGTA+TGG | + | chr2.1:2102555-2102574 | MS.gene61543:CDS | 30.0% | |
| TTATACATAAGCGCTTATCA+TGG | + | chr2.1:2098588-2098607 | MS.gene61543:intron | 30.0% | |
| TTCCATACTTATCAAGGAAA+CGG | - | chr2.1:2102526-2102545 | None:intergenic | 30.0% | |
| TTCTCTTTAATCAGATTGAG+GGG | + | chr2.1:2099166-2099185 | MS.gene61543:intron | 30.0% | |
| TTGCCTATAAATAACAAGAG+TGG | - | chr2.1:2101617-2101636 | None:intergenic | 30.0% | |
| TTTGGATGAAATTGTATGGA+AGG | + | chr2.1:2102559-2102578 | MS.gene61543:CDS | 30.0% | |
| ! | AACCTACATTGTTGATGAAA+GGG | - | chr2.1:2101695-2101714 | None:intergenic | 30.0% |
| ! | AACTTACAAAGAAGTGCAAA+TGG | - | chr2.1:2098942-2098961 | None:intergenic | 30.0% |
| ! | AAGGGTTTGAAATTGCAATT+TGG | + | chr2.1:2102347-2102366 | MS.gene61543:intron | 30.0% |
| ! | ACTTACAAAGAAGTGCAAAT+GGG | - | chr2.1:2098941-2098960 | None:intergenic | 30.0% |
| ! | CCAAGTTTTGCATGAAAATA+TGG | - | chr2.1:2102893-2102912 | None:intergenic | 30.0% |
| ! | CCATATTTTCATGCAAAACT+TGG | + | chr2.1:2102890-2102909 | MS.gene61543:intron | 30.0% |
| ! | TGTTAGAAAGTAAATGGACT+TGG | + | chr2.1:2100359-2100378 | MS.gene61543:intron | 30.0% |
| ! | TGTTATGATTGCAGTTTTCA+TGG | + | chr2.1:2100471-2100490 | MS.gene61543:intron | 30.0% |
| ! | TTCCCTGTATTTCTTTTGAA+GGG | + | chr2.1:2103038-2103057 | MS.gene61543:intron | 30.0% |
| ! | TTTCCCTGTATTTCTTTTGA+AGG | + | chr2.1:2103037-2103056 | MS.gene61543:intron | 30.0% |
| !! | AGCATATTGTTATTTCACCA+AGG | + | chr2.1:2102328-2102347 | MS.gene61543:intron | 30.0% |
| !! | ATTTCTTTTGAAGGGATATC+TGG | + | chr2.1:2103046-2103065 | MS.gene61543:intron | 30.0% |
| !! | GCATATTGTTATTTCACCAA+GGG | + | chr2.1:2102329-2102348 | MS.gene61543:intron | 30.0% |
| !! | GCTAGTTTATCATCTTTTCT+AGG | - | chr2.1:2102066-2102085 | None:intergenic | 30.0% |
| !! | TTTTGATTATCAGAACTGAG+TGG | + | chr2.1:2100445-2100464 | MS.gene61543:intron | 30.0% |
| !!! | AACAAGGTCGGATATTTTTT+CGG | - | chr2.1:2099517-2099536 | None:intergenic | 30.0% |
| AACAATATGCTTGAGTCACT+CGG | - | chr2.1:2102319-2102338 | None:intergenic | 35.0% | |
| AATAATCAGAACTGCAGACA+AGG | - | chr2.1:2101735-2101754 | None:intergenic | 35.0% | |
| AATGATGCATGTATGGATCA+TGG | + | chr2.1:2099911-2099930 | MS.gene61543:intron | 35.0% | |
| ACATTCACTTTCTCTCATCT+TGG | + | chr2.1:2099735-2099754 | MS.gene61543:intron | 35.0% | |
| ACTAGGAGCTGATAATCTTA+AGG | + | chr2.1:2100539-2100558 | MS.gene61543:CDS | 35.0% | |
| AGAAAAGATAGAAGCTACCT+AGG | - | chr2.1:2099395-2099414 | None:intergenic | 35.0% | |
| AGAAACCGAACCAAACTAAT+CGG | - | chr2.1:2100184-2100203 | None:intergenic | 35.0% | |
