Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63726.t1 | XP_003596326.1 | 98.6 | 145 | 2 | 0 | 4 | 148 | 73 | 217 | 4.80E-72 | 280.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63726.t1 | Q39222 | 84.8 | 145 | 21 | 1 | 4 | 148 | 73 | 216 | 5.9e-63 | 241.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63726.t1 | G7ITF9 | 98.6 | 145 | 2 | 0 | 4 | 148 | 73 | 217 | 3.5e-72 | 280.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene63726 | -0.832325 | 1.01E-55 | -1.69E-46 |
| MS.gene049341 | MS.gene63726 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene63726 | 0.82101 | 5.07E-53 | -1.69E-46 |
| MS.gene049411 | MS.gene63726 | 0.849162 | 3.86E-60 | -1.69E-46 |
| MS.gene049580 | MS.gene63726 | 0.803842 | 2.87E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene63726 | 0.836036 | 1.18E-56 | -1.69E-46 |
| MS.gene049887 | MS.gene63726 | 0.876956 | 9.24E-69 | -1.69E-46 |
| MS.gene050277 | MS.gene63726 | 0.813771 | 2.16E-51 | -1.69E-46 |
| MS.gene050320 | MS.gene63726 | 0.805876 | 1.08E-49 | -1.69E-46 |
| MS.gene050437 | MS.gene63726 | 0.815875 | 7.39E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene63726 | 0.832787 | 7.74E-56 | -1.69E-46 |
| MS.gene050752 | MS.gene63726 | 0.854064 | 1.58E-61 | -1.69E-46 |
| MS.gene050838 | MS.gene63726 | 0.900473 | 7.08E-78 | -1.69E-46 |
| MS.gene050955 | MS.gene63726 | 0.82066 | 6.10E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene63726 | 0.833967 | 3.93E-56 | -1.69E-46 |
| MS.gene051063 | MS.gene63726 | 0.82728 | 1.71E-54 | -1.69E-46 |
| MS.gene051233 | MS.gene63726 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene63726 | 0.879339 | 1.35E-69 | -1.69E-46 |
| MS.gene051343 | MS.gene63726 | 0.833381 | 5.51E-56 | -1.69E-46 |
| MS.gene051642 | MS.gene63726 | 0.844167 | 8.94E-59 | -1.69E-46 |
| MS.gene051687 | MS.gene63726 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene051700 | MS.gene63726 | 0.820551 | 6.46E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene63726 | 0.85461 | 1.10E-61 | -1.69E-46 |
| MS.gene051748 | MS.gene63726 | 0.858753 | 6.63E-63 | -1.69E-46 |
| MS.gene051756 | MS.gene63726 | 0.805049 | 1.61E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene63726 | 0.844859 | 5.82E-59 | -1.69E-46 |
| MS.gene051885 | MS.gene63726 | 0.877476 | 6.09E-69 | -1.69E-46 |
| MS.gene051902 | MS.gene63726 | 0.807797 | 4.24E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene63726 | 0.855963 | 4.43E-62 | -1.69E-46 |
| MS.gene052072 | MS.gene63726 | 0.841237 | 5.37E-58 | -1.69E-46 |
| MS.gene052133 | MS.gene63726 | 0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene63726 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene63726 | 0.85133 | 9.52E-61 | -1.69E-46 |
| MS.gene052397 | MS.gene63726 | 0.807376 | 5.21E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene63726 | 0.80018 | 1.63E-48 | -1.69E-46 |
| MS.gene052947 | MS.gene63726 | 0.852508 | 4.41E-61 | -1.69E-46 |
| MS.gene053109 | MS.gene63726 | 0.831486 | 1.62E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene63726 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene63726 | 0.802034 | 6.80E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene63726 | 0.843521 | 1.33E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene63726 | 0.851655 | 7.70E-61 | -1.69E-46 |
| MS.gene054250 | MS.gene63726 | 0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene63726 | 0.852184 | 5.45E-61 | -1.69E-46 |
| MS.gene055162 | MS.gene63726 | 0.812877 | 3.40E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene63726 | 0.809165 | 2.17E-50 | -1.69E-46 |
