AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033754.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033754.01.T01 MTR_0032s0040 88.136 177 17 1 3 175 46 222 1.02e-114 330
MsG0680033754.01.T01 MTR_7g029655 64.571 175 60 1 1 175 45 217 1.20e-79 241
MsG0680033754.01.T01 MTR_8g041620 48.503 167 79 2 15 176 60 224 2.78e-54 176
MsG0680033754.01.T01 MTR_8g041600 47.305 167 81 2 15 176 60 224 4.27e-54 174
MsG0680033754.01.T01 MTR_8g041600 47.305 167 81 2 15 176 60 224 3.14e-53 174
MsG0680033754.01.T01 MTR_8g008930 50.610 164 74 3 18 176 55 216 1.83e-51 169
MsG0680033754.01.T01 MTR_8g009090 49.693 163 76 2 18 176 55 215 8.73e-51 167
MsG0680033754.01.T01 MTR_8g009080 52.229 157 70 2 23 176 94 248 2.98e-48 159
MsG0680033754.01.T01 MTR_8g009080 52.229 157 70 2 23 176 94 248 4.70e-48 159
MsG0680033754.01.T01 MTR_8g009080 52.229 157 70 2 23 176 94 248 1.32e-47 159
MsG0680033754.01.T01 MTR_8g028435 45.399 163 83 2 18 176 55 215 3.33e-47 157
MsG0680033754.01.T01 MTR_8g009160 46.386 166 83 2 15 176 52 215 3.59e-47 157
MsG0680033754.01.T01 MTR_7g056393 42.331 163 89 2 17 176 61 221 4.39e-47 157
MsG0680033754.01.T01 MTR_4g119410 42.236 161 88 2 19 176 63 221 7.24e-47 157
MsG0680033754.01.T01 MTR_8g009110 49.057 159 74 3 23 176 60 216 1.52e-46 156
MsG0680033754.01.T01 MTR_8g009150 46.061 165 82 3 17 176 54 216 2.76e-46 155
MsG0680033754.01.T01 MTR_2g069210 47.531 162 80 2 17 175 58 217 5.20e-46 154
MsG0680033754.01.T01 MTR_8g009170 46.875 160 76 4 23 176 60 216 2.23e-45 151
MsG0680033754.01.T01 MTR_1g093120 45.963 161 82 2 18 175 62 220 7.19e-45 152
MsG0680033754.01.T01 MTR_8g009170 46.875 160 76 4 23 176 60 216 9.68e-45 151
MsG0680033754.01.T01 MTR_2g069190 44.068 177 90 3 2 175 51 221 1.88e-44 150
MsG0680033754.01.T01 MTR_7g056347 42.073 164 90 2 16 176 60 221 3.75e-44 150
MsG0680033754.01.T01 MTR_2g069300 46.707 167 84 2 13 176 44 208 4.99e-44 149
MsG0680033754.01.T01 MTR_7g078010 40.491 163 92 2 17 176 61 221 8.06e-44 147
MsG0680033754.01.T01 MTR_2g069090 43.503 177 91 3 2 175 51 221 9.07e-44 149
MsG0680033754.01.T01 MTR_8g063070 41.104 163 91 2 17 176 61 221 3.65e-43 147
MsG0680033754.01.T01 MTR_7g078010 40.491 163 92 2 17 176 61 221 3.73e-43 147
MsG0680033754.01.T01 MTR_1g093110 43.478 161 86 2 18 175 65 223 9.01e-43 146
MsG0680033754.01.T01 MTR_1g070185 44.048 168 91 3 9 175 55 220 1.12e-42 146
MsG0680033754.01.T01 MTR_8g062600 41.667 168 93 2 12 176 56 221 2.72e-42 145
MsG0680033754.01.T01 MTR_1g093140 43.210 162 87 2 17 175 67 226 6.96e-42 144
MsG0680033754.01.T01 MTR_4g024660 39.286 168 97 2 12 176 56 221 2.20e-41 142
MsG0680033754.01.T01 MTR_2g069020 43.787 169 90 2 5 170 49 215 2.98e-41 142
MsG0680033754.01.T01 MTR_1g043760 45.509 167 84 3 13 176 45 207 3.54e-41 142
MsG0680033754.01.T01 MTR_2g069020 43.787 169 90 2 5 170 49 215 5.08e-41 142
MsG0680033754.01.T01 MTR_8g006930 38.650 163 95 2 17 176 61 221 5.67e-41 142
MsG0680033754.01.T01 MTR_2g069010 43.949 157 83 2 17 170 63 217 2.86e-40 140
MsG0680033754.01.T01 MTR_1g043770 43.827 162 85 2 18 176 48 206 3.28e-40 138
MsG0680033754.01.T01 MTR_1g043770 43.827 162 85 2 18 176 48 206 6.04e-40 139
MsG0680033754.01.T01 MTR_1g043810 42.697 178 91 4 3 176 38 208 4.82e-39 135
MsG0680033754.01.T01 MTR_4g117880 43.396 159 83 3 23 176 60 216 5.58e-39 136
MsG0680033754.01.T01 MTR_1g043810 42.697 178 91 4 3 176 38 208 8.29e-39 135
MsG0680033754.01.T01 MTR_2g069060 41.104 163 91 2 17 176 21 181 1.39e-38 132
MsG0680033754.01.T01 MTR_7g056370 41.975 162 86 4 14 170 35 193 3.13e-38 130
MsG0680033754.01.T01 MTR_2g069060 41.104 163 91 2 17 176 43 203 7.86e-38 133
MsG0680033754.01.T01 MTR_1g043775 43.671 158 82 3 23 176 54 208 1.76e-37 131
MsG0680033754.01.T01 MTR_1g043775 43.671 158 82 3 23 176 54 208 3.45e-37 131
MsG0680033754.01.T01 MTR_2g068950 43.312 157 84 2 17 170 57 211 3.49e-37 132
MsG0680033754.01.T01 MTR_2g068960 43.787 169 87 4 5 170 48 211 1.53e-36 130
MsG0680033754.01.T01 MTR_8g469400 36.970 165 92 3 12 176 56 208 9.48e-35 125
MsG0680033754.01.T01 MTR_8g009120 40.606 165 79 4 17 176 54 204 1.44e-33 122
MsG0680033754.01.T01 MTR_7g105070 34.320 169 103 3 2 168 42 204 7.86e-32 117
MsG0680033754.01.T01 MTR_1g032140 40.667 150 84 2 2 151 48 192 9.25e-32 117
MsG0680033754.01.T01 MTR_1g032220 39.333 150 86 2 2 151 55 199 7.88e-31 115