| AGATGTCAGTATATACGTTG+TGG | + | chr2.1:2101210-2101229 | MS.gene61543:CDS | 35.0% | |
| AGTTAGAAAAGCTAGCTATC+AGG | + | chr2.1:2102141-2102160 | MS.gene61543:intron | 35.0% | |
| ATGAAACCGATAGTCTAAAC+CGG | + | chr2.1:2099485-2099504 | MS.gene61543:intron | 35.0% | |
| ATGTCAGTATATACGTTGTG+GGG | + | chr2.1:2101212-2101231 | MS.gene61543:CDS | 35.0% | |
| CAATTGAAACCAGTCTAGTT+TGG | + | chr2.1:2099563-2099582 | MS.gene61543:intron | 35.0% | |
| CAGTAACAGATACAAGATTG+TGG | + | chr2.1:2100997-2101016 | MS.gene61543:intron | 35.0% | |
| CTAGGAGCTGATAATCTTAA+GGG | + | chr2.1:2100540-2100559 | MS.gene61543:CDS | 35.0% | |
| CTCTCATCTTGGATTTAGTT+TGG | + | chr2.1:2099746-2099765 | MS.gene61543:intron | 35.0% | |
| GAAAAGATAGAAGCTACCTA+GGG | - | chr2.1:2099394-2099413 | None:intergenic | 35.0% | |
| GAAGGGATATCTGGAAAATA+CGG | + | chr2.1:2103055-2103074 | MS.gene61543:intron | 35.0% | |
| GAATCTAAGTTCTCTCAGAT+AGG | + | chr2.1:2099029-2099048 | MS.gene61543:intron | 35.0% | |
| GATGTCAGTATATACGTTGT+GGG | + | chr2.1:2101211-2101230 | MS.gene61543:CDS | 35.0% | |
| GCTATTAAAGGATACTCTTG+CGG | + | chr2.1:2102084-2102103 | MS.gene61543:intron | 35.0% | |
| TACAATAACCTCAGCTGTAA+AGG | + | chr2.1:2102472-2102491 | MS.gene61543:CDS | 35.0% | |
| TCTAACCATAAGTTTGTGTG+AGG | - | chr2.1:2099679-2099698 | None:intergenic | 35.0% | |
| TTGAAAACTCGGCAACATTA+TGG | + | chr2.1:2099279-2099298 | MS.gene61543:intron | 35.0% | |
| TTGACAGCTTACGAACATAT+AGG | - | chr2.1:2102378-2102397 | None:intergenic | 35.0% | |
| TTGGAAAAGAGTTGTGGAAA+TGG | + | chr2.1:2100935-2100954 | MS.gene61543:intron | 35.0% | |
| ! | CTTACAAAGAAGTGCAAATG+GGG | - | chr2.1:2098940-2098959 | None:intergenic | 35.0% |
| ! | GAACCTACATTGTTGATGAA+AGG | - | chr2.1:2101696-2101715 | None:intergenic | 35.0% |
| ! | GAATGCATTTTCAGAAACAC+TGG | - | chr2.1:2099370-2099389 | None:intergenic | 35.0% |
| ! | GTTGATGAATGATGCATGTA+TGG | + | chr2.1:2099904-2099923 | MS.gene61543:intron | 35.0% |
| ! | TACCTAGGCTTTATCTGATA+GGG | - | chr2.1:2098783-2098802 | None:intergenic | 35.0% |
| ! | TGGAAGAATTTGCTTGTGTT+TGG | + | chr2.1:2102541-2102560 | MS.gene61543:CDS | 35.0% |
| ! | TTAAAGTGCTCACCTAGATA+AGG | - | chr2.1:2100677-2100696 | None:intergenic | 35.0% |
| ! | TTACCTAGGCTTTATCTGAT+AGG | - | chr2.1:2098784-2098803 | None:intergenic | 35.0% |
| ! | TTGTCTGCAGTTCTGATTAT+TGG | + | chr2.1:2101734-2101753 | MS.gene61543:intron | 35.0% |
| ! | TTTCAGCGTTTTCTTTGATC+TGG | + | chr2.1:2098366-2098385 | MS.gene61543:intron | 35.0% |
| !! | ACTTGGAACTTTTTCTTGTG+TGG | + | chr2.1:2100376-2100395 | MS.gene61543:intron | 35.0% |
| !! | CAAACTAGACTGGTTTCAAT+TGG | - | chr2.1:2099565-2099584 | None:intergenic | 35.0% |