| MS.gene055314 | MS.gene63726 | 0.805502 | 1.29E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene63726 | 0.828185 | 1.03E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene63726 | 0.812415 | 4.29E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene63726 | 0.801614 | 8.28E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene63726 | 0.814024 | 1.90E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene63726 | -0.814659 | 1.38E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene63726 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene63726 | -0.836846 | 7.36E-57 | -1.69E-46 |
| MS.gene056075 | MS.gene63726 | 0.895935 | 5.97E-76 | -1.69E-46 |
| MS.gene056432 | MS.gene63726 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene63726 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene63726 | 0.827482 | 1.53E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene63726 | 0.873823 | 1.09E-67 | -1.69E-46 |
| MS.gene057102 | MS.gene63726 | 0.828328 | 9.55E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene63726 | 0.833999 | 3.86E-56 | -1.69E-46 |
| MS.gene057705 | MS.gene63726 | 0.849996 | 2.26E-60 | -1.69E-46 |
| MS.gene05781 | MS.gene63726 | 0.809464 | 1.87E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene63726 | 0.806547 | 7.80E-50 | -1.69E-46 |
| MS.gene058074 | MS.gene63726 | 0.81993 | 8.96E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene63726 | 0.819414 | 1.18E-52 | -1.69E-46 |
| MS.gene058261 | MS.gene63726 | 0.808755 | 2.65E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene63726 | 0.859104 | 5.21E-63 | -1.69E-46 |
| MS.gene058906 | MS.gene63726 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene63726 | 0.805949 | 1.04E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene63726 | 0.881789 | 1.79E-70 | -1.69E-46 |
| MS.gene059227 | MS.gene63726 | 0.871115 | 8.74E-67 | -1.69E-46 |
| MS.gene059726 | MS.gene63726 | 0.84122 | 5.42E-58 | -1.69E-46 |
| MS.gene05978 | MS.gene63726 | 0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene06001 | MS.gene63726 | 0.867645 | 1.17E-65 | -1.69E-46 |
| MS.gene06011 | MS.gene63726 | 0.818151 | 2.28E-52 | -1.69E-46 |
| MS.gene060465 | MS.gene63726 | 0.801898 | 7.25E-49 | -1.69E-46 |
| MS.gene060574 | MS.gene63726 | 0.891704 | 3.11E-74 | -1.69E-46 |
| MS.gene060763 | MS.gene63726 | 0.840888 | 6.63E-58 | -1.69E-46 |
| MS.gene061006 | MS.gene63726 | 0.806841 | 6.76E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene63726 | 0.816616 | 5.05E-52 | -1.69E-46 |
| MS.gene061145 | MS.gene63726 | 0.826116 | 3.24E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63726.t1 | MTR_2g075950 | 98.621 | 145 | 2 | 0 | 4 | 148 | 73 | 217 | 1.08e-102 | 293 |
| MS.gene63726.t1 | MTR_2g083860 | 77.397 | 146 | 32 | 1 | 4 | 148 | 73 | 218 | 3.67e-74 | 221 |
| MS.gene63726.t1 | MTR_2g014990 | 72.789 | 147 | 36 | 3 | 4 | 148 | 73 | 217 | 3.24e-73 | 218 |
| MS.gene63726.t1 | MTR_4g079350 | 70.748 | 147 | 39 | 3 | 4 | 148 | 73 | 217 | 1.93e-72 | 216 |
| MS.gene63726.t1 | MTR_4g088090 | 72.109 | 147 | 37 | 3 | 4 | 148 | 73 | 217 | 2.86e-72 | 216 |
| MS.gene63726.t1 | MTR_2g090865 | 71.918 | 146 | 38 | 3 | 4 | 148 | 71 | 214 | 7.17e-72 | 215 |
| MS.gene63726.t1 | MTR_4g064897 | 62.069 | 145 | 54 | 1 | 4 | 148 | 72 | 215 | 2.18e-62 | 191 |
| MS.gene63726.t1 | MTR_3g069510 | 57.931 | 145 | 61 | 0 | 4 | 148 | 72 | 216 | 6.48e-58 | 179 |
| MS.gene63726.t1 | MTR_2g005510 | 60.274 | 146 | 57 | 1 | 4 | 148 | 75 | 220 | 3.52e-57 | 177 |
