AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023821.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023821.01.T01 MTR_8g102980 97.414 348 8 1 1 348 1 347 0.0 697
MsG0480023821.01.T01 MTR_8g102980 97.321 336 8 1 1 336 1 335 0.0 673
MsG0480023821.01.T01 MTR_6g087120 70.536 336 96 1 13 348 16 348 0.0 511
MsG0480023821.01.T01 MTR_3g110185 67.378 328 95 3 24 348 503 821 7.30e-157 460
MsG0480023821.01.T01 MTR_2g023500 73.145 283 72 1 70 348 5 287 1.04e-155 438
MsG0480023821.01.T01 MTR_4g132270 70.290 276 78 1 77 348 6 281 2.02e-146 415
MsG0480023821.01.T01 MTR_4g132270 68.403 288 87 1 65 348 17 304 2.79e-146 415
MsG0480023821.01.T01 MTR_4g132260 69.203 276 81 1 77 348 6 281 7.83e-144 408
MsG0480023821.01.T01 MTR_4g039890 74.153 236 56 1 102 337 7 237 9.08e-129 369
MsG0480023821.01.T01 MTR_4g039890 43.478 184 92 5 26 205 60 235 3.16e-35 129
MsG0480023821.01.T01 MTR_0430s0010 54.762 84 38 0 166 249 1 84 3.33e-23 92.4
MsG0480023821.01.T01 MTR_4g057685 33.775 151 69 6 87 210 29 175 1.55e-17 80.1
MsG0480023821.01.T01 MTR_4g057685 33.775 151 69 6 87 210 77 223 1.96e-17 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023821.01.T01 AT1G67280 78.187 353 69 2 1 348 1 350 0.0 573
MsG0480023821.01.T01 AT1G67280 90.840 262 24 0 87 348 1 262 0.0 503
MsG0480023821.01.T01 AT1G11840 67.412 313 95 2 43 348 10 322 4.19e-153 433
MsG0480023821.01.T01 AT1G11840 71.986 282 75 1 71 348 2 283 3.95e-152 429
MsG0480023821.01.T01 AT1G11840 71.986 282 75 1 71 348 2 283 3.95e-152 429
MsG0480023821.01.T01 AT1G11840 71.986 282 75 1 71 348 2 283 3.95e-152 429
MsG0480023821.01.T01 AT1G11840 71.986 282 75 1 71 348 2 283 3.95e-152 429
MsG0480023821.01.T01 AT1G11840 71.493 221 63 0 71 291 2 222 7.23e-119 343
MsG0480023821.01.T01 AT1G11840 51.282 117 57 0 217 333 18 134 1.35e-34 127
MsG0480023821.01.T01 AT1G08110 30.405 148 76 4 87 209 28 173 9.32e-15 72.0
MsG0480023821.01.T01 AT1G08110 30.405 148 76 4 87 209 28 173 9.32e-15 72.0
MsG0480023821.01.T01 AT1G08110 30.405 148 76 4 87 209 28 173 9.32e-15 72.0
MsG0480023821.01.T01 AT1G08110 30.405 148 76 4 87 209 78 223 1.55e-14 72.8

Find 82 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGAGTAGAAGAGTATTT+AGG 0.260004 4:+90195613 MsG0480023821.01.T01:exon
TTGCCTGCCATTTAGGCTTT+TGG 0.265110 4:+90192974 MsG0480023821.01.T01:intron
CTGGAGTTGACTTACAATTA+TGG 0.281726 4:+90193271 MsG0480023821.01.T01:CDS
TGTAGATTATTCAGACAAAA+TGG 0.283756 4:+90191361 MsG0480023821.01.T01:CDS
TGGTTACAAATTTGAACTTT+TGG 0.294255 4:+90192788 MsG0480023821.01.T01:CDS
AAAATGAGAGAAAGAGATTC+GGG 0.301627 4:-90191158 None:intergenic
GGAACTGCATTTGGCCATTT+CGG 0.315598 4:+90192434 MsG0480023821.01.T01:CDS
AAGCTTTCAAGCCAAAACTA+TGG 0.324658 4:-90191339 None:intergenic
TATGATATTGGAACTGCATT+TGG 0.333699 4:+90192425 MsG0480023821.01.T01:CDS
GGAGTTGATAAATATGATAT+TGG 0.334496 4:+90192413 MsG0480023821.01.T01:CDS
CTATAGACATACCAATTCTT+TGG 0.335138 4:-90195682 None:intergenic
TCTCTGAAAGTGATGTCATC+TGG 0.362649 4:+90191388 MsG0480023821.01.T01:CDS
ATAACAAAATGTGAATCTTC+AGG 0.386635 4:-90191720 None:intergenic
GTTTCACAAACCCATAGTTT+TGG 0.387946 4:+90191328 MsG0480023821.01.T01:CDS
GCATTGGTATATCTTTCTTC+CGG 0.396583 4:-90191681 None:intergenic
CCCACTTTACAGATTGCAAT+AGG 0.402860 4:+90193553 MsG0480023821.01.T01:intron
GGAAATAGTACCTTGTTGTC+TGG 0.415086 4:-90193025 None:intergenic
GGAGTCACTGAATATGATAA+AGG 0.416787 4:+90193292 MsG0480023821.01.T01:CDS
ATCAGAAAATGTACTGGAAT+GGG 0.426693 4:+90191441 MsG0480023821.01.T01:CDS
TTGCCTCCTTTGACAGGACC+AGG 0.434438 4:-90192735 None:intergenic
ACCATAGCAATGCTTGGTTA+TGG 0.437587 4:+90193226 MsG0480023821.01.T01:CDS
TATCCACGGGAAAGCTTACT+CGG 0.440866 4:+90193614 MsG0480023821.01.T01:CDS
CGTGGATAGTTTAATCGCTT+CGG 0.444321 4:-90193599 None:intergenic
CGGGAACCTGGACCATTGCC+TGG 0.446245 4:+90193634 MsG0480023821.01.T01:CDS
TCAAACGTCTGCCAAAGAAT+TGG 0.446519 4:+90195671 MsG0480023821.01.T01:three_prime_UTR
AGTTCAAATTTGTAACCATC+AGG 0.449931 4:-90192783 None:intergenic
GGAAAGCTTACTCGGGAACC+TGG 0.467387 4:+90193622 MsG0480023821.01.T01:CDS
TGTTTATCGTGTTGGTGACT+TGG 0.472187 4:+90191495 MsG0480023821.01.T01:CDS
CTCTGAAAGTGATGTCATCT+GGG 0.476068 4:+90191389 MsG0480023821.01.T01:CDS
GCGATTGAAGAGAGAAAGAG+TGG 0.478044 4:-90191131 None:intergenic
GCTTAGAAAGCGCGACATAC+CGG 0.478155 4:+90191662 MsG0480023821.01.T01:CDS
ATCACTTGGCACAATGGCTC+GGG 0.479897 4:-90192825 None:intergenic
