Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024455.01.T01 | XP_003611203.1 | 97.91 | 335 | 7 | 0 | 41 | 375 | 162 | 496 | 0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024455.01.T01 | Q9LQ10 | 63.174 | 334 | 121 | 2 | 42 | 373 | 219 | 552 | 7.81E-156 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024455.01.T01 | G7KEV4 | 97.910 | 335 | 7 | 0 | 41 | 375 | 162 | 496 | 0.0 | 685 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048506.01 | MsG0580024455.01 | -0.801515 | 8.684232e-49 | 4.155277e-46 |
| MsG0080048528.01 | MsG0580024455.01 | 0.847153 | 1.384809e-59 | 2.439180e-56 |
| MsG0080048780.01 | MsG0580024455.01 | 0.800949 | 1.133653e-48 | 5.347670e-46 |
| MsG0080048845.01 | MsG0580024455.01 | 0.828429 | 9.034046e-55 | 8.977612e-52 |
| MsG0080048929.01 | MsG0580024455.01 | 0.804991 | 1.655863e-49 | 8.660424e-47 |
| MsG0080048987.01 | MsG0580024455.01 | 0.807236 | 5.577469e-50 | 3.090334e-47 |
| MsG0080049130.01 | MsG0580024455.01 | 0.815642 | 8.328463e-52 | 5.774492e-49 |
| MsG0180000017.01 | MsG0580024455.01 | 0.810735 | 9.942513e-51 | 6.041024e-48 |
| MsG0180000352.01 | MsG0580024455.01 | 0.813104 | 3.030243e-51 | 1.960815e-48 |
| MsG0180000549.01 | MsG0580024455.01 | 0.872291 | 3.559987e-67 | 1.481436e-63 |
| MsG0180000638.01 | MsG0580024455.01 | 0.810405 | 1.171739e-50 | 7.056606e-48 |
| MsG0180000708.01 | MsG0580024455.01 | 0.830805 | 2.388464e-55 | 2.543780e-52 |
| MsG0180000843.01 | MsG0580024455.01 | 0.806821 | 6.829428e-50 | 3.743444e-47 |
| MsG0180001664.01 | MsG0580024455.01 | 0.828492 | 8.722494e-55 | 8.683923e-52 |
| MsG0180001685.01 | MsG0580024455.01 | 0.828836 | 7.203502e-55 | 7.242660e-52 |
| MsG0180001929.01 | MsG0580024455.01 | 0.816019 | 6.862770e-52 | 4.807474e-49 |
| MsG0180002671.01 | MsG0580024455.01 | 0.832995 | 6.875539e-56 | 7.814317e-53 |
| MsG0180002902.01 | MsG0580024455.01 | 0.819079 | 1.401983e-52 | 1.068147e-49 |
| MsG0180003442.01 | MsG0580024455.01 | 0.818247 | 2.165437e-52 | 1.612295e-49 |
| MsG0180003453.01 | MsG0580024455.01 | 0.822054 | 2.908827e-53 | 2.408003e-50 |
| MsG0180004017.01 | MsG0580024455.01 | 0.812351 | 4.429690e-51 | 2.809970e-48 |
| MsG0180004106.01 | MsG0580024455.01 | 0.823603 | 1.267334e-53 | 1.096319e-50 |
| MsG0180004458.01 | MsG0580024455.01 | 0.829850 | 4.086975e-55 | 4.234185e-52 |
| MsG0180004518.01 | MsG0580024455.01 | 0.828656 | 7.963082e-55 | 7.965420e-52 |
| MsG0180004733.01 | MsG0580024455.01 | 0.814400 | 1.571022e-51 | 1.053090e-48 |
| MsG0180005087.01 | MsG0580024455.01 | 0.812672 | 3.768076e-51 | 2.410615e-48 |
| MsG0180005276.01 | MsG0580024455.01 | 0.830835 | 2.348057e-55 | 2.502961e-52 |
| MsG0180005283.01 | MsG0580024455.01 | 0.828704 | 7.754515e-55 | 7.767305e-52 |
| MsG0180005568.01 | MsG0580024455.01 | 0.804191 | 2.431434e-49 | 1.245695e-46 |
| MsG0180005612.01 | MsG0580024455.01 | 0.807925 | 3.983954e-50 | 2.247233e-47 |
| MsG0180005760.01 | MsG0580024455.01 | 0.826454 | 2.689284e-54 | 2.523206e-51 |
| MsG0180006042.01 | MsG0580024455.01 | 0.802027 | 6.814909e-49 | 3.303516e-46 |
| MsG0180006159.01 | MsG0580024455.01 | 0.804044 | 2.609430e-49 | 1.331898e-46 |
| MsG0180006200.01 | MsG0580024455.01 | 0.803234 | 3.842574e-49 | 1.920833e-46 |
| MsG0180006223.01 | MsG0580024455.01 | 0.809733 | 1.635214e-50 | 9.676801e-48 |
| MsG0280006400.01 | MsG0580024455.01 | 0.828246 | 1.000332e-54 | 9.887139e-52 |
| MsG0280010803.01 | MsG0580024455.01 | 0.808660 | 2.777512e-50 | 1.597244e-47 |
| MsG0280010998.01 | MsG0580024455.01 | 0.843393 | 1.440754e-58 | 2.251222e-55 |
| MsG0280011309.01 | MsG0580024455.01 | 0.815509 | 8.915551e-52 | 6.159058e-49 |
| MsG0380011739.01 | MsG0580024455.01 | 0.817099 | 3.931123e-52 | 2.836308e-49 |
| MsG0380012782.01 | MsG0580024455.01 | 0.831001 | 2.137602e-55 | 2.289831e-52 |
| MsG0380013499.01 | MsG0580024455.01 | 0.816503 | 5.347141e-52 | 3.795462e-49 |
| MsG0380013530.01 | MsG0580024455.01 | 0.830972 | 2.173258e-55 | 2.325986e-52 |
| MsG0380014386.01 | MsG0580024455.01 | 0.821072 | 4.902537e-53 | 3.948502e-50 |
| MsG0380014411.01 | MsG0580024455.01 | 0.822249 | 2.620256e-53 | 2.181375e-50 |
| MsG0380014465.01 | MsG0580024455.01 | 0.823745 | 1.174148e-53 | 1.019906e-50 |
| MsG0380014470.01 | MsG0580024455.01 | 0.822063 | 2.894827e-53 | 2.396948e-50 |
| MsG0380014510.01 | MsG0580024455.01 | 0.851039 | 1.150393e-60 | 2.298329e-57 |
| MsG0380014728.01 | MsG0580024455.01 | 0.830991 | 2.149808e-55 | 2.302229e-52 |
| MsG0380014795.01 | MsG0580024455.01 | 0.809680 | 1.678551e-50 | 9.919203e-48 |
| MsG0380014909.01 | MsG0580024455.01 | 0.806610 | 7.566129e-50 | 4.124674e-47 |
| MsG0480018592.01 | MsG0580024455.01 | 0.840511 | 8.322814e-58 | 1.188245e-54 |
| MsG0480018658.01 | MsG0580024455.01 | 0.808628 | 2.820510e-50 | 1.620644e-47 |
| MsG0480018951.01 | MsG0580024455.01 | 0.806847 | 6.741941e-50 | 3.698107e-47 |
| MsG0480019485.01 | MsG0580024455.01 | 0.824215 | 9.106811e-54 | 8.015282e-51 |
| MsG0480019501.01 | MsG0580024455.01 | 0.834228 | 3.384467e-56 | 3.990907e-53 |
| MsG0480019604.01 | MsG0580024455.01 | 0.824526 | 7.695009e-54 | 6.833369e-51 |
| MsG0480019641.01 | MsG0580024455.01 | 0.807217 | 5.629772e-50 | 3.117747e-47 |
| MsG0480019752.01 | MsG0580024455.01 | 0.812488 | 4.133618e-51 | 2.631830e-48 |
| MsG0480020151.01 | MsG0580024455.01 | 0.865972 | 4.004804e-65 | 1.327885e-61 |
| MsG0480020229.01 | MsG0580024455.01 | 0.848143 | 7.395022e-60 | 1.343986e-56 |
