Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008040 | sp|Q6NMC6|ABIL3_ARATH | 62.691 | 327 | 112 | 5 | 14 | 336 | 1 | 321 | 4.31e-138 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008040 | A0A072VD45 | 98.204 | 334 | 6 | 0 | 3 | 336 | 9 | 342 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0008040 | 0.818437 | 1.960885e-52 | -8.615850e-47 |
| Msa0008040 | Msa0025160 | 0.835557 | 1.565698e-56 | -8.615850e-47 |
| Msa0008040 | Msa0025580 | 0.812061 | 5.124812e-51 | -8.615850e-47 |
| Msa0008040 | Msa0027280 | 0.826756 | 2.278425e-54 | -8.615850e-47 |
| Msa0008040 | Msa0034210 | 0.816176 | 6.329117e-52 | -8.615850e-47 |
| Msa0008040 | Msa0035140 | 0.800931 | 1.143352e-48 | -8.615850e-47 |
| Msa0008040 | Msa0035340 | 0.802437 | 5.612673e-49 | -8.615850e-47 |
| Msa0008040 | Msa0050660 | 0.857964 | 1.140007e-62 | -8.615850e-47 |
| Msa0008040 | Msa0050700 | 0.858235 | 9.465681e-63 | -8.615850e-47 |
| Msa0008040 | Msa0050790 | 0.853909 | 1.748852e-61 | -8.615850e-47 |
| Msa0008040 | Msa0054690 | 0.822093 | 2.848634e-53 | -8.615850e-47 |
| Msa0008040 | Msa0057540 | 0.871815 | 5.126403e-67 | -8.615850e-47 |
| Msa0008040 | Msa0072520 | 0.800480 | 1.412926e-48 | -8.615850e-47 |
| Msa0008040 | Msa0090400 | 0.800362 | 1.493823e-48 | -8.615850e-47 |
| Msa0008040 | Msa0121330 | 0.818160 | 2.265488e-52 | -8.615850e-47 |
| Msa0008040 | Msa0128310 | 0.812401 | 4.318929e-51 | -8.615850e-47 |
| Msa0008040 | Msa0140280 | 0.809927 | 1.485535e-50 | -8.615850e-47 |
| Msa0008040 | Msa0146650 | 0.829171 | 5.977003e-55 | -8.615850e-47 |
| Msa0008040 | Msa0149350 | 0.971908 | 6.553861e-134 | -8.615850e-47 |
| Msa0008040 | Msa0161930 | 0.802734 | 4.874161e-49 | -8.615850e-47 |
| Msa0008040 | Msa0174440 | 0.812208 | 4.758484e-51 | -8.615850e-47 |
| Msa0008040 | Msa0188610 | 0.811472 | 6.883777e-51 | -8.615850e-47 |
| Msa0008040 | Msa0270340 | 0.813748 | 2.188035e-51 | -8.615850e-47 |
| Msa0008040 | Msa0298470 | 0.804970 | 1.673012e-49 | -8.615850e-47 |
| Msa0008040 | Msa0380670 | 0.810617 | 1.054235e-50 | -8.615850e-47 |
| Msa0008040 | Msa0400000 | 0.801068 | 1.072158e-48 | -8.615850e-47 |
| Msa0008040 | Msa0422050 | 0.815893 | 7.320936e-52 | -8.615850e-47 |
| Msa0008040 | Msa0430300 | 0.801362 | 9.332445e-49 | -8.615850e-47 |
| Msa0008040 | Msa0431200 | 0.813513 | 2.463752e-51 | -8.615850e-47 |
| Msa0008040 | Msa0435210 | 0.835751 | 1.398587e-56 | -8.615850e-47 |
| Msa0008040 | Msa0472950 | 0.823971 | 1.039322e-53 | -8.615850e-47 |
| Msa0008040 | Msa0479320 | 0.805753 | 1.146341e-49 | -8.615850e-47 |
| Msa0008040 | Msa0517250 | 0.806899 | 6.575308e-50 | -8.615850e-47 |
| Msa0008040 | Msa0520260 | 0.817559 | 3.097202e-52 | -8.615850e-47 |