CTTCATGTTGTTTATCGTGT+TGG 0.480854 4:+90191487 MsG0480023821.01.T01:CDS
CATCAGAAAATGTACTGGAA+TGG 0.481686 4:+90191440 MsG0480023821.01.T01:CDS
TCTTCCATCCATCAGGATCC+AGG 0.482454 4:-90193681 None:intergenic
AGAAGATAAAACGACTGTTC+TGG 0.483579 4:+90193252 MsG0480023821.01.T01:CDS
CATCAACAGCAATACCGAAA+TGG 0.487202 4:-90192448 None:intergenic
TTGGCACAATGGCTCGGGAG+TGG 0.498981 4:-90192820 None:intergenic
AGCTTTCAAGCCAAAACTAT+GGG 0.500650 4:-90191338 None:intergenic
CATCACTTGGCACAATGGCT+CGG 0.503234 4:-90192826 None:intergenic
TGGCACAATGGCTCGGGAGT+GGG 0.512754 4:-90192819 None:intergenic
TTGATACCAGGCAATGGTCC+AGG 0.512839 4:-90193640 None:intergenic
GTGGAACTAATAAGAGCTAA+AGG 0.527668 4:+90192693 MsG0480023821.01.T01:CDS
CACCCACTCGAAGCATCACT+TGG 0.531180 4:-90192839 None:intergenic
TCCATATCCAAGAAAAGCAT+TGG 0.535638 4:-90191697 None:intergenic
TCTCATAAAATTCAATTGAA+CGG 0.539116 4:-90192869 None:intergenic
GAGTAGAAGAGTATTTAGGT+AGG 0.545659 4:+90195617 MsG0480023821.01.T01:exon
TAAAGGAAATGCTTATGCTC+AGG 0.546983 4:+90193309 MsG0480023821.01.T01:CDS
TGCTTCATCAGAAAATGTAC+TGG 0.554972 4:+90191435 MsG0480023821.01.T01:CDS
AGCACAAGAAAAGAAAGGAA+TGG 0.564875 4:-90190994 None:intergenic
CATACCGTCTTCCATCCATC+AGG 0.567411 4:-90193688 None:intergenic
TGAGGAGCACAAGAAAAGAA+AGG 0.570210 4:-90190999 None:intergenic
AGAGAGCCTGGTCCTGTCAA+AGG 0.574783 4:+90192729 MsG0480023821.01.T01:CDS
CGAAGCATCACTTGGCACAA+TGG 0.575077 4:-90192831 None:intergenic
CTCTCACCATAGCTTTGAGT+CGG 0.577829 4:-90191078 None:intergenic
GTATGGAGCTGCTTCGTACG+CGG 0.578040 4:+90192996 MsG0480023821.01.T01:CDS
CATGCCTGGATCCTGATGGA+TGG 0.578165 4:+90193677 MsG0480023821.01.T01:CDS
CAGTATACCATAGCAATGCT+TGG 0.579257 4:+90193220 MsG0480023821.01.T01:intron
ACCATAACCAAGCATTGCTA+TGG 0.580026 4:-90193227 None:intergenic
ACAAATGCTAGAACAGCGTA+GGG 0.590643 4:+90195778 MsG0480023821.01.T01:three_prime_UTR
TTCCCGAGTAAGCTTTCCCG+TGG 0.591304 4:-90193617 None:intergenic
CAGCTTCATTCCCAGACACT+CGG 0.599630 4:-90191640 None:intergenic
AACAAATGCTAGAACAGCGT+AGG 0.602642 4:+90195777 MsG0480023821.01.T01:three_prime_UTR
GCATTTGTTGAAGATCCTGA+TGG 0.602821 4:+90192768 MsG0480023821.01.T01:CDS
ACTGCATGCCTGGATCCTGA+TGG 0.602947 4:+90193673 MsG0480023821.01.T01:CDS
TGTGAAGTGTGAGTGAGTGA+AGG 0.603837 4:-90191048 None:intergenic
TTTGTGTTGATACCAGGCAA+TGG 0.616817 4:-90193646 None:intergenic
TCATCACCGACTCAAAGCTA+TGG 0.618570 4:+90191072 MsG0480023821.01.T01:exon
GAAGCGATTAAACTATCCAC+GGG 0.618591 4:+90193601 MsG0480023821.01.T01:CDS
TATGGAGCTGCTTCGTACGC+GGG 0.624392 4:+90192997 MsG0480023821.01.T01:CDS
CGAAGCGATTAAACTATCCA+CGG 0.624980 4:+90193600 MsG0480023821.01.T01:CDS
GGATCCTGATGGATGGAAGA+CGG 0.635393 4:+90193684 MsG0480023821.01.T01:CDS
GTGCCAAGTGATGCTTCGAG+TGG 0.647147 4:+90192836 MsG0480023821.01.T01:CDS
GAGCCTGGTCCTGTCAAAGG+AGG 0.647264 4:+90192732 MsG0480023821.01.T01:CDS
ATCCACGGGAAAGCTTACTC+GGG 0.647863 4:+90193615 MsG0480023821.01.T01:CDS
GAACTAATAAGAGCTAAAGG+TGG 0.648075 4:+90192696 MsG0480023821.01.T01:CDS
AGTGAGTGAAGGAAGTGTTG+TGG 0.653197 4:-90191037 None:intergenic
TGGATGATGAACTATGTATG+AGG 0.653626 4:-90191017 None:intergenic
CGATTGAAGAGAGAAAGAGT+GGG 0.656392 4:-90191130 None:intergenic
TGCCAAGTGATGCTTCGAGT+GGG 0.680292 4:+90192837 MsG0480023821.01.T01:CDS
GCGGGATAATCCAGACAACA+AGG 0.682899 4:+90193015 MsG0480023821.01.T01:CDS
AAATGAGAGAAAGAGATTCG+GGG 0.711378 4:-90191157 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTAATATTATGTATAAAT+AGG - Chr4:90194773-90194792 None:intergenic 10.0%
!! TCTTTATTATTTATCAAAAT+AGG - Chr4:90191841-90191860 None:intergenic 10.0%
!!! TCATATTCAATTTATTATTT+TGG + Chr4:90191549-90191568 MsG0480023821.01.T01:intron 10.0%
!! ATAAAATAAAAAATTAGTCC+AGG - Chr4:90191283-90191302 None:intergenic 15.0%
!!! AGATAATATTGATTTTCTAA+AGG + Chr4:90195589-90195608 MsG0480023821.01.T01:CDS 15.0%
!!! CTTTTACTTCATATTTTATT+TGG + Chr4:90194394-90194413 MsG0480023821.01.T01:intron 15.0%
!!! TTTACTTTGAAATCTTATTT+TGG + Chr4:90194940-90194959 MsG0480023821.01.T01:intron 15.0%
!!! TTTTTGTATATAAAAGAATG+AGG + Chr4:90193875-90193894 MsG0480023821.01.T01:intron 15.0%
!! AAAACATTAAATCAATTACG+TGG + Chr4:90192951-90192970 MsG0480023821.01.T01:intron 20.0%
!! AACCTTAAATTTGTCTAAAA+TGG - Chr4:90195400-90195419 None:intergenic 20.0%
!! AATAATTCTAACATCTTAAG+AGG - Chr4:90192301-90192320 None:intergenic 20.0%
!! ACTTAATTGTTTACTCAAAT+AGG - Chr4:90191801-90191820 None:intergenic 20.0%