| MS.gene63726.t1 | MTR_1g052475 | 55.705 | 149 | 61 | 3 | 4 | 147 | 75 | 223 | 3.91e-54 | 170 |
| MS.gene63726.t1 | MTR_0262s0050 | 53.793 | 145 | 65 | 1 | 4 | 146 | 75 | 219 | 1.40e-53 | 169 |
| MS.gene63726.t1 | MTR_8g089985 | 53.846 | 156 | 54 | 3 | 4 | 148 | 77 | 225 | 5.48e-53 | 167 |
| MS.gene63726.t1 | MTR_3g086980 | 55.102 | 147 | 63 | 3 | 4 | 147 | 76 | 222 | 1.81e-52 | 166 |
| MS.gene63726.t1 | MTR_6g079550 | 50.000 | 144 | 72 | 0 | 4 | 147 | 72 | 215 | 3.41e-47 | 152 |
| MS.gene63726.t1 | MTR_8g027220 | 49.664 | 149 | 67 | 3 | 4 | 147 | 86 | 231 | 2.43e-44 | 145 |
| MS.gene63726.t1 | MTR_1g078200 | 46.667 | 150 | 74 | 2 | 4 | 147 | 74 | 223 | 1.66e-42 | 140 |
| MS.gene63726.t1 | MTR_7g405790 | 57.658 | 111 | 47 | 0 | 4 | 114 | 75 | 185 | 2.56e-42 | 140 |
| MS.gene63726.t1 | MTR_7g051940 | 54.955 | 111 | 50 | 0 | 4 | 114 | 73 | 183 | 2.82e-40 | 134 |
| MS.gene63726.t1 | MTR_8g036220 | 45.395 | 152 | 75 | 3 | 4 | 147 | 76 | 227 | 6.62e-40 | 134 |
| MS.gene63726.t1 | MTR_2g027660 | 40.667 | 150 | 79 | 2 | 4 | 147 | 66 | 211 | 2.10e-35 | 122 |
| MS.gene63726.t1 | MTR_8g107070 | 45.000 | 140 | 76 | 1 | 4 | 142 | 74 | 213 | 1.19e-33 | 119 |
| MS.gene63726.t1 | MTR_6g021790 | 48.077 | 104 | 54 | 0 | 4 | 107 | 66 | 169 | 3.98e-31 | 111 |
| MS.gene63726.t1 | MTR_8g031660 | 41.667 | 144 | 81 | 3 | 4 | 147 | 66 | 206 | 1.55e-30 | 109 |
| MS.gene63726.t1 | MTR_4g099470 | 38.621 | 145 | 79 | 2 | 4 | 148 | 44 | 178 | 3.06e-30 | 108 |
| MS.gene63726.t1 | MTR_7g117910 | 38.514 | 148 | 71 | 2 | 4 | 147 | 80 | 211 | 1.15e-29 | 107 |
| MS.gene63726.t1 | MTR_2g078000 | 97.917 | 48 | 1 | 0 | 6 | 53 | 47 | 94 | 1.01e-28 | 102 |
| MS.gene63726.t1 | MTR_8g006970 | 40.411 | 146 | 76 | 3 | 4 | 148 | 82 | 217 | 1.09e-28 | 105 |
| MS.gene63726.t1 | MTR_7g081700 | 38.621 | 145 | 79 | 2 | 4 | 148 | 68 | 202 | 1.91e-28 | 103 |
| MS.gene63726.t1 | MTR_8g031870 | 48.454 | 97 | 50 | 0 | 4 | 100 | 66 | 162 | 3.74e-28 | 102 |
| MS.gene63726.t1 | MTR_8g031680 | 43.269 | 104 | 59 | 0 | 4 | 107 | 66 | 169 | 1.06e-26 | 99.8 |
| MS.gene63726.t1 | MTR_1g094220 | 44.231 | 104 | 58 | 0 | 4 | 107 | 92 | 195 | 2.53e-26 | 98.6 |
| MS.gene63726.t1 | MTR_8g006970 | 49.474 | 95 | 48 | 0 | 4 | 98 | 68 | 162 | 1.32e-25 | 96.3 |
| MS.gene63726.t1 | MTR_2g102060 | 33.562 | 146 | 81 | 2 | 4 | 148 | 70 | 200 | 2.37e-25 | 95.9 |
| MS.gene63726.t1 | MTR_1g094220 | 44.444 | 99 | 55 | 0 | 4 | 102 | 92 | 190 | 4.03e-25 | 95.5 |
| MS.gene63726.t1 | MTR_3g064390 | 34.459 | 148 | 76 | 3 | 4 | 147 | 70 | 200 | 5.34e-25 | 95.1 |
| MS.gene63726.t1 | MTR_1g094220 | 46.316 | 95 | 51 | 0 | 4 | 98 | 92 | 186 | 1.54e-24 | 94.4 |
| MS.gene63726.t1 | MTR_1g094220 | 44.762 | 105 | 57 | 1 | 4 | 108 | 92 | 195 | 1.55e-24 | 94.7 |
| MS.gene63726.t1 | MTR_2g005500 | 35.664 | 143 | 83 | 2 | 4 | 146 | 69 | 202 | 1.62e-24 | 94.0 |
| MS.gene63726.t1 | MTR_8g031830 | 37.241 | 145 | 78 | 4 | 4 | 147 | 66 | 198 | 3.06e-24 | 93.2 |
| MS.gene63726.t1 | MTR_5g076590 | 34.459 | 148 | 76 | 3 | 4 | 147 | 70 | 200 | 3.64e-24 | 92.8 |
| MS.gene63726.t1 | MTR_2g078560 | 84.314 | 51 | 8 | 0 | 1 | 51 | 49 | 99 | 3.74e-24 | 95.5 |
| MS.gene63726.t1 | MTR_1g115325 | 36.111 | 144 | 87 | 2 | 4 | 146 | 75 | 214 | 3.96e-24 | 93.2 |
| MS.gene63726.t1 | MTR_1g068740 | 42.478 | 113 | 60 | 2 | 4 | 115 | 75 | 183 | 2.09e-23 | 91.3 |
| MS.gene63726.t1 | MTR_1g068730 | 41.593 | 113 | 61 | 2 | 4 | 115 | 75 | 183 | 5.57e-23 | 90.5 |
| MS.gene63726.t1 | MTR_7g100020 | 43.689 | 103 | 57 | 1 | 4 | 105 | 75 | 177 | 9.49e-23 | 89.7 |
