AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009103.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009103.01.T01 MTR_2g054130 85.981 428 14 2 1 428 1 382 0.0 738
MsG0280009103.01.T01 MTR_2g055010 87.440 414 14 1 1 414 1 376 0.0 735
MsG0280009103.01.T01 MTR_4g019150 30.769 221 118 9 210 423 10 202 3.19e-13 68.6
MsG0280009103.01.T01 MTR_4g019130 32.468 231 98 10 211 423 11 201 7.12e-13 67.8
MsG0280009103.01.T01 MTR_7g104650 32.317 164 80 5 263 398 116 276 8.65e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009103.01.T01 AT5G20140 65.508 374 82 3 56 428 51 378 1.04e-177 501
MsG0280009103.01.T01 AT5G20140 66.193 352 80 2 56 406 51 364 5.74e-170 482
MsG0280009103.01.T01 AT2G37970 33.714 175 77 6 263 398 56 230 5.33e-12 65.9

Find 110 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTCGCAGGTATATATT+TGG 0.154800 2:-45375852 MsG0280009103.01.T01:intron
AAATCATCATGCTTAGTAAT+TGG 0.154857 2:+45377933 None:intergenic
CCTCAATTTCCCAGGACTTT+TGG 0.191970 2:-45376599 MsG0280009103.01.T01:intron
CTACAACTTGCACCACTTTC+CGG 0.208753 2:-45378199 MsG0280009103.01.T01:CDS
CAGACCATCTTTAATGATAT+TGG 0.210028 2:+45375296 None:intergenic
TTCAACTAAGCTCAGATTAA+TGG 0.251072 2:+45378085 None:intergenic
AAGCTAACTGTTTCTTGATT+AGG 0.251086 2:+45375411 None:intergenic
ACAAATGGAGACAAGCTATC+TGG 0.265343 2:-45375985 MsG0280009103.01.T01:CDS
AAAAGACATATTAGCAAATA+AGG 0.276348 2:-45373833 MsG0280009103.01.T01:three_prime_UTR
TGTCTGATGGAAGAACTATT+TGG 0.281044 2:+45375745 None:intergenic
GTAGGCTTTCACTTATTCTT+TGG 0.282132 2:-45373751 MsG0280009103.01.T01:three_prime_UTR
ACTGTTTCTTGATTAGGATT+TGG 0.296904 2:+45375417 None:intergenic
AAACCAGAATTGGTCTTTAC+AGG 0.303338 2:-45376897 MsG0280009103.01.T01:CDS
GTTCCTGTAAAGACCAATTC+TGG 0.315384 2:+45376894 None:intergenic
CTTTACAGGAACATCTGTTA+TGG 0.331343 2:-45376883 MsG0280009103.01.T01:CDS
TCCTCACCTCTTTGATGATA+AGG 0.332232 2:-45378000 MsG0280009103.01.T01:CDS
ATGGGTGTTAACCCAGAAAA+TGG 0.339771 2:-45376864 MsG0280009103.01.T01:CDS
CCTCACCTCTTTGATGATAA+GGG 0.345368 2:-45377999 MsG0280009103.01.T01:CDS
GATTTACAAGACACCAGATT+TGG 0.350699 2:-45376401 MsG0280009103.01.T01:CDS
AACTATTTGGATTGAGACTT+TGG 0.355211 2:+45375758 None:intergenic
GCCTCAGTTTCAGCTGCATT+GGG 0.369293 2:-45377865 MsG0280009103.01.T01:CDS
CAGATACAAGGAGTGATGTT+TGG 0.371055 2:-45373878 MsG0280009103.01.T01:three_prime_UTR
TACGGTGTCTCCGTGGTGGC+TGG 0.372285 2:+45378129 None:intergenic
AACAGAGAATGACATCAATA+TGG 0.376578 2:+45373942 None:intergenic
AGCCTCAGTTTCAGCTGCAT+TGG 0.379055 2:-45377866 MsG0280009103.01.T01:CDS
CTCTTTGTTTCTTTGTCTGA+TGG 0.379732 2:+45375732 None:intergenic
TATTTGGGTGATTCCAAATC+TGG 0.380267 2:+45376388 None:intergenic
AAATAAGGTGCATGGTCATT+AGG 0.381234 2:-45373818 MsG0280009103.01.T01:three_prime_UTR
CATCTTGTAGTTATTTCATA+AGG 0.386402 2:+45376954 None:intergenic
AGAGGAATGAAGTGCTCATT+TGG 0.389953 2:-45374084 MsG0280009103.01.T01:CDS
ACCGGCTTTAATGATGTTGC+TGG 0.397252 2:-45375958 MsG0280009103.01.T01:CDS
TTGGCTAGATGACTTCTCAT+TGG 0.404823 2:-45374065 MsG0280009103.01.T01:CDS
TTTACAGGAACATCTGTTAT+GGG 0.408859 2:-45376882 MsG0280009103.01.T01:CDS
GCTGCAGTAATAAAGTTTAG+TGG 0.421311 2:-45375366 MsG0280009103.01.T01:CDS
AGGAAATGGGTGGGAGAGAA+TGG 0.421650 2:+45378220 None:intergenic
AATCATCATGCTTAGTAATT+GGG 0.426244 2:+45377934 None:intergenic
TTTATTGGAAGTATTCAAAC+AGG 0.429041 2:-45376538 MsG0280009103.01.T01:intron
CGCTCCAATATCATTAAAGA+TGG 0.429781 2:-45375300 MsG0280009103.01.T01:CDS
GCTTCCATGGAAACCAGAAT+TGG 0.431262 2:-45376907 MsG0280009103.01.T01:CDS
TCAGCTGCATTGGGCTAAAC+CGG 0.439958 2:-45377856 MsG0280009103.01.T01:intron
TCGAACATGGTCCTTCATAA+TGG 0.440473 2:-45375229 MsG0280009103.01.T01:CDS
GTGGTGCAAGTTGTAGGAAA+TGG 0.442861 2:+45378206 None:intergenic
CAGTTATTTGTTACGTGGCC+AGG 0.445325 2:-45378273 None:intergenic
GTTAGCTTGAGAAAGGTAGA+AGG 0.445389 2:-45375396 MsG0280009103.01.T01:CDS
CGGAAAGTGGTGCAAGTTGT+AGG 0.450152 2:+45378200 None:intergenic
AGGGTAGTTGTGGATGTTGA+AGG 0.454523 2:+45378163 None:intergenic
GCATGAATGCTCATATCAAA+AGG 0.455246 2:-45376242 MsG0280009103.01.T01:intron
CTTGCCCGTTACAATGATCC+AGG 0.455438 2:-45375252 MsG0280009103.01.T01:CDS
CCAAATATCAAATATTAAAA+CGG 0.467136 2:-45376372 MsG0280009103.01.T01:CDS
TGAAATTCATGCTGCTTCCA+TGG 0.477688 2:-45376920 MsG0280009103.01.T01:CDS
CAAATGGAGACAAGCTATCT+GGG 0.479821 2:-45375984 MsG0280009103.01.T01:CDS
TTCGCGAACAATATCCTCCA+TGG 0.485927 2:+45375338 None:intergenic
TTCACTATCTTCCGTTTCCA+TGG 0.487240 2:-45378249 MsG0280009103.01.T01:exon
AAGACCAATTCTGGTTTCCA+TGG 0.488831 2:+45376903 None:intergenic
