Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83565.t1 | XP_003597961.1 | 100 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 1.40E-39 | 171.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83565.t1 | A4FUI2 | 72.8 | 81 | 22 | 0 | 5 | 85 | 9 | 89 | 4.8e-28 | 124.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83565.t1 | G7IMA2 | 100.0 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 1.0e-39 | 171.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051568 | MS.gene83565 | -0.803178 | 3.95E-49 | -1.69E-46 |
MS.gene055367 | MS.gene83565 | -0.817376 | 3.40E-52 | -1.69E-46 |
MS.gene05595 | MS.gene83565 | -0.814464 | 1.52E-51 | -1.69E-46 |
MS.gene057469 | MS.gene83565 | -0.818705 | 1.71E-52 | -1.69E-46 |
MS.gene058949 | MS.gene83565 | -0.802312 | 5.96E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83565.t1 | MTR_5g072530 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 4.62e-60 | 177 |
MS.gene83565.t1 | MTR_2g104440 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 4.62e-60 | 177 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83565.t1 | AT4G30330 | 89.773 | 88 | 9 | 0 | 1 | 88 | 1 | 88 | 4.45e-55 | 165 |
MS.gene83565.t1 | AT2G18740 | 89.773 | 88 | 9 | 0 | 1 | 88 | 1 | 88 | 5.93e-55 | 165 |
MS.gene83565.t1 | AT2G18740 | 87.324 | 71 | 9 | 0 | 1 | 71 | 1 | 71 | 2.53e-42 | 133 |
Find 13 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAATACATGAATTTGGTTT+TGG | 0.297744 | 2.2:+985005 | MS.gene83565:CDS |
TCAGGGAGGATCCTTCTTAA+AGG | 0.324647 | 2.2:+985152 | MS.gene83565:intron |
GCAAAGCGCGGATTCAGATT+TGG | 0.362553 | 2.2:+983413 | MS.gene83565:CDS |
CAAAAGGATTTGAGGATTGA+AGG | 0.404712 | 2.2:+983445 | MS.gene83565:CDS |
GGTCATGACCCTTTGAACTT+TGG | 0.450628 | 2.2:-983278 | None:intergenic |
TTATGTTGTCTCCTTTAAGA+AGG | 0.459912 | 2.2:-985163 | None:intergenic |
ACAAATTTCAGGGGTAAATG+AGG | 0.483171 | 2.2:+985280 | MS.gene83565:intron |
GAGAAAGCATACAATGGGTT+GGG | 0.488064 | 2.2:-983299 | None:intergenic |
GGCGAGCACCAAAGTTCAAA+GGG | 0.524848 | 2.2:+983270 | MS.gene83565:CDS |
TTGAACTTTGGTGCTCGCCA+TGG | 0.529943 | 2.2:-983266 | None:intergenic |
TGAGAAAGCATACAATGGGT+TGG | 0.551589 | 2.2:-983300 | None:intergenic |
TGGCGAGCACCAAAGTTCAA+AGG | 0.558128 | 2.2:+983269 | MS.gene83565:CDS |
GATTTCTTCAAAGCAAAGCG+CGG | 0.674013 | 2.2:+983401 | MS.gene83565:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAAATCATTGTTTTTTA+TGG | + | chr2.2:983505-983524 | MS.gene83565:intron | 10.0% |
!!! | TTTTCTTTTTGTTATAAATA+GGG | + | chr2.2:984976-984995 | MS.gene83565:intron | 10.0% |
!!! | TTTTTCTTTTTGTTATAAAT+AGG | + | chr2.2:984975-984994 | MS.gene83565:intron | 10.0% |
!! | AAATCATTTCACTTAAATTT+AGG | - | chr2.2:985254-985273 | None:intergenic | 15.0% |