| MS.gene63726.t1 | MTR_7g103070 | 40.411 | 146 | 78 | 4 | 4 | 147 | 20 | 158 | 1.94e-22 | 87.4 |
| MS.gene63726.t1 | MTR_7g103070 | 40.411 | 146 | 78 | 4 | 4 | 147 | 76 | 214 | 8.68e-22 | 87.0 |
| MS.gene63726.t1 | MTR_1g062760 | 39.310 | 145 | 79 | 4 | 4 | 146 | 73 | 210 | 9.38e-22 | 87.0 |
| MS.gene63726.t1 | MTR_2g096550 | 43.269 | 104 | 57 | 2 | 4 | 105 | 75 | 178 | 2.49e-21 | 85.9 |
| MS.gene63726.t1 | MTR_8g103550 | 36.275 | 102 | 65 | 0 | 4 | 105 | 69 | 170 | 1.08e-20 | 84.0 |
| MS.gene63726.t1 | MTR_8g093740 | 35.862 | 145 | 83 | 4 | 4 | 146 | 39 | 175 | 3.20e-19 | 79.7 |
| MS.gene63726.t1 | MTR_4g063160 | 36.429 | 140 | 73 | 5 | 13 | 146 | 86 | 215 | 3.71e-19 | 80.5 |
| MS.gene63726.t1 | MTR_8g093740 | 35.862 | 145 | 83 | 4 | 4 | 146 | 72 | 208 | 4.67e-19 | 79.7 |
| MS.gene63726.t1 | MTR_1g090717 | 35.616 | 146 | 83 | 4 | 4 | 147 | 76 | 212 | 8.01e-19 | 79.3 |
| MS.gene63726.t1 | MTR_1g029450 | 40.385 | 104 | 60 | 2 | 4 | 105 | 76 | 179 | 1.51e-18 | 78.6 |
| MS.gene63726.t1 | MTR_3g096350 | 36.054 | 147 | 80 | 5 | 4 | 146 | 71 | 207 | 1.77e-18 | 78.2 |
| MS.gene63726.t1 | MTR_1g069245 | 75.000 | 48 | 12 | 0 | 4 | 51 | 152 | 199 | 3.38e-18 | 77.8 |
| MS.gene63726.t1 | MTR_5g013900 | 36.735 | 98 | 62 | 0 | 4 | 101 | 69 | 166 | 4.78e-18 | 77.4 |
| MS.gene63726.t1 | MTR_4g098950 | 35.714 | 98 | 63 | 0 | 4 | 101 | 69 | 166 | 4.12e-17 | 74.7 |
| MS.gene63726.t1 | MTR_1g068740 | 36.364 | 99 | 54 | 2 | 4 | 102 | 75 | 164 | 5.00e-17 | 74.3 |
| MS.gene63726.t1 | MTR_8g090215 | 33.673 | 98 | 65 | 0 | 4 | 101 | 69 | 166 | 9.41e-17 | 73.9 |
| MS.gene63726.t1 | MTR_1g068730 | 51.724 | 58 | 28 | 0 | 4 | 61 | 75 | 132 | 1.01e-16 | 72.8 |
| MS.gene63726.t1 | MTR_3g087160 | 33.673 | 98 | 65 | 0 | 4 | 101 | 69 | 166 | 1.12e-16 | 73.6 |
| MS.gene63726.t1 | MTR_3g064390 | 38.806 | 67 | 41 | 0 | 4 | 70 | 70 | 136 | 1.32e-12 | 62.0 |
| MS.gene63726.t1 | MTR_3g096350 | 40.476 | 84 | 48 | 2 | 4 | 85 | 71 | 154 | 3.23e-12 | 60.8 |
| MS.gene63726.t1 | MTR_3g096350 | 49.153 | 59 | 28 | 2 | 4 | 60 | 71 | 129 | 6.10e-12 | 60.1 |
| MS.gene63726.t1 | MTR_4g069850 | 29.530 | 149 | 86 | 7 | 4 | 145 | 68 | 204 | 1.53e-11 | 60.1 |
| MS.gene63726.t1 | MTR_4g012940 | 28.859 | 149 | 88 | 5 | 4 | 145 | 68 | 205 | 3.60e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63726.t1 | AT1G16920 | 84.828 | 145 | 21 | 1 | 4 | 148 | 73 | 216 | 4.20e-87 | 253 |
| MS.gene63726.t1 | AT5G45750 | 80.690 | 145 | 27 | 1 | 4 | 148 | 73 | 216 | 4.56e-82 | 241 |
| MS.gene63726.t1 | AT4G18800 | 77.931 | 145 | 29 | 2 | 4 | 148 | 73 | 214 | 8.35e-80 | 235 |
| MS.gene63726.t1 | AT1G06400 | 73.103 | 145 | 38 | 1 | 4 | 148 | 73 | 216 | 5.12e-76 | 225 |
| MS.gene63726.t1 | AT1G28550 | 69.388 | 147 | 42 | 2 | 4 | 148 | 73 | 218 | 1.28e-73 | 219 |
| MS.gene63726.t1 | AT5G60860 | 70.748 | 147 | 39 | 3 | 4 | 148 | 73 | 217 | 2.18e-72 | 216 |
| MS.gene63726.t1 | AT3G15060 | 70.748 | 147 | 39 | 3 | 4 | 148 | 73 | 217 | 1.08e-71 | 214 |
| MS.gene63726.t1 | AT2G33870 | 68.027 | 147 | 44 | 2 | 4 | 148 | 73 | 218 | 6.97e-71 | 213 |
| MS.gene63726.t1 | AT4G18430 | 67.123 | 146 | 44 | 2 | 4 | 147 | 73 | 216 | 2.20e-70 | 211 |
| MS.gene63726.t1 | AT1G07410 | 61.379 | 145 | 54 | 2 | 4 | 148 | 72 | 214 | 4.31e-61 | 187 |
| MS.gene63726.t1 | AT1G09630 | 60.959 | 146 | 55 | 2 | 4 | 148 | 72 | 216 | 5.51e-60 | 185 |
| MS.gene63726.t1 | AT5G59150 | 60.544 | 147 | 55 | 2 | 4 | 148 | 21 | 166 | 7.15e-57 | 175 |
| MS.gene63726.t1 | AT5G59150 | 60.544 | 147 | 55 | 2 | 4 | 148 | 72 | 217 | 5.38e-56 | 174 |
| MS.gene63726.t1 | AT3G46830 | 59.864 | 147 | 56 | 2 | 4 | 148 | 72 | 217 | 1.75e-55 | 173 |