GGAGAGAATGGAAGTGGCCA+TGG 0.497885 2:+45378232 None:intergenic
GGAGGATATTGTTCGCGAAA+AGG 0.499867 2:-45375334 MsG0280009103.01.T01:CDS
TGGTGCAAGTTGTAGGAAAT+GGG 0.500255 2:+45378207 None:intergenic
TTCGTAGTAGTAGAAACAAA+TGG 0.502411 2:-45376000 MsG0280009103.01.T01:CDS
TTCGCAGCATACCATTATGA+AGG 0.511503 2:+45375218 None:intergenic
GACAAGCTATCTGGGAATAC+CGG 0.516068 2:-45375976 MsG0280009103.01.T01:CDS
TCGATGGCTTGAGTGAATAC+AGG 0.518542 2:+45375792 None:intergenic
AGAAACAGTTAGCTTGAGAA+AGG 0.518821 2:-45375403 MsG0280009103.01.T01:CDS
AATGGAAGTGGCCATGGAAA+CGG 0.522227 2:+45378238 None:intergenic
ATAAATTATCTTCAGATACA+AGG 0.522440 2:-45373890 MsG0280009103.01.T01:three_prime_UTR
TTTGTTTCTACTACTACGAA+TGG 0.522785 2:+45376003 None:intergenic
TCGACCTGGATCATTGTAAC+GGG 0.527359 2:+45375248 None:intergenic
GAAGAAGTGGAGGGTAGTTG+TGG 0.530493 2:+45378153 None:intergenic
GGAGGTTGGTCGCCGGAAAG+TGG 0.531539 2:+45378187 None:intergenic
TCGCGAACAATATCCTCCAT+GGG 0.547839 2:+45375339 None:intergenic
GCCCAATGCAGCTGAAACTG+AGG 0.556468 2:+45377864 None:intergenic
CATCGGTATCTTCTCTGCTG+TGG 0.557509 2:+45375821 None:intergenic
CGTGGTGGCTGGAGAAGAAG+TGG 0.560248 2:+45378140 None:intergenic
CATTAACAATGAAGTACTCA+TGG 0.566632 2:-45374037 MsG0280009103.01.T01:three_prime_UTR
CCCAGCAACATCATTAAAGC+CGG 0.567439 2:+45375957 None:intergenic
CTTATGAAATAACTACAAGA+TGG 0.569482 2:-45376953 MsG0280009103.01.T01:CDS
TGGATGTTGAAGGCGGAGGT+TGG 0.570197 2:+45378173 None:intergenic
GTTGTGGATGTTGAAGGCGG+AGG 0.572578 2:+45378169 None:intergenic
TGGGTGGGAGAGAATGGAAG+TGG 0.573642 2:+45378226 None:intergenic
CCGGCTTTAATGATGTTGCT+GGG 0.579992 2:-45375957 MsG0280009103.01.T01:intron
TTCGACCTGGATCATTGTAA+CGG 0.580924 2:+45375247 None:intergenic
AAAGTTTAGTGGAAAACCCA+TGG 0.583126 2:-45375355 MsG0280009103.01.T01:CDS
ACAATGATCCAGGTCGAACA+TGG 0.586299 2:-45375242 MsG0280009103.01.T01:CDS
TGAAGGCGGAGGTTGGTCGC+CGG 0.586760 2:+45378180 None:intergenic
TCAAATGGCAACAATCAAGA+AGG 0.586777 2:+45375194 None:intergenic
AAAACGGACAGCAAATTATG+AGG 0.586779 2:-45376356 MsG0280009103.01.T01:CDS
ATGAAGGACCATGTTCGACC+TGG 0.591864 2:+45375234 None:intergenic
TGCAAGTTGTAGGAAATGGG+TGG 0.597054 2:+45378210 None:intergenic
CACTTCTTCTCCAGCCACCA+CGG 0.597086 2:-45378139 MsG0280009103.01.T01:CDS
AATAGTGTACACTGTACAGT+AGG 0.597176 2:-45373769 MsG0280009103.01.T01:three_prime_UTR
CACTATGTTCATGAATGAGA+AGG 0.597407 2:+45376329 None:intergenic
TTTGGACAAGTCAATATCGA+TGG 0.598178 2:+45375776 None:intergenic
AAACGGAAGATAGTGAATCC+TGG 0.598289 2:+45378255 None:intergenic
ACTAAGCATGATGATTTGAG+TGG 0.598452 2:-45377927 MsG0280009103.01.T01:CDS
GCAAGTTGTAGGAAATGGGT+GGG 0.599564 2:+45378211 None:intergenic
GCAAGCAAACAACCAGGCTG+AGG 0.606063 2:+45375270 None:intergenic
CATCAGACAAAGAAACAAAG+AGG 0.609686 2:-45375731 MsG0280009103.01.T01:intron
GATGGTCTGAAACCTCAGCC+TGG 0.615097 2:-45375282 MsG0280009103.01.T01:CDS
CAGCATGAATTTCATAACCA+TGG 0.617626 2:+45376929 None:intergenic
CAATACCCTTATCATCAAAG+AGG 0.620697 2:+45377994 None:intergenic
ATATTAGCAAATAAGGTGCA+TGG 0.624531 2:-45373826 MsG0280009103.01.T01:three_prime_UTR
ATATATGACATATTCATACA+AGG 0.624779 2:-45373716 MsG0280009103.01.T01:three_prime_UTR
GTGAATACAGGAGTAGTCAT+CGG 0.628384 2:+45375804 None:intergenic
GTAGTTGTGGATGTTGAAGG+CGG 0.633641 2:+45378166 None:intergenic
CCCTTATCATCAAAGAGGTG+AGG 0.636487 2:+45377999 None:intergenic
AGCTTGAGAAAGGTAGAAGG+AGG 0.657758 2:-45375393 MsG0280009103.01.T01:CDS
TAACGGGCAAGCAAACAACC+AGG 0.667765 2:+45375264 None:intergenic
GGTGGCTGGAGAAGAAGTGG+AGG 0.668019 2:+45378143 None:intergenic
AATAACTACAAGATGGACCA+TGG 0.682550 2:-45376946 MsG0280009103.01.T01:CDS
GTGGCTGGAGAAGAAGTGGA+GGG 0.697700 2:+45378144 None:intergenic
GTTTAGTGGAAAACCCATGG+AGG 0.746638 2:-45375352 MsG0280009103.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATCACATTAAAT+GGG - Chr2:45373812-45373831 MsG0280009103.01.T01:three_prime_UTR 10.0%
!! TTTAACCATATAAAATAATT+AGG + Chr2:45377339-45377358 None:intergenic 10.0%
!!! AATAAATAAATTAGTTTACA+TGG - Chr2:45374236-45374255 MsG0280009103.01.T01:intron 10.0%
!!! AATTATTTTATATGGTTAAA+GGG - Chr2:45377339-45377358 MsG0280009103.01.T01:intron 10.0%
!!! ATTTAATGTGATTTTTTTTA+CGG + Chr2:45373812-45373831 None:intergenic 10.0%
!!! TAATTATTTTATATGGTTAA+AGG - Chr2:45377338-45377357 MsG0280009103.01.T01:intron 10.0%
!! ATAATATTGTATGAAAATCA+AGG + Chr2:45374739-45374758 None:intergenic 15.0%
!! ATTACATTAAAGAATTAAGA+GGG + Chr2:45377551-45377570 None:intergenic 15.0%
!! CCAAATATCAAATATTAAAA+CGG - Chr2:45375548-45375567 MsG0280009103.01.T01:intron 15.0%
!! GTAAAAAAAATCACATTAAA+TGG - Chr2:45373811-45373830 MsG0280009103.01.T01:three_prime_UTR 15.0%