| MsG0480020350.01 | MsG0580024455.01 | 0.834726 | 2.537820e-56 | 3.037224e-53 |
| MsG0480020473.01 | MsG0580024455.01 | 0.809200 | 2.128337e-50 | 1.241757e-47 |
| MsG0480021101.01 | MsG0580024455.01 | 0.807201 | 5.674911e-50 | 3.141419e-47 |
| MsG0480021168.01 | MsG0580024455.01 | 0.822893 | 1.856762e-53 | 1.574315e-50 |
| MsG0480021308.01 | MsG0580024455.01 | 0.801460 | 8.910697e-49 | 4.257778e-46 |
| MsG0480021420.01 | MsG0580024455.01 | 0.800205 | 1.607692e-48 | 7.441532e-46 |
| MsG0480021597.01 | MsG0580024455.01 | 0.852578 | 4.211399e-61 | 8.838816e-58 |
| MsG0480021668.01 | MsG0580024455.01 | 0.803007 | 4.280733e-49 | 2.127388e-46 |
| MsG0480021893.01 | MsG0580024455.01 | 0.801485 | 8.805041e-49 | 4.210003e-46 |
| MsG0480022088.01 | MsG0580024455.01 | 0.823022 | 1.731892e-53 | 1.473921e-50 |
| MsG0480022411.01 | MsG0580024455.01 | 0.801288 | 9.664752e-49 | 4.598127e-46 |
| MsG0480022458.01 | MsG0580024455.01 | 0.817046 | 4.040026e-52 | 2.910828e-49 |
| MsG0480022622.01 | MsG0580024455.01 | 0.840366 | 9.078474e-58 | 1.290323e-54 |
| MsG0480022664.01 | MsG0580024455.01 | 0.804529 | 2.068302e-49 | 1.068870e-46 |
| MsG0480022918.01 | MsG0580024455.01 | 0.804677 | 1.925750e-49 | 9.990725e-47 |
| MsG0480023148.01 | MsG0580024455.01 | 0.815083 | 1.108759e-51 | 7.570084e-49 |
| MsG0480023166.01 | MsG0580024455.01 | 0.831682 | 1.453729e-55 | 1.589084e-52 |
| MsG0480023351.01 | MsG0580024455.01 | 0.810714 | 1.004956e-50 | 6.102623e-48 |
| MsG0480023422.01 | MsG0580024455.01 | 0.827708 | 1.347340e-54 | 1.310960e-51 |
| MsG0480023459.01 | MsG0580024455.01 | -0.811478 | 6.863868e-51 | 4.253360e-48 |
| MsG0480023469.01 | MsG0580024455.01 | 0.810740 | 9.919449e-51 | 6.027803e-48 |
| MsG0480023483.01 | MsG0580024455.01 | 0.808905 | 2.461212e-50 | 1.424535e-47 |
| MsG0480023650.01 | MsG0580024455.01 | 0.800530 | 1.380034e-48 | 6.440819e-46 |
| MsG0480023821.01 | MsG0580024455.01 | 0.867534 | 1.274923e-65 | 4.466424e-62 |
| MsG0480023845.01 | MsG0580024455.01 | 0.802942 | 4.416024e-49 | 2.191061e-46 |
| MsG0580024340.01 | MsG0580024455.01 | 0.841312 | 5.130037e-58 | 7.507433e-55 |
| MsG0580024360.01 | MsG0580024455.01 | 0.823774 | 1.155537e-53 | 1.004583e-50 |
| MsG0580024385.01 | MsG0580024455.01 | 0.829286 | 5.604114e-55 | 5.711296e-52 |
| MsG0580024455.01 | MsG0580024608.01 | 0.817774 | 2.769475e-52 | 2.035607e-49 |
| MsG0580024455.01 | MsG0580024759.01 | 0.825209 | 5.309836e-54 | 4.808612e-51 |
| MsG0580024455.01 | MsG0580024836.01 | 0.850945 | 1.223134e-60 | 2.436203e-57 |
| MsG0580024455.01 | MsG0580024944.01 | 0.818811 | 1.613331e-52 | 1.220083e-49 |
| MsG0580024455.01 | MsG0580024950.01 | 0.818738 | 1.675842e-52 | 1.264856e-49 |
| MsG0580024455.01 | MsG0580024976.01 | -0.840634 | 7.725409e-58 | 1.107097e-54 |
| MsG0580024455.01 | MsG0580025294.01 | 0.808017 | 3.807502e-50 | 2.153000e-47 |
| MsG0580024455.01 | MsG0580025301.01 | 0.807411 | 5.120930e-50 | 2.850359e-47 |
| MsG0580024455.01 | MsG0580025373.01 | 0.813929 | 1.995467e-51 | 1.320547e-48 |
| MsG0580024455.01 | MsG0580025513.01 | 0.807425 | 5.086164e-50 | 2.831989e-47 |
| MsG0580024455.01 | MsG0580025589.01 | 0.833161 | 6.251680e-56 | 7.140180e-53 |
| MsG0580024455.01 | MsG0580026156.01 | 0.810476 | 1.131073e-50 | 6.824828e-48 |
| MsG0580024455.01 | MsG0580026211.01 | 0.821417 | 4.082406e-53 | 3.319370e-50 |
| MsG0580024455.01 | MsG0580026291.01 | 0.808370 | 3.202502e-50 | 1.827915e-47 |
| MsG0580024455.01 | MsG0580026298.01 | 0.828190 | 1.031515e-54 | 1.017947e-51 |
| MsG0580024455.01 | MsG0580027098.01 | 0.807190 | 5.704988e-50 | 3.157168e-47 |
| MsG0580024455.01 | MsG0580027348.01 | 0.821675 | 3.559557e-53 | 2.915250e-50 |
| MsG0580024455.01 | MsG0580027394.01 | 0.800617 | 1.325157e-48 | 6.198375e-46 |
| MsG0580024455.01 | MsG0580027845.01 | 0.820380 | 7.072299e-53 | 5.587357e-50 |
| MsG0580024455.01 | MsG0580027979.01 | 0.809272 | 2.054015e-50 | 1.200660e-47 |
| MsG0580024455.01 | MsG0580028092.01 | 0.812733 | 3.655023e-51 | 2.342058e-48 |
| MsG0580024455.01 | MsG0580028093.01 | 0.846009 | 2.843276e-59 | 4.826732e-56 |
| MsG0580024455.01 | MsG0580028306.01 | 0.802122 | 6.516336e-49 | 3.166396e-46 |
| MsG0580024455.01 | MsG0580028495.01 | 0.806896 | 6.583991e-50 | 3.615819e-47 |
| MsG0580024455.01 | MsG0580028552.01 | 0.803277 | 3.764679e-49 | 1.884001e-46 |
| MsG0580024455.01 | MsG0580029394.01 | 0.810049 | 1.398189e-50 | 8.342796e-48 |
| MsG0580024455.01 | MsG0580029967.01 | 0.806929 | 6.478594e-50 | 3.561066e-47 |
| MsG0580024455.01 | MsG0680030514.01 | 0.816919 | 4.313845e-52 | 3.097249e-49 |
| MsG0580024455.01 | MsG0680030516.01 | 0.820692 | 5.995918e-53 | 4.777560e-50 |
| MsG0580024455.01 | MsG0680030627.01 | 0.812380 | 4.365111e-51 | 2.771133e-48 |
| MsG0580024455.01 | MsG0680030858.01 | 0.814026 | 1.900153e-51 | 1.260807e-48 |
| MsG0580024455.01 | MsG0680030957.01 | 0.806859 | 6.702116e-50 | 3.677384e-47 |
| MsG0580024455.01 | MsG0680031996.01 | 0.807526 | 4.841582e-50 | 2.702902e-47 |
| MsG0580024455.01 | MsG0680031997.01 | 0.821782 | 3.362139e-53 | 2.762037e-50 |
| MsG0580024455.01 | MsG0680032000.01 | 0.820104 | 8.180391e-53 | 6.414003e-50 |
| MsG0580024455.01 | MsG0680032002.01 | 0.803902 | 2.792268e-49 | 1.420096e-46 |
| MsG0580024455.01 | MsG0680032003.01 | 0.804108 | 2.530170e-49 | 1.293560e-46 |
| MsG0580024455.01 | MsG0680032006.01 | 0.834255 | 3.330604e-56 | 3.931081e-53 |