| !! | CGACCACTCTTGTTATTTAT+AGG | + | chr2.1:2101611-2101630 | MS.gene61543:intron | 35.0% |
| !! | GTTTAGACTATCGGTTTCAT+TGG | - | chr2.1:2099485-2099504 | None:intergenic | 35.0% |
| !! | TAGACTGGTTTCAATTGGTT+CGG | - | chr2.1:2099560-2099579 | None:intergenic | 35.0% |
| !! | TTATCATCGGATTGGTTCAT+CGG | - | chr2.1:2099625-2099644 | None:intergenic | 35.0% |
| !!! | ATCTGGTTTTCTAATTTCCC+AGG | - | chr2.1:2098693-2098712 | None:intergenic | 35.0% |
| !!! | GATATTTTTTCGGTTTGGTC+CGG | - | chr2.1:2099507-2099526 | None:intergenic | 35.0% |
| !!! | GTTTTGTTTTTCTCCAGTGT+CGG | + | chr2.1:2102439-2102458 | MS.gene61543:intron | 35.0% |
| AAACTCCTCTTTCGCAACAA+TGG | - | chr2.1:2102995-2103014 | None:intergenic | 40.0% | |
| AAATAACAAGAGTGGTCGAG+AGG | - | chr2.1:2101609-2101628 | None:intergenic | 40.0% | |
| AAGAGAGAATTGGGGACTTT+GGG | - | chr2.1:2101567-2101586 | None:intergenic | 40.0% | |
| AATAACAAGAGTGGTCGAGA+GGG | - | chr2.1:2101608-2101627 | None:intergenic | 40.0% | |
| ACATACATCCTTTACAGCTG+AGG | - | chr2.1:2102483-2102502 | None:intergenic | 40.0% | |
| ACCATAAGTTTGTGTGAGGT+AGG | - | chr2.1:2099675-2099694 | None:intergenic | 40.0% | |
| AGCCCTTTCATCAACAATGT+AGG | + | chr2.1:2101690-2101709 | MS.gene61543:intron | 40.0% | |
| AGCTATCAGGTGAACTAGTA+GGG | + | chr2.1:2102154-2102173 | MS.gene61543:intron | 40.0% | |
| AGTTCGCAACTTAGCTTAAG+TGG | - | chr2.1:2098997-2099016 | None:intergenic | 40.0% | |
| ATGGGAAATATTGTGCAGGA+TGG | - | chr2.1:2101914-2101933 | None:intergenic | 40.0% | |
| CAGCTGTAAAGGATGTATGT+GGG | + | chr2.1:2102483-2102502 | MS.gene61543:CDS | 40.0% | |
| CCAAGTATCTTCTACAATGC+AGG | - | chr2.1:2100417-2100436 | None:intergenic | 40.0% | |
| CCTGCATTGTAGAAGATACT+TGG | + | chr2.1:2100414-2100433 | MS.gene61543:intron | 40.0% | |
| CGTTCTTTCTTGGTCAAACT+AGG | + | chr2.1:2100522-2100541 | MS.gene61543:CDS | 40.0% | |
| CTGGAATGACATGTGATTAG+GGG | - | chr2.1:2100308-2100327 | None:intergenic | 40.0% | |
| GAGAGCAGTATACTTACTTG+TGG | - | chr2.1:2100596-2100615 | None:intergenic | 40.0% | |
| GCTGGAATGACATGTGATTA+GGG | - | chr2.1:2100309-2100328 | None:intergenic | 40.0% | |
| GGTAACAAGGTTAGGTAGTT+GGG | - | chr2.1:2101667-2101686 | None:intergenic | 40.0% | |
| GTTTCAAACCGAACCAAACA+AGG | - | chr2.1:2099533-2099552 | None:intergenic | 40.0% | |
| TAAGAGAGAATTGGGGACTT+TGG | - | chr2.1:2101568-2101587 | None:intergenic | 40.0% | |
| TAGCTATCAGGTGAACTAGT+AGG | + | chr2.1:2102153-2102172 | MS.gene61543:intron | 40.0% | |
| TCAGCTGTAAAGGATGTATG+TGG | + | chr2.1:2102482-2102501 | MS.gene61543:CDS | 40.0% | |