!! TTGTTTGTATAAAATATCAT+AGG + Chr2:45374546-45374565 None:intergenic 15.0%
!!! CGTTTTAATATTTGATATTT+GGG + Chr2:45375550-45375569 None:intergenic 15.0%
!!! TACTTTCATATTCATTTTTT+TGG - Chr2:45374591-45374610 MsG0280009103.01.T01:intron 15.0%
!!! TGATTTTCATACAATATTAT+AGG - Chr2:45374739-45374758 MsG0280009103.01.T01:intron 15.0%
!!! TTATCTATGGTTTTAAATTT+TGG - Chr2:45375125-45375144 MsG0280009103.01.T01:intron 15.0%
!! AAAAGACATATTAGCAAATA+AGG - Chr2:45378087-45378106 MsG0280009103.01.T01:CDS 20.0%
!! AACAAGACATAAAAAAGTTA+AGG + Chr2:45374910-45374929 None:intergenic 20.0%
!! ATAAATTATCTTCAGATACA+AGG - Chr2:45378030-45378049 MsG0280009103.01.T01:CDS 20.0%
!! ATATATGACATATTCATACA+AGG - Chr2:45378204-45378223 MsG0280009103.01.T01:CDS 20.0%
!! ATATCAAAAGTTAACACAAA+AGG - Chr2:45375752-45375771 MsG0280009103.01.T01:CDS 20.0%
!! CATTACATTAAAGAATTAAG+AGG + Chr2:45377552-45377571 None:intergenic 20.0%
!! TACACTGCAAAAATATAATT+TGG + Chr2:45378249-45378268 None:intergenic 20.0%
!! TAGAGACTAGTAAAAAAAAA+GGG - Chr2:45376895-45376914 MsG0280009103.01.T01:CDS 20.0%
!! TATAACAAAAAGAAAATGCT+CGG - Chr2:45376780-45376799 MsG0280009103.01.T01:intron 20.0%
!! TTAGAGACTAGTAAAAAAAA+AGG - Chr2:45376894-45376913 MsG0280009103.01.T01:CDS 20.0%
!! TTAGAGACTAGTAAAAAAAA+GGG - Chr2:45376894-45376913 MsG0280009103.01.T01:CDS 20.0%
!! TTTCAGCTTATTTGTATATA+GGG - Chr2:45374197-45374216 MsG0280009103.01.T01:intron 20.0%
!!! AAGCTATTTTTGTAACAAAA+TGG + Chr2:45374358-45374377 None:intergenic 20.0%
!!! AATGACTATTTTTCATTTGA+AGG - Chr2:45375359-45375378 MsG0280009103.01.T01:CDS 20.0%
!!! ACTAGCCTAATTATTTTATA+TGG - Chr2:45377331-45377350 MsG0280009103.01.T01:intron 20.0%
!!! CCGTTTTAATATTTGATATT+TGG + Chr2:45375551-45375570 None:intergenic 20.0%
!!! TATGGATTTTCTTAGAATTT+GGG - Chr2:45377577-45377596 MsG0280009103.01.T01:intron 20.0%
!!! TGAATTCATTGTTTTTTTGA+TGG - Chr2:45375871-45375890 MsG0280009103.01.T01:intron 20.0%
!!! TTTTCAGCTTATTTGTATAT+AGG - Chr2:45374196-45374215 MsG0280009103.01.T01:intron 20.0%
!!! TTTTTCATTTGAAGGTTTAT+TGG - Chr2:45375367-45375386 MsG0280009103.01.T01:CDS 20.0%
!!! TTTTTTTACAATTTGATGAG+TGG + Chr2:45378130-45378149 None:intergenic 20.0%
!!! TTTTTTTTTACTAGTCTCTA+AGG + Chr2:45376895-45376914 None:intergenic 20.0%
! AAACTACTGCAAATTAATCT+TGG + Chr2:45377282-45377301 None:intergenic 25.0%
! AAATCATCATGCTTAGTAAT+TGG + Chr2:45373990-45374009 None:intergenic 25.0%
! AACATATGCTTAGTAAAGAA+AGG - Chr2:45376402-45376421 MsG0280009103.01.T01:CDS 25.0%
! AATCATCATGCTTAGTAATT+GGG + Chr2:45373989-45374008 None:intergenic 25.0%
! ACAAAAGGATGTATCTTATA+TGG - Chr2:45375824-45375843 MsG0280009103.01.T01:CDS 25.0%
! ACATGAATACTAATCTCTAA+TGG + Chr2:45377182-45377201 None:intergenic 25.0%
! ACTGCAAAAATATAATTTGG+AGG + Chr2:45378246-45378265 None:intergenic 25.0%
! ATACAAATAAGCTGAAAACA+TGG + Chr2:45374194-45374213 None:intergenic 25.0%
! ATGAATACTAATCTCTAATG+GGG + Chr2:45377180-45377199 None:intergenic 25.0%
! CATGAATACTAATCTCTAAT+GGG + Chr2:45377181-45377200 None:intergenic 25.0%
! CATGCATATTCAAAATCAAA+TGG + Chr2:45376744-45376763 None:intergenic 25.0%
! CTTAGAGACTAGTAAAAAAA+AGG - Chr2:45376893-45376912 MsG0280009103.01.T01:CDS 25.0%
! CTTATGAAATAACTACAAGA+TGG - Chr2:45374967-45374986 MsG0280009103.01.T01:intron 25.0%
! GAATGTATAATCACATATGT+TGG + Chr2:45374711-45374730 None:intergenic 25.0%
! GTAGAAAAACTAAACCATAA+TGG + Chr2:45377489-45377508 None:intergenic 25.0%
! TAAATGAAGTGGTATTATGT+TGG - Chr2:45375281-45375300 MsG0280009103.01.T01:CDS 25.0%
! TAACTTTATAGAGACAACTT+AGG - Chr2:45374160-45374179 MsG0280009103.01.T01:intron 25.0%
! TACTTCAAGTCAAAAACAAA+AGG - Chr2:45375809-45375828 MsG0280009103.01.T01:CDS 25.0%
! TTAACCACTTCTAGTATTAA+CGG + Chr2:45374399-45374418 None:intergenic 25.0%
! TTCTTTACTAAGCATATGTT+TGG + Chr2:45376402-45376421 None:intergenic 25.0%
!! ATTGGTGTTTATAAATGAAG+TGG - Chr2:45375270-45375289 MsG0280009103.01.T01:CDS 25.0%
!! CAAATTCTAAGAAAATCCAT+AGG + Chr2:45377578-45377597 None:intergenic 25.0%
!! CATCTTGTAGTTATTTCATA+AGG + Chr2:45374969-45374988 None:intergenic 25.0%
!! CTATGGATTTTCTTAGAATT+TGG - Chr2:45377576-45377595 MsG0280009103.01.T01:intron 25.0%
!! GTTAACTTTTGATATGTTTG+TGG + Chr2:45375747-45375766 None:intergenic 25.0%
!! TTGCAGTGTATACAATTTTA+AGG - Chr2:45378259-45378278 MsG0280009103.01.T01:five_prime_UTR 25.0%
!! TTTTACATGCCTACTATTTT+TGG + Chr2:45378070-45378089 None:intergenic 25.0%
!!! ATTTTCTTAGAATTTGGGTT+GGG - Chr2:45377582-45377601 MsG0280009103.01.T01:intron 25.0%
!!! CATTTGATTTTGAATATGCA+TGG - Chr2:45376742-45376761 MsG0280009103.01.T01:intron 25.0%