!! CATTTAACAATATCAGATTA+CGG + Chr4:90192392-90192411 MsG0480023821.01.T01:intron 20.0%
!! TAAAATATGAAGTAAAAGCA+AGG - Chr4:90194392-90194411 None:intergenic 20.0%
!! TAAGCATTTCTATAGAAATA+AGG + Chr4:90191774-90191793 MsG0480023821.01.T01:intron 20.0%
!! TACAATGCTTATAAAAAAAG+TGG + Chr4:90195814-90195833 MsG0480023821.01.T01:three_prime_UTR 20.0%
!! TCTCATAAAATTCAATTGAA+CGG - Chr4:90192872-90192891 None:intergenic 20.0%
!! TGAAGAACTATAAACTTAAT+TGG + Chr4:90192208-90192227 MsG0480023821.01.T01:intron 20.0%
!! TTATTAGATTACAAAAACAG+TGG + Chr4:90192674-90192693 MsG0480023821.01.T01:intron 20.0%
!!! ATCCATTTTAGACAAATTTA+AGG + Chr4:90195395-90195414 MsG0480023821.01.T01:intron 20.0%
!!! ATTTTCTACAAAATCGAATT+TGG - Chr4:90195728-90195747 None:intergenic 20.0%
!!! CACTAGTTAAAAAATTTGTT+CGG + Chr4:90195124-90195143 MsG0480023821.01.T01:intron 20.0%
!!! CCAATTTATGGATTTTAAAA+AGG - Chr4:90195079-90195098 None:intergenic 20.0%
!!! CCTTTTTAAAATCCATAAAT+TGG + Chr4:90195076-90195095 MsG0480023821.01.T01:intron 20.0%
!!! CTTATTTTCATAAACTCTTT+AGG - Chr4:90191918-90191937 None:intergenic 20.0%
!!! TTCAATTGAATTTTATGAGA+AGG + Chr4:90192872-90192891 MsG0480023821.01.T01:CDS 20.0%
!!! TTCTGTTTTTGTCATTATTT+AGG + Chr4:90192590-90192609 MsG0480023821.01.T01:intron 20.0%
!!! TTTAATCTTCATTTTAGCAT+TGG - Chr4:90194906-90194925 None:intergenic 20.0%
! AAAAATGAACAAACAACAGA+AGG - Chr4:90195510-90195529 None:intergenic 25.0%
! AAAAATGAGAGAAAGAGATT+CGG - Chr4:90191162-90191181 None:intergenic 25.0%
! AAAATGAACAAACAACAGAA+GGG - Chr4:90195509-90195528 None:intergenic 25.0%
! AAAGCATATAAGGACAAAAT+CGG - Chr4:90194255-90194274 None:intergenic 25.0%
! AACACTCAAAATCCAATTTA+TGG - Chr4:90195091-90195110 None:intergenic 25.0%
! AACTACGGAAATAAATATTC+GGG - Chr4:90193484-90193503 None:intergenic 25.0%
! ATAAAAGAATGAGGATAACA+AGG + Chr4:90193884-90193903 MsG0480023821.01.T01:intron 25.0%
! ATAACAAAATGTGAATCTTC+AGG - Chr4:90191723-90191742 None:intergenic 25.0%
! ATACTAGTGATACTAAAGTT+TGG - Chr4:90192485-90192504 None:intergenic 25.0%
! ATATGGTATCAGAAACTTTA+TGG - Chr4:90193931-90193950 None:intergenic 25.0%
! CAGTGAAAAATACATAAAGT+AGG - Chr4:90193053-90193072 None:intergenic 25.0%
! GAAAAATACATAAAGTAGGT+GGG - Chr4:90193049-90193068 None:intergenic 25.0%
! GAACTACGGAAATAAATATT+CGG - Chr4:90193485-90193504 None:intergenic 25.0%
! GAATTTAGACTTTATGAAGT+AGG + Chr4:90192323-90192342 MsG0480023821.01.T01:intron 25.0%
! GGAAACATGAAAATAGATTA+AGG - Chr4:90194752-90194771 None:intergenic 25.0%
! TAAACTTAATTGGATTGAGA+AGG + Chr4:90192218-90192237 MsG0480023821.01.T01:intron 25.0%
! TACAAAAACTTTCAACATAC+AGG - Chr4:90193863-90193882 None:intergenic 25.0%
! TAGTACTTCTATTTGTCAAT+TGG + Chr4:90195473-90195492 MsG0480023821.01.T01:intron 25.0%
! TAGTTGTATTTGTATATGAC+AGG - Chr4:90194713-90194732 None:intergenic 25.0%
! TGAAAAATACATAAAGTAGG+TGG - Chr4:90193050-90193069 None:intergenic 25.0%
! TGATTATTGTGAATACCATA+AGG - Chr4:90194968-90194987 None:intergenic 25.0%
! TGTAGATTATTCAGACAAAA+TGG + Chr4:90191361-90191380 MsG0480023821.01.T01:CDS 25.0%
!! AAATATCTTTTGCAAGTCTT+AGG + Chr4:90193118-90193137 MsG0480023821.01.T01:intron 25.0%
!! TGGTTACAAATTTGAACTTT+TGG + Chr4:90192788-90192807 MsG0480023821.01.T01:CDS 25.0%
!! TTGTCTAAAATGGATCAATA+TGG - Chr4:90195390-90195409 None:intergenic 25.0%
!! TTTGTGTTCTTTTGATGTAT+TGG + Chr4:90193089-90193108 MsG0480023821.01.T01:intron 25.0%
!! TTTTGTCCTTATATGCTTTT+CGG + Chr4:90194256-90194275 MsG0480023821.01.T01:intron 25.0%
!!! AAATTTGAACTTTTGGAAAG+AGG + Chr4:90192795-90192814 MsG0480023821.01.T01:CDS 25.0%
!!! AATCTTATTTTGGTACCTTA+TGG + Chr4:90194950-90194969 MsG0480023821.01.T01:intron 25.0%
!!! ATTTAGGATTTTCTTTCCAT+TGG + Chr4:90192606-90192625 MsG0480023821.01.T01:intron 25.0%
!!! GGAGTTGATAAATATGATAT+TGG + Chr4:90192413-90192432 MsG0480023821.01.T01:CDS 25.0%
!!! TATTGATTTTCTAAAGGAGT+TGG + Chr4:90195595-90195614 MsG0480023821.01.T01:CDS 25.0%
!!! TTTTAAAAAGGAAGCGATAA+TGG - Chr4:90195067-90195086 None:intergenic 25.0%
AAAAGCCATAACATGAAAGA+AGG - Chr4:90193195-90193214 None:intergenic 30.0%
AAAAGTTCAGATCATAACCA+CGG - Chr4:90193402-90193421 None:intergenic 30.0%
AAAATCGGTATTCCACAAAA+TGG - Chr4:90194240-90194259 None:intergenic 30.0%
AAAATGAGAGAAAGAGATTC+GGG - Chr4:90191161-90191180 None:intergenic 30.0%
AAAGAAGAACAAGAGAAAAG+AGG - Chr4:90193347-90193366 None:intergenic 30.0%
AAATCGGTATTCCACAAAAT+GGG - Chr4:90194239-90194258 None:intergenic 30.0%
