Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045401.01.T01 | RHN41736.1 | 68.354 | 79 | 25 | 0 | 42 | 120 | 65 | 143 | 1.46E-21 | 98.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045401.01.T01 | A0A396GKU2 | 68.354 | 79 | 25 | 0 | 42 | 120 | 65 | 143 | 6.96e-22 | 98.2 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048969.01 | MsG0880045401.01 | 0.843117 | 1.706223e-58 | 2.642407e-55 |
| MsG0180000017.01 | MsG0880045401.01 | 0.822309 | 2.537286e-53 | 2.115990e-50 |
| MsG0180000040.01 | MsG0880045401.01 | 0.840495 | 8.400677e-58 | 1.198785e-54 |
| MsG0180000489.01 | MsG0880045401.01 | 0.804884 | 1.743446e-49 | 9.094317e-47 |
| MsG0180000490.01 | MsG0880045401.01 | 0.828061 | 1.108513e-54 | 1.089804e-51 |
| MsG0180000491.01 | MsG0880045401.01 | 0.826441 | 2.707743e-54 | 2.539684e-51 |
| MsG0180000655.01 | MsG0880045401.01 | 0.806428 | 8.264726e-50 | 4.484792e-47 |
| MsG0180000942.01 | MsG0880045401.01 | 0.825683 | 4.101286e-54 | 3.764519e-51 |
| MsG0180000976.01 | MsG0880045401.01 | 0.824615 | 7.332508e-54 | 6.528959e-51 |
| MsG0180001907.01 | MsG0880045401.01 | 0.817284 | 3.570863e-52 | 2.589500e-49 |
| MsG0880044105.01 | MsG0880045401.01 | 0.814656 | 1.378988e-51 | 9.307272e-49 |
| MsG0880044619.01 | MsG0880045401.01 | 0.808905 | 2.461188e-50 | 1.424535e-47 |
| MsG0880044620.01 | MsG0880045401.01 | 0.809959 | 1.462298e-50 | 8.704821e-48 |
| MsG0880044625.01 | MsG0880045401.01 | 0.816791 | 4.609796e-52 | 3.298108e-49 |
| MsG0880044626.01 | MsG0880045401.01 | 0.851560 | 8.197855e-61 | 1.665808e-57 |
| MsG0880044629.01 | MsG0880045401.01 | 0.809478 | 1.854973e-50 | 1.090248e-47 |
| MsG0880044636.01 | MsG0880045401.01 | 0.817363 | 3.428198e-52 | 2.491486e-49 |
| MsG0880045031.01 | MsG0880045401.01 | 0.811787 | 5.877454e-51 | 3.671870e-48 |
| MsG0880045377.01 | MsG0880045401.01 | 0.832586 | 8.687116e-56 | 9.752897e-53 |
| MsG0880045378.01 | MsG0880045401.01 | 0.855647 | 5.484431e-62 | 1.275034e-58 |
| MsG0880045400.01 | MsG0880045401.01 | 0.847191 | 1.352141e-59 | 2.384401e-56 |
| MsG0880045401.01 | MsG0880045409.01 | 0.876281 | 1.581715e-68 | 7.623328e-65 |
| MsG0880045401.01 | MsG0880045423.01 | 0.891078 | 5.515693e-74 | 4.765603e-70 |
| MsG0880045401.01 | MsG0880045927.01 | 0.806565 | 7.735088e-50 | 4.211986e-47 |
| MsG0880045401.01 | MsG0880045929.01 | 0.805790 | 1.125941e-49 | 6.011189e-47 |
| MsG0880045401.01 | MsG0880046048.01 | 0.839589 | 1.447862e-57 | 2.008658e-54 |
| MsG0880045401.01 | MsG0880046160.01 | 0.846591 | 1.972456e-59 | 3.411905e-56 |
| MsG0880045401.01 | MsG0880046408.01 | 0.804263 | 2.348790e-49 | 1.205590e-46 |
| MsG0880045401.01 | MsG0880046969.01 | 0.808833 | 2.550271e-50 | 1.473280e-47 |
| MsG0880045401.01 | MsG0880047111.01 | 0.819099 | 1.387269e-52 | 1.057560e-49 |