!!! CTTTTTTTTACTAGTCTCTA+AGG + Chr2:45377016-45377035 None:intergenic 25.0%
!!! GACTTGAAGTAGTTTTATAA+TGG + Chr2:45375800-45375819 None:intergenic 25.0%
!!! TGTTTTTTTGATGGTATAAC+AGG - Chr2:45375880-45375899 MsG0280009103.01.T01:intron 25.0%
!!! TTATGTCTTGTTTGTTCAAT+TGG - Chr2:45374918-45374937 MsG0280009103.01.T01:intron 25.0%
!!! TTGAAGTAGTTTTATAATGG+TGG + Chr2:45375797-45375816 None:intergenic 25.0%
!!! TTTATTGGAAGTATTCAAAC+AGG - Chr2:45375382-45375401 MsG0280009103.01.T01:CDS 25.0%
!!! TTTTAAATTTTGGTTGCAGT+CGG - Chr2:45375135-45375154 MsG0280009103.01.T01:intron 25.0%
AACAACATACTGTAAGATCT+TGG + Chr2:45376872-45376891 None:intergenic 30.0%
AACAGAGAATGACATCAATA+TGG + Chr2:45377981-45378000 None:intergenic 30.0%
AACTATTTGGATTGAGACTT+TGG + Chr2:45376165-45376184 None:intergenic 30.0%
AAGAGGAAAAAAAATGCCAA+AGG + Chr2:45375436-45375455 None:intergenic 30.0%
AGCAGACAAATATCAAATTG+AGG + Chr2:45377770-45377789 None:intergenic 30.0%
ATATTAGCAAATAAGGTGCA+TGG - Chr2:45378094-45378113 MsG0280009103.01.T01:CDS 30.0%
ATTTGTATATAGGGTCTGTT+TGG - Chr2:45374206-45374225 MsG0280009103.01.T01:intron 30.0%
CAGACCATCTTTAATGATAT+TGG + Chr2:45376627-45376646 None:intergenic 30.0%
CGATAAAAAAAACCGTAAGA+TGG + Chr2:45374105-45374124 None:intergenic 30.0%
GACATCAATATGGAAAAACT+TGG + Chr2:45377971-45377990 None:intergenic 30.0%
GTTACTATGAGATATAGACA+CGG + Chr2:45374794-45374813 None:intergenic 30.0%
TAACCACTTCTAGTATTAAC+GGG + Chr2:45374398-45374417 None:intergenic 30.0%
TATCTCAGCTCCTATAAAAT+CGG - Chr2:45377607-45377626 MsG0280009103.01.T01:intron 30.0%
TGAAAACAGACTATTGTGTA+AGG + Chr2:45377089-45377108 None:intergenic 30.0%
TGTTAAAAATCTTCATTCGC+AGG - Chr2:45376057-45376076 MsG0280009103.01.T01:intron 30.0%
TTCAACTAAGCTCAGATTAA+TGG + Chr2:45373838-45373857 None:intergenic 30.0%
TTCATTCGCAGGTATATATT+TGG - Chr2:45376068-45376087 MsG0280009103.01.T01:intron 30.0%
TTCGTAGTAGTAGAAACAAA+TGG - Chr2:45375920-45375939 MsG0280009103.01.T01:intron 30.0%
TTGTTGCAAAAAACAGTGTA+AGG + Chr2:45376969-45376988 None:intergenic 30.0%
TTTACAGGAACATCTGTTAT+GGG - Chr2:45375038-45375057 MsG0280009103.01.T01:intron 30.0%
! AAGCTAACTGTTTCTTGATT+AGG + Chr2:45376512-45376531 None:intergenic 30.0%
! ACTGTTTCTTGATTAGGATT+TGG + Chr2:45376506-45376525 None:intergenic 30.0%
! AGTAAAGAAAGGAAGTTTTG+TGG - Chr2:45376413-45376432 MsG0280009103.01.T01:intron 30.0%
! ATGGATTTGAAGTTCCATTA+TGG - Chr2:45377472-45377491 MsG0280009103.01.T01:intron 30.0%
! CATTAACAATGAAGTACTCA+TGG - Chr2:45377883-45377902 MsG0280009103.01.T01:CDS 30.0%
! GATTTTCTTAGAATTTGGGT+TGG - Chr2:45377581-45377600 MsG0280009103.01.T01:intron 30.0%
! GTAATGATTTGCACACATAA+CGG + Chr2:45374300-45374319 None:intergenic 30.0%
! GTTGAACTAGCTTATAAACT+AGG + Chr2:45374278-45374297 None:intergenic 30.0%
! TAAAGGCACAATCATCAAAA+AGG + Chr2:45375713-45375732 None:intergenic 30.0%
! TAACAACTCACAGCAAATTT+TGG + Chr2:45375470-45375489 None:intergenic 30.0%
! TTGTCTAGAATTGTTAGGTT+AGG + Chr2:45377409-45377428 None:intergenic 30.0%
!! GAAGTTTTGTGGAAGAATTA+GGG - Chr2:45376424-45376443 MsG0280009103.01.T01:intron 30.0%
!! TAATAGGCTGAAACTTGTTT+TGG + Chr2:45374435-45374454 None:intergenic 30.0%
!! TGGGAAAATGACTTTTAAGA+TGG + Chr2:45377944-45377963 None:intergenic 30.0%
!! TTTGTTTCTACTACTACGAA+TGG + Chr2:45375920-45375939 None:intergenic 30.0%
!! TTTTGGAAGACTTACAAAAG+AGG + Chr2:45375453-45375472 None:intergenic 30.0%
!!! AGATGGAATTTTTTACTGAC+TGG + Chr2:45377927-45377946 None:intergenic 30.0%
!!! TACAAAACTTGCCATTTTCT+GGG + Chr2:45375070-45375089 None:intergenic 30.0%
!!! TTTAAATTTTGGTTGCAGTC+GGG - Chr2:45375136-45375155 MsG0280009103.01.T01:intron 30.0%
AAAACGGACAGCAAATTATG+AGG - Chr2:45375564-45375583 MsG0280009103.01.T01:intron 35.0%
AAAGTTTAGTGGAAAACCCA+TGG - Chr2:45376565-45376584 MsG0280009103.01.T01:CDS 35.0%
AAATAAGGTGCATGGTCATT+AGG - Chr2:45378102-45378121 MsG0280009103.01.T01:CDS 35.0%
AAGCGGGAAATCAGAAATAT+AGG + Chr2:45376322-45376341 None:intergenic 35.0%
AATAACTACAAGATGGACCA+TGG - Chr2:45374974-45374993 MsG0280009103.01.T01:intron 35.0%
AATAGTGTACACTGTACAGT+AGG - Chr2:45378151-45378170 MsG0280009103.01.T01:CDS 35.0%
AATTTCCAACTATCCAGTAC+TGG - Chr2:45375100-45375119 MsG0280009103.01.T01:intron 35.0%
AATTTGTCGCTCTCTATTTC+AGG - Chr2:45376023-45376042 MsG0280009103.01.T01:intron 35.0%
ACTAAGCATGATGATTTGAG+TGG - Chr2:45373993-45374012 MsG0280009103.01.T01:three_prime_UTR 35.0%
ATCAAAATCCATATCTCCTG+TGG + Chr2:45377731-45377750 None:intergenic 35.0%
CAATACCCTTATCATCAAAG+AGG + Chr2:45373929-45373948 None:intergenic 35.0%
CACAAACATGGAAAACAAAC+AGG + Chr2:45376288-45376307 None:intergenic 35.0%
CACTATGTTCATGAATGAGA+AGG + Chr2:45375594-45375613 None:intergenic 35.0%
CAGCATGAATTTCATAACCA+TGG + Chr2:45374994-45375013 None:intergenic 35.0%
CATCAGACAAAGAAACAAAG+AGG - Chr2:45376189-45376208 MsG0280009103.01.T01:intron 35.0%
CATGCATGTAAGAAGTAGTT+TGG + Chr2:45377445-45377464 None:intergenic 35.0%
CATTTGCTTCATTTGTCTTG+TGG - Chr2:45377800-45377819 MsG0280009103.01.T01:intron 35.0%
CCTAACAATTCTAGACAAGA+TGG - Chr2:45377411-45377430 MsG0280009103.01.T01:intron 35.0%
CCTGTGGGACAATTATAATT+GGG + Chr2:45377715-45377734 None:intergenic 35.0%
CGATGACTAGTGTTATCAAT+TGG - Chr2:45375252-45375271 MsG0280009103.01.T01:CDS 35.0%
CGCTCCAATATCATTAAAGA+TGG - Chr2:45376620-45376639 MsG0280009103.01.T01:intron 35.0%
CTGTGGGACAATTATAATTG+GGG + Chr2:45377714-45377733 None:intergenic 35.0%
CTTTAATGTAATGCTGCCTA+TGG - Chr2:45377559-45377578 MsG0280009103.01.T01:intron 35.0%
CTTTACAGGAACATCTGTTA+TGG - Chr2:45375037-45375056 MsG0280009103.01.T01:intron 35.0%
GATAGTTGGAAATTACCACA+TGG + Chr2:45375094-45375113 None:intergenic 35.0%
GATTTACAAGACACCAGATT+TGG - Chr2:45375519-45375538 MsG0280009103.01.T01:intron 35.0%
GCATGAATGCTCATATCAAA+AGG - Chr2:45375678-45375697 MsG0280009103.01.T01:intron 35.0%
GCTGCAGTAATAAAGTTTAG+TGG - Chr2:45376554-45376573 MsG0280009103.01.T01:CDS 35.0%
GTAGGCTTTCACTTATTCTT+TGG - Chr2:45378169-45378188 MsG0280009103.01.T01:CDS 35.0%
GTTTCTCTCTTTCCATCTTA+CGG - Chr2:45374090-45374109 MsG0280009103.01.T01:intron 35.0%
TAACCCGTTAATACTAGAAG+TGG - Chr2:45374392-45374411 MsG0280009103.01.T01:intron 35.0%
TATTTGGGTGATTCCAAATC+TGG + Chr2:45375535-45375554 None:intergenic 35.0%
TCAAAATCCATATCTCCTGT+GGG + Chr2:45377730-45377749 None:intergenic 35.0%
TCAAATGGCAACAATCAAGA+AGG + Chr2:45376729-45376748 None:intergenic 35.0%
TCCTGTGGGACAATTATAAT+TGG + Chr2:45377716-45377735 None:intergenic 35.0%
TGGTAGAACAAACGCTTATT+TGG - Chr2:45374851-45374870 MsG0280009103.01.T01:intron 35.0%
TGTCTGATGGAAGAACTATT+TGG + Chr2:45376178-45376197 None:intergenic 35.0%
TGTGGTTTATGACATTGAAG+AGG - Chr2:45377818-45377837 MsG0280009103.01.T01:intron 35.0%
TTACTCTTGATGTATGCCTT+TGG - Chr2:45375417-45375436 MsG0280009103.01.T01:CDS 35.0%
TTAGGTTAGGTTCAACAAGT+AGG + Chr2:45377396-45377415 None:intergenic 35.0%
TTTGGACAAGTCAATATCGA+TGG + Chr2:45376147-45376166 None:intergenic 35.0%
! AACCCTTTATTTGTCTGAAG+CGG + Chr2:45376339-45376358 None:intergenic 35.0%
! AGAAACAGTTAGCTTGAGAA+AGG - Chr2:45376517-45376536 MsG0280009103.01.T01:intron 35.0%
! ATTGATAACACTAGTCATCG+AGG + Chr2:45375252-45375271 None:intergenic 35.0%
! CCATCTTGTCTAGAATTGTT+AGG + Chr2:45377414-45377433 None:intergenic 35.0%
! CTATGTGTCACTATCGTATT+CGG - Chr2:45374765-45374784 MsG0280009103.01.T01:intron 35.0%
! CTCTTTGTTTCTTTGTCTGA+TGG + Chr2:45376191-45376210 None:intergenic 35.0%
! GATTTGACATTTTGCAGTTG+AGG - Chr2:45375497-45375516 MsG0280009103.01.T01:intron 35.0%
! GATTTTATAGGAGCTGAGAT+AGG + Chr2:45377608-45377627 None:intergenic 35.0%
! TGTTTGGAGCCAAAAATAGT+AGG - Chr2:45378058-45378077 MsG0280009103.01.T01:CDS 35.0%
! TTGTGGTGCAGTTTTCATAA+AGG + Chr2:45375730-45375749 None:intergenic 35.0%
!! AAACCAGAATTGGTCTTTAC+AGG - Chr2:45375023-45375042 MsG0280009103.01.T01:intron 35.0%
!! AAATAAAGGGTTAGTTGCCT+AGG - Chr2:45376347-45376366 MsG0280009103.01.T01:CDS 35.0%
!! AATAAAGGGTTAGTTGCCTA+GGG - Chr2:45376348-45376367 MsG0280009103.01.T01:CDS 35.0%
!! ATATGGAAAAACTTGGTGTG+TGG + Chr2:45377964-45377983 None:intergenic 35.0%
!! GGAAGTTTTGTGGAAGAATT+AGG - Chr2:45376423-45376442 MsG0280009103.01.T01:intron 35.0%
!! TATGGAAAAACTTGGTGTGT+GGG + Chr2:45377963-45377982 None:intergenic 35.0%
!!! CTACAAAACTTGCCATTTTC+TGG + Chr2:45375071-45375090 None:intergenic 35.0%
AAACGGAAGATAGTGAATCC+TGG + Chr2:45373668-45373687 None:intergenic 40.0%
AAGCCAAGACATGTATCTCT+TGG + Chr2:45376261-45376280 None:intergenic 40.0%
ACAAATGGAGACAAGCTATC+TGG - Chr2:45375935-45375954 MsG0280009103.01.T01:intron 40.0%
ACAACTTTACCGTTATGCCA+AGG - Chr2:45377152-45377171 MsG0280009103.01.T01:intron 40.0%
ACCATAGATAACACCAGTAC+TGG + Chr2:45375116-45375135 None:intergenic 40.0%
ACTGTCCAACACACGTTAAT+AGG + Chr2:45374451-45374470 None:intergenic 40.0%
AGAAGTGATTCCCTGATAGA+TGG - Chr2:45377234-45377253 MsG0280009103.01.T01:intron 40.0%
AGAGATACATGTCTTGGCTT+AGG - Chr2:45376261-45376280 MsG0280009103.01.T01:CDS 40.0%
AGTAAAAAAAAAGGGCAGCC+CGG - Chr2:45376903-45376922 MsG0280009103.01.T01:CDS 40.0%
ATCTGACCCTACTGCAATTA+AGG + Chr2:45375212-45375231 None:intergenic 40.0%
ATGCGACCTTAATTGCAGTA+GGG - Chr2:45375203-45375222 MsG0280009103.01.T01:intron 40.0%
ATGGAAAGAGAGAAACAGAC+CGG + Chr2:45374086-45374105 None:intergenic 40.0%
ATGGGTGTTAACCCAGAAAA+TGG - Chr2:45375056-45375075 MsG0280009103.01.T01:intron 40.0%
ATTAACGTGTGTTGGACAGT+GGG - Chr2:45374451-45374470 MsG0280009103.01.T01:intron 40.0%
CAAATGGAGACAAGCTATCT+GGG - Chr2:45375936-45375955 MsG0280009103.01.T01:intron 40.0%
CAGATACAAGGAGTGATGTT+TGG - Chr2:45378042-45378061 MsG0280009103.01.T01:CDS 40.0%
CCCAATTATAATTGTCCCAC+AGG - Chr2:45377712-45377731 MsG0280009103.01.T01:intron 40.0%
CGTACAATACACCAATTGGT+GGG + Chr2:45376943-45376962 None:intergenic 40.0%
CTTTAATGATGTTGCTGGGT+AGG - Chr2:45375967-45375986 MsG0280009103.01.T01:CDS 40.0%
GAAGTGATTCCCTGATAGAT+GGG - Chr2:45377235-45377254 MsG0280009103.01.T01:intron 40.0%
GGAACTTCAAATCCATCAAG+AGG + Chr2:45377468-45377487 None:intergenic 40.0%
GGGAAATCAGAAATATAGGC+AGG + Chr2:45376318-45376337 None:intergenic 40.0%
GTGAATACAGGAGTAGTCAT+CGG + Chr2:45376119-45376138 None:intergenic 40.0%
GTTCCAAGAGATACATGTCT+TGG - Chr2:45376255-45376274 MsG0280009103.01.T01:CDS 40.0%
GTTCCTGTAAAGACCAATTC+TGG + Chr2:45375029-45375048 None:intergenic 40.0%
GTTGTTGTCAAGTGACTGAA+AGG + Chr2:45377137-45377156 None:intergenic 40.0%
TAATTGTCCCACAGGAGATA+TGG - Chr2:45377720-45377739 MsG0280009103.01.T01:intron 40.0%
TAGTAAAAAAAAGGGCAGCC+CGG - Chr2:45377023-45377042 MsG0280009103.01.T01:intron 40.0%
TAGTGAATCCCAAAAGTCCT+GGG + Chr2:45375333-45375352 None:intergenic 40.0%
TATTAACGTGTGTTGGACAG+TGG - Chr2:45374450-45374469 MsG0280009103.01.T01:intron 40.0%
TCCCGCTTCAGACAAATAAA+GGG - Chr2:45376334-45376353 MsG0280009103.01.T01:CDS 40.0%
TCGAACATGGTCCTTCATAA+TGG - Chr2:45376691-45376710 MsG0280009103.01.T01:intron 40.0%
TGGTGCAAGTTGTAGGAAAT+GGG + Chr2:45373716-45373735 None:intergenic 40.0%
TTAGTGAATCCCAAAAGTCC+TGG + Chr2:45375334-45375353 None:intergenic 40.0%
TTCACTATCTTCCGTTTCCA+TGG - Chr2:45373671-45373690 MsG0280009103.01.T01:three_prime_UTR 40.0%
TTCAGCCTATTAACGTGTGT+TGG - Chr2:45374443-45374462 MsG0280009103.01.T01:intron 40.0%
TTCCCGCTTCAGACAAATAA+AGG - Chr2:45376333-45376352 MsG0280009103.01.T01:CDS 40.0%
TTCGACCTGGATCATTGTAA+CGG + Chr2:45376676-45376695 None:intergenic 40.0%
TTCGCAGCATACCATTATGA+AGG + Chr2:45376705-45376724 None:intergenic 40.0%
TTCGTAATCCTCAATTTCCC+AGG - Chr2:45375313-45375332 MsG0280009103.01.T01:CDS 40.0%
TTGGCTAGATGACTTCTCAT+TGG - Chr2:45377855-45377874 MsG0280009103.01.T01:intron 40.0%
! ACCCTTTATTTGTCTGAAGC+GGG + Chr2:45376338-45376357 None:intergenic 40.0%
! AGAGGAATGAAGTGCTCATT+TGG - Chr2:45377836-45377855 MsG0280009103.01.T01:intron 40.0%
! CCTCACCTCTTTGATGATAA+GGG - Chr2:45373921-45373940 MsG0280009103.01.T01:three_prime_UTR 40.0%
! CTCAATTTCCCAGGACTTTT+GGG - Chr2:45375322-45375341 MsG0280009103.01.T01:CDS 40.0%
! CTGATTGAGTTGCTATAGAC+AGG - Chr2:45374942-45374961 MsG0280009103.01.T01:intron 40.0%
! GTTAGCTTGAGAAAGGTAGA+AGG - Chr2:45376524-45376543 MsG0280009103.01.T01:intron 40.0%
! TAACACCAGTACTGGATAGT+TGG + Chr2:45375108-45375127 None:intergenic 40.0%
! TCCTCACCTCTTTGATGATA+AGG - Chr2:45373920-45373939 MsG0280009103.01.T01:three_prime_UTR 40.0%
! TGAAATTCATGCTGCTTCCA+TGG - Chr2:45375000-45375019 MsG0280009103.01.T01:intron 40.0%
!! AAGACCAATTCTGGTTTCCA+TGG + Chr2:45375020-45375039 None:intergenic 40.0%
!! GACTTATGATCTCTGAAGCA+CGG + Chr2:45374499-45374518 None:intergenic 40.0%
!! GCTCTACAAGCCGATTTTAT+AGG + Chr2:45377620-45377639 None:intergenic 40.0%
!! TCCAGTACTGGTGTTATCTA+TGG - Chr2:45375112-45375131 MsG0280009103.01.T01:intron 40.0%
!!! TTTTTTTTACGGTGTCTCCG+TGG + Chr2:45373801-45373820 None:intergenic 40.0%
AATGGAAGTGGCCATGGAAA+CGG + Chr2:45373685-45373704 None:intergenic 45.0%
ACAATGATCCAGGTCGAACA+TGG - Chr2:45376678-45376697 MsG0280009103.01.T01:intron 45.0%
AGCTTGAGAAAGGTAGAAGG+AGG - Chr2:45376527-45376546 MsG0280009103.01.T01:intron 45.0%
AGGGTAGTTGTGGATGTTGA+AGG + Chr2:45373760-45373779 None:intergenic 45.0%
AGTAAAAAAAAGGGCAGCCC+GGG - Chr2:45377024-45377043 MsG0280009103.01.T01:intron 45.0%
CAAGTAGGACTGATCACAAG+TGG + Chr2:45377381-45377400 None:intergenic 45.0%
CAGAAATATAGGCAGGTGCA+AGG + Chr2:45376311-45376330 None:intergenic 45.0%
CCAAAAGTCCTGGGAAATTG+AGG + Chr2:45375324-45375343 None:intergenic 45.0%
CCCAGCAACATCATTAAAGC+CGG + Chr2:45375966-45375985 None:intergenic 45.0%
CCCTTATCATCAAAGAGGTG+AGG + Chr2:45373924-45373943 None:intergenic 45.0%
CTACAACTTGCACCACTTTC+CGG - Chr2:45373721-45373740 MsG0280009103.01.T01:three_prime_UTR 45.0%
CTGCTCTAACCCATCTATCA+GGG + Chr2:45377247-45377266 None:intergenic 45.0%
CTGTTCATTCTTGCATCCCT+AGG + Chr2:45376367-45376386 None:intergenic 45.0%
CTTACATGCATGCCTCTTGA+TGG - Chr2:45377453-45377472 MsG0280009103.01.T01:intron 45.0%
GACAAGCTATCTGGGAATAC+CGG - Chr2:45375944-45375963 MsG0280009103.01.T01:intron 45.0%
GATGCGACCTTAATTGCAGT+AGG - Chr2:45375202-45375221 MsG0280009103.01.T01:intron 45.0%
GCAAGTTGTAGGAAATGGGT+GGG + Chr2:45373712-45373731 None:intergenic 45.0%
GCGTACAATACACCAATTGG+TGG + Chr2:45376944-45376963 None:intergenic 45.0%
GCTGCGTACAATACACCAAT+TGG + Chr2:45376947-45376966 None:intergenic 45.0%
GCTTCCATGGAAACCAGAAT+TGG - Chr2:45375013-45375032 MsG0280009103.01.T01:intron 45.0%
GGAGGATATTGTTCGCGAAA+AGG - Chr2:45376586-45376605 MsG0280009103.01.T01:CDS 45.0%
GTAAAAAAAAAGGGCAGCCC+GGG - Chr2:45376904-45376923 MsG0280009103.01.T01:CDS 45.0%
GTAGTTGTGGATGTTGAAGG+CGG + Chr2:45373757-45373776 None:intergenic 45.0%
GTCAAGTGACTGAAAGGTCA+CGG + Chr2:45377131-45377150 None:intergenic 45.0%
GTCACTCCCCTTAGAAAACA+AGG + Chr2:45376812-45376831 None:intergenic 45.0%
GTGGTGCAAGTTGTAGGAAA+TGG + Chr2:45373717-45373736 None:intergenic 45.0%
GTTTAGTGGAAAACCCATGG+AGG - Chr2:45376568-45376587 MsG0280009103.01.T01:CDS 45.0%
TAATCTCTAATGGGGAGCCT+TGG + Chr2:45377172-45377191 None:intergenic 45.0%
TCAAGTGACTGAAAGGTCAC+GGG + Chr2:45377130-45377149 None:intergenic 45.0%
TCGACCTGGATCATTGTAAC+GGG + Chr2:45376675-45376694 None:intergenic 45.0%
TCGATGGCTTGAGTGAATAC+AGG + Chr2:45376131-45376150 None:intergenic 45.0%
TCGCGAACAATATCCTCCAT+GGG + Chr2:45376584-45376603 None:intergenic 45.0%
TCTGCTCTAACCCATCTATC+AGG + Chr2:45377248-45377267 None:intergenic 45.0%
TGCAAGTTGTAGGAAATGGG+TGG + Chr2:45373713-45373732 None:intergenic 45.0%
TGGGACACACTTAATGCTAG+TGG - Chr2:45374470-45374489 MsG0280009103.01.T01:intron 45.0%
TTCGCGAACAATATCCTCCA+TGG + Chr2:45376585-45376604 None:intergenic 45.0%
! ACCGGCTTTAATGATGTTGC+TGG - Chr2:45375962-45375981 MsG0280009103.01.T01:CDS 45.0%
! CCGGCTTTAATGATGTTGCT+GGG - Chr2:45375963-45375982 MsG0280009103.01.T01:CDS 45.0%
! CCTCAATTTCCCAGGACTTT+TGG - Chr2:45375321-45375340 MsG0280009103.01.T01:CDS 45.0%
!! AAAATCGGCTTGTAGAGCGA+GGG - Chr2:45377622-45377641 MsG0280009103.01.T01:intron 45.0%
!! TAAAATCGGCTTGTAGAGCG+AGG - Chr2:45377621-45377640 MsG0280009103.01.T01:intron 45.0%
!! TGGCAAGTTTTGTAGCCATG+TGG - Chr2:45375076-45375095 MsG0280009103.01.T01:intron 45.0%
!!! CCAGAGCCTTGTTTTCTAAG+GGG - Chr2:45376803-45376822 MsG0280009103.01.T01:intron 45.0%
!!! GCCAGAGCCTTGTTTTCTAA+GGG - Chr2:45376802-45376821 MsG0280009103.01.T01:intron 45.0%
!!! TTGTATAATTTTTTTTTTTT+TGG - Chr2:45374831-45374850 MsG0280009103.01.T01:intron 5.0%
AATGGGGAGCCTTGGCATAA+CGG + Chr2:45377164-45377183 None:intergenic 50.0%
AGCCTCAGTTTCAGCTGCAT+TGG - Chr2:45374054-45374073 MsG0280009103.01.T01:exon 50.0%
AGGAAATGGGTGGGAGAGAA+TGG + Chr2:45373703-45373722 None:intergenic 50.0%
ATGAAGGACCATGTTCGACC+TGG + Chr2:45376689-45376708 None:intergenic 50.0%
CATCGGTATCTTCTCTGCTG+TGG + Chr2:45376102-45376121 None:intergenic 50.0%
CATTACCACGTGTCGTACAC+TGG + Chr2:45374670-45374689 None:intergenic 50.0%
CCCCTTAGAAAACAAGGCTC+TGG + Chr2:45376806-45376825 None:intergenic 50.0%
CGGAAAGTGGTGCAAGTTGT+AGG + Chr2:45373723-45373742 None:intergenic 50.0%
CTGATCACAAGTGGTCTGTC+TGG + Chr2:45377372-45377391 None:intergenic 50.0%
CTTGCCCGTTACAATGATCC+AGG - Chr2:45376668-45376687 MsG0280009103.01.T01:intron 50.0%
GAAGAAGTGGAGGGTAGTTG+TGG + Chr2:45373770-45373789 None:intergenic 50.0%
GCCTCAGTTTCAGCTGCATT+GGG - Chr2:45374055-45374074 MsG0280009103.01.T01:exon 50.0%
TCAGCTGCATTGGGCTAAAC+CGG - Chr2:45374064-45374083 MsG0280009103.01.T01:CDS 50.0%
! TAACGGGCAAGCAAACAACC+AGG + Chr2:45376659-45376678 None:intergenic 50.0%
! TTTTTACGGTGTCTCCGTGG+TGG + Chr2:45373798-45373817 None:intergenic 50.0%
!!! GGCCAGAGCCTTGTTTTCTA+AGG - Chr2:45376801-45376820 MsG0280009103.01.T01:intron 50.0%
CAATTGGTGGGAGCCTTTCC+AGG + Chr2:45376931-45376950 None:intergenic 55.0%
CACTTCTTCTCCAGCCACCA+CGG - Chr2:45373781-45373800 MsG0280009103.01.T01:three_prime_UTR 55.0%
CATGTCCAGTGTACGACACG+TGG - Chr2:45374662-45374681 MsG0280009103.01.T01:intron 55.0%
CTGGAAAGGCTCCCACCAAT+TGG - Chr2:45376929-45376948 MsG0280009103.01.T01:CDS 55.0%
GCAAGCAAACAACCAGGCTG+AGG + Chr2:45376653-45376672 None:intergenic 55.0%
GCAGGTGCAAGGCACAAACA+TGG + Chr2:45376300-45376319 None:intergenic 55.0%
GCCCAATGCAGCTGAAACTG+AGG + Chr2:45374059-45374078 None:intergenic 55.0%
GGAGAGAATGGAAGTGGCCA+TGG + Chr2:45373691-45373710 None:intergenic 55.0%
GTGGCTGGAGAAGAAGTGGA+GGG + Chr2:45373779-45373798 None:intergenic 55.0%
GTTGTGGATGTTGAAGGCGG+AGG + Chr2:45373754-45373773 None:intergenic 55.0%
TGGATGTTGAAGGCGGAGGT+TGG + Chr2:45373750-45373769 None:intergenic 55.0%
TGGGTGGGAGAGAATGGAAG+TGG + Chr2:45373697-45373716 None:intergenic 55.0%