| MS.gene63726.t1 | AT3G46830 | 59.864 | 147 | 56 | 2 | 4 | 148 | 72 | 217 | 1.75e-55 | 173 |
| MS.gene63726.t1 | AT3G12160 | 55.479 | 146 | 61 | 2 | 4 | 146 | 75 | 219 | 4.40e-55 | 172 |
| MS.gene63726.t1 | AT5G47960 | 57.432 | 148 | 60 | 1 | 4 | 148 | 75 | 222 | 9.51e-55 | 172 |
| MS.gene63726.t1 | AT4G39990 | 54.545 | 154 | 54 | 3 | 4 | 148 | 77 | 223 | 7.81e-53 | 167 |
| MS.gene63726.t1 | AT5G65270 | 56.291 | 151 | 59 | 3 | 4 | 148 | 77 | 226 | 1.35e-52 | 166 |
| MS.gene63726.t1 | AT5G47520 | 51.007 | 149 | 68 | 3 | 4 | 148 | 74 | 221 | 4.60e-47 | 152 |
| MS.gene63726.t1 | AT2G43130 | 51.007 | 149 | 61 | 3 | 4 | 147 | 72 | 213 | 2.92e-44 | 145 |
| MS.gene63726.t1 | AT2G31680 | 49.032 | 155 | 61 | 3 | 4 | 148 | 72 | 218 | 5.18e-43 | 142 |
| MS.gene63726.t1 | AT1G05810 | 50.980 | 153 | 60 | 4 | 4 | 148 | 72 | 217 | 1.15e-42 | 140 |
| MS.gene63726.t1 | AT1G05810 | 50.980 | 153 | 60 | 4 | 4 | 148 | 118 | 263 | 3.84e-42 | 140 |
| MS.gene63726.t1 | AT3G07410 | 59.633 | 109 | 44 | 0 | 4 | 112 | 72 | 180 | 7.39e-42 | 139 |
| MS.gene63726.t1 | AT1G18200 | 43.871 | 155 | 75 | 2 | 4 | 146 | 73 | 227 | 2.05e-39 | 133 |
| MS.gene63726.t1 | AT1G73640 | 45.283 | 159 | 71 | 3 | 4 | 146 | 73 | 231 | 5.89e-39 | 132 |
| MS.gene63726.t1 | AT1G01200 | 46.358 | 151 | 72 | 4 | 4 | 147 | 88 | 236 | 3.41e-38 | 130 |
| MS.gene63726.t1 | AT5G46025 | 56.757 | 111 | 47 | 1 | 1 | 110 | 1 | 111 | 4.30e-38 | 125 |
| MS.gene63726.t1 | AT4G17170 | 40.667 | 150 | 79 | 2 | 4 | 147 | 66 | 211 | 2.09e-35 | 122 |
| MS.gene63726.t1 | AT4G17160 | 42.759 | 145 | 77 | 2 | 4 | 147 | 66 | 205 | 1.32e-34 | 120 |
| MS.gene63726.t1 | AT4G35860 | 49.038 | 104 | 53 | 0 | 4 | 107 | 20 | 123 | 8.14e-33 | 114 |
| MS.gene63726.t1 | AT4G35860 | 49.038 | 104 | 53 | 0 | 4 | 107 | 66 | 169 | 5.09e-32 | 113 |
| MS.gene63726.t1 | AT1G02130 | 40.411 | 146 | 76 | 3 | 4 | 148 | 68 | 203 | 3.06e-29 | 106 |
| MS.gene63726.t1 | AT5G45130 | 41.270 | 126 | 68 | 1 | 4 | 129 | 70 | 189 | 1.54e-28 | 104 |
| MS.gene63726.t1 | AT5G45130 | 41.600 | 125 | 67 | 1 | 4 | 128 | 78 | 196 | 2.42e-28 | 103 |
| MS.gene63726.t1 | AT5G47200 | 38.621 | 145 | 79 | 2 | 4 | 148 | 68 | 202 | 2.83e-28 | 103 |
| MS.gene63726.t1 | AT4G17530 | 37.931 | 145 | 80 | 2 | 4 | 148 | 68 | 202 | 4.40e-28 | 103 |
| MS.gene63726.t1 | AT3G11730 | 35.664 | 143 | 85 | 1 | 4 | 146 | 68 | 203 | 7.19e-28 | 102 |
| MS.gene63726.t1 | AT4G19640 | 42.857 | 105 | 60 | 0 | 4 | 108 | 70 | 174 | 8.62e-28 | 102 |
| MS.gene63726.t1 | AT3G54840 | 45.192 | 104 | 57 | 0 | 4 | 107 | 60 | 163 | 4.09e-26 | 97.1 |
| MS.gene63726.t1 | AT3G54840 | 45.192 | 104 | 57 | 0 | 4 | 107 | 94 | 197 | 5.97e-26 | 97.8 |
| MS.gene63726.t1 | AT5G03520 | 37.931 | 145 | 84 | 2 | 4 | 147 | 65 | 204 | 6.84e-26 | 97.8 |
| MS.gene63726.t1 | AT5G03520 | 37.931 | 145 | 84 | 2 | 4 | 147 | 75 | 214 | 9.34e-26 | 97.4 |
| MS.gene63726.t1 | AT3G54840 | 47.368 | 95 | 50 | 0 | 4 | 98 | 94 | 188 | 2.00e-24 | 93.6 |
| MS.gene63726.t1 | AT3G09900 | 34.483 | 145 | 91 | 2 | 4 | 147 | 75 | 216 | 2.36e-23 | 91.3 |
| MS.gene63726.t1 | AT5G03530 | 40.411 | 146 | 78 | 4 | 4 | 147 | 72 | 210 | 1.18e-22 | 89.4 |
| MS.gene63726.t1 | AT5G03530 | 40.411 | 146 | 78 | 4 | 4 | 147 | 72 | 210 | 1.18e-22 | 89.4 |
| MS.gene63726.t1 | AT4G08190 | 63.636 | 66 | 21 | 1 | 33 | 98 | 65 | 127 | 1.51e-22 | 87.0 |
| MS.gene63726.t1 | AT3G46060 | 44.444 | 99 | 54 | 1 | 4 | 101 | 75 | 173 | 1.77e-22 | 89.0 |
| MS.gene63726.t1 | AT3G46060 | 44.444 | 99 | 54 | 1 | 4 | 101 | 75 | 173 | 1.77e-22 | 89.0 |