| MsG0580024455.01 | MsG0680032160.01 | 0.843135 | 1.687644e-58 | 2.615046e-55 |
| MsG0580024455.01 | MsG0680032496.01 | 0.805608 | 1.229741e-49 | 6.534321e-47 |
| MsG0580024455.01 | MsG0680035619.01 | 0.829967 | 3.826065e-55 | 3.976658e-52 |
| MsG0580024455.01 | MsG0680035731.01 | 0.814233 | 1.710349e-51 | 1.141251e-48 |
| MsG0580024455.01 | MsG0780036509.01 | 0.837240 | 5.841717e-57 | 7.541640e-54 |
| MsG0580024455.01 | MsG0780036881.01 | 0.837415 | 5.267477e-57 | 6.837212e-54 |
| MsG0580024455.01 | MsG0780037184.01 | 0.809889 | 1.513867e-50 | 8.994804e-48 |
| MsG0580024455.01 | MsG0780037351.01 | 0.821938 | 3.093313e-53 | 2.552368e-50 |
| MsG0580024455.01 | MsG0780037363.01 | 0.824635 | 7.253837e-54 | 6.462617e-51 |
| MsG0580024455.01 | MsG0780037734.01 | 0.801627 | 8.236621e-49 | 3.952128e-46 |
| MsG0580024455.01 | MsG0780039161.01 | 0.804046 | 2.606757e-49 | 1.330608e-46 |
| MsG0580024455.01 | MsG0780039230.01 | 0.807393 | 5.168149e-50 | 2.875241e-47 |
| MsG0580024455.01 | MsG0780039795.01 | 0.801361 | 9.337086e-49 | 4.450439e-46 |
| MsG0580024455.01 | MsG0780039984.01 | -0.821056 | 4.944474e-53 | 3.980590e-50 |
| MsG0580024455.01 | MsG0780039986.01 | 0.803486 | 3.407563e-49 | 1.714496e-46 |
| MsG0580024455.01 | MsG0780039988.01 | 0.818414 | 1.984819e-52 | 1.484859e-49 |
| MsG0580024455.01 | MsG0780040158.01 | 0.830413 | 2.978255e-55 | 3.135549e-52 |
| MsG0580024455.01 | MsG0780040159.01 | 0.810405 | 1.171593e-50 | 7.055829e-48 |
| MsG0580024455.01 | MsG0780040319.01 | 0.835824 | 1.339903e-56 | 1.657538e-53 |
| MsG0580024455.01 | MsG0780040343.01 | 0.835327 | 1.789701e-56 | 2.181511e-53 |
| MsG0580024455.01 | MsG0780040412.01 | 0.818732 | 1.681572e-52 | 1.268939e-49 |
| MsG0580024455.01 | MsG0780040441.01 | 0.807067 | 6.057971e-50 | 3.341738e-47 |
| MsG0580024455.01 | MsG0780040884.01 | 0.801869 | 7.347152e-49 | 3.547309e-46 |
| MsG0580024455.01 | MsG0780041035.01 | 0.825752 | 3.948610e-54 | 3.631526e-51 |
| MsG0580024455.01 | MsG0780041159.01 | 0.803097 | 4.102302e-49 | 2.043381e-46 |
| MsG0580024455.01 | MsG0780041272.01 | 0.810923 | 9.054955e-51 | 5.529662e-48 |
| MsG0580024455.01 | MsG0780041289.01 | 0.852519 | 4.377773e-61 | 9.170870e-58 |
| MsG0580024455.01 | MsG0780041385.01 | 0.853307 | 2.605123e-61 | 5.603918e-58 |
| MsG0580024455.01 | MsG0780041474.01 | 0.808918 | 2.445988e-50 | 1.416210e-47 |
| MsG0580024455.01 | MsG0780041706.01 | 0.863556 | 2.288711e-64 | 6.966387e-61 |
| MsG0580024455.01 | MsG0780041778.01 | 0.858180 | 9.829148e-63 | 2.487020e-59 |
| MsG0580024455.01 | MsG0880042043.01 | 0.816300 | 5.936212e-52 | 4.190724e-49 |
| MsG0580024455.01 | MsG0880042343.01 | 0.822817 | 1.933865e-53 | 1.636197e-50 |
| MsG0580024455.01 | MsG0880043107.01 | 0.801136 | 1.038299e-48 | 4.921121e-46 |
| MsG0580024455.01 | MsG0880043235.01 | 0.824999 | 5.953916e-54 | 5.359772e-51 |
| MsG0580024455.01 | MsG0880043250.01 | 0.803711 | 3.059708e-49 | 1.548328e-46 |
| MsG0580024455.01 | MsG0880043277.01 | 0.820298 | 7.384671e-53 | 5.820411e-50 |
| MsG0580024455.01 | MsG0880043278.01 | 0.826619 | 2.455660e-54 | 2.314852e-51 |
| MsG0580024455.01 | MsG0880044228.01 | 0.800196 | 1.614345e-48 | 7.470567e-46 |
| MsG0580024455.01 | MsG0880044488.01 | 0.815636 | 8.351548e-52 | 5.789706e-49 |
| MsG0580024455.01 | MsG0880044595.01 | 0.834441 | 2.992710e-56 | 3.551892e-53 |
| MsG0580024455.01 | MsG0880044619.01 | 0.830754 | 2.457563e-55 | 2.613422e-52 |
| MsG0580024455.01 | MsG0880044620.01 | 0.803764 | 2.983143e-49 | 1.511732e-46 |
| MsG0580024455.01 | MsG0880044625.01 | 0.833721 | 4.531516e-56 | 5.262748e-53 |
| MsG0580024455.01 | MsG0880044626.01 | 0.850636 | 1.494146e-60 | 2.945722e-57 |
| MsG0580024455.01 | MsG0880044629.01 | 0.827743 | 1.321810e-54 | 1.287415e-51 |
| MsG0580024455.01 | MsG0880045401.01 | 0.800070 | 1.712715e-48 | 7.900672e-46 |
| MsG0580024455.01 | MsG0880045402.01 | 0.809416 | 1.912418e-50 | 1.122237e-47 |
| MsG0580024455.01 | MsG0880045423.01 | 0.834637 | 2.671010e-56 | 3.188658e-53 |
| MsG0580024455.01 | MsG0880045648.01 | 0.841221 | 5.419565e-58 | 7.908968e-55 |
| MsG0580024455.01 | MsG0880045697.01 | 0.832614 | 8.547401e-56 | 9.603955e-53 |
| MsG0580024455.01 | MsG0880045709.01 | 0.819764 | 9.783793e-53 | 7.598177e-50 |
| MsG0580024455.01 | MsG0880045710.01 | 0.803447 | 3.470619e-49 | 1.744481e-46 |
| MsG0580024455.01 | MsG0880045927.01 | 0.822471 | 2.326881e-53 | 1.949487e-50 |
| MsG0580024455.01 | MsG0880046048.01 | 0.821905 | 3.149166e-53 | 2.596101e-50 |
| MsG0580024455.01 | MsG0880046051.01 | 0.874867 | 4.827721e-68 | 2.208744e-64 |
| MsG0580024455.01 | MsG0880046200.01 | 0.814386 | 1.581847e-51 | 1.059968e-48 |
| MsG0580024455.01 | MsG0880046252.01 | 0.868727 | 5.267658e-66 | 1.925860e-62 |
| MsG0580024455.01 | MsG0880046533.01 | 0.816437 | 5.534122e-52 | 3.921051e-49 |
| MsG0580024455.01 | MsG0880046791.01 | 0.830629 | 2.637509e-55 | 2.794307e-52 |
| MsG0580024455.01 | MsG0880047111.01 | 0.803960 | 2.715697e-49 | 1.383197e-46 |
| MsG0580024455.01 | MsG0880047112.01 | 0.817527 | 3.148223e-52 | 2.298246e-49 |
| MsG0580024455.01 | MsG0880047540.01 | 0.814405 | 1.566591e-51 | 1.050284e-48 |
| MsG0580024455.01 | MsG0880047578.01 | 0.821537 | 3.829536e-53 | 3.124178e-50 |
| MsG0580024455.01 | MsG0880047625.01 | 0.801849 | 7.414857e-49 | 3.578158e-46 |
| MsG0580024455.01 | MsG0880047669.01 | 0.802070 | 6.680143e-49 | 3.241734e-46 |