!! | AAATTAATAAACCAAAAGAC+AGG | - | chr2.2:984289-984308 | None:intergenic | 20.0% |
!! | AACTTTAATACTAACTTCAA+AGG | + | chr2.2:984609-984628 | MS.gene83565:intron | 20.0% |
!! | ATTTGTAAATTAAGTTATGC+TGG | - | chr2.2:984058-984077 | None:intergenic | 20.0% |
!! | TTGAAGTTAGTATTAAAGTT+AGG | - | chr2.2:984609-984628 | None:intergenic | 20.0% |
!! | TTGTTAAAGAGAAATTGAAA+GGG | - | chr2.2:983337-983356 | None:intergenic | 20.0% |
!! | TTTGTAAATTAAGTTATGCT+GGG | - | chr2.2:984057-984076 | None:intergenic | 20.0% |
!!! | AAATGTTTGCTTATTGTTTT+TGG | + | chr2.2:984889-984908 | MS.gene83565:intron | 20.0% |
!!! | AAGTTCTGAGAAAAAAAAAA+CGG | - | chr2.2:983373-983392 | None:intergenic | 20.0% |
!!! | ATTTGCTTTTACAAATTTCA+GGG | + | chr2.2:985270-985289 | MS.gene83565:intron | 20.0% |
!!! | TGAATCTAGCTAATTTTATA+GGG | - | chr2.2:983774-983793 | None:intergenic | 20.0% |
!!! | TTTTGATGAATACATGAATT+TGG | + | chr2.2:984999-985018 | MS.gene83565:CDS | 20.0% |
! | AAGTGTAATATTTCTTAGAG+AGG | - | chr2.2:984732-984751 | None:intergenic | 25.0% |
! | AGAAAAAAAAAACGGAGATT+AGG | - | chr2.2:983365-983384 | None:intergenic | 25.0% |
! | AGTTACTAGAAAATGAATGA+TGG | - | chr2.2:984203-984222 | None:intergenic | 25.0% |
! | GTTGTTAAAGAGAAATTGAA+AGG | - | chr2.2:983338-983357 | None:intergenic | 25.0% |
! | TTTCAAATTGGATATTTGAG+TGG | + | chr2.2:984934-984953 | MS.gene83565:intron | 25.0% |
!! | AATCTAGCTAATTTTATAGG+GGG | - | chr2.2:983772-983791 | None:intergenic | 25.0% |
!! | ATTTCAAAATGTTGCGATTT+TGG | + | chr2.2:983746-983765 | MS.gene83565:intron | 25.0% |
!! | GAATCTAGCTAATTTTATAG+GGG | - | chr2.2:983773-983792 | None:intergenic | 25.0% |
!! | GAATTTTGTATTTCAAACTG+AGG | + | chr2.2:984631-984650 | MS.gene83565:intron | 25.0% |
!! | GAGATTCAAATTCAAAGTTT+TGG | - | chr2.2:984803-984822 | None:intergenic | 25.0% |
!! | GTGAATCTAGCTAATTTTAT+AGG | - | chr2.2:983775-983794 | None:intergenic | 25.0% |
!! | TGAATCTAGCTAATTTTACA+TGG | - | chr2.2:983651-983670 | None:intergenic | 25.0% |
!!! | ATCGCAACATTTTGAAATTT+AGG | - | chr2.2:983744-983763 | None:intergenic | 25.0% |
!!! | ATGATGTTATTGTTTTGATC+AGG | + | chr2.2:985134-985153 | MS.gene83565:intron | 25.0% |
!!! | ATTCAAAGTTTTGGATAACA+TGG | - | chr2.2:984794-984813 | None:intergenic | 25.0% |
!!! | GATTTGCTTTTACAAATTTC+AGG | + | chr2.2:985269-985288 | MS.gene83565:intron | 25.0% |
!!! | GCATTTTCATCTATTTCTAT+GGG | + | chr2.2:985220-985239 | MS.gene83565:intron | 25.0% |
!!! | TCGCAACATTTTGAAATTTA+GGG | - | chr2.2:983743-983762 | None:intergenic | 25.0% |
!!! | TGAATACATGAATTTGGTTT+TGG | + | chr2.2:985005-985024 | MS.gene83565:CDS | 25.0% |
!!! | TGATGTTATTGTTTTGATCA+GGG | + | chr2.2:985135-985154 | MS.gene83565:intron | 25.0% |