! GATGGTCTGAAACCTCAGCC+TGG - Chr2:45376638-45376657 MsG0280009103.01.T01:intron 55.0%
CGTGGTGGCTGGAGAAGAAG+TGG + Chr2:45373783-45373802 None:intergenic 60.0%
GGTGGCTGGAGAAGAAGTGG+AGG + Chr2:45373780-45373799 None:intergenic 60.0%
AAAAAGGGCAGCCCGGGTCC+TGG - Chr2:45376910-45376929 MsG0280009103.01.T01:CDS 65.0%
GTGGGAGCCTTTCCAGGACC+CGG + Chr2:45376925-45376944 None:intergenic 65.0%
TACGGTGTCTCCGTGGTGGC+TGG + Chr2:45373794-45373813 None:intergenic 65.0%
TGGGAGCCTTTCCAGGACCC+GGG + Chr2:45376924-45376943 None:intergenic 65.0%
! GGAGGTTGGTCGCCGGAAAG+TGG + Chr2:45373736-45373755 None:intergenic 65.0%
! TGAAGGCGGAGGTTGGTCGC+CGG + Chr2:45373743-45373762 None:intergenic 65.0%
GGGCAGCCCGGGTCCTGGAA+AGG - Chr2:45376915-45376934 MsG0280009103.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 45373661 45378281 45373661 ID=MsG0280009103.01;Name=MsG0280009103.01
Chr2 mRNA 45373661 45378281 45373661 ID=MsG0280009103.01.T01;Parent=MsG0280009103.01;Name=MsG0280009103.01.T01;_AED=0.50;_eAED=0.54;_QI=29|0.71|0.75|1|0.85|0.75|8|399|428
Chr2 exon 45377857 45378281 45377857 ID=MsG0280009103.01.T01:exon:7722;Parent=MsG0280009103.01.T01
Chr2 exon 45376845 45376982 45376845 ID=MsG0280009103.01.T01:exon:7723;Parent=MsG0280009103.01.T01
Chr2 exon 45376539 45376607 45376539 ID=MsG0280009103.01.T01:exon:7724;Parent=MsG0280009103.01.T01
Chr2 exon 45376243 45376428 45376243 ID=MsG0280009103.01.T01:exon:7725;Parent=MsG0280009103.01.T01
Chr2 exon 45375958 45376040 45375958 ID=MsG0280009103.01.T01:exon:7726;Parent=MsG0280009103.01.T01
Chr2 exon 45375732 45375863 45375732 ID=MsG0280009103.01.T01:exon:7727;Parent=MsG0280009103.01.T01
Chr2 exon 45375206 45375443 45375206 ID=MsG0280009103.01.T01:exon:7728;Parent=MsG0280009103.01.T01
Chr2 exon 45373661 45374104 45373661 ID=MsG0280009103.01.T01:exon:7729;Parent=MsG0280009103.01.T01
Chr2 five_prime_UTR 45378253 45378281 45378253 ID=MsG0280009103.01.T01:five_prime_utr;Parent=MsG0280009103.01.T01
Chr2 CDS 45377857 45378252 45377857 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45376845 45376982 45376845 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45376539 45376607 45376539 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45376243 45376428 45376243 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45375958 45376040 45375958 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45375732 45375863 45375732 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45375206 45375443 45375206 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 CDS 45374060 45374104 45374060 ID=MsG0280009103.01.T01:cds;Parent=MsG0280009103.01.T01
Chr2 three_prime_UTR 45373661 45374059 45373661 ID=MsG0280009103.01.T01:three_prime_utr;Parent=MsG0280009103.01.T01
Gene Sequence

>MsG0280009103.01.T01

ATGGCCACTTCCATTCTCTCCCACCCATTTCCTACAACTTGCACCACTTTCCGGCGACCAACCTCCGCCTTCAACATCCACAACTACCCTCCACTTCTTCTCCAGCCACCACGGAGACACCGTAAAAAAAATCACATTAAATGGGCCATTAATCTGAGCTTAGTTGAACAGAGTACACAAAAATCGAGTTTTGATTTGCAGCAACTTGTTGCGTTTCTTTACGACGATCTTCCTCACCTCTTTGATGATAAGGGTATTGATAAAAATGCTTATGATGAACGTGTCTTCTTTCGTGACCCAATTACTAAGCATGATGATTTGAGTGGTTATCTTTTCAACATTGCTCTTCTTAAGACAATCTTTAAGCCTCAGTTTCAGCTGCATTGGGCTAAACCGACAGGACCTTATGAAATAACTACAAGATGGACCATGGTTATGAAATTCATGCTGCTTCCATGGAAACCAGAATTGGTCTTTACAGGAACATCTGTTATGGGTGTTAACCCAGAAAATGGCAAGTTTTGTAGCCATGTGGACTTTTGGGATTCACTAAAGAAAAATGACTATTTTTCATTTGAAGGTTTATTGGAAGTATTCAAACAGTTGAGGATTTACAAGACACCAGATTTGGAATCACCCAAATATCAAATATTAAAACGGACAGCAAATTATGAGGTCAACCTTCTCATTCATGAACATAGTGTTTTTTGTATTGATATAATTAAAATTTATCTTTATTCTGCTATTCTGTTATGCAATGAAATTTTGCATGAATGCTCATATCAAAAGGTTAGACAGTATGATCCATTCGTAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGAATACCGGCTTTAATGATGTTGCTGGGTATATATTTGGAAAGAATTCCACAGCAGAGAAGATACCGATGACTACTCCTGTATTCACTCAAGCCATCGATATTGACTTGTCCAAAGTCTCAATCCAAATAGTTCTTCCATCAGACAAAGAAACAAAGAGTTTACCAAATCCTAATCAAGAAACAGTTAGCTTGAGAAAGGTAGAAGGAGGCATTGCTGCAGTAATAAAGTTTAGTGGAAAACCCATGGAGGATATTGTTCGCGAAAAGGAGAAAATTTTACGCTCCAATATCATTAAAGATGGTCTGAAACCTCAGCCTGGTTGTTTGCTTGCCCGTTACAATGATCCAGGTCGAACATGGTCCTTCATAATGGTATGCTGCGAAACCTTCTTGATTAGGAATGAAGTGCTCATTTGGCTAGATGACTTCTCATTGGATTAG

Protein sequence

>MsG0280009103.01.T01

MATSILSHPFPTTCTTFRRPTSAFNIHNYPPLLLQPPRRHRKKNHIKWAINLSLVEQSTQKSSFDLQQLVAFLYDDLPHLFDDKGIDKNAYDERVFFRDPITKHDDLSGYLFNIALLKTIFKPQFQLHWAKPTGPYEITTRWTMVMKFMLLPWKPELVFTGTSVMGVNPENGKFCSHVDFWDSLKKNDYFSFEGLLEVFKQLRIYKTPDLESPKYQILKRTANYEVNLLIHEHSVFCIDIIKIYLYSAILLCNEILHECSYQKVRQYDPFVVVETNGDKLSGNTGFNDVAGYIFGKNSTAEKIPMTTPVFTQAIDIDLSKVSIQIVLPSDKETKSLPNPNQETVSLRKVEGGIAAVIKFSGKPMEDIVREKEKILRSNIIKDGLKPQPGCLLARYNDPGRTWSFIMVCCETFLIRNEVLIWLDDFSLD*