| MsG0880045401.01 | MsG0880047112.01 | 0.825301 | 5.049981e-54 | 4.585166e-51 |
| MsG0880045401.01 | MsG0880047660.01 | 0.818327 | 2.076989e-52 | 1.549942e-49 |
| MsG0180002891.01 | MsG0880045401.01 | 0.828873 | 7.058107e-55 | 7.103923e-52 |
| MsG0180003503.01 | MsG0880045401.01 | 0.816804 | 4.578671e-52 | 3.276944e-49 |
| MsG0180004106.01 | MsG0880045401.01 | 0.804379 | 2.222105e-49 | 1.144008e-46 |
| MsG0180005561.01 | MsG0880045401.01 | 0.803454 | 3.459781e-49 | 1.739303e-46 |
| MsG0180005991.01 | MsG0880045401.01 | 0.821132 | 4.748860e-53 | 3.830876e-50 |
| MsG0180006177.01 | MsG0880045401.01 | 0.801550 | 8.542118e-49 | 4.090819e-46 |
| MsG0780040319.01 | MsG0880045401.01 | 0.843204 | 1.617768e-58 | 2.512355e-55 |
| MsG0780040343.01 | MsG0880045401.01 | 0.805054 | 1.606721e-49 | 8.416902e-47 |
| MsG0780040412.01 | MsG0880045401.01 | 0.819575 | 1.080745e-52 | 8.348884e-50 |
| MsG0780040413.01 | MsG0880045401.01 | 0.825308 | 5.032453e-54 | 4.570014e-51 |
| MsG0780041129.01 | MsG0880045401.01 | 0.819668 | 1.029278e-52 | 7.971585e-50 |
| MsG0780041256.01 | MsG0880045401.01 | 0.809096 | 2.239694e-50 | 1.303081e-47 |
| MsG0780041385.01 | MsG0880045401.01 | 0.811726 | 6.060068e-51 | 3.779954e-48 |
| MsG0780041706.01 | MsG0880045401.01 | 0.812972 | 3.239811e-51 | 2.089012e-48 |
| MsG0780041778.01 | MsG0880045401.01 | 0.826701 | 2.348196e-54 | 2.218710e-51 |
| MsG0880041850.01 | MsG0880045401.01 | 0.839849 | 1.239084e-57 | 1.732933e-54 |
| MsG0880042002.01 | MsG0880045401.01 | 0.804530 | 2.066941e-49 | 1.068200e-46 |
| MsG0880042030.01 | MsG0880045401.01 | 0.800043 | 1.733821e-48 | 7.992608e-46 |
| MsG0880042084.01 | MsG0880045401.01 | 0.851270 | 9.897776e-61 | 1.992544e-57 |
| MsG0880042256.01 | MsG0880045401.01 | 0.823867 | 1.098865e-53 | 9.577543e-51 |
| MsG0880042343.01 | MsG0880045401.01 | 0.865953 | 4.061247e-65 | 1.345576e-61 |
| MsG0880042416.01 | MsG0880045401.01 | 0.820547 | 6.473995e-53 | 5.138029e-50 |
| MsG0880042417.01 | MsG0880045401.01 | 0.810728 | 9.976268e-51 | 6.060521e-48 |
| MsG0880042690.01 | MsG0880045401.01 | 0.809583 | 1.761161e-50 | 1.038091e-47 |
| MsG0880042922.01 | MsG0880045401.01 | 0.811243 | 7.717005e-51 | 4.752328e-48 |
| MsG0880043107.01 | MsG0880045401.01 | 0.817455 | 3.269333e-52 | 2.382090e-49 |
| MsG0880043235.01 | MsG0880045401.01 | 0.842152 | 3.078540e-58 | 4.625733e-55 |
| MsG0880043250.01 | MsG0880045401.01 | 0.824264 | 8.870982e-54 | 7.818014e-51 |
| MsG0880043621.01 | MsG0880045401.01 | 0.807042 | 6.131449e-50 | 3.380124e-47 |
| MsG0280010998.01 | MsG0880045401.01 | 0.857027 | 2.157986e-62 | 5.252568e-59 |
| MsG0280011020.01 | MsG0880045401.01 | 0.827660 | 1.384086e-54 | 1.344770e-51 |
| MsG0280011169.01 | MsG0880045401.01 | 0.815893 | 7.320526e-52 | 5.110136e-49 |
| MsG0280011207.01 | MsG0880045401.01 | 0.811212 | 7.836540e-51 | 4.822149e-48 |