AAGAAACCATCTTCAAATAG+AGG - Chr4:90193512-90193531 None:intergenic 30.0%
ACTACGGAAATAAATATTCG+GGG - Chr4:90193483-90193502 None:intergenic 30.0%
AGAATTGAAAAACTAGCGAT+GGG - Chr4:90191109-90191128 None:intergenic 30.0%
AGTTCAAATTTGTAACCATC+AGG - Chr4:90192786-90192805 None:intergenic 30.0%
ATCAGAAAATGTACTGGAAT+GGG + Chr4:90191441-90191460 MsG0480023821.01.T01:CDS 30.0%
ATGGCGACTTGTAAAAAAAT+TGG - Chr4:90195165-90195184 None:intergenic 30.0%
ATTCACTCAAACGTTTAACA+TGG + Chr4:90193747-90193766 MsG0480023821.01.T01:intron 30.0%
CAAAAGAACACAAAAGCAAA+AGG - Chr4:90193083-90193102 None:intergenic 30.0%
CGTACAAAACAAACGAATAA+TGG - Chr4:90195184-90195203 None:intergenic 30.0%
CTATAGACATACCAATTCTT+TGG - Chr4:90195685-90195704 None:intergenic 30.0%
GAAATGATAAAGAAAGAGAC+TGG - Chr4:90194689-90194708 None:intergenic 30.0%
GATCTTAGAATTTGGACTTT+AGG - Chr4:90194027-90194046 None:intergenic 30.0%
GGATCAAACTGTTAACTATT+TGG + Chr4:90193905-90193924 MsG0480023821.01.T01:intron 30.0%
TAACAAGACCAATATGGATA+CGG - Chr4:90195032-90195051 None:intergenic 30.0%
TACATATAGTCGTTTAGTGT+GGG + Chr4:90194187-90194206 MsG0480023821.01.T01:intron 30.0%
TAGAATTGAAAAACTAGCGA+TGG - Chr4:90191110-90191129 None:intergenic 30.0%
TATGATATTGGAACTGCATT+TGG + Chr4:90192425-90192444 MsG0480023821.01.T01:CDS 30.0%
TATTGAACTCACATACAGTA+AGG + Chr4:90191740-90191759 MsG0480023821.01.T01:intron 30.0%
TCAAACGTTTAACATGGAAA+GGG + Chr4:90193753-90193772 MsG0480023821.01.T01:intron 30.0%
TCAAAGTTATATACCAAACC+TGG - Chr4:90192063-90192082 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG + Chr4:90192023-90192042 MsG0480023821.01.T01:intron 30.0%
TCAGATACGATCTTAGAATT+TGG - Chr4:90194035-90194054 None:intergenic 30.0%
TCATCATGAGAAGTAAAGAA+AGG - Chr4:90191230-90191249 None:intergenic 30.0%
TGGCGACTTGTAAAAAAATT+GGG - Chr4:90195164-90195183 None:intergenic 30.0%
TGTATGTAACAAGACCAATA+TGG - Chr4:90195038-90195057 None:intergenic 30.0%
TTTAGCATTTAGTACCTGTT+TGG - Chr4:90192040-90192059 None:intergenic 30.0%
! AAAACCTGAACATTTGAGAT+TGG - Chr4:90195566-90195585 None:intergenic 30.0%
! AGATATACCAATGCTTTTCT+TGG + Chr4:90191690-90191709 MsG0480023821.01.T01:CDS 30.0%
! TTGAATTTTATGAGAAGGTG+AGG + Chr4:90192877-90192896 MsG0480023821.01.T01:intron 30.0%
! TTTTCCAATCTCAAATGTTC+AGG + Chr4:90195559-90195578 MsG0480023821.01.T01:intron 30.0%
!! GAGTCACTTTAAAGTAATGA+TGG - Chr4:90194354-90194373 None:intergenic 30.0%
!! GATTAGGAGTGTCTTTAATA+TGG - Chr4:90193948-90193967 None:intergenic 30.0%
!! GTAATTTTTGTGTTGATACC+AGG - Chr4:90193655-90193674 None:intergenic 30.0%
!!! AATTTTTTAACTAGTGCGCT+TGG - Chr4:90195120-90195139 None:intergenic 30.0%
!!! ACATGTATACTTTTTTCTCC+TGG + Chr4:90191262-90191281 MsG0480023821.01.T01:intron 30.0%
!!! TTAGCTTTTGAGGTTGATTT+AGG + Chr4:90194001-90194020 MsG0480023821.01.T01:intron 30.0%
AAAAGCTAACTCAAAAGACG+AGG - Chr4:90193990-90194009 None:intergenic 35.0%
AAATGAGAGAAAGAGATTCG+GGG - Chr4:90191160-90191179 None:intergenic 35.0%
AACATAAGCACTTGTGAGAA+TGG - Chr4:90191992-90192011 None:intergenic 35.0%
AACGACTATATGTACCTAGA+AGG - Chr4:90194181-90194200 None:intergenic 35.0%
AAGCTTTCAAGCCAAAACTA+TGG - Chr4:90191342-90191361 None:intergenic 35.0%
ACACACCAAAGTAAACAGAA+GGG - Chr4:90195228-90195247 None:intergenic 35.0%
ACCTATTGCAATCTGTAAAG+TGG - Chr4:90193557-90193576 None:intergenic 35.0%
ACTAAATGCTAAACCAGGTT+TGG + Chr4:90192047-90192066 MsG0480023821.01.T01:intron 35.0%
AGAAGATAAAACGACTGTTC+TGG + Chr4:90193252-90193271 MsG0480023821.01.T01:CDS 35.0%
AGCTTTCAAGCCAAAACTAT+GGG - Chr4:90191341-90191360 None:intergenic 35.0%
ATGAAGAGGAGATAGATGAA+AGG - Chr4:90194505-90194524 None:intergenic 35.0%
ATTAAAACAAGTCTCGCTCT+TGG - Chr4:90194474-90194493 None:intergenic 35.0%
CATCAGAAAATGTACTGGAA+TGG + Chr4:90191440-90191459 MsG0480023821.01.T01:CDS 35.0%
CCTATTGCAATCTGTAAAGT+GGG - Chr4:90193556-90193575 None:intergenic 35.0%
CTATTGCAATCTGTAAAGTG+GGG - Chr4:90193555-90193574 None:intergenic 35.0%
CTCAAACGTTTAACATGGAA+AGG + Chr4:90193752-90193771 MsG0480023821.01.T01:intron 35.0%
GAACTAATAAGAGCTAAAGG+TGG + Chr4:90192696-90192715 MsG0480023821.01.T01:CDS 35.0%
GCCAGTTACTTAAACAGTTA+GGG - Chr4:90194811-90194830 None:intergenic 35.0%
GGAGTCACTGAATATGATAA+AGG + Chr4:90193292-90193311 MsG0480023821.01.T01:CDS 35.0%
GGGAATTGATATCAATGAAG+AGG - Chr4:90194519-90194538 None:intergenic 35.0%
GGTATGCTTCTAGACTTAAT+TGG - Chr4:90194218-90194237 None:intergenic 35.0%