MsG0680033754.01.T01 MTR_1g032250 39.333 150 86 2 2 151 55 199 1.06e-29 112
MsG0680033754.01.T01 MTR_4g099380 46.018 113 57 2 23 135 174 282 1.15e-27 105
MsG0680033754.01.T01 MTR_7g056353 40.833 120 68 1 57 176 79 195 1.48e-26 105
MsG0680033754.01.T01 MTR_2g069070 41.463 123 65 3 17 135 43 162 3.07e-25 96.7
MsG0680033754.01.T01 MTR_1g044105 39.855 138 72 4 3 134 39 171 1.01e-23 92.4
MsG0680033754.01.T01 MTR_3g092890 35.526 152 85 5 22 167 37 181 1.64e-21 89.7
MsG0680033754.01.T01 MTR_1g070120 33.987 153 94 4 22 169 37 187 2.27e-20 86.7
MsG0680033754.01.T01 MTR_6g015950 31.034 174 112 5 1 169 16 186 8.01e-20 85.1
MsG0680033754.01.T01 MTR_3g091360 32.192 146 93 3 22 163 51 194 6.66e-19 82.8
MsG0680033754.01.T01 MTR_8g024120 32.075 159 96 5 18 169 37 190 3.53e-18 80.5
MsG0680033754.01.T01 MTR_3g091350 30.233 172 108 5 12 176 51 217 5.97e-18 80.1
MsG0680033754.01.T01 MTR_7g068650 34.375 160 86 4 20 167 51 203 4.50e-17 77.8
MsG0680033754.01.T01 MTR_4g015790 33.939 165 90 4 15 167 54 211 1.11e-16 76.6
MsG0680033754.01.T01 MTR_1g070085 30.921 152 98 4 23 169 37 186 8.75e-16 73.9
MsG0680033754.01.T01 MTR_1g070085 30.921 152 98 4 23 169 37 186 8.75e-16 73.9
MsG0680033754.01.T01 MTR_1g070135 29.375 160 105 5 22 176 37 193 1.23e-15 73.2
MsG0680033754.01.T01 MTR_7g016090 30.189 159 93 5 18 167 36 185 1.43e-15 73.2
MsG0680033754.01.T01 MTR_7g016090 30.189 159 93 5 18 167 34 183 1.46e-15 73.2
MsG0680033754.01.T01 MTR_1g070135 29.375 160 105 5 22 176 37 193 1.66e-15 73.2
MsG0680033754.01.T01 MTR_1g062110 28.571 175 119 3 1 171 44 216 1.81e-15 72.8
MsG0680033754.01.T01 MTR_1g062110 28.571 175 119 3 1 171 44 216 2.78e-15 72.8
MsG0680033754.01.T01 MTR_2g068840 31.098 164 87 4 15 165 47 197 3.04e-15 72.4
MsG0680033754.01.T01 MTR_1g070080 31.169 154 97 4 22 169 37 187 4.42e-15 72.0
MsG0680033754.01.T01 MTR_7g081710 29.480 173 109 5 1 167 31 196 9.98e-15 70.9
MsG0680033754.01.T01 MTR_8g009180 34.653 101 50 1 92 176 45 145 1.63e-14 70.1
MsG0680033754.01.T01 MTR_3g058610 31.169 154 92 4 23 167 39 187 1.80e-14 70.5
MsG0680033754.01.T01 MTR_8g075890 30.263 152 96 3 23 167 39 187 1.97e-13 67.4
MsG0680033754.01.T01 MTR_3g045230 32.540 126 81 2 18 143 51 172 3.45e-13 66.6
MsG0680033754.01.T01 MTR_7g016080 27.500 160 110 3 13 169 31 187 2.04e-12 64.3
MsG0680033754.01.T01 MTR_3g043900 33.333 126 79 3 18 143 51 171 2.80e-12 63.9
MsG0680033754.01.T01 MTR_3g070860 28.736 174 97 5 11 168 38 200 4.28e-12 63.5
MsG0680033754.01.T01 MTR_1g043840 38.835 103 55 3 6 105 231 328 4.72e-12 63.5
MsG0680033754.01.T01 MTR_5g032880 30.128 156 96 4 22 167 375 527 7.52e-12 63.2
MsG0680033754.01.T01 MTR_5g032880 29.268 164 100 5 11 167 27 181 1.76e-11 62.0
MsG0680033754.01.T01 MTR_7g102720 31.200 125 82 2 22 146 36 156 7.77e-12 62.8
MsG0680033754.01.T01 MTR_3g072820 30.409 171 94 6 11 168 30 188 9.31e-12 62.4
MsG0680033754.01.T01 MTR_5g065010 28.289 152 102 3 23 170 39 187 1.09e-11 62.4
MsG0680033754.01.T01 MTR_5g022020 30.519 154 93 4 23 167 39 187 1.20e-11 62.4
MsG0680033754.01.T01 MTR_7g102820 26.061 165 112 4 2 162 50 208 1.81e-11 62.0
MsG0680033754.01.T01 MTR_5g082750 28.070 171 104 4 11 169 37 200 4.00e-11 60.8
MsG0680033754.01.T01 MTR_7g062570 27.922 154 100 3 23 170 55 203 5.60e-11 60.5
MsG0680033754.01.T01 MTR_2g068850 29.834 181 82 7 14 162 46 213 7.05e-11 59.3
MsG0680033754.01.T01 MTR_8g075830 27.922 154 97 4 23 167 39 187 7.65e-11 60.1
MsG0680033754.01.T01 MTR_5g085330 29.221 154 90 6 22 168 4 145 9.13e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033754.01.T01 AT1G06650 47.222 180 86 4 2 176 44 219 2.16e-54 175
MsG0680033754.01.T01 AT1G06650 47.222 180 86 4 2 176 44 219 8.63e-54 175
MsG0680033754.01.T01 AT1G04350 46.893 177 88 3 1 176 39 210 1.05e-53 174
MsG0680033754.01.T01 AT1G06640 47.458 177 84 4 5 176 47 219 4.78e-53 171
MsG0680033754.01.T01 AT1G06640 47.458 177 84 4 5 176 47 219 7.83e-53 171
MsG0680033754.01.T01 AT1G06640 47.458 177 84 4 5 176 47 219 3.74e-52 171
MsG0680033754.01.T01 AT1G06620 46.369 179 85 4 2 176 45 216 4.16e-52 168
MsG0680033754.01.T01 AT1G06620 46.369 179 85 4 2 176 45 216 4.10e-51 168
MsG0680033754.01.T01 AT1G04380 43.182 176 92 2 1 176 29 196 1.56e-48 158
MsG0680033754.01.T01 AT2G30840 46.988 166 81 2 16 176 50 213 3.01e-48 159