| MS.gene63726.t1 | AT3G46060 | 44.444 | 99 | 54 | 1 | 4 | 101 | 75 | 173 | 1.77e-22 | 89.0 |
| MS.gene63726.t1 | AT1G43890 | 40.769 | 130 | 70 | 4 | 4 | 127 | 72 | 200 | 1.97e-22 | 89.0 |
| MS.gene63726.t1 | AT1G43890 | 40.769 | 130 | 70 | 4 | 4 | 127 | 72 | 200 | 1.97e-22 | 89.0 |
| MS.gene63726.t1 | AT1G43890 | 40.769 | 130 | 70 | 4 | 4 | 127 | 72 | 200 | 1.97e-22 | 89.0 |
| MS.gene63726.t1 | AT5G59840 | 42.718 | 103 | 58 | 1 | 4 | 105 | 75 | 177 | 5.33e-22 | 87.8 |
| MS.gene63726.t1 | AT3G53610 | 41.748 | 103 | 59 | 1 | 4 | 105 | 75 | 177 | 3.49e-21 | 85.5 |
| MS.gene63726.t1 | AT3G53610 | 41.748 | 103 | 59 | 1 | 4 | 105 | 75 | 177 | 3.49e-21 | 85.5 |
| MS.gene63726.t1 | AT3G53610 | 41.748 | 103 | 59 | 1 | 4 | 105 | 75 | 177 | 3.49e-21 | 85.5 |
| MS.gene63726.t1 | AT3G09910 | 38.889 | 126 | 70 | 3 | 4 | 127 | 72 | 192 | 1.36e-18 | 78.6 |
| MS.gene63726.t1 | AT3G09910 | 38.889 | 126 | 70 | 3 | 4 | 127 | 72 | 192 | 1.36e-18 | 78.6 |
| MS.gene63726.t1 | AT3G09910 | 38.889 | 126 | 70 | 3 | 4 | 127 | 72 | 192 | 1.36e-18 | 78.6 |
| MS.gene63726.t1 | AT3G09910 | 38.211 | 123 | 69 | 3 | 4 | 119 | 72 | 194 | 1.21e-17 | 75.9 |
| MS.gene63726.t1 | AT3G09910 | 38.211 | 123 | 69 | 3 | 4 | 119 | 72 | 194 | 1.21e-17 | 75.9 |
| MS.gene63726.t1 | AT2G22290 | 34.694 | 98 | 64 | 0 | 4 | 101 | 69 | 166 | 1.44e-16 | 73.6 |
| MS.gene63726.t1 | AT5G10260 | 33.673 | 98 | 65 | 0 | 4 | 101 | 69 | 166 | 5.75e-16 | 71.6 |
| MS.gene63726.t1 | AT5G64990 | 34.694 | 98 | 64 | 0 | 4 | 101 | 67 | 164 | 7.35e-16 | 71.6 |
| MS.gene63726.t1 | AT5G64990 | 34.694 | 98 | 64 | 0 | 4 | 101 | 74 | 171 | 7.83e-16 | 71.6 |
| MS.gene63726.t1 | AT2G44610 | 34.694 | 98 | 64 | 0 | 4 | 101 | 69 | 166 | 1.22e-15 | 70.9 |
| MS.gene63726.t1 | AT4G39890 | 34.343 | 99 | 64 | 1 | 4 | 101 | 69 | 167 | 3.85e-15 | 69.7 |
| MS.gene63726.t1 | AT4G19640 | 41.096 | 73 | 43 | 0 | 4 | 76 | 70 | 142 | 5.79e-15 | 68.9 |
| MS.gene63726.t1 | AT4G19640 | 41.791 | 67 | 39 | 0 | 4 | 70 | 70 | 136 | 2.57e-14 | 66.2 |
| MS.gene63726.t1 | AT3G18820 | 31.008 | 129 | 74 | 4 | 4 | 125 | 68 | 188 | 1.40e-11 | 60.1 |
| MS.gene63726.t1 | AT5G39620 | 29.008 | 131 | 82 | 4 | 4 | 126 | 65 | 192 | 7.08e-11 | 58.2 |
| MS.gene63726.t1 | AT5G55080 | 35.052 | 97 | 56 | 3 | 4 | 98 | 73 | 164 | 8.59e-11 | 58.2 |
Find 27 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGAATCACTTTATTTCA+TGG | 0.263251 | 2.1:-23686327 | MS.gene63726:CDS |
| TATTGTTCAATTACTCTTCA+AGG | 0.383110 | 2.1:+23687128 | None:intergenic |
| GCTGTAGAGGGTGCTGAAAA+TGG | 0.383578 | 2.1:-23686221 | MS.gene63726:CDS |
| GAAATAAAGTGATTCTTTCT+CGG | 0.391175 | 2.1:+23686331 | None:intergenic |
| AACATTGTTGTGATGCTTGT+TGG | 0.427166 | 2.1:-23686413 | MS.gene63726:CDS |
| TTTCATGGAAACCTCAGCTC+TGG | 0.442500 | 2.1:-23686312 | MS.gene63726:CDS |
| CAGCTTTCTTGCTAACAATA+CGG | 0.494643 | 2.1:+23686240 | None:intergenic |
| CTTCCCATCTTCAGTTGATA+CGG | 0.496302 | 2.1:+23686361 | None:intergenic |
| GCTTACTATCGTGGGGCAGT+TGG | 0.519994 | 2.1:-23686524 | MS.gene63726:CDS |
| CTTCAGTTGATACGGCTACA+AGG | 0.532280 | 2.1:+23686369 | None:intergenic |
| GTTTCAGCTTTGAAGAGAGT+TGG | 0.538571 | 2.1:-23686149 | MS.gene63726:CDS |
| AACAAGCATCACAACAATGT+TGG | 0.538592 | 2.1:+23686415 | None:intergenic |
| AACGCGTCTGTGCCAGCCAA+AGG | 0.543390 | 2.1:-23686197 | MS.gene63726:CDS |
| ACGATAGTAAGCACTTGTAA+TGG | 0.555075 | 2.1:+23686535 | None:intergenic |
| GTAGCCGTATCAACTGAAGA+TGG | 0.561123 | 2.1:-23686365 | MS.gene63726:CDS |
| ATTACAAGTGCTTACTATCG+TGG | 0.574326 | 2.1:-23686533 | MS.gene63726:CDS |
| TTACAAGTGCTTACTATCGT+GGG | 0.574573 | 2.1:-23686532 | MS.gene63726:CDS |