GTACATATAGTCGTTTAGTG+TGG + Chr4:90194186-90194205 MsG0480023821.01.T01:intron 35.0%
GTGGAACTAATAAGAGCTAA+AGG + Chr4:90192693-90192712 MsG0480023821.01.T01:CDS 35.0%
GTGTGTGTTCTTATGTAAGA+TGG - Chr4:90195256-90195275 None:intergenic 35.0%
TAAAGGAAATGCTTATGCTC+AGG + Chr4:90193309-90193328 MsG0480023821.01.T01:CDS 35.0%
TCAAAACCCATAGGTCAATT+TGG - Chr4:90192265-90192284 None:intergenic 35.0%
TCAACATAGTCAAAACCCAT+AGG - Chr4:90192274-90192293 None:intergenic 35.0%
TCCCTAACTGTTTAAGTAAC+TGG + Chr4:90194807-90194826 MsG0480023821.01.T01:intron 35.0%
TGAAGAGGAGATAGATGAAA+GGG - Chr4:90194504-90194523 None:intergenic 35.0%
TGCGATAGTGTCAGTATAAA+GGG - Chr4:90194853-90194872 None:intergenic 35.0%
TGCTTCATCAGAAAATGTAC+TGG + Chr4:90191435-90191454 MsG0480023821.01.T01:CDS 35.0%
TGGATGATGAACTATGTATG+AGG - Chr4:90191020-90191039 None:intergenic 35.0%
TTAAAACAAGTCTCGCTCTT+GGG - Chr4:90194473-90194492 None:intergenic 35.0%
TTCGATTGAATCTTGTGAAG+AGG + Chr4:90193367-90193386 MsG0480023821.01.T01:intron 35.0%
TTGCGATAGTGTCAGTATAA+AGG - Chr4:90194854-90194873 None:intergenic 35.0%
! ACCAATGCTTTTCTTGGATA+TGG + Chr4:90191696-90191715 MsG0480023821.01.T01:CDS 35.0%
! AGATTTTATACCGAGTGTCT+GGG + Chr4:90191630-90191649 MsG0480023821.01.T01:intron 35.0%
! CATGAATAAGTTGAGAGAGA+GGG - Chr4:90191200-90191219 None:intergenic 35.0%
! CTGGAGTTGACTTACAATTA+TGG + Chr4:90193271-90193290 MsG0480023821.01.T01:CDS 35.0%
! CTTCATGTTGTTTATCGTGT+TGG + Chr4:90191487-90191506 MsG0480023821.01.T01:CDS 35.0%
! GAGGAGTTGTCTGATTTTAA+TGG - Chr4:90194442-90194461 None:intergenic 35.0%
! GCATTGGTATATCTTTCTTC+CGG - Chr4:90191684-90191703 None:intergenic 35.0%
! GTTTCACAAACCCATAGTTT+TGG + Chr4:90191328-90191347 MsG0480023821.01.T01:CDS 35.0%
! TAATGATGGAGAGACAGTTT+AGG - Chr4:90194340-90194359 None:intergenic 35.0%
! TCATGAATAAGTTGAGAGAG+AGG - Chr4:90191201-90191220 None:intergenic 35.0%
! TCCATATCCAAGAAAAGCAT+TGG - Chr4:90191700-90191719 None:intergenic 35.0%
! TCTTTTGCCTTTTGACACTT+TGG + Chr4:90193154-90193173 MsG0480023821.01.T01:intron 35.0%
!! AGAACAGTCGTTTTATCTTC+TGG - Chr4:90193253-90193272 None:intergenic 35.0%
!! GAGTAGAAGAGTATTTAGGT+AGG + Chr4:90195617-90195636 MsG0480023821.01.T01:exon 35.0%
!! GTTGGAGTAGAAGAGTATTT+AGG + Chr4:90195613-90195632 MsG0480023821.01.T01:exon 35.0%
!! TCTTTCTCTCATTTTTCCAC+CGG + Chr4:90191166-90191185 MsG0480023821.01.T01:CDS 35.0%
!!! GTCTTTTGAGTTAGCTTTTG+AGG + Chr4:90193991-90194010 MsG0480023821.01.T01:intron 35.0%
AAAGAAAGAGACTGGTGACA+GGG - Chr4:90194681-90194700 None:intergenic 40.0%
AACAAATGCTAGAACAGCGT+AGG + Chr4:90195777-90195796 MsG0480023821.01.T01:three_prime_UTR 40.0%
ACAAATGCTAGAACAGCGTA+GGG + Chr4:90195778-90195797 MsG0480023821.01.T01:three_prime_UTR 40.0%
ACATGAAAGAAGGTAGGCAA+AGG - Chr4:90193185-90193204 None:intergenic 40.0%
ACCATAGCAATGCTTGGTTA+TGG + Chr4:90193226-90193245 MsG0480023821.01.T01:CDS 40.0%
ACCATCTTCAAATAGAGGCA+AGG - Chr4:90193507-90193526 None:intergenic 40.0%
ACCCATAGGTCAATTTGGAT+TGG - Chr4:90192260-90192279 None:intergenic 40.0%
ACGTTTAACATGGAAAGGGA+AGG + Chr4:90193757-90193776 MsG0480023821.01.T01:intron 40.0%
ACTTGGAGCATGGACAAATA+AGG - Chr4:90194086-90194105 None:intergenic 40.0%
AGACACTCCTAATCCTTGTT+AGG + Chr4:90193954-90193973 MsG0480023821.01.T01:intron 40.0%
AGCCAATCCAAATTGACCTA+TGG + Chr4:90192255-90192274 MsG0480023821.01.T01:intron 40.0%
AGGAGAGAACTAGAATGAAG+TGG - Chr4:90194320-90194339 None:intergenic 40.0%
AGGGGAATAATTTCCTTCGT+TGG - Chr4:90194662-90194681 None:intergenic 40.0%
ATACCAAAAGCCTAAATGGC+AGG - Chr4:90192980-90192999 None:intergenic 40.0%
ATGGAAGACACATGTTGAGT+TGG - Chr4:90194423-90194442 None:intergenic 40.0%
CAAATAGAGGCAAGGAACTA+CGG - Chr4:90193499-90193518 None:intergenic 40.0%
CAAGTTTGACCTCAGAATAG+CGG + Chr4:90194633-90194652 MsG0480023821.01.T01:intron 40.0%
CACAAAAATTACTGCATGCC+TGG + Chr4:90193663-90193682 MsG0480023821.01.T01:CDS 40.0%
CACACACCAAAGTAAACAGA+AGG - Chr4:90195229-90195248 None:intergenic 40.0%
CAGCATCCATGTTTGTCAAA+AGG - Chr4:90192632-90192651 None:intergenic 40.0%
CAGGTACTAAATGCTAAACC+AGG + Chr4:90192042-90192061 MsG0480023821.01.T01:intron 40.0%
CAGTATACCATAGCAATGCT+TGG + Chr4:90193220-90193239 MsG0480023821.01.T01:intron 40.0%
CATCAACAGCAATACCGAAA+TGG - Chr4:90192451-90192470 None:intergenic 40.0%
CATGAGTTGTTGAAGAGTCA+GGG - Chr4:90194539-90194558 None:intergenic 40.0%
CATGTTTGTCAAAAGGCCAA+TGG - Chr4:90192625-90192644 None:intergenic 40.0%