MsG0680033754.01.T01 AT2G25450 44.944 178 88 3 2 176 39 209 5.05e-48 159
MsG0680033754.01.T01 AT2G30840 46.988 166 81 2 16 176 50 213 5.78e-48 159
MsG0680033754.01.T01 AT2G30840 46.988 166 81 2 16 176 50 213 5.96e-48 159
MsG0680033754.01.T01 AT1G04380 43.182 176 92 2 1 176 29 196 1.03e-47 158
MsG0680033754.01.T01 AT5G43450 42.373 177 97 3 1 176 41 213 4.08e-47 155
MsG0680033754.01.T01 AT5G43440 44.828 174 89 4 6 176 47 216 1.08e-46 154
MsG0680033754.01.T01 AT5G43450 42.373 177 97 3 1 176 41 213 1.69e-46 155
MsG0680033754.01.T01 AT5G59540 44.571 175 89 4 6 176 47 217 2.04e-46 153
MsG0680033754.01.T01 AT5G43440 44.828 174 89 4 6 176 47 216 5.80e-46 154
MsG0680033754.01.T01 AT5G59540 44.571 175 89 4 6 176 47 217 1.13e-45 154
MsG0680033754.01.T01 AT2G30830 44.785 163 84 2 18 176 49 209 2.96e-45 152
MsG0680033754.01.T01 AT1G03410 45.604 182 83 6 2 175 38 211 9.60e-45 151
MsG0680033754.01.T01 AT3G61400 42.703 185 89 5 2 176 43 220 1.13e-44 149
MsG0680033754.01.T01 AT1G03410 45.604 182 83 6 2 175 75 248 1.95e-44 151
MsG0680033754.01.T01 AT3G61400 42.703 185 89 5 2 176 43 220 4.51e-44 150
MsG0680033754.01.T01 AT1G06645 44.886 176 87 4 5 176 60 229 2.95e-43 148
MsG0680033754.01.T01 AT5G59530 46.012 163 82 4 19 176 54 215 1.15e-42 146
MsG0680033754.01.T01 AT1G03400 46.452 155 76 2 20 174 53 200 3.41e-42 144
MsG0680033754.01.T01 AT1G03400 46.154 156 77 2 20 175 53 201 1.01e-41 144
MsG0680033754.01.T01 AT5G24530 32.484 157 99 3 22 175 37 189 4.67e-22 91.3
MsG0680033754.01.T01 AT4G10500 33.537 164 103 3 11 170 32 193 6.12e-22 90.9
MsG0680033754.01.T01 AT4G10490 30.675 163 107 3 11 169 30 190 1.78e-21 89.7
MsG0680033754.01.T01 AT1G55290 33.099 142 92 2 22 163 61 199 3.44e-17 78.2
MsG0680033754.01.T01 AT3G13610 31.206 141 94 2 23 163 62 199 5.22e-17 77.4
MsG0680033754.01.T01 AT2G38240 34.667 150 88 5 23 167 48 192 5.22e-16 74.7
MsG0680033754.01.T01 AT3G11180 28.571 175 110 3 2 168 74 241 2.70e-14 70.1
MsG0680033754.01.T01 AT3G11180 28.571 175 110 3 2 168 74 241 2.82e-14 70.1
MsG0680033754.01.T01 AT3G55970 31.646 158 89 5 23 168 52 202 4.01e-14 68.9
MsG0680033754.01.T01 AT3G55970 31.447 159 90 5 23 169 52 203 6.91e-14 68.9
MsG0680033754.01.T01 AT2G36690 30.345 145 95 4 20 160 58 200 1.15e-13 68.2
MsG0680033754.01.T01 AT2G36690 30.345 145 95 4 20 160 58 200 1.15e-13 68.2
MsG0680033754.01.T01 AT3G12900 31.579 152 100 3 26 174 59 209 2.20e-13 67.4
MsG0680033754.01.T01 AT5G63590 31.646 158 98 5 19 170 10 163 7.45e-13 65.5
MsG0680033754.01.T01 AT2G44800 28.070 171 98 5 12 168 41 200 1.74e-12 64.7
MsG0680033754.01.T01 AT5G05600 29.885 174 103 6 7 168 46 212 6.01e-12 62.8
MsG0680033754.01.T01 AT5G05600 28.736 174 105 5 7 168 46 212 1.09e-11 62.4
MsG0680033754.01.T01 AT3G19000 28.235 170 93 5 23 170 32 194 1.24e-11 62.4
MsG0680033754.01.T01 AT3G19000 28.235 170 93 5 23 170 32 194 1.24e-11 62.0
MsG0680033754.01.T01 AT5G08640 31.707 164 82 6 23 170 43 192 1.38e-11 62.0
MsG0680033754.01.T01 AT5G08640 31.707 164 82 6 23 170 43 192 1.38e-11 62.0
MsG0680033754.01.T01 AT5G63580 29.412 153 91 5 23 167 19 162 1.61e-11 61.2
MsG0680033754.01.T01 AT5G63580 29.412 153 91 5 23 167 19 162 1.67e-11 61.2
MsG0680033754.01.T01 AT3G51240 29.605 152 97 3 23 167 38 186 1.85e-11 62.0
MsG0680033754.01.T01 AT5G63600 28.846 156 90 4 16 163 26 168 1.90e-11 61.6
MsG0680033754.01.T01 AT5G63600 28.846 156 90 4 16 163 26 168 1.98e-11 61.6

Find 52 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGTCAGTTCGCCGGCTATT+GGG 0.230622 6:-72822676 None:intergenic
GGCGGTGTTGGCGATTTCTT+CGG 0.306735 6:-72822654 None:intergenic
GAGGTCAGTTCGCCGGCTAT+TGG 0.312297 6:-72822677 None:intergenic
GCGGTGTTGGCGATTTCTTC+GGG 0.323560 6:-72822653 None:intergenic
ATCAGTCAAAGTTCGCTAAT+TGG 0.328601 6:+72822960 MsG0680033754.01.T01:CDS
CTCTAAGCAAGTTCAAGAAT+TGG 0.332387 6:+72825584 MsG0680033754.01.T01:CDS
CGGCAGGCAGCTGGAACAGC+TGG 0.357871 6:+72822773 MsG0680033754.01.T01:CDS
TCTTGTGGATCAAGAGGTTC+AGG 0.373403 6:-72823010 None:intergenic
TGGAATACCGGTGAAACTAT+TGG 0.408343 6:+72822817 MsG0680033754.01.T01:CDS
TCTGTAATCCGGCAGGCAGC+TGG 0.443895 6:+72822764 MsG0680033754.01.T01:CDS
TCTAAGCAAGTTCAAGAATT+GGG 0.445494 6:+72825585 MsG0680033754.01.T01:CDS
ATATCATTAAGGTCTATTAC+AGG 0.449369 6:-72822716 None:intergenic
GCCGGCTATTGGGGCGGTGT+TGG 0.466407 6:-72822666 None:intergenic
GAAGGCATGGATTGTACAAA+AGG 0.470287 6:+72825663 MsG0680033754.01.T01:CDS
CAGCTGTTCCAGCTGCCTGC+CGG 0.471730 6:-72822772 None:intergenic
GCCAACACCGCCCCAATAGC+CGG 0.477282 6:+72822665 MsG0680033754.01.T01:CDS
TCATCTCTTGTGGAAGCTCA+TGG 0.481065 6:-72822868 None:intergenic
GATACACTGTCTTGTGTGAT+GGG 0.491151 6:+72822986 MsG0680033754.01.T01:CDS
CTCAAGACTGACCATCTTGA+AGG 0.492322 6:+72825645 MsG0680033754.01.T01:CDS
TGACTGATACAGATCAAAGT+TGG 0.500596 6:-72822945 None:intergenic
CAACTATTATCAGAAGCACT+TGG 0.508955 6:+72825621 MsG0680033754.01.T01:CDS
TACTCAGCCTTCATCTCTTG+TGG 0.512847 6:-72822878 None:intergenic
CTGATGTTGTGTCTGTAATC+CGG 0.515367 6:+72822753 MsG0680033754.01.T01:CDS
TACAATCCATGCCTTCAAGA+TGG 0.516316 6:-72825656 None:intergenic
GGATACACTGTCTTGTGTGA+TGG 0.522816 6:+72822985 MsG0680033754.01.T01:CDS
GACTGACCATCTTGAAGGCA+TGG 0.524640 6:+72825650 MsG0680033754.01.T01:CDS
GCTGAGTATTTCACTAGGGA+TGG 0.527720 6:+72822893 MsG0680033754.01.T01:CDS
CAGACAGAAGGCAGTTCTTG+TGG 0.530797 6:-72823025 None:intergenic
ATCTCCTCCAATAGTTTCAC+CGG 0.531195 6:-72822824 None:intergenic
GAAACTATTGGAGGAGATGT+TGG 0.531500 6:+72822829 MsG0680033754.01.T01:CDS
GGTCAGTTCGCCGGCTATTG+GGG 0.538546 6:-72822675 None:intergenic
TGAGCTTCCACAAGAGATGA+AGG 0.551464 6:+72822871 MsG0680033754.01.T01:CDS
GGCAGTTCTTGTGGATCAAG+AGG 0.554837 6:-72823016 None:intergenic
CTGTGTAGAGGTCAGTTCGC+CGG 0.555179 6:-72822684 None:intergenic
GGTGGTGAATCATGGAATAC+CGG 0.556680 6:+72822805 MsG0680033754.01.T01:CDS
GTATTCCATGATTCACCACC+TGG 0.575540 6:-72822802 None:intergenic
CTGAGTATTTCACTAGGGAT+GGG 0.584717 6:+72822894 MsG0680033754.01.T01:CDS
TGAAGGCTGAGTATTTCACT+AGG 0.590101 6:+72822888 MsG0680033754.01.T01:CDS
GGCAGGCAGCTGGAACAGCT+GGG 0.594194 6:+72822774 MsG0680033754.01.T01:CDS
GTCAAAGTTCGCTAATTGGA+GGG 0.594543 6:+72822964 MsG0680033754.01.T01:CDS
AGTCAAAGTTCGCTAATTGG+AGG 0.611279 6:+72822963 MsG0680033754.01.T01:CDS
TGTTGTGTCTGTAATCCGGC+AGG 0.620005 6:+72822757 MsG0680033754.01.T01:CDS
CAGTTCGCCGGCTATTGGGG+CGG 0.624653 6:-72822672 None:intergenic
AAGAACTGCCTTCTGTCTGT+AGG 0.626110 6:+72823029 MsG0680033754.01.T01:CDS
ATTGGAGGAGATGTTGGCGG+TGG 0.626660 6:+72822835 MsG0680033754.01.T01:CDS
TCAACATACCTACAGACAGA+AGG 0.632826 6:-72823037 None:intergenic
TGGGCATAAAATGAAGAGAG+TGG 0.634065 6:+72822913 MsG0680033754.01.T01:CDS
GTGTTGGCGATTTCTTCGGG+TGG 0.640486 6:-72822650 None:intergenic
GAAGGCTGAGTATTTCACTA+GGG 0.651933 6:+72822889 MsG0680033754.01.T01:CDS
AGGAATGTTGAACTGTGTAG+AGG 0.655873 6:-72822696 None:intergenic
AATACCGGTGAAACTATTGG+AGG 0.657026 6:+72822820 MsG0680033754.01.T01:CDS
ACTATTGGAGGAGATGTTGG+CGG 0.683823 6:+72822832 MsG0680033754.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAACAAAAACAAT+AGG + Chr6:72823201-72823220 MsG0680033754.01.T01:intron 10.0%
!! AATAAAAAACAAAAACAATA+GGG + Chr6:72823202-72823221 MsG0680033754.01.T01:intron 10.0%
!! AATCGAAAAAATATATTAAT+AGG - Chr6:72825458-72825477 None:intergenic 10.0%
!! AGAATATATAATTTATCTTA+AGG - Chr6:72824248-72824267 None:intergenic 10.0%
!! TATATTCTTTCAAAAAAATT+AGG + Chr6:72824260-72824279 MsG0680033754.01.T01:intron 10.0%
!! TTATAACATTTCATTAATTA+AGG + Chr6:72823272-72823291 MsG0680033754.01.T01:intron 10.0%
!!! AAAACCAAATTTTTTATATT+TGG + Chr6:72825022-72825041 MsG0680033754.01.T01:intron 10.0%
!!! AAACAAAAAAATATTTTTAC+AGG - Chr6:72824797-72824816 None:intergenic 10.0%
!!! AAATATAAAAAATTTGGTTT+TGG - Chr6:72825023-72825042 None:intergenic 10.0%
!!! AACAAAAAAATATTTTTACA+GGG - Chr6:72824796-72824815 None:intergenic 10.0%
!!! AATTATTACATTTTATTTGA+AGG - Chr6:72824141-72824160 None:intergenic 10.0%
!!! AATTTGCATTAATTTTTTTT+AGG + Chr6:72823173-72823192 MsG0680033754.01.T01:intron 10.0%
!!! ATTTGCATTAATTTTTTTTA+GGG + Chr6:72823174-72823193 MsG0680033754.01.T01:intron 10.0%
!!! TTTTTGAACAAAAAAAAATT+AGG + Chr6:72824363-72824382 MsG0680033754.01.T01:intron 10.0%
!! AAATCATTTCATATTGAAAT+TGG + Chr6:72824878-72824897 MsG0680033754.01.T01:intron 15.0%
!! AATTCTTAAAATTGAAATGA+TGG + Chr6:72824157-72824176 MsG0680033754.01.T01:intron 15.0%
!! ACAATATTTAAACATATAGT+TGG - Chr6:72823839-72823858 None:intergenic 15.0%
!! TGTTATGCTAAAAAAAAAAT+TGG + Chr6:72823858-72823877 MsG0680033754.01.T01:intron 15.0%
!!! AAAATTGTAAAACTCTTTTT+AGG - Chr6:72823434-72823453 None:intergenic 15.0%
!!! AAATATAGAATATTTGGTTT+TGG + Chr6:72824827-72824846 MsG0680033754.01.T01:intron 15.0%
!!! AACACTTAACTAAATATTTT+AGG - Chr6:72825503-72825522 None:intergenic 15.0%
!!! AACCAAAAAAATATTTTTAC+AGG + Chr6:72825054-72825073 MsG0680033754.01.T01:intron 15.0%
!!! AATGATTTTATTTTTGCAAA+TGG + Chr6:72825318-72825337 MsG0680033754.01.T01:intron 15.0%
!!! ACCAAAAAAATATTTTTACA+GGG + Chr6:72825055-72825074 MsG0680033754.01.T01:intron 15.0%
!!! ATGATTTTATTTTTGCAAAT+GGG + Chr6:72825319-72825338 MsG0680033754.01.T01:intron 15.0%
!!! GTGATTAAATTTAATTTGTA+GGG + Chr6:72825545-72825564 MsG0680033754.01.T01:intron 15.0%
!!! TAAAAAGAGTTTTACAATTT+TGG + Chr6:72823433-72823452 MsG0680033754.01.T01:intron 15.0%
!!! TGTGATTAAATTTAATTTGT+AGG + Chr6:72825544-72825563 MsG0680033754.01.T01:intron 15.0%
!!! TTGTTTCTCTAAAAAATATT+TGG - Chr6:72823250-72823269 None:intergenic 15.0%
!! AAATTAGGTAAGTTATATTG+AGG + Chr6:72824275-72824294 MsG0680033754.01.T01:intron 20.0%
!! AGGACTAAAATGATATTATA+GGG - Chr6:72824905-72824924 None:intergenic 20.0%
!! GAAGTAAAATCATAGAAAAA+AGG - Chr6:72825130-72825149 None:intergenic 20.0%
!! GATGAATAGAAAAAAATAGT+TGG - Chr6:72824711-72824730 None:intergenic 20.0%
!! GGACTAAATAAAAAATAGTT+GGG + Chr6:72823223-72823242 MsG0680033754.01.T01:intron 20.0%
!! TAAGTTATATTGTGTATGAT+TGG + Chr6:72824283-72824302 MsG0680033754.01.T01:intron 20.0%
!! TACTATTTGAATGTTTAAGT+GGG + Chr6:72825215-72825234 MsG0680033754.01.T01:intron 20.0%
!! TGCTAAAAAAAAAATTGGTT+CGG + Chr6:72823863-72823882 MsG0680033754.01.T01:intron 20.0%
!!! ACCAAATTTTTTATATTTGG+AGG + Chr6:72825025-72825044 MsG0680033754.01.T01:intron 20.0%
!!! ACTTAACTAAATATTTTAGG+TGG - Chr6:72825500-72825519 None:intergenic 20.0%
!!! ATTTTTTCTAGGCTTAAATA+TGG + Chr6:72824732-72824751 MsG0680033754.01.T01:intron 20.0%
!!! CAATATGAAATGATTTTACA+AGG - Chr6:72824874-72824893 None:intergenic 20.0%
!!! CCAAATTTTTTATATTTGGA+GGG + Chr6:72825026-72825045 MsG0680033754.01.T01:intron 20.0%
!!! CTTAACTAAATATTTTAGGT+GGG - Chr6:72825499-72825518 None:intergenic 20.0%
!!! GTTGTAAAATTGATTCATAT+TGG - Chr6:72824978-72824997 None:intergenic 20.0%
!!! TCATATGTTAAACAATTTTG+CGG - Chr6:72824318-72824337 None:intergenic 20.0%
!!! TCCCTGTAAAAATATTTTTT+TGG - Chr6:72824811-72824792 None:intergenic 20.0%
!!! TCTATTCATCTATTTTTTCT+AGG + Chr6:72824721-72824740 MsG0680033754.01.T01:intron 20.0%
!!! TTAACTAAATATTTTAGGTG+GGG - Chr6:72825498-72825517 None:intergenic 20.0%
!!! TTTCTATGATTTTACTTCAA+AGG + Chr6:72825132-72825151 MsG0680033754.01.T01:intron 20.0%
! AATAGTAGGAACAAATTTAG+AGG - Chr6:72825202-72825221 None:intergenic 25.0%
! AATTGCTCATTAGTTAACTA+AGG - Chr6:72823362-72823381 None:intergenic 25.0%
! ACCAAATATTCTATATTTGC+AGG - Chr6:72824825-72824844 None:intergenic 25.0%
! AGGATTAAAACAAAATACCA+AGG - Chr6:72824854-72824873 None:intergenic 25.0%
! ATATCATTAAGGTCTATTAC+AGG - Chr6:72822719-72822738 None:intergenic 25.0%
! ATTTGTATTAGAGATGAGTA+TGG - Chr6:72823665-72823684 None:intergenic 25.0%
! CAAAATGTTAGATATTTGCA+GGG + Chr6:72825086-72825105 MsG0680033754.01.T01:intron 25.0%
! CACAAAGTTATATGAAAAAG+AGG - Chr6:72825421-72825440 None:intergenic 25.0%
! CACTTAAACATTCAAATAGT+AGG - Chr6:72825216-72825235 None:intergenic 25.0%
! CCAAATATTCTATATTTGCA+GGG - Chr6:72824824-72824843 None:intergenic 25.0%
! CCCTCCAAATATAAAAAATT+TGG - Chr6:72825029-72825048 None:intergenic 25.0%
! CTAATATGAACATCACAAAT+GGG + Chr6:72823605-72823624 MsG0680033754.01.T01:intron 25.0%
! CTACTATTTGAATGTTTAAG+TGG + Chr6:72825214-72825233 MsG0680033754.01.T01:intron 25.0%
! CTAGGAATTATTTACATAAC+CGG + Chr6:72824622-72824641 MsG0680033754.01.T01:intron 25.0%
! GAATAGAAAAAAATAGTTGG+TGG - Chr6:72824708-72824727 None:intergenic 25.0%
! GAGGACTAAAATGATATTAT+AGG - Chr6:72824906-72824925 None:intergenic 25.0%
! GGGACTAAATAAAAAATAGT+TGG + Chr6:72823222-72823241 MsG0680033754.01.T01:intron 25.0%
! TAATATAAAAGCTCTTATCG+TGG + Chr6:72825368-72825387 MsG0680033754.01.T01:intron 25.0%
! TCTAATATGAACATCACAAA+TGG + Chr6:72823604-72823623 MsG0680033754.01.T01:intron 25.0%
! TGTGTTCAATATATACAATC+TGG + Chr6:72823295-72823314 MsG0680033754.01.T01:intron 25.0%
! TTCATATAACTTTGTGTGAT+CGG + Chr6:72825425-72825444 MsG0680033754.01.T01:intron 25.0%
!! AGAGCTTTTATATTATCAAC+TGG - Chr6:72825363-72825382 None:intergenic 25.0%