| TCATTGCTAAACGAGAATGG+TGG | - | chr2.1:2102036-2102055 | None:intergenic | 40.0% | |
| TCCTACCTCACACAAACTTA+TGG | + | chr2.1:2099671-2099690 | MS.gene61543:intron | 40.0% | |
| TCTGAAAATGCATTCTCCCT+AGG | + | chr2.1:2099375-2099394 | MS.gene61543:intron | 40.0% | |
| TGAACCAAACCAAACTAGAC+TGG | - | chr2.1:2099575-2099594 | None:intergenic | 40.0% | |
| TGGTAACAAGGTTAGGTAGT+TGG | - | chr2.1:2101668-2101687 | None:intergenic | 40.0% | |
| TGGTATGGGAAATATTGTGC+AGG | - | chr2.1:2101918-2101937 | None:intergenic | 40.0% | |
| TTACACCCCTACATGTGATA+TGG | - | chr2.1:2099447-2099466 | None:intergenic | 40.0% | |
| TTACTTTGTATGTGAGTGGC+TGG | - | chr2.1:2100327-2100346 | None:intergenic | 40.0% | |
| TTCTCCTCATGCTGTCAATT+GGG | + | chr2.1:2101872-2101891 | MS.gene61543:intron | 40.0% | |
| TTTGGTCCGGTTTAGACTAT+CGG | - | chr2.1:2099494-2099513 | None:intergenic | 40.0% | |
| ! | ACATGTGATTAGGGGTGTAA+CGG | - | chr2.1:2100300-2100319 | None:intergenic | 40.0% |
| ! | ACCTAGGCTTTATCTGATAG+GGG | - | chr2.1:2098782-2098801 | None:intergenic | 40.0% |
| ! | ATATCCGACCTTGTTTGGTT+CGG | + | chr2.1:2099522-2099541 | MS.gene61543:intron | 40.0% |
| ! | ATTGTTGATGAAAGGGCTGT+TGG | - | chr2.1:2101688-2101707 | None:intergenic | 40.0% |
| ! | CTCTTGCGGTGTTGAAAATA+TGG | + | chr2.1:2102098-2102117 | MS.gene61543:intron | 40.0% |
| ! | GAAACCAGTCTAGTTTGGTT+TGG | + | chr2.1:2099568-2099587 | MS.gene61543:intron | 40.0% |
| ! | GCTTGTTAGTCAAGCTTTGA+AGG | + | chr2.1:2098858-2098877 | MS.gene61543:intron | 40.0% |
| ! | GTAAGGAGTGTGGTTATCAT+CGG | - | chr2.1:2099638-2099657 | None:intergenic | 40.0% |
| !! | AAACGAGAATGGTGGATTGA+GGG | - | chr2.1:2102028-2102047 | None:intergenic | 40.0% |
| !! | CCAAACCGATTAGTTTGGTT+CGG | + | chr2.1:2100176-2100195 | MS.gene61543:intron | 40.0% |
| !! | CCAAACTAATCGGTTTGGTT+CGG | - | chr2.1:2100174-2100193 | None:intergenic | 40.0% |
| !! | GTCTAGTTTGGTTTGGTTCA+TGG | + | chr2.1:2099575-2099594 | MS.gene61543:intron | 40.0% |
| !! | TAAACGAGAATGGTGGATTG+AGG | - | chr2.1:2102029-2102048 | None:intergenic | 40.0% |
| !! | TGGTTTCAATTGGTTCGGAT+CGG | - | chr2.1:2099555-2099574 | None:intergenic | 40.0% |
| !! | TTTGGATTGGTTCGGTTGAT+CGG | - | chr2.1:2100151-2100170 | None:intergenic | 40.0% |
| !!! | GGACGCTAGTTTTATGGTAT+GGG | - | chr2.1:2101932-2101951 | None:intergenic | 40.0% |
| !!! | GGTCGGATATTTTTTCGGTT+TGG | - | chr2.1:2099512-2099531 | None:intergenic | 40.0% |
| !!! | TGGACGCTAGTTTTATGGTA+TGG | - | chr2.1:2101933-2101952 | None:intergenic | 40.0% |
| AAGTCTAGTGCGCTTTACCT+AGG | - | chr2.1:2098798-2098817 | None:intergenic | 45.0% | |
| ACGTACACATGACTTGAGAG+AGG | - | chr2.1:2100620-2100639 | None:intergenic | 45.0% | |