!!! | TGCATTTTCATCTATTTCTA+TGG | + | chr2.2:985219-985238 | MS.gene83565:intron | 25.0% |
!!! | TTTATGGCATGTTTTAGAAT+AGG | + | chr2.2:983521-983540 | MS.gene83565:intron | 25.0% |
!!! | TTTGCTTTTACAAATTTCAG+GGG | + | chr2.2:985271-985290 | MS.gene83565:intron | 25.0% |
AAATTGGATATTTGAGTGGT+TGG | + | chr2.2:984938-984957 | MS.gene83565:intron | 30.0% | |
AATTTCAGATCATCTCTTCT+AGG | - | chr2.2:984537-984556 | None:intergenic | 30.0% | |
ACATGGTACTCATTTCAAAT+TGG | + | chr2.2:984922-984941 | MS.gene83565:intron | 30.0% | |
AGTTATTTGGATTCTGATTC+TGG | + | chr2.2:984357-984376 | MS.gene83565:intron | 30.0% | |
ATTCATGAGCTCATTTCTTA+GGG | + | chr2.2:984864-984883 | MS.gene83565:intron | 30.0% | |
GGAGCATAATGGTTATTTAT+TGG | + | chr2.2:983698-983717 | MS.gene83565:intron | 30.0% | |
TTCCAAATCGATAAACTACA+AGG | - | chr2.2:984231-984250 | None:intergenic | 30.0% | |
TTCTTATCTCTTCTTTCAGA+GGG | - | chr2.2:984679-984698 | None:intergenic | 30.0% | |
TTTCTTATCTCTTCTTTCAG+AGG | - | chr2.2:984680-984699 | None:intergenic | 30.0% | |
TTTGATACCTAGAGTTATTG+AGG | - | chr2.2:983606-983625 | None:intergenic | 30.0% | |
TTTGTCTCTTTCAACAGTTT+AGG | + | chr2.2:984824-984843 | MS.gene83565:intron | 30.0% | |
! | AACCTTGTAGTTTATCGATT+TGG | + | chr2.2:984226-984245 | MS.gene83565:intron | 30.0% |
! | ACTAGAAAATGAATGATGGA+TGG | - | chr2.2:984199-984218 | None:intergenic | 30.0% |
! | ATAGTGTTTTGCACAATACA+AGG | - | chr2.2:983929-983948 | None:intergenic | 30.0% |
! | TTATGTTGTCTCCTTTAAGA+AGG | - | chr2.2:985166-985185 | None:intergenic | 30.0% |
!! | GTTTGTTGATGGTTTACATT+GGG | - | chr2.2:983998-984017 | None:intergenic | 30.0% |
!! | TGTCTTATTTGTGGATGTTA+GGG | + | chr2.2:984493-984512 | MS.gene83565:intron | 30.0% |
!! | TTTTTGAGCAAAAGGATTTG+AGG | + | chr2.2:983437-983456 | MS.gene83565:CDS | 30.0% |
!! | TTTTTGGTATAGAGTGTACA+TGG | + | chr2.2:984905-984924 | MS.gene83565:intron | 30.0% |
!!! | AGTTTTGGATAACATGGATT+TGG | - | chr2.2:984788-984807 | None:intergenic | 30.0% |
!!! | CCATTGTTTTAAACATGTCT+CGG | - | chr2.2:983849-983868 | None:intergenic | 30.0% |
!!! | CGCAACATTTTGAAATTTAG+GGG | - | chr2.2:983742-983761 | None:intergenic | 30.0% |
!!! | GCAACATTTTGAAATTTAGG+GGG | - | chr2.2:983741-983760 | None:intergenic | 30.0% |
AAGAAGAGCAAAAAGACACT+AGG | + | chr2.2:985054-985073 | MS.gene83565:CDS | 35.0% | |
AATAAACTACAAGGCTGAGT+TGG | - | chr2.2:984145-984164 | None:intergenic | 35.0% | |
AATCCTAAGTTTATGAGCTG+GGG | - | chr2.2:984449-984468 | None:intergenic | 35.0% | |
ATAAACTACAAGGCTGAGTT+GGG | - | chr2.2:984144-984163 | None:intergenic | 35.0% | |
ATCAACCACTGTATAGACTA+TGG | + | chr2.2:984560-984579 | MS.gene83565:intron | 35.0% | |
ATGTAAACCATCAACAAACG+AGG | + | chr2.2:983999-984018 | MS.gene83565:intron | 35.0% | |