CCAATATGGATACGGTGATA+TGG - Chr4:90195024-90195043 None:intergenic 40.0%
CCATATCACCGTATCCATAT+TGG + Chr4:90195021-90195040 MsG0480023821.01.T01:intron 40.0%
CCCACTTTACAGATTGCAAT+AGG + Chr4:90193553-90193572 MsG0480023821.01.T01:intron 40.0%
CGAAGCGATTAAACTATCCA+CGG + Chr4:90193600-90193619 MsG0480023821.01.T01:CDS 40.0%
CGATTGAAGAGAGAAAGAGT+GGG - Chr4:90191133-90191152 None:intergenic 40.0%
CGTGGATAGTTTAATCGCTT+CGG - Chr4:90193602-90193621 None:intergenic 40.0%
CTCCATACCAAAAGCCTAAA+TGG - Chr4:90192984-90193003 None:intergenic 40.0%
CTTGGAGCATGGACAAATAA+GGG - Chr4:90194085-90194104 None:intergenic 40.0%
GAAGCGATTAAACTATCCAC+GGG + Chr4:90193601-90193620 MsG0480023821.01.T01:CDS 40.0%
GCCAATCCAAATTGACCTAT+GGG + Chr4:90192256-90192275 MsG0480023821.01.T01:intron 40.0%
GCCATAACATGAAAGAAGGT+AGG - Chr4:90193191-90193210 None:intergenic 40.0%
GCCTACCTTCTTTCATGTTA+TGG + Chr4:90193187-90193206 MsG0480023821.01.T01:intron 40.0%
GGAAAAATAACTAGAGAGCC+TGG + Chr4:90192717-90192736 MsG0480023821.01.T01:CDS 40.0%
GGCCAGTTACTTAAACAGTT+AGG - Chr4:90194812-90194831 None:intergenic 40.0%
GGGGAATAATTTCCTTCGTT+GGG - Chr4:90194661-90194680 None:intergenic 40.0%
TAAAGAAAGAGACTGGTGAC+AGG - Chr4:90194682-90194701 None:intergenic 40.0%
TAGAATGAAGTGGAGCTTAC+AGG - Chr4:90194310-90194329 None:intergenic 40.0%
TCAAACGTCTGCCAAAGAAT+TGG + Chr4:90195671-90195690 MsG0480023821.01.T01:three_prime_UTR 40.0%
TCCATTCTAGATCTGCTCTT+AGG + Chr4:90194056-90194075 MsG0480023821.01.T01:intron 40.0%
TCCTTGCCTCTATTTGAAGA+TGG + Chr4:90193503-90193522 MsG0480023821.01.T01:intron 40.0%
TGTGTTCATTCCTGTTGAGT+TGG + Chr4:90192533-90192552 MsG0480023821.01.T01:intron 40.0%
! ACCATAACCAAGCATTGCTA+TGG - Chr4:90193230-90193249 None:intergenic 40.0%
! CAGATTTTATACCGAGTGTC+TGG + Chr4:90191629-90191648 MsG0480023821.01.T01:intron 40.0%
! CTCTGAAAGTGATGTCATCT+GGG + Chr4:90191389-90191408 MsG0480023821.01.T01:CDS 40.0%
! CTTTTGACAAACATGGATGC+TGG + Chr4:90192630-90192649 MsG0480023821.01.T01:intron 40.0%
! GAGTAGCCGAAAAGCATATA+AGG - Chr4:90194265-90194284 None:intergenic 40.0%
! GCATTTGTTGAAGATCCTGA+TGG + Chr4:90192768-90192787 MsG0480023821.01.T01:CDS 40.0%
! GGAAATAGTACCTTGTTGTC+TGG - Chr4:90193028-90193047 None:intergenic 40.0%
! TCTCTGAAAGTGATGTCATC+TGG + Chr4:90191388-90191407 MsG0480023821.01.T01:CDS 40.0%
! TGAGGAGCACAAGAAAAGAA+AGG - Chr4:90191002-90191021 None:intergenic 40.0%
! TTTGTGTTGATACCAGGCAA+TGG - Chr4:90193649-90193668 None:intergenic 40.0%
!! CTAGAAGCATACCCATTTTG+TGG + Chr4:90194225-90194244 MsG0480023821.01.T01:intron 40.0%
!! TGCCATTTAGGCTTTTGGTA+TGG + Chr4:90192979-90192998 MsG0480023821.01.T01:intron 40.0%
!! TGTTTATCGTGTTGGTGACT+TGG + Chr4:90191495-90191514 MsG0480023821.01.T01:CDS 40.0%
!!! CATTGGCCTTTTGACAAACA+TGG + Chr4:90192623-90192642 MsG0480023821.01.T01:intron 40.0%
AAAAGCAAGGACAACCTGAG+AGG - Chr4:90194379-90194398 None:intergenic 45.0%
AACAGATCACCACATGCAAG+AGG + Chr4:90193801-90193820 MsG0480023821.01.T01:intron 45.0%
AAGAAAGAGACTGGTGACAG+GGG - Chr4:90194680-90194699 None:intergenic 45.0%
AGCATGAGCTGACACAGAAT+AGG - Chr4:90192909-90192928 None:intergenic 45.0%
AGGAATGAACACAGCATGAG+AGG - Chr4:90192526-90192545 None:intergenic 45.0%
ATAGTCGTTTAGTGTGGGCT+TGG + Chr4:90194192-90194211 MsG0480023821.01.T01:intron 45.0%
ATCCTCAATCTCACATGGTG+TGG + Chr4:90192564-90192583 MsG0480023821.01.T01:intron 45.0%
ATGCCAAGCTGCTTGCTTAA+AGG - Chr4:90194119-90194138 None:intergenic 45.0%
ATTTGTCCATGCTCCAAGTG+TGG + Chr4:90194087-90194106 MsG0480023821.01.T01:intron 45.0%
CAACCTGCTTCATGATCTCA+GGG + Chr4:90194589-90194608 MsG0480023821.01.T01:intron 45.0%
CACCAAAGTAAACAGAAGGG+AGG - Chr4:90195225-90195244 None:intergenic 45.0%
CCATGTGAGATTGAGGATCA+AGG - Chr4:90192562-90192581 None:intergenic 45.0%
CCTTGATCCTCAATCTCACA+TGG + Chr4:90192559-90192578 MsG0480023821.01.T01:intron 45.0%
CTTGCATGTGGTGATCTGTT+AGG - Chr4:90193801-90193820 None:intergenic 45.0%
GAACTCTATACGAGCCTTCT+AGG + Chr4:90194164-90194183 MsG0480023821.01.T01:intron 45.0%
GAGAGAGAGGGAGAAATTAC+CGG - Chr4:90191188-90191207 None:intergenic 45.0%
GCATGAGTTGTTGAAGAGTC+AGG - Chr4:90194540-90194559 None:intergenic 45.0%
GCCTAAGAGCAGATCTAGAA+TGG - Chr4:90194060-90194079 None:intergenic 45.0%
GCGATTGAAGAGAGAAAGAG+TGG - Chr4:90191134-90191153 None:intergenic 45.0%
GCTCAAGCCTAACAAGGATT+AGG - Chr4:90193964-90193983 None:intergenic 45.0%
GGAACTGCATTTGGCCATTT+CGG + Chr4:90192434-90192453 MsG0480023821.01.T01:CDS 45.0%