| MsG0580024455.01 | MsG0880047723.01 | 0.813238 | 2.832295e-51 | 1.839416e-48 |
| MsG0580024455.01 | MsG0880047770.01 | 0.809255 | 2.070912e-50 | 1.209987e-47 |
| MsG0380014936.01 | MsG0580024455.01 | 0.846474 | 2.122943e-59 | 3.658742e-56 |
| MsG0380015496.01 | MsG0580024455.01 | 0.804385 | 2.215887e-49 | 1.140949e-46 |
| MsG0380015501.01 | MsG0580024455.01 | 0.830657 | 2.595505e-55 | 2.752182e-52 |
| MsG0380015547.01 | MsG0580024455.01 | 0.800039 | 1.737836e-48 | 8.010084e-46 |
| MsG0380015921.01 | MsG0580024455.01 | 0.802822 | 4.674109e-49 | 2.312296e-46 |
| MsG0380016033.01 | MsG0580024455.01 | 0.804060 | 2.589657e-49 | 1.322379e-46 |
| MsG0380016042.01 | MsG0580024455.01 | 0.808473 | 3.043649e-50 | 1.741953e-47 |
| MsG0380016399.01 | MsG0580024455.01 | 0.837677 | 4.512687e-57 | 5.906058e-54 |
| MsG0380016452.01 | MsG0580024455.01 | 0.848918 | 4.511583e-60 | 8.409968e-57 |
| MsG0380016459.01 | MsG0580024455.01 | 0.802152 | 6.424904e-49 | 3.124415e-46 |
| MsG0380016542.01 | MsG0580024455.01 | 0.812051 | 5.148988e-51 | 3.239627e-48 |
| MsG0380016545.01 | MsG0580024455.01 | 0.807996 | 3.847028e-50 | 2.174183e-47 |
| MsG0380016549.01 | MsG0580024455.01 | 0.825310 | 5.026047e-54 | 4.564551e-51 |
| MsG0380016623.01 | MsG0580024455.01 | 0.827869 | 1.232852e-54 | 1.205228e-51 |
| MsG0380016658.01 | MsG0580024455.01 | 0.808766 | 2.636286e-50 | 1.520259e-47 |
| MsG0380016699.01 | MsG0580024455.01 | 0.805435 | 1.336613e-49 | 7.070863e-47 |
| MsG0380016987.01 | MsG0580024455.01 | 0.814726 | 1.330344e-51 | 8.996197e-49 |
| MsG0380017739.01 | MsG0580024455.01 | 0.816291 | 5.965691e-52 | 4.210512e-49 |
| MsG0380017762.01 | MsG0580024455.01 | 0.814908 | 1.212150e-51 | 8.236814e-49 |
| MsG0380017773.01 | MsG0580024455.01 | 0.840437 | 8.702120e-58 | 1.239465e-54 |
| MsG0380017976.01 | MsG0580024455.01 | 0.823929 | 1.063204e-53 | 9.282561e-51 |
| MsG0380018061.01 | MsG0580024455.01 | 0.801656 | 8.124702e-49 | 3.901323e-46 |
| MsG0480018089.01 | MsG0580024455.01 | 0.801516 | 8.680617e-49 | 4.153679e-46 |
| MsG0480018108.01 | MsG0580024455.01 | 0.828786 | 7.408924e-55 | 7.438560e-52 |
| MsG0480018323.01 | MsG0580024455.01 | 0.822385 | 2.436799e-53 | 2.036683e-50 |
| MsG0280006553.01 | MsG0580024455.01 | 0.811305 | 7.484029e-51 | 4.616135e-48 |
| MsG0280006706.01 | MsG0580024455.01 | 0.813610 | 2.345544e-51 | 1.538965e-48 |
| MsG0280006718.01 | MsG0580024455.01 | 0.817565 | 3.087236e-52 | 2.256084e-49 |
| MsG0280006825.01 | MsG0580024455.01 | 0.837449 | 5.162863e-57 | 6.709030e-54 |
| MsG0280007079.01 | MsG0580024455.01 | 0.845130 | 4.920531e-59 | 8.118456e-56 |
| MsG0280007102.01 | MsG0580024455.01 | 0.806867 | 6.676275e-50 | 3.663930e-47 |
| MsG0280007322.01 | MsG0580024455.01 | 0.809125 | 2.208373e-50 | 1.285851e-47 |
| MsG0280007561.01 | MsG0580024455.01 | 0.839468 | 1.556025e-57 | 2.150823e-54 |
| MsG0280007754.01 | MsG0580024455.01 | 0.874181 | 8.256717e-68 | 3.681208e-64 |
| MsG0280007800.01 | MsG0580024455.01 | 0.828471 | 8.827738e-55 | 8.782786e-52 |
| MsG0280007852.01 | MsG0580024455.01 | 0.804488 | 2.108651e-49 | 1.088603e-46 |
| MsG0280008227.01 | MsG0580024455.01 | 0.830997 | 2.142169e-55 | 2.294444e-52 |
| MsG0280008430.01 | MsG0580024455.01 | 0.806076 | 9.804314e-50 | 5.272597e-47 |
| MsG0280008922.01 | MsG0580024455.01 | 0.840557 | 8.095977e-58 | 1.157461e-54 |
| MsG0280009430.01 | MsG0580024455.01 | 0.801269 | 9.750635e-49 | 4.636797e-46 |
| MsG0280009431.01 | MsG0580024455.01 | 0.844110 | 9.259010e-59 | 1.479607e-55 |
| MsG0280009435.01 | MsG0580024455.01 | 0.816066 | 6.695603e-52 | 4.696624e-49 |
| MsG0280009436.01 | MsG0580024455.01 | 0.828476 | 8.801514e-55 | 8.758285e-52 |
| MsG0280009756.01 | MsG0580024455.01 | 0.825807 | 3.832133e-54 | 3.530034e-51 |
| MsG0280009960.01 | MsG0580024455.01 | 0.832881 | 7.337109e-56 | 8.309957e-53 |
| MsG0280010353.01 | MsG0580024455.01 | 0.827347 | 1.645224e-54 | 1.584303e-51 |
| MsG0280010356.01 | MsG0580024455.01 | 0.825658 | 4.157648e-54 | 3.813507e-51 |
| MsG0280010376.01 | MsG0580024455.01 | 0.810268 | 1.254237e-50 | 7.526487e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024455.01.T01 | MTR_5g011400 | 97.910 | 335 | 7 | 0 | 41 | 375 | 162 | 496 | 0.0 | 685 |
| MsG0580024455.01.T01 | MTR_6g463260 | 60.241 | 332 | 132 | 0 | 42 | 373 | 196 | 527 | 1.04e-156 | 451 |
| MsG0580024455.01.T01 | MTR_8g101750 | 45.122 | 328 | 179 | 1 | 41 | 367 | 95 | 422 | 1.54e-112 | 335 |
| MsG0580024455.01.T01 | MTR_6g091760 | 44.377 | 329 | 182 | 1 | 40 | 367 | 102 | 430 | 5.41e-111 | 332 |
| MsG0580024455.01.T01 | MTR_4g097540 | 42.899 | 338 | 183 | 3 | 40 | 367 | 93 | 430 | 7.08e-106 | 320 |
| MsG0580024455.01.T01 | MTR_5g015020 | 42.730 | 337 | 184 | 4 | 40 | 367 | 93 | 429 | 1.29e-102 | 311 |
| MsG0580024455.01.T01 | MTR_3g103550 | 44.411 | 331 | 179 | 2 | 45 | 371 | 97 | 426 | 3.22e-102 | 310 |
| MsG0580024455.01.T01 | MTR_8g098930 | 41.945 | 329 | 188 | 1 | 42 | 367 | 103 | 431 | 9.73e-102 | 309 |
| MsG0580024455.01.T01 | MTR_8g101820 | 41.768 | 328 | 177 | 3 | 41 | 367 | 95 | 409 | 1.90e-97 | 296 |
| MsG0580024455.01.T01 | MTR_8g028600 | 38.344 | 326 | 201 | 0 | 42 | 367 | 102 | 427 | 1.80e-90 | 280 |
| MsG0580024455.01.T01 | MTR_7g079080 | 38.298 | 329 | 202 | 1 | 40 | 367 | 100 | 428 | 1.75e-87 | 273 |
| MsG0580024455.01.T01 | MTR_7g079080 | 38.080 | 323 | 199 | 1 | 46 | 367 | 1 | 323 | 4.08e-87 | 268 |
| MsG0580024455.01.T01 | MTR_8g023140 | 21.727 | 359 | 256 | 12 | 33 | 367 | 154 | 511 | 9.10e-14 | 72.8 |
| MsG0580024455.01.T01 | MTR_5g033230 | 25.175 | 143 | 104 | 3 | 57 | 197 | 129 | 270 | 2.22e-11 | 65.5 |
| MsG0580024455.01.T01 | MTR_5g033230 | 25.175 | 143 | 104 | 3 | 57 | 197 | 129 | 270 | 2.64e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024455.01.T01 | AT1G62960 | 63.174 | 334 | 121 | 2 | 42 | 373 | 219 | 552 | 7.96e-157 | 452 |
| MsG0580024455.01.T01 | AT5G51690 | 56.193 | 331 | 145 | 0 | 43 | 373 | 39 | 369 | 1.42e-147 | 422 |
| MsG0580024455.01.T01 | AT5G51690 | 56.193 | 331 | 145 | 0 | 43 | 373 | 162 | 492 | 2.03e-145 | 421 |
| MsG0580024455.01.T01 | AT4G37770 | 45.723 | 339 | 180 | 1 | 41 | 375 | 94 | 432 | 2.59e-111 | 333 |
| MsG0580024455.01.T01 | AT4G26200 | 45.455 | 330 | 178 | 1 | 40 | 367 | 108 | 437 | 1.01e-106 | 321 |
| MsG0580024455.01.T01 | AT4G11280 | 41.141 | 333 | 194 | 2 | 40 | 371 | 104 | 435 | 5.69e-100 | 305 |
| MsG0580024455.01.T01 | AT4G08040 | 42.073 | 328 | 189 | 1 | 41 | 367 | 92 | 419 | 1.69e-99 | 303 |
| MsG0580024455.01.T01 | AT3G49700 | 43.658 | 339 | 187 | 1 | 40 | 374 | 93 | 431 | 2.63e-99 | 303 |
| MsG0580024455.01.T01 | AT2G22810 | 43.333 | 330 | 182 | 3 | 43 | 367 | 96 | 425 | 3.22e-99 | 303 |
| MsG0580024455.01.T01 | AT5G65800 | 42.773 | 339 | 190 | 2 | 40 | 374 | 93 | 431 | 1.08e-97 | 298 |
| MsG0580024455.01.T01 | AT1G01480 | 37.349 | 332 | 204 | 2 | 40 | 367 | 101 | 432 | 2.15e-90 | 281 |
| MsG0580024455.01.T01 | AT3G61510 | 40.426 | 329 | 192 | 2 | 40 | 367 | 100 | 425 | 2.95e-90 | 280 |
| MsG0580024455.01.T01 | AT1G01480 | 37.423 | 326 | 200 | 2 | 46 | 367 | 1 | 326 | 1.61e-89 | 275 |
| MsG0580024455.01.T01 | AT1G72330 | 20.659 | 334 | 240 | 10 | 57 | 367 | 196 | 527 | 1.58e-16 | 81.6 |
| MsG0580024455.01.T01 | AT1G72330 | 20.173 | 347 | 239 | 10 | 57 | 367 | 196 | 540 | 4.62e-15 | 77.0 |
| MsG0580024455.01.T01 | AT1G17290 | 20.120 | 333 | 243 | 10 | 57 | 367 | 199 | 530 | 8.12e-15 | 76.3 |
| MsG0580024455.01.T01 | AT1G23310 | 23.464 | 179 | 132 | 4 | 23 | 197 | 93 | 270 | 2.62e-12 | 68.2 |
| MsG0580024455.01.T01 | AT1G23310 | 23.464 | 179 | 132 | 4 | 23 | 197 | 93 | 270 | 3.07e-12 | 68.2 |
| MsG0580024455.01.T01 | AT1G72330 | 21.795 | 156 | 119 | 3 | 57 | 210 | 196 | 350 | 1.31e-11 | 66.2 |
| MsG0580024455.01.T01 | AT1G70580 | 22.905 | 179 | 133 | 4 | 23 | 197 | 93 | 270 | 5.37e-11 | 64.3 |
| MsG0580024455.01.T01 | AT1G70580 | 22.905 | 179 | 133 | 4 | 23 | 197 | 93 | 270 | 5.37e-11 | 64.3 |
| MsG0580024455.01.T01 | AT1G70580 | 22.905 | 179 | 133 | 4 | 23 | 197 | 93 | 270 | 5.37e-11 | 64.3 |
| MsG0580024455.01.T01 | AT1G70580 | 22.905 | 179 | 133 | 4 | 23 | 197 | 93 | 270 | 5.37e-11 | 64.3 |
| MsG0580024455.01.T01 | AT5G36160 | 24.731 | 186 | 126 | 4 | 40 | 225 | 91 | 262 | 5.39e-11 | 64.3 |
Find 92 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTGTCTTTATTCGTTAA+AGG | 0.163731 | 5:-5178509 | None:intergenic |
| ATAATCTCTAATGAAATATT+TGG | 0.209776 | 5:+5177668 | MsG0580024455.01.T01:CDS |
| ATTTGTAACATTGCAATAAA+AGG | 0.246407 | 5:-5178637 | None:intergenic |
| GCAAAAGCCACCACTGCTTC+TGG | 0.296696 | 5:-5178032 | None:intergenic |
| TGGTTTCATGTCTCAAGTTT+TGG | 0.325778 | 5:+5177189 | MsG0580024455.01.T01:CDS |
| AGAAACACTACTTGATCTTC+TGG | 0.360922 | 5:+5177619 | MsG0580024455.01.T01:CDS |
| AGTTCATATAGTGTTTGATT+TGG | 0.363982 | 5:+5177766 | MsG0580024455.01.T01:CDS |
| TGTGAAGGGTTGAAGAAAAC+TGG | 0.369060 | 5:-5177217 | None:intergenic |
| ATTATTTCTGCAAATTTCAT+TGG | 0.370391 | 5:+5178287 | MsG0580024455.01.T01:three_prime_UTR |
| AGCTTCTGCCTAGCAGATAA+TGG | 0.376523 | 5:+5177283 | MsG0580024455.01.T01:CDS |
| ATCCACAACATTCTCATTAT+AGG | 0.385218 | 5:-5177834 | None:intergenic |
| GTTCCCACGCCTCATAGTCC+TGG | 0.388688 | 5:+5177319 | MsG0580024455.01.T01:CDS |
| TCTTCGCTTGGTTGAAAGCT+TGG | 0.391216 | 5:-5177526 | None:intergenic |
| GCTTTGATGAGGCCGTAAAA+TGG | 0.391674 | 5:+5177429 | MsG0580024455.01.T01:intron |
| TTTCTTCAACCCTTCACATA+TGG | 0.391679 | 5:+5177222 | MsG0580024455.01.T01:CDS |
| GGGTGTCCTCTCTATCTATC+TGG | 0.406927 | 5:+5177063 | MsG0580024455.01.T01:CDS |
| TTTGACTACGTTTCTTCGCT+TGG | 0.407338 | 5:-5177538 | None:intergenic |
| GAGGCCGTAAAATGGCGATC+TGG | 0.407730 | 5:+5177437 | MsG0580024455.01.T01:CDS |
| GTAATAAGCAATTGCTGAGT+TGG | 0.421065 | 5:-5177896 | None:intergenic |
| GTGGAAGGATTAGAGCAGTT+GGG | 0.430008 | 5:+5177998 | MsG0580024455.01.T01:CDS |
| ATTCGTTCCTATAGTGAAAA+GGG | 0.430876 | 5:+5178079 | MsG0580024455.01.T01:CDS |
| TTCTCGAATCATACAGGTTG+TGG | 0.431323 | 5:+5177165 | MsG0580024455.01.T01:CDS |
| AATATACAAAACAAATAAAC+AGG | 0.435213 | 5:-5178362 | None:intergenic |
| CATTCGTTCCTATAGTGAAA+AGG | 0.435473 | 5:+5178078 | MsG0580024455.01.T01:CDS |
| CGATTTAATAATTTGCCAGC+AGG | 0.436573 | 5:-5177596 | None:intergenic |
| AGGCCGTAAAATGGCGATCT+GGG | 0.452160 | 5:+5177438 | MsG0580024455.01.T01:CDS |
| AAACCTTGTATCTGAAATCA+TGG | 0.453144 | 5:-5177918 | None:intergenic |
| TTGCTCAAGAGGACGGGTAT+TGG | 0.453241 | 5:+5178383 | MsG0580024455.01.T01:three_prime_UTR |
| TCTTAATTCTCGAATCATAC+AGG | 0.455411 | 5:+5177159 | MsG0580024455.01.T01:CDS |
| CCTGTAGTAATGGAACGAAT+CGG | 0.459030 | 5:+5178229 | MsG0580024455.01.T01:CDS |
| CTGTAGTAATGGAACGAATC+GGG | 0.469670 | 5:+5178230 | MsG0580024455.01.T01:CDS |
| ACGAATAAAGACAATATTGA+GGG | 0.469841 | 5:+5178515 | MsG0580024455.01.T01:three_prime_UTR |
| GCAGAAGCTTAGAATTTCAA+TGG | 0.475169 | 5:-5177269 | None:intergenic |
| CATCAGTTCATGAATGTACT+CGG | 0.479838 | 5:-5178449 | None:intergenic |
| CGAATCATACAGGTTGTGGC+TGG | 0.480143 | 5:+5177169 | MsG0580024455.01.T01:CDS |
| CCGATTCGTTCCATTACTAC+AGG | 0.480415 | 5:-5178229 | None:intergenic |
| TGTGAGCATGGCAGAAATCA+TGG | 0.480730 | 5:+5177718 | MsG0580024455.01.T01:CDS |
| AAGCTTAGAATTTCAATGGC+AGG | 0.484745 | 5:-5177265 | None:intergenic |
| TCACATATGGTGCTAACTGC+AGG | 0.490346 | 5:+5177235 | MsG0580024455.01.T01:CDS |
| ATCTCTAATGAAATATTTGG+AGG | 0.499661 | 5:+5177671 | MsG0580024455.01.T01:CDS |
| AAATGATATTCCTGTAGTAA+TGG | 0.500041 | 5:+5178219 | MsG0580024455.01.T01:CDS |
| TGTGGAAGGATTAGAGCAGT+TGG | 0.502576 | 5:+5177997 | MsG0580024455.01.T01:CDS |
| AACGAATAAAGACAATATTG+AGG | 0.504860 | 5:+5178514 | MsG0580024455.01.T01:three_prime_UTR |
| AATTTGCCAGCAGGGTTCGA+AGG | 0.512224 | 5:-5177587 | None:intergenic |
| TGTATATTGCTCAAGAGGAC+GGG | 0.512616 | 5:+5178377 | MsG0580024455.01.T01:three_prime_UTR |
| ATGTATAATGCATTTGTGGA+AGG | 0.513384 | 5:+5177983 | MsG0580024455.01.T01:CDS |
| GACTATGAGGCGTGGGAACA+AGG | 0.514495 | 5:-5177315 | None:intergenic |
| ATGCATTTCCATTATCTGCT+AGG | 0.514780 | 5:-5177291 | None:intergenic |
| AGCTTAGAATTTCAATGGCA+GGG | 0.517674 | 5:-5177264 | None:intergenic |
| AGCTAAGATCAATGTTACTC+CGG | 0.521490 | 5:+5178135 | MsG0580024455.01.T01:CDS |
| TTGTATATTGCTCAAGAGGA+CGG | 0.524294 | 5:+5178376 | MsG0580024455.01.T01:three_prime_UTR |
| TCAAACCCTTCGAACCCTGC+TGG | 0.524906 | 5:+5177581 | MsG0580024455.01.T01:CDS |
| TTACCATGATTTCAGATACA+AGG | 0.534016 | 5:+5177915 | MsG0580024455.01.T01:CDS |
| TTCCCACGCCTCATAGTCCT+GGG | 0.537875 | 5:+5177320 | MsG0580024455.01.T01:CDS |
| GCTAAGATCAATGTTACTCC+GGG | 0.552971 | 5:+5178136 | MsG0580024455.01.T01:CDS |
| GACAGTTACCCAGGACTATG+AGG | 0.555781 | 5:-5177328 | None:intergenic |
| GAGAATTAAGATAGAAACAA+AGG | 0.556228 | 5:-5177147 | None:intergenic |
| AGCAACTTCAAGTGAATGCA+AGG | 0.557749 | 5:-5177101 | None:intergenic |
| TGGAAGCGGAAGATCATGAT+CGG | 0.557918 | 5:+5177738 | MsG0580024455.01.T01:CDS |
| AAACGAAGAGTTTGTGAGCA+TGG | 0.560825 | 5:+5177706 | MsG0580024455.01.T01:CDS |
| ATAACTCCTACATTAAAACT+TGG | 0.562403 | 5:-5177806 | None:intergenic |
| CGTAAAATGGCGATCTGGGG+TGG | 0.563080 | 5:+5177442 | MsG0580024455.01.T01:CDS |
| GGAAGCGGAAGATCATGATC+GGG | 0.568398 | 5:+5177739 | MsG0580024455.01.T01:CDS |
| CTCCTATAATGAGAATGTTG+TGG | 0.573694 | 5:+5177832 | MsG0580024455.01.T01:CDS |
| CATGGCAGAAATCATGGAAG+CGG | 0.576068 | 5:+5177724 | MsG0580024455.01.T01:CDS |
| ATTTGCCAGCAGGGTTCGAA+GGG | 0.580365 | 5:-5177586 | None:intergenic |
| ATCAGTTCATGAATGTACTC+GGG | 0.582279 | 5:-5178448 | None:intergenic |
| ACACTTGAAAGTTGAAACAA+TGG | 0.583650 | 5:+5178602 | MsG0580024455.01.T01:three_prime_UTR |
| GCAGTTAGCACCATATGTGA+AGG | 0.584986 | 5:-5177232 | None:intergenic |
| TTCGTTCCTATAGTGAAAAG+GGG | 0.594801 | 5:+5178080 | MsG0580024455.01.T01:CDS |
| GATTTAATAATTTGCCAGCA+GGG | 0.595062 | 5:-5177595 | None:intergenic |
| CGTTAAAGGTTACAAAGGAG+AGG | 0.597571 | 5:-5178495 | None:intergenic |
| GTCACTGTATTGAACCAGGA+TGG | 0.598491 | 5:+5178167 | MsG0580024455.01.T01:CDS |
| GAGTGCACCAGAAGCAGTGG+TGG | 0.601656 | 5:+5178025 | MsG0580024455.01.T01:CDS |
| TCATAAAGACTAACAAGTTG+AGG | 0.605108 | 5:+5177951 | MsG0580024455.01.T01:CDS |
| ATTGAGTGCACCAGAAGCAG+TGG | 0.606848 | 5:+5178022 | MsG0580024455.01.T01:CDS |
| AACTTGATTGACTTTCAACA+TGG | 0.607665 | 5:-5178406 | None:intergenic |
| CATATGCCAGATAGATAGAG+AGG | 0.609286 | 5:-5177069 | None:intergenic |
| TGATGAATCTGACATCACTC+AGG | 0.611942 | 5:+5178331 | MsG0580024455.01.T01:three_prime_UTR |
| ATACAGTGACAAGAGGATCC+CGG | 0.612424 | 5:-5178154 | None:intergenic |
| TACCCAGGACTATGAGGCGT+GGG | 0.614255 | 5:-5177322 | None:intergenic |
| GAAGAAAGAAACAAGCAAAG+AGG | 0.615118 | 5:+5178537 | MsG0580024455.01.T01:three_prime_UTR |
| TCTTGTCACTGTATTGAACC+AGG | 0.618687 | 5:+5178163 | MsG0580024455.01.T01:CDS |
| GCAAAGAGGATTCAAATCGT+AGG | 0.620636 | 5:+5178551 | MsG0580024455.01.T01:three_prime_UTR |
| TTATTCGTTAAAGGTTACAA+AGG | 0.621756 | 5:-5178500 | None:intergenic |
| CAGTTAGCACCATATGTGAA+GGG | 0.623911 | 5:-5177231 | None:intergenic |
| CCTATGGTGCAGCTTTGATG+AGG | 0.645473 | 5:+5177418 | MsG0580024455.01.T01:intron |
| TTCGAGACTACAAGTTGACG+TGG | 0.646238 | 5:+5178259 | MsG0580024455.01.T01:exon |
| TGGTTCAATACAGTGACAAG+AGG | 0.646697 | 5:-5178161 | None:intergenic |
| GGCCGTAAAATGGCGATCTG+GGG | 0.651142 | 5:+5177439 | MsG0580024455.01.T01:CDS |
| TTACCCAGGACTATGAGGCG+TGG | 0.667929 | 5:-5177323 | None:intergenic |
| TCGTTCCTATAGTGAAAAGG+GGG | 0.686058 | 5:+5178081 | MsG0580024455.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATACAAAACAAATAAAC+AGG | - | Chr5:5178365-5178384 | None:intergenic | 15.0% |
| !! | ATAATCTCTAATGAAATATT+TGG | + | Chr5:5177668-5177687 | MsG0580024455.01.T01:CDS | 15.0% |
| !! | AAAAATGTATAATGCATTTG+TGG | + | Chr5:5177979-5177998 | MsG0580024455.01.T01:CDS | 20.0% |
| !! | ATATTGTCTTTATTCGTTAA+AGG | - | Chr5:5178512-5178531 | None:intergenic | 20.0% |
| !! | TCAATGTAGTAAAACAAAAA+CGG | - | Chr5:5178195-5178214 | None:intergenic | 20.0% |
| !!! | ATTATTTCTGCAAATTTCAT+TGG | + | Chr5:5178287-5178306 | MsG0580024455.01.T01:three_prime_UTR | 20.0% |
| !!! | TAATGATAGTTTTAAACCTA+TGG | + | Chr5:5177402-5177421 | MsG0580024455.01.T01:intron | 20.0% |
| ! | AAATGATATTCCTGTAGTAA+TGG | + | Chr5:5178219-5178238 | MsG0580024455.01.T01:CDS | 25.0% |
| ! | AACGAATAAAGACAATATTG+AGG | + | Chr5:5178514-5178533 | MsG0580024455.01.T01:three_prime_UTR | 25.0% |
| ! | ACGAATAAAGACAATATTGA+GGG | + | Chr5:5178515-5178534 | MsG0580024455.01.T01:three_prime_UTR | 25.0% |
| ! | AGTTCATATAGTGTTTGATT+TGG | + | Chr5:5177766-5177785 | MsG0580024455.01.T01:CDS | 25.0% |
| ! | ATAACTCCTACATTAAAACT+TGG | - | Chr5:5177809-5177828 | None:intergenic | 25.0% |
| ! | ATCTCTAATGAAATATTTGG+AGG | + | Chr5:5177671-5177690 | MsG0580024455.01.T01:CDS | 25.0% |
| ! | GAGAATTAAGATAGAAACAA+AGG | - | Chr5:5177150-5177169 | None:intergenic | 25.0% |
| ! | TTATTCGTTAAAGGTTACAA+AGG | - | Chr5:5178503-5178522 | None:intergenic | 25.0% |
| !! | AGATAACTAAACAAGGATTT+TGG | - | Chr5:5177366-5177385 | None:intergenic | 25.0% |
| !!! | TATGTTCCAAGTTTTAATGT+AGG | + | Chr5:5177800-5177819 | MsG0580024455.01.T01:CDS | 25.0% |
| ACACTTGAAAGTTGAAACAA+TGG | + | Chr5:5178602-5178621 | MsG0580024455.01.T01:three_prime_UTR | 30.0% | |
| ATCCACAACATTCTCATTAT+AGG | - | Chr5:5177837-5177856 | None:intergenic | 30.0% | |
| ATGTATAATGCATTTGTGGA+AGG | + | Chr5:5177983-5178002 | MsG0580024455.01.T01:CDS | 30.0% | |
| ATTCGTTCCTATAGTGAAAA+GGG | + | Chr5:5178079-5178098 | MsG0580024455.01.T01:CDS | 30.0% | |
| GAAGAGTAGATAACTAAACA+AGG | - | Chr5:5177373-5177392 | None:intergenic | 30.0% | |
| TCATAAAGACTAACAAGTTG+AGG | + | Chr5:5177951-5177970 | MsG0580024455.01.T01:CDS | 30.0% | |
| TCTTAATTCTCGAATCATAC+AGG | + | Chr5:5177159-5177178 | MsG0580024455.01.T01:CDS | 30.0% | |
| TTACCATGATTTCAGATACA+AGG | + | Chr5:5177915-5177934 | MsG0580024455.01.T01:CDS | 30.0% | |
| ! | AAACCTTGTATCTGAAATCA+TGG | - | Chr5:5177921-5177940 | None:intergenic | 30.0% |
| ! | AACTTGATTGACTTTCAACA+TGG | - | Chr5:5178409-5178428 | None:intergenic | 30.0% |
| ! | GATTTAATAATTTGCCAGCA+GGG | - | Chr5:5177598-5177617 | None:intergenic | 30.0% |
| ! | TGTTTTGTATATTGCTCAAG+AGG | + | Chr5:5178372-5178391 | MsG0580024455.01.T01:three_prime_UTR | 30.0% |
| !! | TCAACTTTCAAGTGTTTTCA+GGG | - | Chr5:5178597-5178616 | None:intergenic | 30.0% |
| !! | TTCAACTTTCAAGTGTTTTC+AGG | - | Chr5:5178598-5178617 | None:intergenic | 30.0% |
| !!! | TGAGAATTGTGCCATTTTTT+TGG | - | Chr5:5177864-5177883 | None:intergenic | 30.0% |
| AAACGTAGTCAAAAAGTTCG+TGG | + | Chr5:5177548-5177567 | MsG0580024455.01.T01:CDS | 35.0% | |
| AAGCTTAGAATTTCAATGGC+AGG | - | Chr5:5177268-5177287 | None:intergenic | 35.0% | |
| AGAAACACTACTTGATCTTC+TGG | + | Chr5:5177619-5177638 | MsG0580024455.01.T01:CDS | 35.0% | |
| AGCTAAGATCAATGTTACTC+CGG | + | Chr5:5178135-5178154 | MsG0580024455.01.T01:CDS | 35.0% | |
| AGCTTAGAATTTCAATGGCA+GGG | - | Chr5:5177267-5177286 | None:intergenic | 35.0% | |
| ATCAGTTCATGAATGTACTC+GGG | - | Chr5:5178451-5178470 | None:intergenic | 35.0% | |
| ATGCATTTCCATTATCTGCT+AGG | - | Chr5:5177294-5177313 | None:intergenic | 35.0% | |
| CATCAGTTCATGAATGTACT+CGG | - | Chr5:5178452-5178471 | None:intergenic | 35.0% | |
| CATTCGTTCCTATAGTGAAA+AGG | + | Chr5:5178078-5178097 | MsG0580024455.01.T01:CDS | 35.0% | |
| CTCCTATAATGAGAATGTTG+TGG | + | Chr5:5177832-5177851 | MsG0580024455.01.T01:CDS | 35.0% | |
| GAAGAAAGAAACAAGCAAAG+AGG | + | Chr5:5178537-5178556 | MsG0580024455.01.T01:three_prime_UTR | 35.0% | |
| GCAGAAGCTTAGAATTTCAA+TGG | - | Chr5:5177272-5177291 | None:intergenic | 35.0% | |
| GTAATAAGCAATTGCTGAGT+TGG | - | Chr5:5177899-5177918 | None:intergenic | 35.0% | |
| TATGAAATTGACAGTTACCC+AGG | - | Chr5:5177340-5177359 | None:intergenic | 35.0% | |
| TTAGTTATCTACTCTTCTGC+AGG | + | Chr5:5177376-5177395 | MsG0580024455.01.T01:intron | 35.0% | |
| TTCGTTCCTATAGTGAAAAG+GGG | + | Chr5:5178080-5178099 | MsG0580024455.01.T01:CDS | 35.0% | |
| TTGTATATTGCTCAAGAGGA+CGG | + | Chr5:5178376-5178395 | MsG0580024455.01.T01:three_prime_UTR | 35.0% | |
| TTTCTTCAACCCTTCACATA+TGG | + | Chr5:5177222-5177241 | MsG0580024455.01.T01:CDS | 35.0% | |
| ! | CGATTTAATAATTTGCCAGC+AGG | - | Chr5:5177599-5177618 | None:intergenic | 35.0% |
| ! | TGGTTTCATGTCTCAAGTTT+TGG | + | Chr5:5177189-5177208 | MsG0580024455.01.T01:CDS | 35.0% |
| !! | CAACTTTCAAGTGTTTTCAG+GGG | - | Chr5:5178596-5178615 | None:intergenic | 35.0% |
| !!! | GAATTGTGCCATTTTTTTGG+AGG | - | Chr5:5177861-5177880 | None:intergenic | 35.0% |
| AAACAAAAACGGAACCATCC+TGG | - | Chr5:5178184-5178203 | None:intergenic | 40.0% | |
| AAACGAAGAGTTTGTGAGCA+TGG | + | Chr5:5177706-5177725 | MsG0580024455.01.T01:CDS | 40.0% | |
| AGCAACTTCAAGTGAATGCA+AGG | - | Chr5:5177104-5177123 | None:intergenic | 40.0% | |
| CAGTTAGCACCATATGTGAA+GGG | - | Chr5:5177234-5177253 | None:intergenic | 40.0% | |
| CATATGCCAGATAGATAGAG+AGG | - | Chr5:5177072-5177091 | None:intergenic | 40.0% | |
| CGTTAAAGGTTACAAAGGAG+AGG | - | Chr5:5178498-5178517 | None:intergenic | 40.0% | |
| GCAAAGAGGATTCAAATCGT+AGG | + | Chr5:5178551-5178570 | MsG0580024455.01.T01:three_prime_UTR | 40.0% | |
| GCTAAGATCAATGTTACTCC+GGG | + | Chr5:5178136-5178155 | MsG0580024455.01.T01:CDS | 40.0% | |
| TCGTTCCTATAGTGAAAAGG+GGG | + | Chr5:5178081-5178100 | MsG0580024455.01.T01:CDS | 40.0% | |
| TCTTGTCACTGTATTGAACC+AGG | + | Chr5:5178163-5178182 | MsG0580024455.01.T01:CDS | 40.0% | |
| TGATGAATCTGACATCACTC+AGG | + | Chr5:5178331-5178350 | MsG0580024455.01.T01:three_prime_UTR | 40.0% | |
| TGGTTCAATACAGTGACAAG+AGG | - | Chr5:5178164-5178183 | None:intergenic | 40.0% | |
| TGTATATTGCTCAAGAGGAC+GGG | + | Chr5:5178377-5178396 | MsG0580024455.01.T01:three_prime_UTR | 40.0% | |
| TGTGAAGGGTTGAAGAAAAC+TGG | - | Chr5:5177220-5177239 | None:intergenic | 40.0% | |
| TGTGGATGCCTCCAAAAAAA+TGG | + | Chr5:5177850-5177869 | MsG0580024455.01.T01:CDS | 40.0% | |
| TTCTCGAATCATACAGGTTG+TGG | + | Chr5:5177165-5177184 | MsG0580024455.01.T01:CDS | 40.0% | |
| TTTGACTACGTTTCTTCGCT+TGG | - | Chr5:5177541-5177560 | None:intergenic | 40.0% | |
| ! | CCTGTAGTAATGGAACGAAT+CGG | + | Chr5:5178229-5178248 | MsG0580024455.01.T01:CDS | 40.0% |
| ! | CTGTAGTAATGGAACGAATC+GGG | + | Chr5:5178230-5178249 | MsG0580024455.01.T01:CDS | 40.0% |
| AGCTTCTGCCTAGCAGATAA+TGG | + | Chr5:5177283-5177302 | MsG0580024455.01.T01:CDS | 45.0% | |
| ATACAGTGACAAGAGGATCC+CGG | - | Chr5:5178157-5178176 | None:intergenic | 45.0% | |
| CATGGCAGAAATCATGGAAG+CGG | + | Chr5:5177724-5177743 | MsG0580024455.01.T01:CDS | 45.0% | |
| CTATAGTGAAAAGGGGGAAC+TGG | + | Chr5:5178087-5178106 | MsG0580024455.01.T01:CDS | 45.0% | |
| GCAGTTAGCACCATATGTGA+AGG | - | Chr5:5177235-5177254 | None:intergenic | 45.0% | |
| GCTTTGATGAGGCCGTAAAA+TGG | + | Chr5:5177429-5177448 | MsG0580024455.01.T01:intron | 45.0% | |
| GTCACTGTATTGAACCAGGA+TGG | + | Chr5:5178167-5178186 | MsG0580024455.01.T01:CDS | 45.0% | |
| GTGGAAGGATTAGAGCAGTT+GGG | + | Chr5:5177998-5178017 | MsG0580024455.01.T01:CDS | 45.0% | |
| TCTTCGCTTGGTTGAAAGCT+TGG | - | Chr5:5177529-5177548 | None:intergenic | 45.0% | |
| TGGAAGCGGAAGATCATGAT+CGG | + | Chr5:5177738-5177757 | MsG0580024455.01.T01:CDS | 45.0% | |
| TGTGAGCATGGCAGAAATCA+TGG | + | Chr5:5177718-5177737 | MsG0580024455.01.T01:CDS | 45.0% | |
| TGTGGAAGGATTAGAGCAGT+TGG | + | Chr5:5177997-5178016 | MsG0580024455.01.T01:CDS | 45.0% | |
| ! | CAGTTCCCCCTTTTCACTAT+AGG | - | Chr5:5178089-5178108 | None:intergenic | 45.0% |
| ! | CCGATTCGTTCCATTACTAC+AGG | - | Chr5:5178232-5178251 | None:intergenic | 45.0% |
| ! | TCACATATGGTGCTAACTGC+AGG | + | Chr5:5177235-5177254 | MsG0580024455.01.T01:CDS | 45.0% |
| ! | TTCGAGACTACAAGTTGACG+TGG | + | Chr5:5178259-5178278 | MsG0580024455.01.T01:exon | 45.0% |
| AATTTGCCAGCAGGGTTCGA+AGG | - | Chr5:5177590-5177609 | None:intergenic | 50.0% | |
| AGGCCGTAAAATGGCGATCT+GGG | + | Chr5:5177438-5177457 | MsG0580024455.01.T01:CDS | 50.0% | |
| ATTGAGTGCACCAGAAGCAG+TGG | + | Chr5:5178022-5178041 | MsG0580024455.01.T01:CDS | 50.0% | |
| ATTTGCCAGCAGGGTTCGAA+GGG | - | Chr5:5177589-5177608 | None:intergenic | 50.0% | |
| CCTCATCAAAGCTGCACCAT+AGG | - | Chr5:5177421-5177440 | None:intergenic | 50.0% | |
| CGAATCATACAGGTTGTGGC+TGG | + | Chr5:5177169-5177188 | MsG0580024455.01.T01:CDS | 50.0% | |
| GACAGTTACCCAGGACTATG+AGG | - | Chr5:5177331-5177350 | None:intergenic | 50.0% | |
| GGAAGCGGAAGATCATGATC+GGG | + | Chr5:5177739-5177758 | MsG0580024455.01.T01:CDS | 50.0% | |
| GGGTGTCCTCTCTATCTATC+TGG | + | Chr5:5177063-5177082 | MsG0580024455.01.T01:CDS | 50.0% | |
| TTGCTCAAGAGGACGGGTAT+TGG | + | Chr5:5178383-5178402 | MsG0580024455.01.T01:three_prime_UTR | 50.0% | |
| ! | CCTATGGTGCAGCTTTGATG+AGG | + | Chr5:5177418-5177437 | MsG0580024455.01.T01:intron | 50.0% |
| !! | CACCCCAGATCGCCATTTTA+CGG | - | Chr5:5177444-5177463 | None:intergenic | 50.0% |
| AAAAGGGGGAACTGGAGCTC+TGG | + | Chr5:5178095-5178114 | MsG0580024455.01.T01:CDS | 55.0% | |
| AAAGGGGGAACTGGAGCTCT+GGG | + | Chr5:5178096-5178115 | MsG0580024455.01.T01:CDS | 55.0% | |
| CGTAAAATGGCGATCTGGGG+TGG | + | Chr5:5177442-5177461 | MsG0580024455.01.T01:CDS | 55.0% | |
| GACTATGAGGCGTGGGAACA+AGG | - | Chr5:5177318-5177337 | None:intergenic | 55.0% | |
| GAGGCCGTAAAATGGCGATC+TGG | + | Chr5:5177437-5177456 | MsG0580024455.01.T01:CDS | 55.0% | |
| GCAAAAGCCACCACTGCTTC+TGG | - | Chr5:5178035-5178054 | None:intergenic | 55.0% | |
| GGCCGTAAAATGGCGATCTG+GGG | + | Chr5:5177439-5177458 | MsG0580024455.01.T01:CDS | 55.0% | |
| TACCCAGGACTATGAGGCGT+GGG | - | Chr5:5177325-5177344 | None:intergenic | 55.0% | |
| TCAAACCCTTCGAACCCTGC+TGG | + | Chr5:5177581-5177600 | MsG0580024455.01.T01:CDS | 55.0% | |
| TTACCCAGGACTATGAGGCG+TGG | - | Chr5:5177326-5177345 | None:intergenic | 55.0% | |
| TTCCCACGCCTCATAGTCCT+GGG | + | Chr5:5177320-5177339 | MsG0580024455.01.T01:CDS | 55.0% | |
| ! | CAGTGGTGGCTTTTGCTGCT+GGG | + | Chr5:5178039-5178058 | MsG0580024455.01.T01:CDS | 55.0% |
| GAGTGCACCAGAAGCAGTGG+TGG | + | Chr5:5178025-5178044 | MsG0580024455.01.T01:CDS | 60.0% | |
| GTTCCCACGCCTCATAGTCC+TGG | + | Chr5:5177319-5177338 | MsG0580024455.01.T01:CDS | 60.0% | |
| ! | GCAGTGGTGGCTTTTGCTGC+TGG | + | Chr5:5178038-5178057 | MsG0580024455.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 5177061 | 5178645 | 5177061 | ID=MsG0580024455.01;Name=MsG0580024455.01 |
| Chr5 | mRNA | 5177061 | 5178645 | 5177061 | ID=MsG0580024455.01.T01;Parent=MsG0580024455.01;Name=MsG0580024455.01.T01;_AED=0.39;_eAED=0.44;_QI=0|1|0.5|1|1|1|2|369|375 |
| Chr5 | exon | 5177061 | 5177341 | 5177061 | ID=MsG0580024455.01.T01:exon:680;Parent=MsG0580024455.01.T01 |
| Chr5 | exon | 5177430 | 5178645 | 5177430 | ID=MsG0580024455.01.T01:exon:681;Parent=MsG0580024455.01.T01 |
| Chr5 | CDS | 5177061 | 5177341 | 5177061 | ID=MsG0580024455.01.T01:cds;Parent=MsG0580024455.01.T01 |
| Chr5 | CDS | 5177430 | 5178276 | 5177430 | ID=MsG0580024455.01.T01:cds;Parent=MsG0580024455.01.T01 |
| Chr5 | three_prime_UTR | 5178277 | 5178645 | 5178277 | ID=MsG0580024455.01.T01:three_prime_utr;Parent=MsG0580024455.01.T01 |
| Gene Sequence |
| Protein sequence |