CAAAAGGATTTGAGGATTGA+AGG | + | chr2.2:983445-983464 | MS.gene83565:CDS | 35.0% | |
CAATCCTAAGTTTATGAGCT+GGG | - | chr2.2:984450-984469 | None:intergenic | 35.0% | |
CAGAAAATGCATATGTTGCA+AGG | - | chr2.2:985113-985132 | None:intergenic | 35.0% | |
GAATTCTGATGCTATGATTG+TGG | + | chr2.2:984322-984341 | MS.gene83565:intron | 35.0% | |
GATTCATGAGCTCATTTCTT+AGG | + | chr2.2:984863-984882 | MS.gene83565:intron | 35.0% | |
GATTCGTTGCTCTAGTTATT+TGG | + | chr2.2:984344-984363 | MS.gene83565:intron | 35.0% | |
TCTTATCTCTTCTTTCAGAG+GGG | - | chr2.2:984678-984697 | None:intergenic | 35.0% | |
TGCACTGTCTACATTTATCT+TGG | + | chr2.2:984762-984781 | MS.gene83565:intron | 35.0% | |
TTCATGAGCTCATTTCTTAG+GGG | + | chr2.2:984865-984884 | MS.gene83565:intron | 35.0% | |
! | AGTGATGAGAAAGCATACAA+TGG | - | chr2.2:983308-983327 | None:intergenic | 35.0% |
! | ATTCACCAAGTTAGTCTGTT+AGG | - | chr2.2:984118-984137 | None:intergenic | 35.0% |
! | CCGAGACATGTTTAAAACAA+TGG | + | chr2.2:983846-983865 | MS.gene83565:intron | 35.0% |
! | GATATTTGAGTGGTTGGTTA+AGG | + | chr2.2:984944-984963 | MS.gene83565:intron | 35.0% |
! | GTCACTATGCTTTTCAATCT+CGG | + | chr2.2:983557-983576 | MS.gene83565:intron | 35.0% |
! | GTGATGAGAAAGCATACAAT+GGG | - | chr2.2:983307-983326 | None:intergenic | 35.0% |
! | GTTTGTTAAGAAACCCCAAA+TGG | + | chr2.2:983878-983897 | MS.gene83565:intron | 35.0% |
!! | CGTTTGTTGATGGTTTACAT+TGG | - | chr2.2:983999-984018 | None:intergenic | 35.0% |
!! | CTGTCTTATTTGTGGATGTT+AGG | + | chr2.2:984492-984511 | MS.gene83565:intron | 35.0% |
!!! | AGGATTGGTGGTTAGTTTTT+GGG | + | chr2.2:984463-984482 | MS.gene83565:intron | 35.0% |
!!! | ATGGCATGTTTTAGAATAGG+AGG | + | chr2.2:983524-983543 | MS.gene83565:intron | 35.0% |
!!! | GATTTGGCTTTTTGAGCAAA+AGG | + | chr2.2:983429-983448 | MS.gene83565:CDS | 35.0% |
!!! | TAGGATTGGTGGTTAGTTTT+TGG | + | chr2.2:984462-984481 | MS.gene83565:intron | 35.0% |
!!! | TGTTATTGTTTTGATCAGGG+AGG | + | chr2.2:985138-985157 | MS.gene83565:intron | 35.0% |
AACCACTGTATAGACTATGG+AGG | + | chr2.2:984563-984582 | MS.gene83565:intron | 40.0% | |
CCAATCCTAAGTTTATGAGC+TGG | - | chr2.2:984451-984470 | None:intergenic | 40.0% | |
CCAGCTCATAAACTTAGGAT+TGG | + | chr2.2:984448-984467 | MS.gene83565:intron | 40.0% | |
GACTTGGCGAATAAACTACA+AGG | - | chr2.2:984154-984173 | None:intergenic | 40.0% | |
GAGTGCTACAACTGTAAGAT+AGG | - | chr2.2:983952-983971 | None:intergenic | 40.0% | |
GATTTCTTCAAAGCAAAGCG+CGG | + | chr2.2:983401-983420 | MS.gene83565:CDS | 40.0% | |
GCTCATAAACTTAGGATTGG+TGG | + | chr2.2:984451-984470 | MS.gene83565:intron | 40.0% | |
TAAACCATCAACAAACGAGG+TGG | + | chr2.2:984002-984021 | MS.gene83565:intron | 40.0% | |
TAAGTTATGCTGGGAGCTAT+GGG | - | chr2.2:984048-984067 | None:intergenic | 40.0% | |