| CATGGAAACCTCAGCTCTGG+AGG | 0.574684 | 2.1:-23686309 | MS.gene63726:CDS |
| TGTTAGCAAGAAAGCTGTAG+AGG | 0.588403 | 2.1:-23686234 | MS.gene63726:CDS |
| CGACGTTCTCAAATGTTGCA+TGG | 0.590652 | 2.1:+23686474 | None:intergenic |
| TAGCCGTATCAACTGAAGAT+GGG | 0.593299 | 2.1:-23686364 | MS.gene63726:CDS |
| GTTAGCAAGAAAGCTGTAGA+GGG | 0.598414 | 2.1:-23686233 | MS.gene63726:CDS |
| CATTTGAGAACGTCGACAGA+TGG | 0.604678 | 2.1:-23686466 | MS.gene63726:CDS |
| GTTAGTAGCCTCCAGAGCTG+AGG | 0.627901 | 2.1:+23686301 | None:intergenic |
| TTGATACGGCTACAAGGTGA+CGG | 0.654516 | 2.1:+23686375 | None:intergenic |
| TACAAGTGCTTACTATCGTG+GGG | 0.673719 | 2.1:-23686531 | MS.gene63726:CDS |
| CAACAATGTTGGAATCTGTG+TGG | 0.736098 | 2.1:+23686426 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAAACAATGTTACT+CGG | + | chr2.1:23686439-23686458 | None:intergenic | 15.0% |
| !! | AAATAAAAACAATGTTACTC+GGG | + | chr2.1:23686438-23686457 | None:intergenic | 20.0% |
| !! | ATTAAAAAACCAGAATTATG+GGG | - | chr2.1:23686215-23686234 | MS.gene63726:CDS | 20.0% |
| !! | GATTAAAAAACCAGAATTAT+GGG | - | chr2.1:23686214-23686233 | MS.gene63726:CDS | 20.0% |
| !! | TGATTAAAAAACCAGAATTA+TGG | - | chr2.1:23686213-23686232 | MS.gene63726:CDS | 20.0% |
| !! | TTATCAAACTTACAAATGAT+AGG | - | chr2.1:23686480-23686499 | MS.gene63726:CDS | 20.0% |
| !! | TTATCAGTAGTAAAAATCTA+AGG | - | chr2.1:23686269-23686288 | MS.gene63726:CDS | 20.0% |
| !! | TTGTTAGTATTAGAACTTTA+AGG | - | chr2.1:23686384-23686403 | MS.gene63726:CDS | 20.0% |
| !!! | AAAGTTCTAATACTAACAAT+TGG | + | chr2.1:23686383-23686402 | None:intergenic | 20.0% |
| !!! | AAGTTCTAATACTAACAATT+GGG | + | chr2.1:23686382-23686401 | None:intergenic | 20.0% |
| !!! | AGAGTTCTAATACTAATAAT+AGG | + | chr2.1:23686322-23686341 | None:intergenic | 20.0% |
| !!! | AGATTTTTACTACTGATAAT+TGG | + | chr2.1:23686268-23686287 | None:intergenic | 20.0% |
| !!! | AGTTCTAATACTAATAATAG+GGG | + | chr2.1:23686320-23686339 | None:intergenic | 20.0% |
| !!! | GAGTTCTAATACTAATAATA+GGG | + | chr2.1:23686321-23686340 | None:intergenic | 20.0% |
| !!! | GTAACATTGTTTTTATTTAG+CGG | - | chr2.1:23686440-23686459 | MS.gene63726:CDS | 20.0% |
| ! | AAACTTACAAATGATAGGTA+TGG | - | chr2.1:23686485-23686504 | MS.gene63726:CDS | 25.0% |
| ! | CTAAAGTCAGTTACAAAATT+TGG | + | chr2.1:23686661-23686680 | None:intergenic | 25.0% |
| ! | GAAATAAAGTGATTCTTTCT+CGG | + | chr2.1:23686938-23686957 | None:intergenic | 25.0% |
| ! | TATTGTTCAATTACTCTTCA+AGG | + | chr2.1:23686141-23686160 | None:intergenic | 25.0% |
| ! | TTACAAATCAATCGTAACAA+TGG | + | chr2.1:23686631-23686650 | None:intergenic | 25.0% |
| !! | AGTTCTAATACTAACAATTG+GGG | + | chr2.1:23686381-23686400 | None:intergenic | 25.0% |
| !! | GAAAGAATCACTTTATTTCA+TGG | - | chr2.1:23686939-23686958 | MS.gene63726:intron | 25.0% |
| !!! | TAACTTGTATTTTTGAGCAA+AGG | - | chr2.1:23686189-23686208 | MS.gene63726:CDS | 25.0% |
| ! | AAGATCTATTTTCTCTCCTT+TGG | + | chr2.1:23687088-23687107 | None:intergenic | 30.0% |
| AAAAAACCAGAATTATGGGG+TGG | - | chr2.1:23686218-23686237 | MS.gene63726:CDS | 35.0% | |
| AAAAACCAGAATTATGGGGT+GGG | - | chr2.1:23686219-23686238 | MS.gene63726:CDS | 35.0% | |
| AACAAGCATCACAACAATGT+TGG | + | chr2.1:23686854-23686873 | None:intergenic | 35.0% | |
| AACATTGTTGTGATGCTTGT+TGG | - | chr2.1:23686853-23686872 | MS.gene63726:intron | 35.0% | |
| AAGGCCTAAAGTACAATAAG+TGG | - | chr2.1:23686537-23686556 | MS.gene63726:CDS | 35.0% | |
| ACGATAGTAAGCACTTGTAA+TGG | + | chr2.1:23686734-23686753 | None:intergenic | 35.0% | |