| AGGGCAATATCCTCATCGAA+CGG | + | chr2.1:2098252-2098271 | MS.gene61543:CDS | 45.0% | |
| CAAACCGAACCAAACAAGGT+CGG | - | chr2.1:2099529-2099548 | None:intergenic | 45.0% | |
| CAGTATATACGTTGTGGGGA+AGG | + | chr2.1:2101216-2101235 | MS.gene61543:CDS | 45.0% | |
| CCGAACCAAACTAATCGGTT+TGG | - | chr2.1:2100179-2100198 | None:intergenic | 45.0% | |
| CGAACCGATGAAACCTTCAT+CGG | - | chr2.1:2100242-2100261 | None:intergenic | 45.0% | |
| CGAACCGATGAAGGTTTCAT+CGG | + | chr2.1:2100235-2100254 | MS.gene61543:intron | 45.0% | |
| CGCCGTTTCCTTGATAAGTA+TGG | + | chr2.1:2102521-2102540 | MS.gene61543:CDS | 45.0% | |
| CTGTTCCATTGTTGCGAAAG+AGG | + | chr2.1:2102987-2103006 | MS.gene61543:intron | 45.0% | |
| CTTACTTGTGGCAAGCAACT+AGG | - | chr2.1:2100584-2100603 | None:intergenic | 45.0% | |
| CTTCTCCTCATGCTGTCAAT+TGG | + | chr2.1:2101871-2101890 | MS.gene61543:intron | 45.0% | |
| CTTTCGCAACAATGGAACAG+AGG | - | chr2.1:2102987-2103006 | None:intergenic | 45.0% | |
| GAAACAGAGCAACAGTGTTG+TGG | - | chr2.1:2101957-2101976 | None:intergenic | 45.0% | |
| GAGTGTGGTTATCATCGGAT+TGG | - | chr2.1:2099633-2099652 | None:intergenic | 45.0% | |
| GCAATGTAAGCTGCAAGCTT+AGG | + | chr2.1:2098888-2098907 | MS.gene61543:intron | 45.0% | |
| GCAGGATGGACAAGATTCTA+GGG | - | chr2.1:2101900-2101919 | None:intergenic | 45.0% | |
| GCTATCAGGTGAACTAGTAG+GGG | + | chr2.1:2102155-2102174 | MS.gene61543:intron | 45.0% | |
| GGCTGGAATGACATGTGATT+AGG | - | chr2.1:2100310-2100329 | None:intergenic | 45.0% | |
| GTAAAGATAACCTCCGACAC+TGG | - | chr2.1:2102455-2102474 | None:intergenic | 45.0% | |
| TAGGTAAAGCGCACTAGACT+TGG | + | chr2.1:2098797-2098816 | MS.gene61543:intron | 45.0% | |
| TCTGATTCTGAACTGGTCCA+AGG | + | chr2.1:2100702-2100721 | MS.gene61543:intron | 45.0% | |
| TGCAGGATGGACAAGATTCT+AGG | - | chr2.1:2101901-2101920 | None:intergenic | 45.0% | |
| TTCGATGAGGATATTGCCCT+CGG | - | chr2.1:2098252-2098271 | None:intergenic | 45.0% | |
| ! | ATCACATGTAGGGGTGTAAG+CGG | + | chr2.1:2099448-2099467 | MS.gene61543:intron | 45.0% |
| ! | CCGAACCAAACCGATTAGTT+TGG | + | chr2.1:2100171-2100190 | MS.gene61543:intron | 45.0% |
| ! | CGATGAAACCTTCATCGGTT+CGG | - | chr2.1:2100237-2100256 | None:intergenic | 45.0% |
| ! | CGATGAAGGTTTCATCGGTT+CGG | + | chr2.1:2100240-2100259 | MS.gene61543:intron | 45.0% |
| ! | TGATTAGGGGTGTAACGGTT+CGG | - | chr2.1:2100295-2100314 | None:intergenic | 45.0% |
| ! | TTTTCATGGAGTTCCTGCAG+AGG | + | chr2.1:2100485-2100504 | MS.gene61543:CDS | 45.0% |
| !! | AAACCTTCATCGGTTCGGTT+TGG | - | chr2.1:2100232-2100251 | None:intergenic | 45.0% |
| !! | AACGAGAATGGTGGATTGAG+GGG | - | chr2.1:2102027-2102046 | None:intergenic | 45.0% |
| !! | CTAATCGGTTTGGTTCGGTT+TGG | - | chr2.1:2100169-2100188 | None:intergenic | 45.0% |
| !! | GGATTGGTTCATCGGTTTCA+CGG | - | chr2.1:2099617-2099636 | None:intergenic | 45.0% |
| !! | TGAAAGGGCTGTTGGTAACA+AGG | - | chr2.1:2101680-2101699 | None:intergenic | 45.0% |
| !! | TGGTTCGGTTTGGATTGGTT+CGG | - | chr2.1:2100159-2100178 | None:intergenic | 45.0% |
| !! | TGTAACGGTTCGGTTTGGAT+TGG | - | chr2.1:2100285-2100304 | None:intergenic | 45.0% |
| !! | TTCATCGGTTCGGTTTGGTT+CGG | - | chr2.1:2100227-2100246 | None:intergenic | 45.0% |
| !! | TTGTTTTTCTCCAGTGTCGG+AGG | + | chr2.1:2102442-2102461 | MS.gene61543:intron | 45.0% |
| !!! | GTGGATGGACGCTAGTTTTA+TGG | - | chr2.1:2101938-2101957 | None:intergenic | 45.0% |
| AGTGTACTCACCGTTCGATG+AGG | - | chr2.1:2098265-2098284 | None:intergenic | 50.0% | |
| ATGAGGAGAAGCAAAGCCAC+AGG | - | chr2.1:2101862-2101881 | None:intergenic | 50.0% | |
| ATTGTTGTGCCTAGCACCTG+TGG | + | chr2.1:2101843-2101862 | MS.gene61543:intron | 50.0% | |
| CAGAGCAACAGTGTTGTGGA+TGG | - | chr2.1:2101953-2101972 | None:intergenic | 50.0% | |
| CCAAGAAAGAACGCCAGTGT+AGG | - | chr2.1:2100515-2100534 | None:intergenic | 50.0% | |
| CCTACACTGGCGTTCTTTCT+TGG | + | chr2.1:2100512-2100531 | MS.gene61543:CDS | 50.0% | |
| CTGCAAGCTTAGGCTTTCTC+CGG | + | chr2.1:2098898-2098917 | MS.gene61543:intron | 50.0% | |
| GAACCAAACCGAACCGATGA+AGG | + | chr2.1:2100226-2100245 | MS.gene61543:intron | 50.0% | |
| GCCCCTATCAGATAAAGCCT+AGG | + | chr2.1:2098778-2098797 | MS.gene61543:intron | 50.0% | |
| GGAACCCAATTGACAGCATG+AGG | - | chr2.1:2101879-2101898 | None:intergenic | 50.0% | |
| GGGAGTCTATATCAGCTGAC+CGG | - | chr2.1:2098920-2098939 | None:intergenic | 50.0% | |
| TCTGATAGGGGCTACCATTG+CGG | - | chr2.1:2098770-2098789 | None:intergenic | 50.0% | |
| TGCTTGAGTCACTCGGCAAT+TGG | - | chr2.1:2102312-2102331 | None:intergenic | 50.0% | |
| TGGAAGGTGAGAAGACATGC+CGG | + | chr2.1:2102575-2102594 | MS.gene61543:intron | 50.0% | |
| TGGAGATTCGTGCATCCTCT+CGG | + | chr2.1:2098817-2098836 | MS.gene61543:intron | 50.0% | |
| ! | ATGTAGGGGTGTAAGCGGTT+CGG | + | chr2.1:2099453-2099472 | MS.gene61543:intron | 50.0% |
| !! | CGGTTTGGTTCGGTTTGGAT+TGG | - | chr2.1:2100164-2100183 | None:intergenic | 50.0% |
| !! | GGGCTGTTGGTAACAAGGTT+AGG | - | chr2.1:2101675-2101694 | None:intergenic | 50.0% |
| AAGGAAACGGCGCTCAGTTG+GGG | - | chr2.1:2102513-2102532 | None:intergenic | 55.0% | |
| AGAGTTTGTCCCTCTCCGAG+AGG | - | chr2.1:2098835-2098854 | None:intergenic | 55.0% | |
| ATCTCACTCTCGACCCGCAA+TGG | + | chr2.1:2098753-2098772 | MS.gene61543:intron | 55.0% | |