!! CTTGAAAATGTTGTTTATGT+TGG + Chr6:72823090-72823109 MsG0680033754.01.T01:intron 25.0%
!! GCATATGACTATATCTTTTA+AGG - Chr6:72824193-72824212 None:intergenic 25.0%
!!! ATGATTGGTGTGTTTTATTT+TGG + Chr6:72823065-72823084 MsG0680033754.01.T01:intron 25.0%
ACGACTAAAACAAAATACCA+AGG + Chr6:72824996-72825015 MsG0680033754.01.T01:intron 30.0%
ACTAGTTGAATTGAAAGACT+CGG + Chr6:72823945-72823964 MsG0680033754.01.T01:intron 30.0%
AGAGATAAGAAAGAGCAAAA+GGG + Chr6:72825244-72825263 MsG0680033754.01.T01:intron 30.0%
ATGTACATGACCTTAATTAG+AGG - Chr6:72823553-72823572 None:intergenic 30.0%
CAAAACGCTAGATATTTACA+GGG - Chr6:72824765-72824784 None:intergenic 30.0%
CCAAAATGTTAGATATTTGC+AGG + Chr6:72825085-72825104 MsG0680033754.01.T01:intron 30.0%
CCCTGCAAATATAGAATATT+TGG + Chr6:72824821-72824840 MsG0680033754.01.T01:intron 30.0%
CTGAAAACTAACTGACAATA+AGG + Chr6:72823333-72823352 MsG0680033754.01.T01:intron 30.0%
TAGAGATAAGAAAGAGCAAA+AGG + Chr6:72825243-72825262 MsG0680033754.01.T01:intron 30.0%
TCATATAACTTTGTGTGATC+GGG + Chr6:72825426-72825445 MsG0680033754.01.T01:intron 30.0%
TCTAAGCAAGTTCAAGAATT+GGG + Chr6:72825585-72825604 MsG0680033754.01.T01:CDS 30.0%
TCTAGGCTTAAATATGGAAA+TGG + Chr6:72824738-72824757 MsG0680033754.01.T01:intron 30.0%
TTTCCTCTCATTACTTCATT+AGG - Chr6:72824650-72824669 None:intergenic 30.0%
! ATATTATCAACTGGCTTCTT+TGG - Chr6:72825354-72825373 None:intergenic 30.0%
! ATGATTTTACTTCAAAGGTG+TGG + Chr6:72825137-72825156 MsG0680033754.01.T01:intron 30.0%
! CCACCATCTTTAAAAAAGTT+GGG + Chr6:72824575-72824594 MsG0680033754.01.T01:intron 30.0%
! CCTGCAAATATCTAACATTT+TGG - Chr6:72825088-72825107 None:intergenic 30.0%
! GTTAAACAATTTTGCGGTAT+CGG - Chr6:72824312-72824331 None:intergenic 30.0%
! GTTCATATTAGAGAAGCTTT+TGG - Chr6:72823596-72823615 None:intergenic 30.0%
! TCCACCATCTTTAAAAAAGT+TGG + Chr6:72824574-72824593 MsG0680033754.01.T01:intron 30.0%
!! CATTTTAGTCCTCAAAATGA+GGG + Chr6:72824913-72824932 MsG0680033754.01.T01:intron 30.0%
!! GTTTTTCGACGATATCATTA+AGG - Chr6:72822730-72822749 None:intergenic 30.0%
!! TCATTTTAGTCCTCAAAATG+AGG + Chr6:72824912-72824931 MsG0680033754.01.T01:intron 30.0%
!!! AAAAATTTGGTTTTGGTCCT+TGG - Chr6:72825016-72825035 None:intergenic 30.0%
!!! AAGCCCAACTTTTTTAAAGA+TGG - Chr6:72824581-72824600 None:intergenic 30.0%
!!! GGTATGTTGACTTTTATGAT+TGG + Chr6:72823050-72823069 MsG0680033754.01.T01:intron 30.0%
ACTCAATAGGCCTCTAATTA+AGG + Chr6:72823540-72823559 MsG0680033754.01.T01:intron 35.0%
ATCAGTCAAAGTTCGCTAAT+TGG + Chr6:72822960-72822979 MsG0680033754.01.T01:CDS 35.0%
ATCCATTCGGTCAAAATACT+CGG + Chr6:72823891-72823910 MsG0680033754.01.T01:intron 35.0%
CCAAAACGCTAGATATTTAC+AGG - Chr6:72824766-72824785 None:intergenic 35.0%
CCAAACAGTCTAAGTTATCA+TGG - Chr6:72825289-72825308 None:intergenic 35.0%
CCATGATAACTTAGACTGTT+TGG + Chr6:72825286-72825305 MsG0680033754.01.T01:intron 35.0%
CTCATTACTTCATTAGGATC+CGG - Chr6:72824644-72824663 None:intergenic 35.0%
CTCTAAGCAAGTTCAAGAAT+TGG + Chr6:72825584-72825603 MsG0680033754.01.T01:CDS 35.0%
CTTAGACTGTTTGGAAATCT+AGG + Chr6:72825295-72825314 MsG0680033754.01.T01:intron 35.0%
CTTATCTTCCTCCATAAACA+AGG - Chr6:72824446-72824465 None:intergenic 35.0%
GATCCTAATGAAGTAATGAG+AGG + Chr6:72824644-72824663 MsG0680033754.01.T01:intron 35.0%
TAAACATATAGTTGGCCGTA+TGG - Chr6:72823831-72823850 None:intergenic 35.0%
TATGGAGGAAGATAAGTTAG+AGG + Chr6:72824450-72824469 MsG0680033754.01.T01:intron 35.0%
TGACTGATACAGATCAAAGT+TGG - Chr6:72822948-72822967 None:intergenic 35.0%
TGGAACACAAACAACTATGA+AGG - Chr6:72824558-72824577 None:intergenic 35.0%
! AAGAAAGAGCAAAAGGGTTT+TGG + Chr6:72825250-72825269 MsG0680033754.01.T01:intron 35.0%
! ATACTCGGTTATGTGTCATT+TGG + Chr6:72823906-72823925 MsG0680033754.01.T01:intron 35.0%
! CCTGTAAATATCTAGCGTTT+TGG + Chr6:72824763-72824782 MsG0680033754.01.T01:intron 35.0%
! GATCTTATCCTTGTTTATGG+AGG + Chr6:72824435-72824454 MsG0680033754.01.T01:intron 35.0%
! GTCGATCTTATCCTTGTTTA+TGG + Chr6:72824432-72824451 MsG0680033754.01.T01:intron 35.0%
! TTTTTCCAAACAGCTAAGCA+TGG - Chr6:72823699-72823718 None:intergenic 35.0%
!! CAACTATTATCAGAAGCACT+TGG + Chr6:72825621-72825640 MsG0680033754.01.T01:CDS 35.0%
!! GATTTTAGTCCCTCATTTTG+AGG - Chr6:72824925-72824944 None:intergenic 35.0%
!!! CAAAAGGGTTTTGGTTGATA+CGG + Chr6:72825259-72825278 MsG0680033754.01.T01:intron 35.0%
!!! CCCAACTTTTTTAAAGATGG+TGG - Chr6:72824578-72824597 None:intergenic 35.0%
!!! GAATATTTGGTTTTGGTCCT+TGG + Chr6:72824834-72824853 MsG0680033754.01.T01:intron 35.0%
AATACCGGTGAAACTATTGG+AGG + Chr6:72822820-72822839 MsG0680033754.01.T01:CDS 40.0%
ACATTTGTATCTTCCTGCGT+TGG + Chr6:72823733-72823752 MsG0680033754.01.T01:intron 40.0%
AGGAATGTTGAACTGTGTAG+AGG - Chr6:72822699-72822718 None:intergenic 40.0%
AGTCAAAGTTCGCTAATTGG+AGG + Chr6:72822963-72822982 MsG0680033754.01.T01:CDS 40.0%
ATAAGATCGACAAACAACGC+AGG - Chr6:72824423-72824442 None:intergenic 40.0%
ATCTCCTCCAATAGTTTCAC+CGG - Chr6:72822827-72822846 None:intergenic 40.0%
CAATAACTGATATGAGCCAC+CGG - Chr6:72825174-72825193 None:intergenic 40.0%
CAGCTAAGCATGGATAGAAT+AGG - Chr6:72823689-72823708 None:intergenic 40.0%
CCTAGAGAAAACAATCACCT+TGG - Chr6:72824607-72824626 None:intergenic 40.0%
CTGAGTATTTCACTAGGGAT+GGG + Chr6:72822894-72822913 MsG0680033754.01.T01:CDS 40.0%
CTGATGTTGTGTCTGTAATC+CGG + Chr6:72822753-72822772 MsG0680033754.01.T01:CDS 40.0%
GAAACTATTGGAGGAGATGT+TGG + Chr6:72822829-72822848 MsG0680033754.01.T01:CDS 40.0%
GAAGGCTGAGTATTTCACTA+GGG + Chr6:72822889-72822908 MsG0680033754.01.T01:CDS 40.0%
GATACACTGTCTTGTGTGAT+GGG + Chr6:72822986-72823005 MsG0680033754.01.T01:CDS 40.0%
GTCAAAGTTCGCTAATTGGA+GGG + Chr6:72822964-72822983 MsG0680033754.01.T01:CDS 40.0%
TACAATCCATGCCTTCAAGA+TGG - Chr6:72825659-72825678 None:intergenic 40.0%
TCAACATACCTACAGACAGA+AGG - Chr6:72823040-72823059 None:intergenic 40.0%
TCTATCCATGCTTAGCTGTT+TGG + Chr6:72823691-72823710 MsG0680033754.01.T01:intron 40.0%
TGAAGGCTGAGTATTTCACT+AGG + Chr6:72822888-72822907 MsG0680033754.01.T01:CDS 40.0%
TGGAATACCGGTGAAACTAT+TGG + Chr6:72822817-72822836 MsG0680033754.01.T01:CDS 40.0%
TGGGCATAAAATGAAGAGAG+TGG + Chr6:72822913-72822932 MsG0680033754.01.T01:CDS 40.0%
! AAGCTCTTATCGTGGTGTTA+AGG + Chr6:72825376-72825395 MsG0680033754.01.T01:intron 40.0%
! AGCTCTTATCGTGGTGTTAA+GGG + Chr6:72825377-72825396 MsG0680033754.01.T01:intron 40.0%
! CCAAGGTGATTGTTTTCTCT+AGG + Chr6:72824604-72824623 MsG0680033754.01.T01:intron 40.0%
! GAAGGCATGGATTGTACAAA+AGG + Chr6:72825663-72825682 MsG0680033754.01.T01:CDS 40.0%
! TACTTCAAAGGTGTGGATAG+AGG + Chr6:72825144-72825163 MsG0680033754.01.T01:intron 40.0%
! TTTTTCCAGGTGGTGAATCA+TGG + Chr6:72822797-72822816 MsG0680033754.01.T01:CDS 40.0%
!! GCATCGAGAGTTTTATCTTG+AGG + Chr6:72824087-72824106 MsG0680033754.01.T01:intron 40.0%
!!! AACCGAGTATTTTGACCGAA+TGG - Chr6:72823896-72823915 None:intergenic 40.0%
AAAAAGTTGGGCTTCGTCCA+AGG + Chr6:72824587-72824606 MsG0680033754.01.T01:intron 45.0%
AACTCGAGCTTGAGTTTGTG+CGG - Chr6:72823399-72823418 None:intergenic 45.0%
AAGAACTGCCTTCTGTCTGT+AGG + Chr6:72823029-72823048 MsG0680033754.01.T01:CDS 45.0%
ACTATTGGAGGAGATGTTGG+CGG + Chr6:72822832-72822851 MsG0680033754.01.T01:CDS 45.0%
ATAGTTGGCCGTATGGAAAG+CGG - Chr6:72823824-72823843 None:intergenic 45.0%
ATCCATGAACTCGTGCTTGA+TGG + Chr6:72824213-72824232 MsG0680033754.01.T01:intron 45.0%
CCAACTACTCGACAACAACA+TGG - Chr6:72823778-72823797 None:intergenic 45.0%
CCATGTTGTTGTCGAGTAGT+TGG + Chr6:72823775-72823794 MsG0680033754.01.T01:intron 45.0%
CTCAAGACTGACCATCTTGA+AGG + Chr6:72825645-72825664 MsG0680033754.01.T01:CDS 45.0%
GCTGAGTATTTCACTAGGGA+TGG + Chr6:72822893-72822912 MsG0680033754.01.T01:CDS 45.0%
GGATACACTGTCTTGTGTGA+TGG + Chr6:72822985-72823004 MsG0680033754.01.T01:CDS 45.0%
GGGACTAAACCACTCAATCT+TGG + Chr6:72823625-72823644 MsG0680033754.01.T01:intron 45.0%
GGTGGTGAATCATGGAATAC+CGG + Chr6:72822805-72822824 MsG0680033754.01.T01:CDS 45.0%
GTATTCCATGATTCACCACC+TGG - Chr6:72822805-72822824 None:intergenic 45.0%
GTCTTAGATGAAACCAACGC+AGG - Chr6:72823749-72823768 None:intergenic 45.0%
TAAACCACTCAATCTTGGCG+AGG + Chr6:72823630-72823649 MsG0680033754.01.T01:intron 45.0%
TACTCAGCCTTCATCTCTTG+TGG - Chr6:72822881-72822900 None:intergenic 45.0%
TCATCTCTTGTGGAAGCTCA+TGG - Chr6:72822871-72822890 None:intergenic 45.0%
TCCATGAACTCGTGCTTGAT+GGG + Chr6:72824214-72824233 MsG0680033754.01.T01:intron 45.0%
TCTTGTGGATCAAGAGGTTC+AGG - Chr6:72823013-72823032 None:intergenic 45.0%
TGAGCTTCCACAAGAGATGA+AGG + Chr6:72822871-72822890 MsG0680033754.01.T01:CDS 45.0%
! TGAAGTGTCATACGTCGTCT+AGG - Chr6:72824476-72824495 None:intergenic 45.0%
! TGTTCTAGCCGCTTTCCATA+CGG + Chr6:72823813-72823832 MsG0680033754.01.T01:intron 45.0%
!! CTCGGTTATGTGTCATTTGG+TGG + Chr6:72823909-72823928 MsG0680033754.01.T01:intron 45.0%
!!! AATTTATTTAGTTTAATTTA+AGG + Chr6:72824004-72824023 MsG0680033754.01.T01:intron 5.0%
!!! AATTTTTTTTTATATCATTA+AGG - Chr6:72823488-72823507 None:intergenic 5.0%
ACCCATCAAGCACGAGTTCA+TGG - Chr6:72824218-72824237 None:intergenic 50.0%
ATCGTCGAGTGCTTGTGTTG+GGG + Chr6:72824678-72824697 MsG0680033754.01.T01:intron 50.0%
CAGACAGAAGGCAGTTCTTG+TGG - Chr6:72823028-72823047 None:intergenic 50.0%
CATCGTCGAGTGCTTGTGTT+GGG + Chr6:72824677-72824696 MsG0680033754.01.T01:intron 50.0%
GACTGACCATCTTGAAGGCA+TGG + Chr6:72825650-72825669 MsG0680033754.01.T01:CDS 50.0%
GCATCCAGCTCGAACTCAAT+AGG + Chr6:72823527-72823546 MsG0680033754.01.T01:intron 50.0%
GGCAGTTCTTGTGGATCAAG+AGG - Chr6:72823019-72823038 None:intergenic 50.0%
TGTTGTGTCTGTAATCCGGC+AGG + Chr6:72822757-72822776 MsG0680033754.01.T01:CDS 50.0%
! AACAGCTGGGTTTTTCCAGG+TGG + Chr6:72822787-72822806 MsG0680033754.01.T01:CDS 50.0%
! TGGAACAGCTGGGTTTTTCC+AGG + Chr6:72822784-72822803 MsG0680033754.01.T01:CDS 50.0%
!! AGGTGTGGATAGAGGTGTTC+CGG + Chr6:72825152-72825171 MsG0680033754.01.T01:intron 50.0%
!! TGGTTCGGTCGTCATCCATT+CGG + Chr6:72823878-72823897 MsG0680033754.01.T01:intron 50.0%
ATTGGAGGAGATGTTGGCGG+TGG + Chr6:72822835-72822854 MsG0680033754.01.T01:CDS 55.0%
CTGTGTAGAGGTCAGTTCGC+CGG - Chr6:72822687-72822706 None:intergenic 55.0%
GAGGCCTATTGAGTTCGAGC+TGG - Chr6:72823534-72823553 None:intergenic 55.0%
GCATCGTCGAGTGCTTGTGT+TGG + Chr6:72824676-72824695 MsG0680033754.01.T01:intron 55.0%
TCGTCCTCGCCAAGATTGAG+TGG - Chr6:72823637-72823656 None:intergenic 55.0%
! AGGTCAGTTCGCCGGCTATT+GGG - Chr6:72822679-72822698 None:intergenic 55.0%
! GTGTTGGCGATTTCTTCGGG+TGG - Chr6:72822653-72822672 None:intergenic 55.0%
!! GCGGTGTTGGCGATTTCTTC+GGG - Chr6:72822656-72822675 None:intergenic 55.0%
!! GGCGGTGTTGGCGATTTCTT+CGG - Chr6:72822657-72822676 None:intergenic 55.0%
!! TGTGGATAGAGGTGTTCCGG+TGG + Chr6:72825155-72825174 MsG0680033754.01.T01:intron 55.0%
TCTGTAATCCGGCAGGCAGC+TGG + Chr6:72822764-72822783 MsG0680033754.01.T01:CDS 60.0%
! GAGGTCAGTTCGCCGGCTAT+TGG - Chr6:72822680-72822699 None:intergenic 60.0%
! GGTCAGTTCGCCGGCTATTG+GGG - Chr6:72822678-72822697 None:intergenic 60.0%
CAGCTGTTCCAGCTGCCTGC+CGG - Chr6:72822775-72822794 None:intergenic 65.0%
GCCAACACCGCCCCAATAGC+CGG + Chr6:72822665-72822684 MsG0680033754.01.T01:CDS 65.0%
GGCAGGCAGCTGGAACAGCT+GGG + Chr6:72822774-72822793 MsG0680033754.01.T01:CDS 65.0%
! CAGTTCGCCGGCTATTGGGG+CGG - Chr6:72822675-72822694 None:intergenic 65.0%
CGGCAGGCAGCTGGAACAGC+TGG + Chr6:72822773-72822792 MsG0680033754.01.T01:CDS 70.0%
GCCGGCTATTGGGGCGGTGT+TGG - Chr6:72822669-72822688 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 72822647 72825692 72822647 ID=MsG0680033754.01;Name=MsG0680033754.01
Chr6 mRNA 72822647 72825692 72822647 ID=MsG0680033754.01.T01;Parent=MsG0680033754.01;Name=MsG0680033754.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|1|1|2|0|176
Chr6 exon 72822647 72823050 72822647 ID=MsG0680033754.01.T01:exon:3942;Parent=MsG0680033754.01.T01
Chr6 exon 72825566 72825692 72825566 ID=MsG0680033754.01.T01:exon:3941;Parent=MsG0680033754.01.T01
Chr6 CDS 72822647 72823050 72822647 ID=MsG0680033754.01.T01:cds;Parent=MsG0680033754.01.T01
Chr6 CDS 72825566 72825692 72825566 ID=MsG0680033754.01.T01:cds;Parent=MsG0680033754.01.T01
Gene Sequence

>MsG0680033754.01.T01

ATGCCACCCGAAGAAATCGCCAACACCGCCCCAATAGCCGGCGAACTGACCTCTACACAGTTCAACATTCCTGTAATAGACCTTAATGATATCGTCGAAAAACGCGCTGATGTTGTGTCTGTAATCCGGCAGGCAGCTGGAACAGCTGGGTTTTTCCAGGTGGTGAATCATGGAATACCGGTGAAACTATTGGAGGAGATGTTGGCGGTGGTACGTGAGTTCCATGAGCTTCCACAAGAGATGAAGGCTGAGTATTTCACTAGGGATGGGCATAAAATGAAGAGAGTGGTGTATAGATCCAACTTTGATCTGTATCAGTCAAAGTTCGCTAATTGGAGGGATACACTGTCTTGTGTGATGGGTCCTGAACCTCTTGATCCACAAGAACTGCCTTCTGTCTGTAGGGATGTAACAATGAAATACTCTAAGCAAGTTCAAGAATTGGGTCATCTTGTGTTTCAACTATTATCAGAAGCACTTGGACTCAAGACTGACCATCTTGAAGGCATGGATTGTACAAAAGGCATATAA

Protein sequence

>MsG0680033754.01.T01

MPPEEIANTAPIAGELTSTQFNIPVIDLNDIVEKRADVVSVIRQAAGTAGFFQVVNHGIPVKLLEEMLAVVREFHELPQEMKAEYFTRDGHKMKRVVYRSNFDLYQSKFANWRDTLSCVMGPEPLDPQELPSVCRDVTMKYSKQVQELGHLVFQLLSEALGLKTDHLEGMDCTKGI*