TATCCACGGGAAAGCTTACT+CGG + Chr4:90193614-90193633 MsG0480023821.01.T01:CDS 45.0%
TCAACCTGCTTCATGATCTC+AGG + Chr4:90194588-90194607 MsG0480023821.01.T01:intron 45.0%
TGCCAAGCTGCTTGCTTAAA+GGG - Chr4:90194118-90194137 None:intergenic 45.0%
TGTGAAGTGTGAGTGAGTGA+AGG - Chr4:90191051-90191070 None:intergenic 45.0%
TTAAAGTGACTCCTCCTCTC+AGG + Chr4:90194362-90194381 MsG0480023821.01.T01:intron 45.0%
TTACCCTGAGATCATGAAGC+AGG - Chr4:90194595-90194614 None:intergenic 45.0%
TTTGTCCATGCTCCAAGTGT+GGG + Chr4:90194088-90194107 MsG0480023821.01.T01:intron 45.0%
! ACTGTTTTGCCTCCTTTGAC+AGG - Chr4:90192744-90192763 None:intergenic 45.0%
! ATGCTTTTCGGCTACTCCAT+TGG + Chr4:90194268-90194287 MsG0480023821.01.T01:intron 45.0%
! GAGATCATGAAGCAGGTTGA+TGG - Chr4:90194588-90194607 None:intergenic 45.0%
! GGACATGCCAAAGTGTCAAA+AGG - Chr4:90193164-90193183 None:intergenic 45.0%
! TGAAGAGGTTTTCATTGCCG+TGG + Chr4:90193382-90193401 MsG0480023821.01.T01:intron 45.0%
!! AGTGAGTGAAGGAAGTGTTG+TGG - Chr4:90191040-90191059 None:intergenic 45.0%
!! CTCTCACCATAGCTTTGAGT+CGG - Chr4:90191081-90191100 None:intergenic 45.0%
!! GTTCATTCCTGTTGAGTTGG+TGG + Chr4:90192536-90192555 MsG0480023821.01.T01:intron 45.0%
!! TAACCTGACGAGTCTTGTTG+AGG + Chr4:90194142-90194161 MsG0480023821.01.T01:intron 45.0%
!! TCATCACCGACTCAAAGCTA+TGG + Chr4:90191072-90191091 MsG0480023821.01.T01:exon 45.0%
!! TTGCCTGCCATTTAGGCTTT+TGG + Chr4:90192974-90192993 MsG0480023821.01.T01:intron 45.0%
AGAGAGGGAGAAATTACCGG+TGG - Chr4:90191185-90191204 None:intergenic 50.0%
AGGACTGCTCAAGCCTAACA+AGG - Chr4:90193970-90193989 None:intergenic 50.0%
ATCAAGGCCACCAACTCAAC+AGG - Chr4:90192546-90192565 None:intergenic 50.0%
ATCACTTGGCACAATGGCTC+GGG - Chr4:90192828-90192847 None:intergenic 50.0%
ATCCACGGGAAAGCTTACTC+GGG + Chr4:90193615-90193634 MsG0480023821.01.T01:CDS 50.0%
CAGCTTCATTCCCAGACACT+CGG - Chr4:90191643-90191662 None:intergenic 50.0%
CATACCGTCTTCCATCCATC+AGG - Chr4:90193691-90193710 None:intergenic 50.0%
CATCACTTGGCACAATGGCT+CGG - Chr4:90192829-90192848 None:intergenic 50.0%
CCACATGCAAGAGGTTGTTG+AGG + Chr4:90193810-90193829 MsG0480023821.01.T01:intron 50.0%
CCTCAACAACCTCTTGCATG+TGG - Chr4:90193813-90193832 None:intergenic 50.0%
CGCCTCCCTTCTGTTTACTT+TGG + Chr4:90195220-90195239 MsG0480023821.01.T01:intron 50.0%
CTCAATCTCACATGGTGTGG+AGG + Chr4:90192567-90192586 MsG0480023821.01.T01:intron 50.0%
CTCAGGGTAACTGTAGTTCC+AGG + Chr4:90194605-90194624 MsG0480023821.01.T01:intron 50.0%
CTCCACACCATGTGAGATTG+AGG - Chr4:90192569-90192588 None:intergenic 50.0%
GAGGTCAAACTTGTGACTCC+TGG - Chr4:90194626-90194645 None:intergenic 50.0%
GCGGGATAATCCAGACAACA+AGG + Chr4:90193015-90193034 MsG0480023821.01.T01:CDS 50.0%
GCTTACAGGTAGAAGCAACG+TGG - Chr4:90194296-90194315 None:intergenic 50.0%
GGAAAGGGAAGGCTTGTGAA+TGG + Chr4:90193768-90193787 MsG0480023821.01.T01:intron 50.0%
GTTCCTCAACAAGACTCGTC+AGG - Chr4:90194148-90194167 None:intergenic 50.0%
TAGAAGCAACGTGGAGCCAA+TGG - Chr4:90194287-90194306 None:intergenic 50.0%
TCTTCCATCCATCAGGATCC+AGG - Chr4:90193684-90193703 None:intergenic 50.0%
TGCCAAGTGATGCTTCGAGT+GGG + Chr4:90192837-90192856 MsG0480023821.01.T01:CDS 50.0%
TGCCCTTTAAGCAAGCAGCT+TGG + Chr4:90194113-90194132 MsG0480023821.01.T01:intron 50.0%
TTAAAGGGCAAGCCCACACT+TGG - Chr4:90194103-90194122 None:intergenic 50.0%
TTGATACCAGGCAATGGTCC+AGG - Chr4:90193643-90193662 None:intergenic 50.0%
! AGAATAGCGGAACCCAACGA+AGG + Chr4:90194646-90194665 MsG0480023821.01.T01:intron 50.0%
! CGAAGCATCACTTGGCACAA+TGG - Chr4:90192834-90192853 None:intergenic 50.0%
! GCTTAGAAAGCGCGACATAC+CGG + Chr4:90191662-90191681 MsG0480023821.01.T01:CDS 50.0%
! GGATCCTGATGGATGGAAGA+CGG + Chr4:90193684-90193703 MsG0480023821.01.T01:CDS 50.0%
! TACGTGGTTGCCTGCCATTT+AGG + Chr4:90192967-90192986 MsG0480023821.01.T01:intron 50.0%
ACTGCATGCCTGGATCCTGA+TGG + Chr4:90193673-90193692 MsG0480023821.01.T01:CDS 55.0%
AGAGAGCCTGGTCCTGTCAA+AGG + Chr4:90192729-90192748 MsG0480023821.01.T01:CDS 55.0%
AGCAAGGACAACCTGAGAGG+AGG - Chr4:90194376-90194395 None:intergenic 55.0%
CATGCCTGGATCCTGATGGA+TGG + Chr4:90193677-90193696 MsG0480023821.01.T01:CDS 55.0%
CGTTGGGTTCCGCTATTCTG+AGG - Chr4:90194645-90194664 None:intergenic 55.0%
GGAAAGCTTACTCGGGAACC+TGG + Chr4:90193622-90193641 MsG0480023821.01.T01:CDS 55.0%
GGGAAGAGCGACAGATAGAG+AGG - Chr4:90194833-90194852 None:intergenic 55.0%
GTATGGAGCTGCTTCGTACG+CGG + Chr4:90192996-90193015 MsG0480023821.01.T01:CDS 55.0%