| MsG0280011270.01 | MsG0880045401.01 | 0.805727 | 1.160804e-49 | 6.187489e-47 |
| MsG0280011309.01 | MsG0880045401.01 | 0.842407 | 2.635501e-58 | 3.992499e-55 |
| MsG0380011662.01 | MsG0880045401.01 | 0.831403 | 1.703171e-55 | 1.846226e-52 |
| MsG0380011883.01 | MsG0880045401.01 | 0.811194 | 7.910486e-51 | 4.865154e-48 |
| MsG0380012251.01 | MsG0880045401.01 | 0.840224 | 9.892863e-58 | 1.399885e-54 |
| MsG0380012583.01 | MsG0880045401.01 | 0.828117 | 1.074436e-54 | 1.058071e-51 |
| MsG0380012782.01 | MsG0880045401.01 | 0.811716 | 6.091185e-51 | 3.798174e-48 |
| MsG0380014144.01 | MsG0880045401.01 | 0.854635 | 1.079565e-61 | 2.426705e-58 |
| MsG0380014510.01 | MsG0880045401.01 | 0.837395 | 5.331146e-57 | 6.915404e-54 |
| MsG0380014517.01 | MsG0880045401.01 | 0.805411 | 1.352370e-49 | 7.149803e-47 |
| MsG0380014557.01 | MsG0880045401.01 | 0.804379 | 2.221847e-49 | 1.143882e-46 |
| MsG0680031996.01 | MsG0880045401.01 | 0.845389 | 4.187160e-59 | 6.966858e-56 |
| MsG0680031997.01 | MsG0880045401.01 | 0.857520 | 1.544035e-62 | 3.821484e-59 |
| MsG0680032000.01 | MsG0880045401.01 | 0.869379 | 3.236428e-66 | 1.212171e-62 |
| MsG0680032002.01 | MsG0880045401.01 | 0.856898 | 2.356645e-62 | 5.711183e-59 |
| MsG0680032003.01 | MsG0880045401.01 | 0.860583 | 1.867457e-63 | 5.130359e-60 |
| MsG0680032245.01 | MsG0880045401.01 | 0.819757 | 9.821011e-53 | 7.625382e-50 |
| MsG0680032246.01 | MsG0880045401.01 | 0.834354 | 3.146207e-56 | 3.724406e-53 |
| MsG0680032254.01 | MsG0880045401.01 | 0.803592 | 3.238466e-49 | 1.633934e-46 |
| MsG0680032274.01 | MsG0880045401.01 | 0.823675 | 1.218760e-53 | 1.056576e-50 |
| MsG0680032308.01 | MsG0880045401.01 | 0.810635 | 1.045132e-50 | 6.333032e-48 |
| MsG0480019604.01 | MsG0880045401.01 | 0.833238 | 5.982608e-56 | 6.848469e-53 |
| MsG0480019693.01 | MsG0880045401.01 | 0.808788 | 2.607223e-50 | 1.504384e-47 |
| MsG0480019752.01 | MsG0880045401.01 | 0.804278 | 2.332362e-49 | 1.197625e-46 |
| MsG0480020229.01 | MsG0880045401.01 | 0.836617 | 8.426633e-57 | 1.067550e-53 |
| MsG0480020433.01 | MsG0880045401.01 | 0.815520 | 8.863764e-52 | 6.125168e-49 |
| MsG0480020473.01 | MsG0880045401.01 | 0.804759 | 1.851773e-49 | 9.627613e-47 |
| MsG0480021789.01 | MsG0880045401.01 | 0.814405 | 1.566752e-51 | 1.050390e-48 |
| MsG0480021892.01 | MsG0880045401.01 | 0.833883 | 4.129184e-56 | 4.819460e-53 |
| MsG0480021895.01 | MsG0880045401.01 | 0.831178 | 1.933809e-55 | 2.082291e-52 |
| MsG0480021999.01 | MsG0880045401.01 | 0.814905 | 1.214328e-51 | 8.250882e-49 |
| MsG0480022664.01 | MsG0880045401.01 | 0.835528 | 1.592352e-56 | 1.952367e-53 |
| MsG0480023148.01 | MsG0880045401.01 | 0.823095 | 1.665219e-53 | 1.420087e-50 |
| MsG0480023616.01 | MsG0880045401.01 | 0.813958 | 1.966738e-51 | 1.302556e-48 |