| ATTCGTGCATCCTCTCGGAG+AGG | + | chr2.1:2098822-2098841 | MS.gene61543:intron | 55.0% | |
| CAAGGAAACGGCGCTCAGTT+GGG | - | chr2.1:2102514-2102533 | None:intergenic | 55.0% | |
| CTGATAGGGGCTACCATTGC+GGG | - | chr2.1:2098769-2098788 | None:intergenic | 55.0% | |
| GAAGCAAAGCCACAGGTGCT+AGG | - | chr2.1:2101855-2101874 | None:intergenic | 55.0% | |
| GCTTGCAGCTTACATTGCCG+CGG | - | chr2.1:2098886-2098905 | None:intergenic | 55.0% | |
| TCAAGGAAACGGCGCTCAGT+TGG | - | chr2.1:2102515-2102534 | None:intergenic | 55.0% | |
| TTCGTGCATCCTCTCGGAGA+GGG | + | chr2.1:2098823-2098842 | MS.gene61543:intron | 55.0% | |
| !! | AGGGGTGTAACGGTTCGGTT+TGG | - | chr2.1:2100290-2100309 | None:intergenic | 55.0% |
| !! | CGTTGGCAAAAAGCACCGCA+AGG | - | chr2.1:2098229-2098248 | None:intergenic | 55.0% |
| !! | GTCAAGCTTTGAAGGTGCCG+CGG | + | chr2.1:2098866-2098885 | MS.gene61543:intron | 55.0% |
| !! | GTGCTTTTTGCCAACGCCGA+GGG | + | chr2.1:2098233-2098252 | MS.gene61543:CDS | 55.0% |
| AGGAAACGGCGCTCAGTTGG+GGG | - | chr2.1:2102512-2102531 | None:intergenic | 60.0% | |
| GAGGATATTGCCCTCGGCGT+TGG | - | chr2.1:2098246-2098265 | None:intergenic | 60.0% | |
| !! | GGTGCTTTTTGCCAACGCCG+AGG | + | chr2.1:2098232-2098251 | MS.gene61543:CDS | 60.0% |
| CAGTGTAGGCGCTCCTCTGC+AGG | - | chr2.1:2100501-2100520 | None:intergenic | 65.0% | |
| !! | CTGCAGAGGAGCGCCTACAC+TGG | + | chr2.1:2100499-2100518 | MS.gene61543:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 2098221 | 2103130 | 2098221 | ID=MS.gene61543 |
| chr2.1 | mRNA | 2098221 | 2103130 | 2098221 | ID=MS.gene61543.t1;Parent=MS.gene61543 |
| chr2.1 | exon | 2098221 | 2098273 | 2098221 | ID=MS.gene61543.t1.exon1;Parent=MS.gene61543.t1 |
| chr2.1 | CDS | 2098221 | 2098273 | 2098221 | ID=cds.MS.gene61543.t1;Parent=MS.gene61543.t1 |
| chr2.1 | exon | 2100485 | 2100598 | 2100485 | ID=MS.gene61543.t1.exon2;Parent=MS.gene61543.t1 |
| chr2.1 | CDS | 2100485 | 2100598 | 2100485 | ID=cds.MS.gene61543.t1;Parent=MS.gene61543.t1 |
| chr2.1 | exon | 2101180 | 2101259 | 2101180 | ID=MS.gene61543.t1.exon3;Parent=MS.gene61543.t1 |
| chr2.1 | CDS | 2101180 | 2101259 | 2101180 | ID=cds.MS.gene61543.t1;Parent=MS.gene61543.t1 |
| chr2.1 | exon | 2102456 | 2102580 | 2102456 | ID=MS.gene61543.t1.exon4;Parent=MS.gene61543.t1 |
| chr2.1 | CDS | 2102456 | 2102580 | 2102456 | ID=cds.MS.gene61543.t1;Parent=MS.gene61543.t1 |
| chr2.1 | exon | 2103059 | 2103130 | 2103059 | ID=MS.gene61543.t1.exon5;Parent=MS.gene61543.t1 |
| chr2.1 | CDS | 2103059 | 2103130 | 2103059 | ID=cds.MS.gene61543.t1;Parent=MS.gene61543.t1 |
| Gene Sequence |
| Protein sequence |