GTGCCAAGTGATGCTTCGAG+TGG + Chr4:90192836-90192855 MsG0480023821.01.T01:CDS 55.0%
TATGGAGCTGCTTCGTACGC+GGG + Chr4:90192997-90193016 MsG0480023821.01.T01:CDS 55.0%
TTCCCGAGTAAGCTTTCCCG+TGG - Chr4:90193620-90193639 None:intergenic 55.0%
TTGCCTCCTTTGACAGGACC+AGG - Chr4:90192738-90192757 None:intergenic 55.0%
! CACCCACTCGAAGCATCACT+TGG - Chr4:90192842-90192861 None:intergenic 55.0%
GAGCCTGGTCCTGTCAAAGG+AGG + Chr4:90192732-90192751 MsG0480023821.01.T01:CDS 60.0%
GCAAGCCCACACTTGGAGCA+TGG - Chr4:90194096-90194115 None:intergenic 60.0%
GTCTCGCTCTTGGGTGACGA+TGG - Chr4:90194464-90194483 None:intergenic 60.0%
TCGCTCTTGGGTGACGATGG+AGG - Chr4:90194461-90194480 None:intergenic 60.0%
! TGGCACAATGGCTCGGGAGT+GGG - Chr4:90192822-90192841 None:intergenic 60.0%
! TTGGCACAATGGCTCGGGAG+TGG - Chr4:90192823-90192842 None:intergenic 60.0%
CGGGAACCTGGACCATTGCC+TGG + Chr4:90193634-90193653 MsG0480023821.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 90190996 90195869 90190996 ID=MsG0480023821.01;Name=MsG0480023821.01
Chr4 mRNA 90190996 90195869 90190996 ID=MsG0480023821.01.T01;Parent=MsG0480023821.01;Name=MsG0480023821.01.T01;_AED=0.43;_eAED=0.43;_QI=95|1|1|1|0.87|0.77|9|247|348
Chr4 exon 90190996 90191187 90190996 ID=MsG0480023821.01.T01:exon:3970;Parent=MsG0480023821.01.T01
Chr4 exon 90191323 90191530 90191323 ID=MsG0480023821.01.T01:exon:3971;Parent=MsG0480023821.01.T01
Chr4 exon 90191632 90191756 90191632 ID=MsG0480023821.01.T01:exon:3972;Parent=MsG0480023821.01.T01
Chr4 exon 90192408 90192472 90192408 ID=MsG0480023821.01.T01:exon:3973;Parent=MsG0480023821.01.T01
Chr4 exon 90192681 90192893 90192681 ID=MsG0480023821.01.T01:exon:3974;Parent=MsG0480023821.01.T01
Chr4 exon 90192989 90193036 90192989 ID=MsG0480023821.01.T01:exon:3975;Parent=MsG0480023821.01.T01
Chr4 exon 90193223 90193330 90193223 ID=MsG0480023821.01.T01:exon:3976;Parent=MsG0480023821.01.T01
Chr4 exon 90193565 90193705 90193565 ID=MsG0480023821.01.T01:exon:3977;Parent=MsG0480023821.01.T01
Chr4 exon 90195581 90195869 90195581 ID=MsG0480023821.01.T01:exon:3978;Parent=MsG0480023821.01.T01
Chr4 five_prime_UTR 90190996 90191090 90190996 ID=MsG0480023821.01.T01:five_prime_utr;Parent=MsG0480023821.01.T01
Chr4 CDS 90191091 90191187 90191091 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90191323 90191530 90191323 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90191632 90191756 90191632 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90192408 90192472 90192408 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90192681 90192893 90192681 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90192989 90193036 90192989 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90193223 90193330 90193223 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90193565 90193705 90193565 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 CDS 90195581 90195622 90195581 ID=MsG0480023821.01.T01:cds;Parent=MsG0480023821.01.T01
Chr4 three_prime_UTR 90195623 90195869 90195623 ID=MsG0480023821.01.T01:three_prime_utr;Parent=MsG0480023821.01.T01
Gene Sequence

>MsG0480023821.01.T01

ATGGTGAGAGTAATTCCCATCGCTAGTTTTTCAATTCTACCCACTCTTTCTCTCTTCAATCGCTCTCCCCGAATCTCTTTCTCTCATTTTTCCACCGCTGCAGTTTCACAAACCCATAGTTTTGGCTTGAAAGCTTGTAGATTATTCAGACAAAATGGAAACTCTCTGAAAGTGATGTCATCTGGGAACGTGTCATCATCAGTCACTGCTGCTTCATCAGAAAATGTACTGGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGTGACTTGGATAGAACTATTAAATTTTATACCGAGTGTCTGGGAATGAAGCTGCTTAGAAAGCGCGACATACCGGAAGAAAGATATACCAATGCTTTTCTTGGATATGGACCTGAAGATTCACATTTTGTTATTGAACTCACATACAATTACGGAGTTGATAAATATGATATTGGAACTGCATTTGGCCATTTCGGTATTGCTGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAAGGTGGAAAAATAACTAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTAATCGCATTTGTTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCCGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATTGAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGTACGCGGGATAATCCAGACAACAAGTATACCATAGCAATGCTTGGTTATGGTCCAGAAGATAAAACGACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCGATTAAACTATCCACGGGAAAGCTTACTCGGGAACCTGGACCATTGCCTGGTATCAACACAAAAATTACTGCATGCCTGGATCCTGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTAAAGGAGTTGGAGTAG

Protein sequence

>MsG0480023821.01.T01

MVRVIPIASFSILPTLSLFNRSPRISFSHFSTAAVSQTHSFGLKACRLFRQNGNSLKVMSSGNVSSSVTAASSENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE*