Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017556.01.T01 | XP_024633688.1 | 97.887 | 142 | 1 | 1 | 1 | 140 | 1 | 142 | 1.55E-89 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017556.01.T01 | Q6K9C3 | 69.027 | 113 | 23 | 1 | 1 | 113 | 1 | 101 | 7.62E-52 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017556.01.T01 | A0A396IYF2 | 97.887 | 142 | 1 | 1 | 1 | 140 | 1 | 142 | 7.39e-90 | 268 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048216.01 | MsG0380017556.01 | 0.819979 | 8.737655e-53 | 6.826483e-50 |
| MsG0080048383.01 | MsG0380017556.01 | 0.821650 | 3.607805e-53 | 2.952637e-50 |
| MsG0080048687.01 | MsG0380017556.01 | 0.895709 | 7.403161e-76 | 7.766539e-72 |
| MsG0080048843.01 | MsG0380017556.01 | 0.810831 | 9.479558e-51 | 5.774506e-48 |
| MsG0080048968.01 | MsG0380017556.01 | 0.829902 | 3.970278e-55 | 4.119072e-52 |
| MsG0080048971.01 | MsG0380017556.01 | 0.849314 | 3.502364e-60 | 6.613237e-57 |
| MsG0180000339.01 | MsG0380017556.01 | 0.824944 | 6.132655e-54 | 5.512077e-51 |
| MsG0180000580.01 | MsG0380017556.01 | 0.817104 | 3.920132e-52 | 2.828804e-49 |
| MsG0180001237.01 | MsG0380017556.01 | 0.801385 | 9.232314e-49 | 4.403072e-46 |
| MsG0180001599.01 | MsG0380017556.01 | 0.835330 | 1.787045e-56 | 2.178454e-53 |
| MsG0180002283.01 | MsG0380017556.01 | 0.813244 | 2.823561e-51 | 1.834068e-48 |
| MsG0180002489.01 | MsG0380017556.01 | 0.817054 | 4.023664e-52 | 2.899659e-49 |
| MsG0180002491.01 | MsG0380017556.01 | 0.812574 | 3.959202e-51 | 2.526360e-48 |
| MsG0180003115.01 | MsG0380017556.01 | 0.805754 | 1.145885e-49 | 6.112164e-47 |
| MsG0180003612.01 | MsG0380017556.01 | 0.811689 | 6.175966e-51 | 3.848113e-48 |
| MsG0180003744.01 | MsG0380017556.01 | 0.808798 | 2.594454e-50 | 1.497401e-47 |
| MsG0180003793.01 | MsG0380017556.01 | 0.888229 | 7.101524e-73 | 5.454476e-69 |
| MsG0180003984.01 | MsG0380017556.01 | 0.837797 | 4.204535e-57 | 5.522747e-54 |
| MsG0180004009.01 | MsG0380017556.01 | 0.851432 | 8.907189e-61 | 1.802660e-57 |
| MsG0180004016.01 | MsG0380017556.01 | 0.840937 | 6.435555e-58 | 9.309783e-55 |
| MsG0180004050.01 | MsG0380017556.01 | 0.851424 | 8.953920e-61 | 1.811675e-57 |
| MsG0180004129.01 | MsG0380017556.01 | 0.820268 | 7.503423e-53 | 5.909151e-50 |
| MsG0180004130.01 | MsG0380017556.01 | 0.859259 | 4.679312e-63 | 1.228110e-59 |
| MsG0180004398.01 | MsG0380017556.01 | 0.833881 | 4.132499e-56 | 4.823056e-53 |
| MsG0180004767.01 | MsG0380017556.01 | 0.830655 | 2.599194e-55 | 2.755896e-52 |
| MsG0180004854.01 | MsG0380017556.01 | 0.836153 | 1.105362e-56 | 1.381185e-53 |
| MsG0180004861.01 | MsG0380017556.01 | 0.828017 | 1.135411e-54 | 1.114891e-51 |
| MsG0180004991.01 | MsG0380017556.01 | 0.817001 | 4.135282e-52 | 2.975874e-49 |
| MsG0180005324.01 | MsG0380017556.01 | 0.824242 | 8.977431e-54 | 7.906979e-51 |
| MsG0180005366.01 | MsG0380017556.01 | 0.800382 | 1.479302e-48 | 6.878496e-46 |
| MsG0180005426.01 | MsG0380017556.01 | 0.806405 | 8.358303e-50 | 4.532742e-47 |
| MsG0180005765.01 | MsG0380017556.01 | 0.801812 | 7.546703e-49 | 3.638301e-46 |
| MsG0180006013.01 | MsG0380017556.01 | 0.827904 | 1.209255e-54 | 1.183324e-51 |
| MsG0280006305.01 | MsG0380017556.01 | 0.817244 | 3.646417e-52 | 2.641363e-49 |
| MsG0280010801.01 | MsG0380017556.01 | 0.886580 | 3.023433e-72 | 2.172052e-68 |
| MsG0380011614.01 | MsG0380017556.01 | 0.810118 | 1.351221e-50 | 8.077099e-48 |
| MsG0380012073.01 | MsG0380017556.01 | 0.895398 | 9.951808e-76 | 1.030872e-71 |
| MsG0380013579.01 | MsG0380017556.01 | 0.829561 | 4.804516e-55 | 4.934742e-52 |
| MsG0380013641.01 | MsG0380017556.01 | 0.806165 | 9.392911e-50 | 5.062966e-47 |
| MsG0380014330.01 | MsG0380017556.01 | 0.806677 | 7.323462e-50 | 3.999138e-47 |
| MsG0380014539.01 | MsG0380017556.01 | 0.850414 | 1.724263e-60 | 3.375086e-57 |
| MsG0380014541.01 | MsG0380017556.01 | 0.807100 | 5.959961e-50 | 3.290413e-47 |
| MsG0380014885.01 | MsG0380017556.01 | 0.802311 | 5.959521e-49 | 2.909985e-46 |
| MsG0380015027.01 | MsG0380017556.01 | 0.805809 | 1.115577e-49 | 5.958708e-47 |
| MsG0380015512.01 | MsG0380017556.01 | 0.809666 | 1.690340e-50 | 9.985335e-48 |
| MsG0380015818.01 | MsG0380017556.01 | 0.807376 | 5.209629e-50 | 2.897000e-47 |
| MsG0380015831.01 | MsG0380017556.01 | 0.804235 | 2.381027e-49 | 1.221211e-46 |
| MsG0380016290.01 | MsG0380017556.01 | 0.801185 | 1.014616e-48 | 4.814567e-46 |
| MsG0380016389.01 | MsG0380017556.01 | 0.841803 | 3.806365e-58 | 5.656557e-55 |
| MsG0380016513.01 | MsG0380017556.01 | 0.809331 | 1.995064e-50 | 1.168029e-47 |
| MsG0380016604.01 | MsG0380017556.01 | 0.804199 | 2.423080e-49 | 1.241644e-46 |
| MsG0380016636.01 | MsG0380017556.01 | 0.807583 | 4.709547e-50 | 2.632856e-47 |
| MsG0380017382.01 | MsG0380017556.01 | 0.821997 | 2.997771e-53 | 2.477724e-50 |
| MsG0380017476.01 | MsG0380017556.01 | 0.830676 | 2.568001e-55 | 2.724684e-52 |
| MsG0380017556.01 | MsG0480018084.01 | 0.826584 | 2.503688e-54 | 2.357625e-51 |
| MsG0380017556.01 | MsG0480018335.01 | 0.835952 | 1.243520e-56 | 1.544176e-53 |
| MsG0380017556.01 | MsG0480018477.01 | 0.882738 | 8.095847e-71 | 4.989917e-67 |
| MsG0380017556.01 | MsG0480019879.01 | 0.802755 | 4.826505e-49 | 2.383478e-46 |
| MsG0380017556.01 | MsG0480021006.01 | 0.809939 | 1.476714e-50 | 8.785880e-48 |
| MsG0380017556.01 | MsG0480021432.01 | 0.838177 | 3.356628e-57 | 4.459730e-54 |
| MsG0380017556.01 | MsG0480021448.01 | 0.807495 | 4.916946e-50 | 2.742757e-47 |
| MsG0380017556.01 | MsG0480021832.01 | 0.833130 | 6.365534e-56 | 7.264065e-53 |
| MsG0380017556.01 | MsG0480022183.01 | 0.818327 | 2.076851e-52 | 1.549844e-49 |
| MsG0380017556.01 | MsG0480022223.01 | 0.807318 | 5.359065e-50 | 2.975722e-47 |
| MsG0380017556.01 | MsG0480022678.01 | 0.815920 | 7.218159e-52 | 5.042515e-49 |
| MsG0380017556.01 | MsG0480022960.01 | 0.846647 | 1.904279e-59 | 3.300222e-56 |
| MsG0380017556.01 | MsG0480023149.01 | 0.895364 | 1.027832e-75 | 1.063075e-71 |
| MsG0380017556.01 | MsG0480023240.01 | 0.868158 | 8.040357e-66 | 2.879493e-62 |
| MsG0380017556.01 | MsG0480023447.01 | 0.830841 | 2.339724e-55 | 2.494524e-52 |
| MsG0380017556.01 | MsG0480023467.01 | 0.824776 | 6.721412e-54 | 6.012299e-51 |
| MsG0380017556.01 | MsG0480023559.01 | 0.867179 | 1.656104e-65 | 5.728222e-62 |
| MsG0380017556.01 | MsG0580024191.01 | 0.849198 | 3.772366e-60 | 7.097276e-57 |
| MsG0380017556.01 | MsG0580024339.01 | 0.843986 | 9.997045e-59 | 1.591285e-55 |
| MsG0380017556.01 | MsG0580024369.01 | 0.808131 | 3.601553e-50 | 2.042696e-47 |
| MsG0380017556.01 | MsG0580024536.01 | 0.802957 | 4.384612e-49 | 2.176328e-46 |
| MsG0380017556.01 | MsG0580025408.01 | 0.817393 | 3.376138e-52 | 2.455677e-49 |
| MsG0380017556.01 | MsG0580026157.01 | 0.867751 | 1.086506e-65 | 3.835677e-62 |
| MsG0380017556.01 | MsG0580027043.01 | 0.855060 | 8.124435e-62 | 1.852172e-58 |
| MsG0380017556.01 | MsG0580028597.01 | 0.813896 | 2.028989e-51 | 1.341608e-48 |
| MsG0380017556.01 | MsG0580029132.01 | 0.888354 | 6.359217e-73 | 4.910072e-69 |
| MsG0380017556.01 | MsG0580029258.01 | 0.813995 | 1.930282e-51 | 1.279679e-48 |
| MsG0380017556.01 | MsG0580029283.01 | 0.830151 | 3.451469e-55 | 3.606434e-52 |
| MsG0380017556.01 | MsG0580029300.01 | 0.820181 | 7.855448e-53 | 6.171824e-50 |
| MsG0380017556.01 | MsG0580029801.01 | 0.817109 | 3.911090e-52 | 2.822624e-49 |
| MsG0380017556.01 | MsG0580030003.01 | 0.812520 | 4.068629e-51 | 2.592543e-48 |
| MsG0380017556.01 | MsG0680030408.01 | 0.824545 | 7.616610e-54 | 6.767656e-51 |
| MsG0380017556.01 | MsG0680030968.01 | 0.847707 | 9.750775e-60 | 1.748168e-56 |
| MsG0380017556.01 | MsG0680031628.01 | 0.802818 | 4.683688e-49 | 2.316762e-46 |
| MsG0380017556.01 | MsG0680031699.01 | 0.804518 | 2.078347e-49 | 1.073762e-46 |
| MsG0380017556.01 | MsG0680032770.01 | 0.808030 | 3.783922e-50 | 2.140382e-47 |
| MsG0380017556.01 | MsG0680034061.01 | 0.847892 | 8.675439e-60 | 1.564404e-56 |
| MsG0380017556.01 | MsG0680034671.01 | 0.820046 | 8.433871e-53 | 6.601724e-50 |
| MsG0380017556.01 | MsG0680035306.01 | 0.827043 | 1.945701e-54 | 1.856749e-51 |
| MsG0380017556.01 | MsG0680035574.01 | 0.830453 | 2.911746e-55 | 3.068788e-52 |
| MsG0380017556.01 | MsG0680035848.01 | 0.855705 | 5.272124e-62 | 1.228167e-58 |
| MsG0380017556.01 | MsG0780036240.01 | 0.865548 | 5.452530e-65 | 1.780941e-61 |
| MsG0380017556.01 | MsG0780037240.01 | 0.822047 | 2.918640e-53 | 2.415665e-50 |
| MsG0380017556.01 | MsG0780038400.01 | 0.857664 | 1.399407e-62 | 3.480355e-59 |
| MsG0380017556.01 | MsG0780038587.01 | 0.857132 | 2.009649e-62 | 4.909407e-59 |
| MsG0380017556.01 | MsG0780039340.01 | 0.835824 | 1.339675e-56 | 1.657276e-53 |
| MsG0380017556.01 | MsG0780040125.01 | 0.810880 | 9.250325e-51 | 5.642431e-48 |
| MsG0380017556.01 | MsG0780040312.01 | 0.806099 | 9.695857e-50 | 5.217291e-47 |
| MsG0380017556.01 | MsG0780040338.01 | 0.866757 | 2.257443e-65 | 7.695559e-62 |
| MsG0380017556.01 | MsG0780040569.01 | 0.844444 | 7.529747e-59 | 1.215805e-55 |
| MsG0380017556.01 | MsG0780040845.01 | 0.836423 | 9.440293e-57 | 1.189148e-53 |
| MsG0380017556.01 | MsG0780041223.01 | 0.879258 | 1.442660e-69 | 7.771167e-66 |
| MsG0380017556.01 | MsG0780041295.01 | 0.831953 | 1.245944e-55 | 1.372971e-52 |
| MsG0380017556.01 | MsG0780041423.01 | 0.835031 | 2.125475e-56 | 2.567442e-53 |
| MsG0380017556.01 | MsG0780041490.01 | 0.827718 | 1.340416e-54 | 1.304598e-51 |
| MsG0380017556.01 | MsG0880042604.01 | 0.821725 | 3.465533e-53 | 2.842240e-50 |
| MsG0380017556.01 | MsG0880042991.01 | 0.844763 | 6.181423e-59 | 1.008222e-55 |
| MsG0380017556.01 | MsG0880043592.01 | 0.824940 | 6.147157e-54 | 5.524447e-51 |
| MsG0380017556.01 | MsG0880043770.01 | 0.820039 | 8.467524e-53 | 6.626639e-50 |
| MsG0380017556.01 | MsG0880045619.01 | 0.817930 | 2.553496e-52 | 1.884897e-49 |
| MsG0380017556.01 | MsG0880045631.01 | 0.851893 | 6.595393e-61 | 1.354319e-57 |
| MsG0380017556.01 | MsG0880045656.01 | 0.862371 | 5.314955e-64 | 1.552985e-60 |
| MsG0380017556.01 | MsG0880045951.01 | 0.850301 | 1.855277e-60 | 3.617889e-57 |
| MsG0380017556.01 | MsG0880046068.01 | 0.803486 | 3.407563e-49 | 1.714496e-46 |
| MsG0380017556.01 | MsG0880046074.01 | 0.824189 | 9.238033e-54 | 8.124676e-51 |
| MsG0380017556.01 | MsG0880046177.01 | 0.886653 | 2.836952e-72 | 2.044326e-68 |
| MsG0380017556.01 | MsG0880046444.01 | 0.845831 | 3.177066e-59 | 5.362906e-56 |
| MsG0380017556.01 | MsG0880046933.01 | 0.844048 | 9.623318e-59 | 1.534902e-55 |
| MsG0380017556.01 | MsG0880047082.01 | 0.807505 | 4.892801e-50 | 2.730017e-47 |
| MsG0380017556.01 | MsG0880047388.01 | 0.820583 | 6.353691e-53 | 5.047200e-50 |
| MsG0380017556.01 | MsG0880047428.01 | 0.844738 | 6.275262e-59 | 1.022799e-55 |
| MsG0380017556.01 | MsG0880047470.01 | 0.804420 | 2.179088e-49 | 1.122976e-46 |
| MsG0380017556.01 | MsG0880047607.01 | 0.831788 | 1.368440e-55 | 1.500719e-52 |
| MsG0280006993.01 | MsG0380017556.01 | 0.823059 | 1.697947e-53 | 1.446523e-50 |
| MsG0280007024.01 | MsG0380017556.01 | 0.811792 | 5.865239e-51 | 3.664639e-48 |
| MsG0280007161.01 | MsG0380017556.01 | 0.835890 | 1.288978e-56 | 1.597747e-53 |
| MsG0280007847.01 | MsG0380017556.01 | 0.826743 | 2.294570e-54 | 2.170632e-51 |
| MsG0280008118.01 | MsG0380017556.01 | 0.893040 | 9.101084e-75 | 8.531435e-71 |
| MsG0280008134.01 | MsG0380017556.01 | 0.827083 | 1.902978e-54 | 1.818252e-51 |
| MsG0280009111.01 | MsG0380017556.01 | 0.853135 | 2.919633e-61 | 6.243777e-58 |
| MsG0280009141.01 | MsG0380017556.01 | 0.860192 | 2.452265e-63 | 6.647621e-60 |
| MsG0280009375.01 | MsG0380017556.01 | 0.826626 | 2.447180e-54 | 2.307252e-51 |
| MsG0280010002.01 | MsG0380017556.01 | 0.836224 | 1.060685e-56 | 1.328321e-53 |
| MsG0280010495.01 | MsG0380017556.01 | 0.829713 | 4.413962e-55 | 4.554335e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017556.01.T01 | MTR_7g112760 | 47.945 | 73 | 32 | 2 | 4 | 70 | 9 | 81 | 7.60e-12 | 61.2 |
| MsG0380017556.01.T01 | MTR_7g112760 | 47.945 | 73 | 32 | 2 | 4 | 70 | 9 | 81 | 9.13e-12 | 61.2 |
| MsG0380017556.01.T01 | MTR_8g058530 | 42.353 | 85 | 43 | 3 | 4 | 86 | 9 | 89 | 1.56e-11 | 60.5 |
| MsG0380017556.01.T01 | MTR_7g108810 | 42.353 | 85 | 43 | 3 | 4 | 86 | 110 | 190 | 2.00e-11 | 60.5 |
| MsG0380017556.01.T01 | MTR_3g092580 | 46.575 | 73 | 33 | 2 | 4 | 70 | 116 | 188 | 4.82e-11 | 59.3 |
| MsG0380017556.01.T01 | MTR_1g083400 | 37.838 | 111 | 61 | 4 | 4 | 106 | 40 | 150 | 5.77e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017556.01.T01 | AT4G31580 | 70.139 | 144 | 39 | 2 | 1 | 140 | 1 | 144 | 1.88e-52 | 165 |
| MsG0380017556.01.T01 | AT4G31580 | 70.139 | 144 | 39 | 2 | 1 | 140 | 1 | 144 | 1.88e-52 | 165 |
| MsG0380017556.01.T01 | AT2G24590 | 70.423 | 142 | 36 | 2 | 1 | 138 | 1 | 140 | 4.50e-47 | 151 |
| MsG0380017556.01.T01 | AT1G23860 | 68.142 | 113 | 27 | 1 | 1 | 113 | 1 | 104 | 9.68e-45 | 144 |
| MsG0380017556.01.T01 | AT1G23860 | 68.142 | 113 | 27 | 1 | 1 | 113 | 1 | 104 | 1.98e-44 | 144 |
| MsG0380017556.01.T01 | AT1G23860 | 68.142 | 113 | 27 | 1 | 1 | 113 | 1 | 104 | 1.98e-44 | 144 |
| MsG0380017556.01.T01 | AT1G23860 | 68.142 | 113 | 27 | 1 | 1 | 113 | 1 | 104 | 2.24e-44 | 144 |
| MsG0380017556.01.T01 | AT1G60650 | 37.778 | 135 | 73 | 5 | 2 | 128 | 12 | 143 | 1.27e-14 | 69.3 |
| MsG0380017556.01.T01 | AT1G60650 | 37.778 | 135 | 73 | 5 | 2 | 128 | 12 | 143 | 1.27e-14 | 69.3 |
| MsG0380017556.01.T01 | AT3G53500 | 39.474 | 114 | 61 | 3 | 2 | 115 | 11 | 116 | 3.54e-14 | 67.8 |
| MsG0380017556.01.T01 | AT2G37340 | 36.111 | 144 | 73 | 4 | 2 | 134 | 11 | 146 | 1.25e-12 | 63.5 |
| MsG0380017556.01.T01 | AT1G02840 | 49.315 | 73 | 31 | 2 | 4 | 70 | 9 | 81 | 1.31e-12 | 63.5 |
| MsG0380017556.01.T01 | AT1G02840 | 49.315 | 73 | 31 | 2 | 4 | 70 | 9 | 81 | 1.73e-12 | 63.2 |
| MsG0380017556.01.T01 | AT1G02840 | 49.315 | 73 | 31 | 2 | 4 | 70 | 9 | 81 | 1.73e-12 | 63.2 |
| MsG0380017556.01.T01 | AT1G02840 | 49.315 | 73 | 31 | 2 | 4 | 70 | 9 | 81 | 1.73e-12 | 63.2 |
| MsG0380017556.01.T01 | AT1G02840 | 49.315 | 73 | 31 | 2 | 4 | 70 | 9 | 81 | 4.10e-12 | 62.0 |
| MsG0380017556.01.T01 | AT4G02430 | 45.205 | 73 | 34 | 2 | 4 | 70 | 9 | 81 | 2.50e-11 | 58.5 |
| MsG0380017556.01.T01 | AT4G02430 | 45.205 | 73 | 34 | 2 | 4 | 70 | 9 | 81 | 8.77e-11 | 58.5 |
Find 52 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCACCGCTTCGTCTTT+AGG | 0.258314 | 3:-97838684 | MsG0380017556.01.T01:intron |
| ACGATGACTCGCGTGTATAT+TGG | 0.307783 | 3:-97838560 | MsG0380017556.01.T01:CDS |
| GGTGGTCGTGGTCGGTCTGG+TGG | 0.349220 | 3:-97837223 | MsG0380017556.01.T01:CDS |
| TCTCACCTTCGCCCGTAACT+TGG | 0.357635 | 3:+97837076 | None:intergenic |
| GGCAGAGGTGGTGGTGGCGG+TGG | 0.364147 | 3:-97837241 | MsG0380017556.01.T01:CDS |
| GGAGGCAGAGGTGGTGGTGG+CGG | 0.377477 | 3:-97837244 | MsG0380017556.01.T01:CDS |
| CTTTCCCACAACTCTAAAAC+TGG | 0.379511 | 3:-97837277 | MsG0380017556.01.T01:CDS |
| GATGCTATTCGTGAATTAGA+TGG | 0.383511 | 3:-97838200 | MsG0380017556.01.T01:intron |
| TTCGCAGGAGCCCAAGTTAC+GGG | 0.384074 | 3:-97837087 | MsG0380017556.01.T01:CDS |
| GTGGTCGTGGTCGGTCTGGT+GGG | 0.410108 | 3:-97837222 | MsG0380017556.01.T01:CDS |
| GGCGGTGGTCGTGGTCGGTC+TGG | 0.411463 | 3:-97837226 | MsG0380017556.01.T01:CDS |
| AATTCTGCTCGTGGTGGCTC+TGG | 0.418353 | 3:-97837139 | MsG0380017556.01.T01:CDS |
| TGGTCGTGGTCGGTCTGGTG+GGG | 0.424575 | 3:-97837221 | MsG0380017556.01.T01:CDS |
| GGTGGTGGTGGCGGTGGTCG+TGG | 0.429629 | 3:-97837235 | MsG0380017556.01.T01:CDS |
| GGTCGTGGTCGGTCTGGTGG+GGG | 0.446312 | 3:-97837220 | MsG0380017556.01.T01:CDS |
| AACTCTAAAACTGGAGGTGG+AGG | 0.458462 | 3:-97837268 | MsG0380017556.01.T01:CDS |
| TCTAAAACTGGAGGTGGAGG+GGG | 0.464202 | 3:-97837265 | MsG0380017556.01.T01:CDS |
| CTCTAAAACTGGAGGTGGAG+GGG | 0.483831 | 3:-97837266 | MsG0380017556.01.T01:CDS |
| TTTCGCAGGAGCCCAAGTTA+CGG | 0.496285 | 3:-97837088 | MsG0380017556.01.T01:CDS |
| GTGGTGGCGGTGGTCGTGGT+CGG | 0.497625 | 3:-97837231 | MsG0380017556.01.T01:CDS |
| TGTGTAGTGTGTGGGTTGCA+AGG | 0.503459 | 3:-97838274 | MsG0380017556.01.T01:intron |
| CTCACCTTCGCCCGTAACTT+GGG | 0.507223 | 3:+97837077 | None:intergenic |
| GTGCTACTGCAGCAGCTGCT+AGG | 0.507743 | 3:-97838724 | MsG0380017556.01.T01:five_prime_UTR |
| TGGGTTGCAAGGAGGCCTCC+TGG | 0.516078 | 3:-97838263 | MsG0380017556.01.T01:CDS |
| ACTTTGTTTGTGTAGTGTGT+GGG | 0.522844 | 3:-97838282 | MsG0380017556.01.T01:intron |
| GGAGCCCAAGTTACGGGCGA+AGG | 0.545836 | 3:-97837081 | MsG0380017556.01.T01:CDS |
| TGTTATGAGTGTGGTGAACC+TGG | 0.547859 | 3:-97837181 | MsG0380017556.01.T01:CDS |
| CACAACTCTAAAACTGGAGG+TGG | 0.548485 | 3:-97837271 | MsG0380017556.01.T01:CDS |
| CGATTCAAGAATTTCTGAGA+GGG | 0.558673 | 3:-97838531 | MsG0380017556.01.T01:CDS |
| CACTCGCGGGCAAAATGACC+AGG | 0.560672 | 3:+97837163 | None:intergenic |
| ACTCTAAAACTGGAGGTGGA+GGG | 0.564564 | 3:-97837267 | MsG0380017556.01.T01:CDS |
| GCAAAACAAGTGGATGCGGT+TGG | 0.566234 | 3:-97838805 | MsG0380017556.01.T01:five_prime_UTR |
| GCAGTCCACCTCGATTTCGC+AGG | 0.566410 | 3:-97837102 | MsG0380017556.01.T01:CDS |
| TAAAGCAAAACAAGTGGATG+CGG | 0.575298 | 3:-97838809 | MsG0380017556.01.T01:five_prime_UTR |
| CTTGGGCTCCTGCGAAATCG+AGG | 0.592257 | 3:+97837094 | None:intergenic |
| GATTTGAAATGTTATGAGTG+TGG | 0.599192 | 3:-97837190 | MsG0380017556.01.T01:CDS |
| AGTTAATAAAGCAAAACAAG+TGG | 0.605000 | 3:-97838815 | None:intergenic |
| TTCTGAACCTAAAGACGAAG+CGG | 0.614448 | 3:+97838677 | None:intergenic |
| CGCGAGTGTAATTCTGCTCG+TGG | 0.617749 | 3:-97837148 | MsG0380017556.01.T01:CDS |
| AAGTCAATGAAAGCATAACC+AGG | 0.643089 | 3:+97838245 | None:intergenic |
| ACGAGCAGAATTACACTCGC+GGG | 0.643217 | 3:+97837150 | None:intergenic |
| TGCGAAATCGAGGTGGACTG+CGG | 0.647083 | 3:+97837104 | None:intergenic |
| AATACACAAACAGTTAACAA+AGG | 0.658162 | 3:-97838753 | MsG0380017556.01.T01:five_prime_UTR |
| GGGCTCCTGCGAAATCGAGG+TGG | 0.659354 | 3:+97837097 | None:intergenic |
| GAGTGTAATTCTGCTCGTGG+TGG | 0.660472 | 3:-97837145 | MsG0380017556.01.T01:CDS |
| TCCCACAACTCTAAAACTGG+AGG | 0.668821 | 3:-97837274 | MsG0380017556.01.T01:CDS |
| CACGAGCAGAATTACACTCG+CGG | 0.671886 | 3:+97837149 | None:intergenic |
| TCGATTCAAGAATTTCTGAG+AGG | 0.687611 | 3:-97838532 | MsG0380017556.01.T01:CDS |
| GTGGTGGCTCTGGAAGACGT+CGG | 0.689675 | 3:-97837129 | MsG0380017556.01.T01:CDS |
| TAGCATCAAGCGCATCTCTG+CGG | 0.691801 | 3:+97838216 | None:intergenic |
| TCAATGAAAGCATAACCAGG+AGG | 0.752656 | 3:+97838248 | None:intergenic |
| GTAGTGTGTGGGTTGCAAGG+AGG | 0.756764 | 3:-97838271 | MsG0380017556.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAATATTATAAAATTT+TGG | + | Chr3:97838267-97838286 | None:intergenic | 0.0% |
| !! | AAGTTCAAAAATTTAAATTA+TGG | + | Chr3:97837588-97837607 | None:intergenic | 10.0% |
| !! | AAACATTAAGAAATTAACAA+AGG | + | Chr3:97837254-97837273 | None:intergenic | 15.0% |
| !! | ACATATCATATAAAATGTTA+AGG | - | Chr3:97838300-97838319 | MsG0380017556.01.T01:intron | 15.0% |
| !! | CATATCATATAAAATGTTAA+GGG | - | Chr3:97838301-97838320 | MsG0380017556.01.T01:intron | 15.0% |
| !! | GAAAATTATGTTCAAATTAA+TGG | - | Chr3:97837531-97837550 | MsG0380017556.01.T01:intron | 15.0% |
| !! | TTCTATACTAAATTAAAGTA+AGG | + | Chr3:97838237-97838256 | None:intergenic | 15.0% |
| !!! | AAACATTTTCATAATTCATT+CGG | + | Chr3:97838069-97838088 | None:intergenic | 15.0% |
| !!! | GAAAAAAGTATATCAAAATA+AGG | + | Chr3:97837872-97837891 | None:intergenic | 15.0% |
| !!! | TTTTGTTTCAATTCTAAATA+TGG | - | Chr3:97838466-97838485 | MsG0380017556.01.T01:intron | 15.0% |
| !! | AGTTTATACATAAAATCTTC+TGG | + | Chr3:97838144-97838163 | None:intergenic | 20.0% |
| !! | ATTCAAAAATCCAATTGAAT+TGG | + | Chr3:97837502-97837521 | None:intergenic | 20.0% |
| !! | TCCATAGAAGAAAAATTAAA+AGG | + | Chr3:97838562-97838581 | None:intergenic | 20.0% |
| !! | TTCAAAAATCCAATTGAATT+GGG | + | Chr3:97837501-97837520 | None:intergenic | 20.0% |
| !! | TTTCAATTCTAAATATGGAT+TGG | - | Chr3:97838471-97838490 | MsG0380017556.01.T01:intron | 20.0% |
| !!! | AGAAGATTTTATGTATAAAC+TGG | - | Chr3:97838143-97838162 | MsG0380017556.01.T01:intron | 20.0% |
| !!! | ATCAATTACTGAGAAAATTT+TGG | + | Chr3:97837768-97837787 | None:intergenic | 20.0% |
| !!! | TTCACAATCTCAATTATTTT+TGG | - | Chr3:97838363-97838382 | MsG0380017556.01.T01:intron | 20.0% |
| ! | AATACACAAACAGTTAACAA+AGG | - | Chr3:97837133-97837152 | MsG0380017556.01.T01:CDS | 25.0% |
| ! | AGTACAAATGATAGTTTAAC+AGG | + | Chr3:97837562-97837581 | None:intergenic | 25.0% |
| ! | TTATTGAAATCGATGTATAC+CGG | - | Chr3:97838394-97838413 | MsG0380017556.01.T01:intron | 25.0% |
| !! | TTTTGTGTTTAATCTGTTTC+TGG | - | Chr3:97837814-97837833 | MsG0380017556.01.T01:intron | 25.0% |
| !!! | GCCTTTTAATTTTTCTTCTA+TGG | - | Chr3:97838558-97838577 | MsG0380017556.01.T01:CDS | 25.0% |
| !!! | TCTTTAGGTTCAGAAATTTT+GGG | - | Chr3:97837217-97837236 | MsG0380017556.01.T01:CDS | 25.0% |
| AAACATTACACTGGTCAAAA+TGG | + | Chr3:97837723-97837742 | None:intergenic | 30.0% | |
| ATCATACTTCCCAATTCAAT+TGG | - | Chr3:97837489-97837508 | MsG0380017556.01.T01:intron | 30.0% | |
| TTCGTATAACTCCAAAAACA+TGG | + | Chr3:97837397-97837416 | None:intergenic | 30.0% | |
| ! | AAAAGGCACAGTAAATAGTA+GGG | + | Chr3:97838545-97838564 | None:intergenic | 30.0% |
| ! | ACCAGTGTAATGTTTTACAA+TGG | - | Chr3:97837728-97837747 | MsG0380017556.01.T01:intron | 30.0% |
| ! | GAAGATGATTTCCATGTTTT+TGG | - | Chr3:97837383-97837402 | MsG0380017556.01.T01:intron | 30.0% |
| ! | GATTTGAAATGTTATGAGTG+TGG | - | Chr3:97838696-97838715 | MsG0380017556.01.T01:five_prime_UTR | 30.0% |
| ! | TAAAAGGCACAGTAAATAGT+AGG | + | Chr3:97838546-97838565 | None:intergenic | 30.0% |
| ! | TAATTTTTCTTCTATGGAGC+AGG | - | Chr3:97838564-97838583 | MsG0380017556.01.T01:exon | 30.0% |
| ! | TTGGGAAGTATGATATTACT+TGG | + | Chr3:97837483-97837502 | None:intergenic | 30.0% |
| !! | GTCTTTAGGTTCAGAAATTT+TGG | - | Chr3:97837216-97837235 | MsG0380017556.01.T01:CDS | 30.0% |
| !!! | AGTGTGCTTTATTTTTTGCT+AGG | - | Chr3:97838437-97838456 | MsG0380017556.01.T01:intron | 30.0% |
| !!! | ATGTTTTTGGAGTTATACGA+AGG | - | Chr3:97837396-97837415 | MsG0380017556.01.T01:intron | 30.0% |
| AGCACACTAATGAAATCGTA+TGG | + | Chr3:97838425-97838444 | None:intergenic | 35.0% | |
| ATCCTTCCACTCTATTCAAT+AGG | - | Chr3:97838495-97838514 | MsG0380017556.01.T01:CDS | 35.0% | |
| CGGTGAAGATTGAAAAATGA+AGG | + | Chr3:97837192-97837211 | None:intergenic | 35.0% | |
| GATGCTATTCGTGAATTAGA+TGG | - | Chr3:97837686-97837705 | MsG0380017556.01.T01:intron | 35.0% | |
| GCCATTGTAAAACATTACAC+TGG | + | Chr3:97837732-97837751 | None:intergenic | 35.0% | |
| TATTGAACTGGATCTATGAC+CGG | - | Chr3:97838005-97838024 | MsG0380017556.01.T01:intron | 35.0% | |
| TCAGTGATGAGTAGAAGAAA+GGG | + | Chr3:97837933-97837952 | None:intergenic | 35.0% | |
| TCCTTCCACTCTATTCAATA+GGG | - | Chr3:97838496-97838515 | MsG0380017556.01.T01:CDS | 35.0% | |
| TCGATTCAAGAATTTCTGAG+AGG | - | Chr3:97837354-97837373 | MsG0380017556.01.T01:intron | 35.0% | |
| TGACCTAATTCACTGTAATG+CGG | + | Chr3:97837460-97837479 | None:intergenic | 35.0% | |
| TGGATGTGTTGAATTTGAAG+AGG | - | Chr3:97837837-97837856 | MsG0380017556.01.T01:intron | 35.0% | |
| TTCTACTCATCACTGAGAAA+CGG | - | Chr3:97837937-97837956 | MsG0380017556.01.T01:intron | 35.0% | |
| TTCTATGGAGCAGGTAAAAA+TGG | - | Chr3:97838573-97838592 | MsG0380017556.01.T01:intron | 35.0% | |
| ! | AACTTTGTTTGTGTAGTGTG+TGG | - | Chr3:97837603-97837622 | MsG0380017556.01.T01:intron | 35.0% |
| ! | AAGTCAATGAAAGCATAACC+AGG | + | Chr3:97837644-97837663 | None:intergenic | 35.0% |
| ! | ACTTTGTTTGTGTAGTGTGT+GGG | - | Chr3:97837604-97837623 | MsG0380017556.01.T01:intron | 35.0% |
| ! | CGATTCAAGAATTTCTGAGA+GGG | - | Chr3:97837355-97837374 | MsG0380017556.01.T01:intron | 35.0% |
| !! | TGTGTTTAATCTGTTTCTGG+TGG | - | Chr3:97837817-97837836 | MsG0380017556.01.T01:intron | 35.0% |
| AAGCGAACCAGACACAAATT+AGG | + | Chr3:97837295-97837314 | None:intergenic | 40.0% | |
| AGCAGGTAAAAATGGTTGGA+GGG | - | Chr3:97838581-97838600 | MsG0380017556.01.T01:intron | 40.0% | |
| AGCGAACCAGACACAAATTA+GGG | + | Chr3:97837294-97837313 | None:intergenic | 40.0% | |
| ATGAAATCGTATGGCTGAAC+CGG | + | Chr3:97838416-97838435 | None:intergenic | 40.0% | |
| ATGGAGCAGGTAAAAATGGT+TGG | - | Chr3:97838577-97838596 | MsG0380017556.01.T01:intron | 40.0% | |
| CAATATGTACAAGAGAGCAG+TGG | + | Chr3:97838199-97838218 | None:intergenic | 40.0% | |
| CATAAAATCTTCTGGCACAG+TGG | + | Chr3:97838136-97838155 | None:intergenic | 40.0% | |
| CTCAGTGATGAGTAGAAGAA+AGG | + | Chr3:97837934-97837953 | None:intergenic | 40.0% | |
| GATCAAACTGGTTATAGGTC+CGG | + | Chr3:97837964-97837983 | None:intergenic | 40.0% | |
| GATTGGAGATGCTATTGAAC+TGG | - | Chr3:97837993-97838012 | MsG0380017556.01.T01:intron | 40.0% | |
| TCCCTATTGAATAGAGTGGA+AGG | + | Chr3:97838500-97838519 | None:intergenic | 40.0% | |
| TCTCCGCATTACAGTGAATT+AGG | - | Chr3:97837454-97837473 | MsG0380017556.01.T01:intron | 40.0% | |
| TTCCACTCTATTCAATAGGG+AGG | - | Chr3:97838499-97838518 | MsG0380017556.01.T01:CDS | 40.0% | |
| TTCTGAACCTAAAGACGAAG+CGG | + | Chr3:97837212-97837231 | None:intergenic | 40.0% | |
| ! | CTCATTCCCTAATTTGTGTC+TGG | - | Chr3:97837285-97837304 | MsG0380017556.01.T01:CDS | 40.0% |
| ! | TCAATGAAAGCATAACCAGG+AGG | + | Chr3:97837641-97837660 | None:intergenic | 40.0% |
| !! | CTTTCCCACAACTCTAAAAC+TGG | - | Chr3:97838609-97838628 | MsG0380017556.01.T01:intron | 40.0% |
| !! | TATTCAATAGGGAGGCACTT+GGG | - | Chr3:97838507-97838526 | MsG0380017556.01.T01:CDS | 40.0% |
| !!! | ACCTCCAGTTTTAGAGTTGT+GGG | + | Chr3:97838616-97838635 | None:intergenic | 40.0% |
| AACTGGATCTATGACCGGTT+TGG | - | Chr3:97838010-97838029 | MsG0380017556.01.T01:intron | 45.0% | |
| ACGATGACTCGCGTGTATAT+TGG | - | Chr3:97837326-97837345 | MsG0380017556.01.T01:intron | 45.0% | |
| ATCTGATGCGCAGATCAAAC+TGG | + | Chr3:97837976-97837995 | None:intergenic | 45.0% | |
| ATCTTCACCGCTTCGTCTTT+AGG | - | Chr3:97837202-97837221 | MsG0380017556.01.T01:CDS | 45.0% | |
| GAGCAGGTAAAAATGGTTGG+AGG | - | Chr3:97838580-97838599 | MsG0380017556.01.T01:intron | 45.0% | |
| GCGCAGATCAAACTGGTTAT+AGG | + | Chr3:97837969-97837988 | None:intergenic | 45.0% | |
| GTTTGATCTGCGCATCAGAT+TGG | - | Chr3:97837976-97837995 | MsG0380017556.01.T01:intron | 45.0% | |
| TGCCTCCCTATTGAATAGAG+TGG | + | Chr3:97838504-97838523 | None:intergenic | 45.0% | |
| TGTTATGAGTGTGGTGAACC+TGG | - | Chr3:97838705-97838724 | MsG0380017556.01.T01:five_prime_UTR | 45.0% | |
| !! | AACTCTAAAACTGGAGGTGG+AGG | - | Chr3:97838618-97838637 | MsG0380017556.01.T01:intron | 45.0% |
| !! | ACTCTAAAACTGGAGGTGGA+GGG | - | Chr3:97838619-97838638 | MsG0380017556.01.T01:intron | 45.0% |
| !! | CACAACTCTAAAACTGGAGG+TGG | - | Chr3:97838615-97838634 | MsG0380017556.01.T01:intron | 45.0% |
| !! | CTATTCAATAGGGAGGCACT+TGG | - | Chr3:97838506-97838525 | MsG0380017556.01.T01:CDS | 45.0% |
| !! | TCCCACAACTCTAAAACTGG+AGG | - | Chr3:97838612-97838631 | MsG0380017556.01.T01:intron | 45.0% |
| !!! | CACCTCCAGTTTTAGAGTTG+TGG | + | Chr3:97838617-97838636 | None:intergenic | 45.0% |
| ACGAGCAGAATTACACTCGC+GGG | + | Chr3:97838739-97838758 | None:intergenic | 50.0% | |
| CACGAGCAGAATTACACTCG+CGG | + | Chr3:97838740-97838759 | None:intergenic | 50.0% | |
| CTCATCACTGAGAAACGGTC+CGG | - | Chr3:97837942-97837961 | MsG0380017556.01.T01:intron | 50.0% | |
| GAGTGTAATTCTGCTCGTGG+TGG | - | Chr3:97838741-97838760 | MsG0380017556.01.T01:five_prime_UTR | 50.0% | |
| GCAAAACAAGTGGATGCGGT+TGG | - | Chr3:97837081-97837100 | MsG0380017556.01.T01:CDS | 50.0% | |
| TAGCATCAAGCGCATCTCTG+CGG | + | Chr3:97837673-97837692 | None:intergenic | 50.0% | |
| TTTCGCAGGAGCCCAAGTTA+CGG | - | Chr3:97838798-97838817 | MsG0380017556.01.T01:five_prime_UTR | 50.0% | |
| ! | TCTAAAACTGGAGGTGGAGG+GGG | - | Chr3:97838621-97838640 | MsG0380017556.01.T01:intron | 50.0% |
| ! | TGTGTAGTGTGTGGGTTGCA+AGG | - | Chr3:97837612-97837631 | MsG0380017556.01.T01:intron | 50.0% |
| !! | CTCTAAAACTGGAGGTGGAG+GGG | - | Chr3:97838620-97838639 | MsG0380017556.01.T01:intron | 50.0% |
| !! | GATCTATGACCGGTTTGGTG+GGG | - | Chr3:97838015-97838034 | MsG0380017556.01.T01:intron | 50.0% |
| !! | GGATCTATGACCGGTTTGGT+GGG | - | Chr3:97838014-97838033 | MsG0380017556.01.T01:intron | 50.0% |
| !! | TGGATCTATGACCGGTTTGG+TGG | - | Chr3:97838013-97838032 | MsG0380017556.01.T01:intron | 50.0% |
| AATTCTGCTCGTGGTGGCTC+TGG | - | Chr3:97838747-97838766 | MsG0380017556.01.T01:five_prime_UTR | 55.0% | |
| ACAGCTGAACCCCACCAAAC+CGG | + | Chr3:97838027-97838046 | None:intergenic | 55.0% | |
| CGCGAGTGTAATTCTGCTCG+TGG | - | Chr3:97838738-97838757 | MsG0380017556.01.T01:five_prime_UTR | 55.0% | |
| TTCGCAGGAGCCCAAGTTAC+GGG | - | Chr3:97838799-97838818 | MsG0380017556.01.T01:five_prime_UTR | 55.0% | |
| ! | GTAGTGTGTGGGTTGCAAGG+AGG | - | Chr3:97837615-97837634 | MsG0380017556.01.T01:intron | 55.0% |
| !! | TGCGAAATCGAGGTGGACTG+CGG | + | Chr3:97838785-97838804 | None:intergenic | 55.0% |
| AAAACTGGAGGTGGAGGGGG+AGG | - | Chr3:97838624-97838643 | MsG0380017556.01.T01:intron | 60.0% | |
| CACTCGCGGGCAAAATGACC+AGG | + | Chr3:97838726-97838745 | None:intergenic | 60.0% | |
| CTTGGGCTCCTGCGAAATCG+AGG | + | Chr3:97838795-97838814 | None:intergenic | 60.0% | |
| GCAGTCCACCTCGATTTCGC+AGG | - | Chr3:97838784-97838803 | MsG0380017556.01.T01:five_prime_UTR | 60.0% | |
| ! | GTGCTACTGCAGCAGCTGCT+AGG | - | Chr3:97837162-97837181 | MsG0380017556.01.T01:CDS | 60.0% |
| !! | GTGGTGGCTCTGGAAGACGT+CGG | - | Chr3:97838757-97838776 | MsG0380017556.01.T01:five_prime_UTR | 60.0% |
| GGAGCCCAAGTTACGGGCGA+AGG | - | Chr3:97838805-97838824 | MsG0380017556.01.T01:five_prime_UTR | 65.0% | |
| GGGCTCCTGCGAAATCGAGG+TGG | + | Chr3:97838792-97838811 | None:intergenic | 65.0% | |
| GTGGTCGTGGTCGGTCTGGT+GGG | - | Chr3:97838664-97838683 | MsG0380017556.01.T01:intron | 65.0% | |
| TGGGTTGCAAGGAGGCCTCC+TGG | - | Chr3:97837623-97837642 | MsG0380017556.01.T01:intron | 65.0% | |
| TGGTCGTGGTCGGTCTGGTG+GGG | - | Chr3:97838665-97838684 | MsG0380017556.01.T01:intron | 65.0% | |
| GGTCGTGGTCGGTCTGGTGG+GGG | - | Chr3:97838666-97838685 | MsG0380017556.01.T01:intron | 70.0% | |
| GGTGGTCGTGGTCGGTCTGG+TGG | - | Chr3:97838663-97838682 | MsG0380017556.01.T01:intron | 70.0% | |
| !! | GGAGGCAGAGGTGGTGGTGG+CGG | - | Chr3:97838642-97838661 | MsG0380017556.01.T01:intron | 70.0% |
| !! | GTGGTGGCGGTGGTCGTGGT+CGG | - | Chr3:97838655-97838674 | MsG0380017556.01.T01:intron | 70.0% |
| CGTGGTCGGTCTGGTGGGGG+TGG | - | Chr3:97838669-97838688 | MsG0380017556.01.T01:intron | 75.0% | |
| GGAGGGGGAGGCAGAGGTGG+TGG | - | Chr3:97838636-97838655 | MsG0380017556.01.T01:intron | 75.0% | |
| GGAGGTGGAGGGGGAGGCAG+AGG | - | Chr3:97838630-97838649 | MsG0380017556.01.T01:intron | 75.0% | |
| GGCGGTGGTCGTGGTCGGTC+TGG | - | Chr3:97838660-97838679 | MsG0380017556.01.T01:intron | 75.0% | |
| GGTGGAGGGGGAGGCAGAGG+TGG | - | Chr3:97838633-97838652 | MsG0380017556.01.T01:intron | 75.0% | |
| ! | GGGGGAGGCAGAGGTGGTGG+TGG | - | Chr3:97838639-97838658 | MsG0380017556.01.T01:intron | 75.0% |
| !! | GGCAGAGGTGGTGGTGGCGG+TGG | - | Chr3:97838645-97838664 | MsG0380017556.01.T01:intron | 75.0% |
| !! | GGTGGTGGTGGCGGTGGTCG+TGG | - | Chr3:97838651-97838670 | MsG0380017556.01.T01:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 97837078 | 97838830 | 97837078 | ID=MsG0380017556.01;Name=MsG0380017556.01 |
| Chr3 | mRNA | 97837078 | 97838830 | 97837078 | ID=MsG0380017556.01.T01;Parent=MsG0380017556.01;Name=MsG0380017556.01.T01;_AED=0.47;_eAED=0.48;_QI=154|1|0.75|1|0.66|0.75|4|0|140 |
| Chr3 | exon | 97837078 | 97837322 | 97837078 | ID=MsG0380017556.01.T01:exon:21387;Parent=MsG0380017556.01.T01 |
| Chr3 | exon | 97838201 | 97838289 | 97838201 | ID=MsG0380017556.01.T01:exon:21386;Parent=MsG0380017556.01.T01 |
| Chr3 | exon | 97838491 | 97838587 | 97838491 | ID=MsG0380017556.01.T01:exon:21385;Parent=MsG0380017556.01.T01 |
| Chr3 | exon | 97838685 | 97838830 | 97838685 | ID=MsG0380017556.01.T01:exon:21384;Parent=MsG0380017556.01.T01 |
| Chr3 | five_prime_UTR | 97838685 | 97838830 | 97838685 | ID=MsG0380017556.01.T01:five_prime_utr;Parent=MsG0380017556.01.T01 |
| Chr3 | five_prime_UTR | 97838580 | 97838587 | 97838580 | ID=MsG0380017556.01.T01:five_prime_utr;Parent=MsG0380017556.01.T01 |
| Chr3 | CDS | 97838491 | 97838579 | 97838491 | ID=MsG0380017556.01.T01:cds;Parent=MsG0380017556.01.T01 |
| Chr3 | CDS | 97838201 | 97838289 | 97838201 | ID=MsG0380017556.01.T01:cds;Parent=MsG0380017556.01.T01 |
| Chr3 | CDS | 97837078 | 97837322 | 97837078 | ID=MsG0380017556.01.T01:cds;Parent=MsG0380017556.01.T01 |
| Gene Sequence |
| Protein sequence |