| MsG0480023821.01 | MsG0880045401.01 | 0.806623 | 7.517813e-50 | 4.099591e-47 |
| MsG0580024201.01 | MsG0880045401.01 | 0.840195 | 1.006302e-57 | 1.422726e-54 |
| MsG0580024340.01 | MsG0880045401.01 | 0.804967 | 1.674914e-49 | 8.755005e-47 |
| MsG0580024360.01 | MsG0880045401.01 | 0.800900 | 1.159886e-48 | 5.464797e-46 |
| MsG0580024455.01 | MsG0880045401.01 | 0.800070 | 1.712715e-48 | 7.900672e-46 |
| MsG0580024608.01 | MsG0880045401.01 | 0.828715 | 7.706819e-55 | 7.721715e-52 |
| MsG0580024763.01 | MsG0880045401.01 | 0.804792 | 1.822221e-49 | 9.482108e-47 |
| MsG0580025301.01 | MsG0880045401.01 | 0.849999 | 2.254726e-60 | 4.353477e-57 |
| MsG0380014936.01 | MsG0880045401.01 | 0.832983 | 6.923889e-56 | 7.866178e-53 |
| MsG0380015501.01 | MsG0880045401.01 | 0.811795 | 5.854097e-51 | 3.658050e-48 |
| MsG0380016151.01 | MsG0880045401.01 | 0.833848 | 4.212376e-56 | 4.911567e-53 |
| MsG0380016399.01 | MsG0880045401.01 | 0.800098 | 1.690320e-48 | 7.802878e-46 |
| MsG0380016452.01 | MsG0880045401.01 | 0.803593 | 3.237169e-49 | 1.633318e-46 |
| MsG0380016542.01 | MsG0880045401.01 | 0.809739 | 1.630390e-50 | 9.649885e-48 |
| MsG0380016545.01 | MsG0880045401.01 | 0.803641 | 3.164486e-49 | 1.598530e-46 |
| MsG0380016997.01 | MsG0880045401.01 | 0.802950 | 4.398042e-49 | 2.182625e-46 |
| MsG0380017353.01 | MsG0880045401.01 | 0.825775 | 3.899027e-54 | 3.588411e-51 |
| MsG0480018329.01 | MsG0880045401.01 | 0.800351 | 1.501077e-48 | 6.974203e-46 |
| MsG0580027098.01 | MsG0880045401.01 | 0.807712 | 4.420197e-50 | 2.479621e-47 |
| MsG0580027348.01 | MsG0880045401.01 | 0.822533 | 2.251376e-53 | 1.889616e-50 |
| MsG0580027845.01 | MsG0880045401.01 | 0.814615 | 1.408040e-51 | 9.493100e-49 |
| MsG0580028092.01 | MsG0880045401.01 | 0.816869 | 4.427048e-52 | 3.174289e-49 |
| MsG0580028093.01 | MsG0880045401.01 | 0.812425 | 4.267006e-51 | 2.712273e-48 |
| MsG0580028177.01 | MsG0880045401.01 | 0.836280 | 1.026240e-56 | 1.287375e-53 |
| MsG0580028179.01 | MsG0880045401.01 | 0.805389 | 1.367140e-49 | 7.223543e-47 |
| MsG0580028552.01 | MsG0880045401.01 | 0.805867 | 1.084944e-49 | 5.803748e-47 |
| MsG0580029389.01 | MsG0880045401.01 | 0.810117 | 1.352095e-50 | 8.082001e-48 |
| MsG0580029394.01 | MsG0880045401.01 | 0.830158 | 3.436969e-55 | 3.592022e-52 |
| MsG0580029433.01 | MsG0880045401.01 | 0.813461 | 2.529545e-51 | 1.653054e-48 |
| MsG0280006553.01 | MsG0880045401.01 | 0.800466 | 1.422490e-48 | 6.627936e-46 |
| MsG0280007511.01 | MsG0880045401.01 | 0.805248 | 1.463019e-49 | 7.702219e-47 |
| MsG0280009103.01 | MsG0880045401.01 | 0.801815 | 7.535893e-49 | 3.633397e-46 |
| MsG0280009435.01 | MsG0880045401.01 | 0.821671 | 3.567704e-53 | 2.921553e-50 |
| MsG0280009436.01 | MsG0880045401.01 | 0.819781 | 9.697907e-53 | 7.534989e-50 |
| MsG0280009901.01 | MsG0880045401.01 | 0.852925 | 3.352555e-61 | 7.118190e-58 |
| MsG0280009960.01 | MsG0880045401.01 | 0.807279 | 5.461584e-50 | 3.029585e-47 |
| MsG0280010523.01 | MsG0880045401.01 | 0.830496 | 2.842064e-55 | 2.999277e-52 |
| MsG0780036182.01 | MsG0880045401.01 | 0.803644 | 3.159981e-49 | 1.596356e-46 |
| MsG0780036218.01 | MsG0880045401.01 | 0.801583 | 8.406552e-49 | 4.029299e-46 |
| MsG0780036509.01 | MsG0880045401.01 | 0.806114 | 9.624474e-50 | 5.181019e-47 |
| MsG0780036613.01 | MsG0880045401.01 | 0.843920 | 1.041294e-58 | 1.654181e-55 |
| MsG0780036620.01 | MsG0880045401.01 | 0.802347 | 5.858524e-49 | 2.863217e-46 |
| MsG0780036846.01 | MsG0880045401.01 | 0.854952 | 8.733789e-62 | 1.983998e-58 |
| MsG0780037351.01 | MsG0880045401.01 | 0.802745 | 4.848681e-49 | 2.393848e-46 |
| MsG0780037453.01 | MsG0880045401.01 | 0.842602 | 2.339642e-58 | 3.565678e-55 |
| MsG0780039795.01 | MsG0880045401.01 | 0.825876 | 3.689711e-54 | 3.405581e-51 |
| MsG0780039986.01 | MsG0880045401.01 | 0.803909 | 2.783739e-49 | 1.416001e-46 |
| MsG0780040155.01 | MsG0880045401.01 | 0.820475 | 6.727187e-53 | 5.328323e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045401.01.T01 | MTR_8g070890 | 85.965 | 57 | 7 | 1 | 65 | 120 | 13 | 69 | 2.80e-25 | 96.3 |
| MsG0880045401.01.T01 | MTR_8g070880 | 68.750 | 80 | 23 | 2 | 42 | 120 | 65 | 143 | 5.83e-24 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045401.01.T01 | AT1G79620 | 50.633 | 79 | 39 | 0 | 42 | 120 | 73 | 151 | 7.50e-16 | 72.8 |
| MsG0880045401.01.T01 | AT1G79620 | 50.633 | 79 | 39 | 0 | 42 | 120 | 73 | 151 | 7.74e-16 | 72.8 |
| MsG0880045401.01.T01 | AT1G79620 | 50.633 | 79 | 39 | 0 | 42 | 120 | 73 | 151 | 9.88e-16 | 72.4 |
| MsG0880045401.01.T01 | AT1G79620 | 50.633 | 79 | 39 | 0 | 42 | 120 | 73 | 151 | 1.02e-15 | 72.4 |
| MsG0880045401.01.T01 | AT1G79620 | 50.633 | 79 | 39 | 0 | 42 | 120 | 73 | 151 | 1.39e-15 | 72.0 |
Find 20 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAATTCGATATACTTTA+AGG | 0.082582 | 8:-58770926 | MsG0880045401.01.T01:CDS |
| AATTAACCGTTTCAGGATTT+TGG | 0.091828 | 8:-58770116 | MsG0880045401.01.T01:intron |
| GTCCTTTAATAAAGGTTTAA+TGG | 0.162551 | 8:-58770264 | MsG0880045401.01.T01:CDS |
| ACCCATTAAACCTTTATTAA+AGG | 0.167669 | 8:+58770262 | None:intergenic |
| TTGGATGGAAATTGTTACTA+TGG | 0.311539 | 8:-58770757 | MsG0880045401.01.T01:CDS |
| TCCTTTAATAAAGGTTTAAT+GGG | 0.312324 | 8:-58770263 | MsG0880045401.01.T01:CDS |
| TTGCTTAAGTCTCCCAGTTC+TGG | 0.319541 | 8:+58770230 | None:intergenic |
| ATCTGCTGTTAGGCGACTTT+GGG | 0.325585 | 8:-58770806 | MsG0880045401.01.T01:CDS |
| AGGGACTTGTCCTTTAATAA+AGG | 0.349948 | 8:-58770272 | MsG0880045401.01.T01:CDS |
| GGGTTCTATCTCTCCAGAAC+TGG | 0.382542 | 8:-58770243 | MsG0880045401.01.T01:CDS |
| TATCTGCTGTTAGGCGACTT+TGG | 0.398697 | 8:-58770807 | MsG0880045401.01.T01:CDS |
| TGGCAATATTCCAGATAGAT+TGG | 0.406263 | 8:-58770077 | MsG0880045401.01.T01:CDS |
| GGCAATATTCCAGATAGATT+GGG | 0.408938 | 8:-58770076 | MsG0880045401.01.T01:CDS |
| CAGAATGTATATCTGCTGTT+AGG | 0.468497 | 8:-58770816 | MsG0880045401.01.T01:CDS |
| TTGGCTGGTTGCAGCTTCAG+TGG | 0.503624 | 8:-58770097 | MsG0880045401.01.T01:CDS |
| ATTCGATATACTTTAAGGAC+TGG | 0.556252 | 8:-58770921 | MsG0880045401.01.T01:CDS |
| GGTTCTATCTCTCCAGAACT+GGG | 0.574112 | 8:-58770242 | MsG0880045401.01.T01:CDS |
| GCAATATTCCAGATAGATTG+GGG | 0.585469 | 8:-58770075 | MsG0880045401.01.T01:CDS |
| TGGCTACCGAACAAATGCAC+AGG | 0.624953 | 8:-58770901 | MsG0880045401.01.T01:CDS |
| CAATATTCCAGATAGATTGG+GGG | 0.728079 | 8:-58770074 | MsG0880045401.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAGAGACTAAAT+TGG | - | Chr8:58770475-58770494 | MsG0880045401.01.T01:intron | 15.0% |
| !!! | AACTTTTAGTAATTTTCATA+AGG | - | Chr8:58770819-58770838 | MsG0880045401.01.T01:CDS | 15.0% |
| !!! | TCTCTTTTTTTTTTTCTTTT+CGG | + | Chr8:58770469-58770488 | None:intergenic | 15.0% |
| !! | TAATATGCAAATACATTGTA+TGG | + | Chr8:58770648-58770667 | None:intergenic | 20.0% |
| !! | TCCTTTAATAAAGGTTTAAT+GGG | - | Chr8:58770701-58770720 | MsG0880045401.01.T01:intron | 20.0% |
| !!! | AAGTATTGTAATTGTGATTA+TGG | + | Chr8:58770559-58770578 | None:intergenic | 20.0% |
| !!! | AGATTTTGTTTTAAATAGAG+GGG | - | Chr8:58770305-58770324 | MsG0880045401.01.T01:intron | 20.0% |
| !!! | CAGATTTTGTTTTAAATAGA+GGG | - | Chr8:58770304-58770323 | MsG0880045401.01.T01:intron | 20.0% |
| !!! | TTTTATGACTAAAACTAAGT+TGG | + | Chr8:58770606-58770625 | None:intergenic | 20.0% |
| ! | ACCCATTAAACCTTTATTAA+AGG | + | Chr8:58770705-58770724 | None:intergenic | 25.0% |
| ! | GACAAATTCGATATACTTTA+AGG | - | Chr8:58770038-58770057 | MsG0880045401.01.T01:CDS | 25.0% |
| ! | GTCCTTTAATAAAGGTTTAA+TGG | - | Chr8:58770700-58770719 | MsG0880045401.01.T01:intron | 25.0% |
| !! | GATTTAAAATTAACCGTTTC+AGG | - | Chr8:58770841-58770860 | MsG0880045401.01.T01:CDS | 25.0% |
| !!! | CTAAAACTAAGTTGGTATTA+TGG | + | Chr8:58770598-58770617 | None:intergenic | 25.0% |
| !!! | GATTTTGTTTTAAATAGAGG+GGG | - | Chr8:58770306-58770325 | MsG0880045401.01.T01:intron | 25.0% |
| !!! | GCAGATTTTGTTTTAAATAG+AGG | - | Chr8:58770303-58770322 | MsG0880045401.01.T01:intron | 25.0% |
| AAAAATCCTGTGCATTTGTT+CGG | + | Chr8:58770072-58770091 | None:intergenic | 30.0% | |
| AATGACATTGGGAAATTAAC+AGG | + | Chr8:58770791-58770810 | None:intergenic | 30.0% | |
| AGTTTCACTTGAAATGACAT+TGG | + | Chr8:58770803-58770822 | None:intergenic | 30.0% | |
| GTTTCACTTGAAATGACATT+GGG | + | Chr8:58770802-58770821 | None:intergenic | 30.0% | |
| TTGGATGGAAATTGTTACTA+TGG | - | Chr8:58770207-58770226 | MsG0880045401.01.T01:intron | 30.0% | |
| ! | AATTAACCGTTTCAGGATTT+TGG | - | Chr8:58770848-58770867 | MsG0880045401.01.T01:CDS | 30.0% |
| ! | ATTCGATATACTTTAAGGAC+TGG | - | Chr8:58770043-58770062 | MsG0880045401.01.T01:CDS | 30.0% |
| !!! | TGCAATTTGTTTTGGATTGA+TGG | - | Chr8:58770368-58770387 | MsG0880045401.01.T01:intron | 30.0% |
| !!! | TTTTCTGGTTTTTAGTAGCA+GGG | - | Chr8:58770263-58770282 | MsG0880045401.01.T01:CDS | 30.0% |
| AGGGACTTGTCCTTTAATAA+AGG | - | Chr8:58770692-58770711 | MsG0880045401.01.T01:intron | 35.0% | |
| CAAACCACATTACAACTTTC+AGG | + | Chr8:58770408-58770427 | None:intergenic | 35.0% | |
| CAATATTCCAGATAGATTGG+GGG | - | Chr8:58770890-58770909 | MsG0880045401.01.T01:CDS | 35.0% | |
| CAGAATGTATATCTGCTGTT+AGG | - | Chr8:58770148-58770167 | MsG0880045401.01.T01:intron | 35.0% | |
| CTATATTGTAAACCACTGCA+CGG | + | Chr8:58770334-58770353 | None:intergenic | 35.0% | |
| CTGAAAGTTGTAATGTGGTT+TGG | - | Chr8:58770406-58770425 | MsG0880045401.01.T01:intron | 35.0% | |
| GCAATATTCCAGATAGATTG+GGG | - | Chr8:58770889-58770908 | MsG0880045401.01.T01:CDS | 35.0% | |
| GGCAATATTCCAGATAGATT+GGG | - | Chr8:58770888-58770907 | MsG0880045401.01.T01:CDS | 35.0% | |
| GTATAGAGTAAACTAGCTCA+TGG | + | Chr8:58770447-58770466 | None:intergenic | 35.0% | |
| TGGCAATATTCCAGATAGAT+TGG | - | Chr8:58770887-58770906 | MsG0880045401.01.T01:CDS | 35.0% | |
| TGTCAATTCATGTAACTGCA+GGG | - | Chr8:58770673-58770692 | MsG0880045401.01.T01:intron | 35.0% | |
| TGTTCCTGAAAGTTGTAATG+TGG | - | Chr8:58770401-58770420 | MsG0880045401.01.T01:intron | 35.0% | |
| ! | AATTGTTTGCTGCAGAATGT+AGG | - | Chr8:58770230-58770249 | MsG0880045401.01.T01:CDS | 35.0% |
| ! | CCATCCAAAGCAATTTTTGA+CGG | + | Chr8:58770195-58770214 | None:intergenic | 35.0% |
| ! | GAACAAATGCACAGGATTTT+TGG | - | Chr8:58770071-58770090 | MsG0880045401.01.T01:CDS | 35.0% |
| !!! | GTAGGAGACTTTTAGTTTTC+TGG | - | Chr8:58770248-58770267 | MsG0880045401.01.T01:CDS | 35.0% |
| !!! | GTTTTCTGGTTTTTAGTAGC+AGG | - | Chr8:58770262-58770281 | MsG0880045401.01.T01:CDS | 35.0% |
| !!! | TTTCTGGTTTTTAGTAGCAG+GGG | - | Chr8:58770264-58770283 | MsG0880045401.01.T01:CDS | 35.0% |
| AACCAGCCAAAATCCTGAAA+CGG | + | Chr8:58770857-58770876 | None:intergenic | 40.0% | |
| CAAAACAAATTGCACACGAG+TGG | + | Chr8:58770362-58770381 | None:intergenic | 40.0% | |
| CATGCCGTCAAAAATTGCTT+TGG | - | Chr8:58770188-58770207 | MsG0880045401.01.T01:intron | 40.0% | |
| GTGTCAATTCATGTAACTGC+AGG | - | Chr8:58770672-58770691 | MsG0880045401.01.T01:intron | 40.0% | |
| ! | AGTTGTAATGTGGTTTGGAG+CGG | - | Chr8:58770411-58770430 | MsG0880045401.01.T01:intron | 40.0% |
| ! | CAAAGCAATTTTTGACGGCA+TGG | + | Chr8:58770190-58770209 | None:intergenic | 40.0% |
| ! | CCGTCAAAAATTGCTTTGGA+TGG | - | Chr8:58770192-58770211 | MsG0880045401.01.T01:intron | 40.0% |
| !! | CACTCGTGTGCAATTTGTTT+TGG | - | Chr8:58770360-58770379 | MsG0880045401.01.T01:intron | 40.0% |
| !!! | AATGCACAGGATTTTTGGTC+AGG | - | Chr8:58770076-58770095 | MsG0880045401.01.T01:CDS | 40.0% |
| !!! | ATGCACAGGATTTTTGGTCA+GGG | - | Chr8:58770077-58770096 | MsG0880045401.01.T01:CDS | 40.0% |
| !!! | TTCTGGTTTTTAGTAGCAGG+GGG | - | Chr8:58770265-58770284 | MsG0880045401.01.T01:CDS | 40.0% |
| ATCTGCTGTTAGGCGACTTT+GGG | - | Chr8:58770158-58770177 | MsG0880045401.01.T01:intron | 45.0% | |
| GAAAGATCCCCCAATCTATC+TGG | + | Chr8:58770900-58770919 | None:intergenic | 45.0% | |
| GGTTCTATCTCTCCAGAACT+GGG | - | Chr8:58770722-58770741 | MsG0880045401.01.T01:intron | 45.0% | |
| TATCTGCTGTTAGGCGACTT+TGG | - | Chr8:58770157-58770176 | MsG0880045401.01.T01:intron | 45.0% | |
| TTGCTTAAGTCTCCCAGTTC+TGG | + | Chr8:58770737-58770756 | None:intergenic | 45.0% | |
| ! | AGCAATTTTTGACGGCATGG+AGG | + | Chr8:58770187-58770206 | None:intergenic | 45.0% |
| ! | CTGCTACTGCAGAATTTTGC+AGG | + | Chr8:58770125-58770144 | None:intergenic | 45.0% |
| !! | AACCGTTTCAGGATTTTGGC+TGG | - | Chr8:58770852-58770871 | MsG0880045401.01.T01:CDS | 45.0% |
| !!! | TCTGGTTTTTAGTAGCAGGG+GGG | - | Chr8:58770266-58770285 | MsG0880045401.01.T01:CDS | 45.0% |
| GGGTTCTATCTCTCCAGAAC+TGG | - | Chr8:58770721-58770740 | MsG0880045401.01.T01:intron | 50.0% | |
| TGGCTACCGAACAAATGCAC+AGG | - | Chr8:58770063-58770082 | MsG0880045401.01.T01:CDS | 50.0% | |
| !!! | CTGGTTTTTAGTAGCAGGGG+GGG | - | Chr8:58770267-58770286 | MsG0880045401.01.T01:CDS | 50.0% |
| ! | TTGGCTGGTTGCAGCTTCAG+TGG | - | Chr8:58770867-58770886 | MsG0880045401.01.T01:CDS | 55.0% |
| AGTAGCAGGGGGGGATGCAC+TGG | - | Chr8:58770276-58770295 | MsG0880045401.01.T01:intron | 65.0% | |
| ATAGAGGGGGAGCCGTGCAG+TGG | - | Chr8:58770319-58770338 | MsG0880045401.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 58770036 | 58770950 | 58770036 | ID=MsG0880045401.01;Name=MsG0880045401.01 |
| Chr8 | mRNA | 58770036 | 58770950 | 58770036 | ID=MsG0880045401.01.T01;Parent=MsG0880045401.01;Name=MsG0880045401.01.T01;_AED=0.50;_eAED=0.80;_QI=0|0|0|1|0.5|0.66|3|0|124 |
| Chr8 | exon | 58770739 | 58770950 | 58770739 | ID=MsG0880045401.01.T01:exon:22627;Parent=MsG0880045401.01.T01 |
| Chr8 | exon | 58770218 | 58770292 | 58770218 | ID=MsG0880045401.01.T01:exon:22626;Parent=MsG0880045401.01.T01 |
| Chr8 | exon | 58770036 | 58770123 | 58770036 | ID=MsG0880045401.01.T01:exon:22625;Parent=MsG0880045401.01.T01 |
| Chr8 | CDS | 58770739 | 58770950 | 58770739 | ID=MsG0880045401.01.T01:cds;Parent=MsG0880045401.01.T01 |
| Chr8 | CDS | 58770218 | 58770292 | 58770218 | ID=MsG0880045401.01.T01:cds;Parent=MsG0880045401.01.T01 |
| Chr8 | CDS | 58770036 | 58770123 | 58770036 | ID=MsG0880045401.01.T01:cds;Parent=MsG0880045401.01.T01 |
| Gene Sequence |
| Protein sequence |