TCATGTGCCTCAATAACTCT+AGG | + | chr2.2:983596-983615 | MS.gene83565:intron | 40.0% | |
TGAATAAGCCCATTATTGCG+AGG | + | chr2.2:984087-984106 | MS.gene83565:intron | 40.0% | |
TTAAGTTATGCTGGGAGCTA+TGG | - | chr2.2:984049-984068 | None:intergenic | 40.0% | |
TTGCACCTAACAGACTAACT+TGG | + | chr2.2:984110-984129 | MS.gene83565:intron | 40.0% | |
! | ATTCTGATTCTGGTTAGACC+TGG | + | chr2.2:984367-984386 | MS.gene83565:intron | 40.0% |
! | CAATACAAGGCATTACCCTT+CGG | - | chr2.2:983916-983935 | None:intergenic | 40.0% |
! | GAGAAAGCATACAATGGGTT+GGG | - | chr2.2:983302-983321 | None:intergenic | 40.0% |
! | TGAACATGTCTGGAGCATAA+TGG | + | chr2.2:983687-983706 | MS.gene83565:intron | 40.0% |
! | TGAGAAAGCATACAATGGGT+TGG | - | chr2.2:983303-983322 | None:intergenic | 40.0% |
!! | AAATGAATGATGGATGGACG+AGG | - | chr2.2:984193-984212 | None:intergenic | 40.0% |
!!! | GGATTGGTGGTTAGTTTTTG+GGG | + | chr2.2:984464-984483 | MS.gene83565:intron | 40.0% |
AAGTTATGCTGGGAGCTATG+GGG | - | chr2.2:984047-984066 | None:intergenic | 45.0% | |
AGGTGCAACCTCGCAATAAT+GGG | - | chr2.2:984098-984117 | None:intergenic | 45.0% | |
CAAAAGACAGGTTCACAACC+TGG | - | chr2.2:984277-984296 | None:intergenic | 45.0% | |
CTAAGTTTATGAGCTGGGGT+GGG | - | chr2.2:984445-984464 | None:intergenic | 45.0% | |
GATGGTTTACATTGGGCTGT+TGG | - | chr2.2:983991-984010 | None:intergenic | 45.0% | |
GGTCATGACCCTTTGAACTT+TGG | - | chr2.2:983281-983300 | None:intergenic | 45.0% | |
TAGCTAGATTCACGAGCTTG+AGG | + | chr2.2:983659-983678 | MS.gene83565:intron | 45.0% | |
TAGGTGCAACCTCGCAATAA+TGG | - | chr2.2:984099-984118 | None:intergenic | 45.0% | |
TCAGGGAGGATCCTTCTTAA+AGG | + | chr2.2:985152-985171 | MS.gene83565:intron | 45.0% | |
TGAGGACGATTGAACATGTC+TGG | + | chr2.2:983677-983696 | MS.gene83565:intron | 45.0% | |
TGCCTCCATAGTCTATACAG+TGG | - | chr2.2:984568-984587 | None:intergenic | 45.0% | |
TTATGCTGTTGTTGTGTGCC+AGG | + | chr2.2:984256-984275 | MS.gene83565:intron | 45.0% | |
! | ACATCCACCTCGTTTGTTGA+TGG | - | chr2.2:984009-984028 | None:intergenic | 45.0% |
! | CAGGTTGTGAACCTGTCTTT+TGG | + | chr2.2:984275-984294 | MS.gene83565:intron | 45.0% |
!! | GGGTTCAGCTGTCTTATTTG+TGG | + | chr2.2:984484-984503 | MS.gene83565:intron | 45.0% |
AACGAGGTGGATGTGTTGTC+TGG | + | chr2.2:984015-984034 | MS.gene83565:intron | 50.0% | |
ATTCGCCAAGTCAGCCTGTT+AGG | + | chr2.2:984162-984181 | MS.gene83565:intron | 50.0% | |
CCACCCCAGCTCATAAACTT+AGG | + | chr2.2:984443-984462 | MS.gene83565:intron | 50.0% | |
CCTAAGTTTATGAGCTGGGG+TGG | - | chr2.2:984446-984465 | None:intergenic | 50.0% | |
GCAAAGCGCGGATTCAGATT+TGG | + | chr2.2:983413-983432 | MS.gene83565:CDS | 50.0% | |
GGCGAGCACCAAAGTTCAAA+GGG | + | chr2.2:983270-983289 | MS.gene83565:CDS | 50.0% | |