| ACTTATTGTACTTTAGGCCT+TGG | + | chr2.1:23686538-23686557 | None:intergenic | 35.0% | |
| ATTACAAGTGCTTACTATCG+TGG | - | chr2.1:23686733-23686752 | MS.gene63726:intron | 35.0% | |
| CAGCTTTCTTGCTAACAATA+CGG | + | chr2.1:23687029-23687048 | None:intergenic | 35.0% | |
| GACACCACTTATTGTACTTT+AGG | + | chr2.1:23686544-23686563 | None:intergenic | 35.0% | |
| TTACAAGTGCTTACTATCGT+GGG | - | chr2.1:23686734-23686753 | MS.gene63726:intron | 35.0% | |
| CAACAATGTTGGAATCTGTG+TGG | + | chr2.1:23686843-23686862 | None:intergenic | 40.0% | |
| GTTAGCAAGAAAGCTGTAGA+GGG | - | chr2.1:23687033-23687052 | MS.gene63726:intron | 40.0% | |
| TACAAGTGCTTACTATCGTG+GGG | - | chr2.1:23686735-23686754 | MS.gene63726:intron | 40.0% | |
| TAGCCGTATCAACTGAAGAT+GGG | - | chr2.1:23686902-23686921 | MS.gene63726:intron | 40.0% | |
| TGTTAGCAAGAAAGCTGTAG+AGG | - | chr2.1:23687032-23687051 | MS.gene63726:intron | 40.0% | |
| ! | CTTCCCATCTTCAGTTGATA+CGG | + | chr2.1:23686908-23686927 | None:intergenic | 40.0% |
| ! | GATGCTGCATAGTTGCTTTA+TGG | - | chr2.1:23686604-23686623 | MS.gene63726:intron | 40.0% |
| ! | TCTATTTTCTCTCCTTTGGC+TGG | + | chr2.1:23687084-23687103 | None:intergenic | 40.0% |
| ! | TGATTCAAGTTCTGTAGCCA+AGG | - | chr2.1:23686518-23686537 | MS.gene63726:CDS | 40.0% |
| !! | GTTTCAGCTTTGAAGAGAGT+TGG | - | chr2.1:23687117-23687136 | MS.gene63726:intron | 40.0% |
| !! | TTCACACTGTTTCTATCTGC+AGG | - | chr2.1:23686701-23686720 | MS.gene63726:intron | 40.0% |
| AACAATTGGGGCACATCAAG+AGG | + | chr2.1:23686369-23686388 | None:intergenic | 45.0% | |
| ATGCAGCATCGTGTTCATTC+AGG | + | chr2.1:23686594-23686613 | None:intergenic | 45.0% | |
| CATTTGAGAACGTCGACAGA+TGG | - | chr2.1:23686800-23686819 | MS.gene63726:intron | 45.0% | |
| CGACGTTCTCAAATGTTGCA+TGG | + | chr2.1:23686795-23686814 | None:intergenic | 45.0% | |
| GTAGCCGTATCAACTGAAGA+TGG | - | chr2.1:23686901-23686920 | MS.gene63726:intron | 45.0% | |
| TTGATACGGCTACAAGGTGA+CGG | + | chr2.1:23686894-23686913 | None:intergenic | 45.0% | |
| TTTCATGGAAACCTCAGCTC+TGG | - | chr2.1:23686954-23686973 | MS.gene63726:intron | 45.0% | |
| ! | CTTCAGTTGATACGGCTACA+AGG | + | chr2.1:23686900-23686919 | None:intergenic | 45.0% |
| ! | TGGCACATCAGATTTTGCAC+AGG | + | chr2.1:23686248-23686267 | None:intergenic | 45.0% |
| CAGCATCGTGTTCATTCAGG+TGG | + | chr2.1:23686591-23686610 | None:intergenic | 50.0% | |
| GGTATCCCACCCCATAATTC+TGG | + | chr2.1:23686227-23686246 | None:intergenic | 50.0% | |
| !! | GCTGTAGAGGGTGCTGAAAA+TGG | - | chr2.1:23687045-23687064 | MS.gene63726:intron | 50.0% |
| GCTTACTATCGTGGGGCAGT+TGG | - | chr2.1:23686742-23686761 | MS.gene63726:intron | 55.0% | |
| GTTAGTAGCCTCCAGAGCTG+AGG | + | chr2.1:23686968-23686987 | None:intergenic | 55.0% | |
| ! | CATGGAAACCTCAGCTCTGG+AGG | - | chr2.1:23686957-23686976 | MS.gene63726:intron | 55.0% |
| AACGCGTCTGTGCCAGCCAA+AGG | - | chr2.1:23687069-23687088 | MS.gene63726:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 23686133 | 23687155 | 23686133 | ID=MS.gene63726 |
| chr2.1 | mRNA | 23686133 | 23687155 | 23686133 | ID=MS.gene63726.t1;Parent=MS.gene63726 |
| chr2.1 | exon | 23687142 | 23687155 | 23687142 | ID=MS.gene63726.t1.exon1;Parent=MS.gene63726.t1 |
| chr2.1 | CDS | 23687142 | 23687155 | 23687142 | ID=cds.MS.gene63726.t1;Parent=MS.gene63726.t1 |
| chr2.1 | exon | 23686133 | 23686565 | 23686133 | ID=MS.gene63726.t1.exon2;Parent=MS.gene63726.t1 |
| chr2.1 | CDS | 23686133 | 23686565 | 23686133 | ID=cds.MS.gene63726.t1;Parent=MS.gene63726.t1 |
| Gene Sequence |
| Protein sequence |