TAGTCTGGTCTGGTTAGACC+AGG | + | chr2.2:984406-984425 | MS.gene83565:intron | 50.0% | |
TGGCGAGCACCAAAGTTCAA+AGG | + | chr2.2:983269-983288 | MS.gene83565:CDS | 50.0% | |
TGGGCTGTTGGATGCATACA+TGG | - | chr2.2:983979-983998 | None:intergenic | 50.0% | |
TTGCACCTAACAGGCTGACT+TGG | - | chr2.2:984170-984189 | None:intergenic | 50.0% | |
! | GCTGTTGCATCTGCCATTTG+GGG | - | chr2.2:983894-983913 | None:intergenic | 50.0% |
! | GGCTGTTGCATCTGCCATTT+GGG | - | chr2.2:983895-983914 | None:intergenic | 50.0% |
AGACCAGACTAGAGCAGACC+TGG | - | chr2.2:984397-984416 | None:intergenic | 55.0% | |
AGGTCTGCTCTAGTCTGGTC+TGG | + | chr2.2:984396-984415 | MS.gene83565:intron | 55.0% | |
ATGGCAGATGCAACAGCCGA+AGG | + | chr2.2:983897-983916 | MS.gene83565:intron | 55.0% | |
CGGCTGTTGCATCTGCCATT+TGG | - | chr2.2:983896-983915 | None:intergenic | 55.0% | |
TGGACGAGGTTGCACCTAAC+AGG | - | chr2.2:984179-984198 | None:intergenic | 55.0% | |
TGGCAGATGCAACAGCCGAA+GGG | + | chr2.2:983898-983917 | MS.gene83565:intron | 55.0% | |
CAGACTAGAGCAGACCTGGC+TGG | - | chr2.2:984393-984412 | None:intergenic | 60.0% | |
CAGCCAGGTCTGCTCTAGTC+TGG | + | chr2.2:984391-984410 | MS.gene83565:intron | 60.0% | |
CTGGTTAGACCTGGCCAGCC+AGG | + | chr2.2:984376-984395 | MS.gene83565:intron | 65.0% | |
! | TAGAGCAGACCTGGCTGGCC+AGG | - | chr2.2:984388-984407 | None:intergenic | 65.0% |
TGAGCTGGGGTGGGCAGACG+TGG | - | chr2.2:984436-984455 | None:intergenic | 70.0% | |
CTGGGGTGGGCAGACGTGGC+TGG | - | chr2.2:984432-984451 | None:intergenic | 75.0% | |
! | GTGGGCAGACGTGGCTGGCC+TGG | - | chr2.2:984427-984446 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 983268 | 985300 | 983268 | ID=MS.gene83565 |
chr2.2 | mRNA | 983268 | 985300 | 983268 | ID=MS.gene83565.t1;Parent=MS.gene83565 |
chr2.2 | exon | 983268 | 983309 | 983268 | ID=MS.gene83565.t1.exon1;Parent=MS.gene83565.t1 |
chr2.2 | CDS | 983268 | 983309 | 983268 | ID=cds.MS.gene83565.t1;Parent=MS.gene83565.t1 |
chr2.2 | exon | 983388 | 983477 | 983388 | ID=MS.gene83565.t1.exon2;Parent=MS.gene83565.t1 |
chr2.2 | CDS | 983388 | 983477 | 983388 | ID=cds.MS.gene83565.t1;Parent=MS.gene83565.t1 |
chr2.2 | exon | 984997 | 985075 | 984997 | ID=MS.gene83565.t1.exon3;Parent=MS.gene83565.t1 |
chr2.2 | CDS | 984997 | 985075 | 984997 | ID=cds.MS.gene83565.t1;Parent=MS.gene83565.t1 |
chr2.2 | exon | 985156 | 985201 | 985156 | ID=MS.gene83565.t1.exon4;Parent=MS.gene83565.t1 |
chr2.2 | CDS | 985156 | 985201 | 985156 | ID=cds.MS.gene83565.t1;Parent=MS.gene83565.t1 |
chr2.2 | exon | 985291 | 985300 | 985291 | ID=MS.gene83565.t1.exon5;Parent=MS.gene83565.t1 |
chr2.2 | CDS | 985291 | 985300 | 985291 | ID=cds.MS.gene83565.t1;Parent=MS.gene83565.t1 |
Gene Sequence |
Protein sequence |