| Msa0008040 | Msa0528570 | 0.834285 | 3.274200e-56 | -8.615850e-47 |
| Msa0008040 | Msa0530780 | 0.816119 | 6.516882e-52 | -8.615850e-47 |
| Msa0008040 | Msa0541300 | 0.837965 | 3.807461e-57 | -8.615850e-47 |
| Msa0008040 | Msa0541310 | 0.840847 | 6.793314e-58 | -8.615850e-47 |
| Msa0008040 | Msa0548470 | 0.821338 | 4.257706e-53 | -8.615850e-47 |
| Msa0008040 | Msa0557460 | 0.824648 | 7.203184e-54 | -8.615850e-47 |
| Msa0008040 | Msa0562350 | 0.805108 | 1.564968e-49 | -8.615850e-47 |
| Msa0008040 | Msa0584420 | 0.801700 | 7.956842e-49 | -8.615850e-47 |
| Msa0008040 | Msa0585020 | 0.834501 | 2.889731e-56 | -8.615850e-47 |
| Msa0008040 | Msa0587620 | 0.801552 | 8.530590e-49 | -8.615850e-47 |
| Msa0008040 | Msa0597270 | 0.819832 | 9.440040e-53 | -8.615850e-47 |
| Msa0008040 | Msa0616210 | 0.810543 | 1.093950e-50 | -8.615850e-47 |
| Msa0008040 | Msa0644410 | 0.829709 | 4.424008e-55 | -8.615850e-47 |
| Msa0008040 | Msa0655700 | 0.834347 | 3.158290e-56 | -8.615850e-47 |
| Msa0008040 | Msa0661150 | 0.840610 | 7.838338e-58 | -8.615850e-47 |
| Msa0008040 | Msa0665620 | 0.803761 | 2.987060e-49 | -8.615850e-47 |
| Msa0008040 | Msa0666700 | 0.800185 | 1.622919e-48 | -8.615850e-47 |
| Msa0008040 | Msa0675330 | 0.833363 | 5.568918e-56 | -8.615850e-47 |
| Msa0008040 | Msa0699540 | 0.810589 | 1.069367e-50 | -8.615850e-47 |
| Msa0008040 | Msa0738700 | 0.810591 | 1.068247e-50 | -8.615850e-47 |
| Msa0008040 | Msa0756490 | 0.826083 | 3.295404e-54 | -8.615850e-47 |
| Msa0008040 | Msa0761670 | 0.806603 | 7.592812e-50 | -8.615850e-47 |
| Msa0008040 | Msa0819170 | 0.808612 | 2.843521e-50 | -8.615850e-47 |
| Msa0008040 | Msa0859290 | 0.826865 | 2.145029e-54 | -8.615850e-47 |
| Msa0008040 | Msa1009950 | 0.819445 | 1.157415e-52 | -8.615850e-47 |
| Msa0008040 | Msa1042160 | 0.855386 | 6.532490e-62 | -8.615850e-47 |
| Msa0008040 | Msa1042190 | 0.855044 | 8.212026e-62 | -8.615850e-47 |
| Msa0008040 | Msa1081690 | 0.825213 | 5.299022e-54 | -8.615850e-47 |
| Msa0008040 | Msa1090140 | 0.803054 | 4.186927e-49 | -8.615850e-47 |
| Msa0008040 | Msa1116220 | 0.805022 | 1.631438e-49 | -8.615850e-47 |
| Msa0008040 | Msa1116660 | 0.827264 | 1.722197e-54 | -8.615850e-47 |
| Msa0008040 | Msa1148960 | 0.800636 | 1.313035e-48 | -8.615850e-47 |
| Msa0008040 | Msa1166190 | 0.804808 | 1.808069e-49 | -8.615850e-47 |
| Msa0008040 | Msa1167470 | 0.844201 | 8.755350e-59 | -8.615850e-47 |
| Msa0008040 | Msa1282260 | 0.825758 | 3.937364e-54 | -8.615850e-47 |
| Msa0008040 | Msa1321340 | 0.813819 | 2.110433e-51 | -8.615850e-47 |
| Msa0008040 | Msa1343180 | 0.806098 | 9.700484e-50 | -8.615850e-47 |
| Msa0008040 | Msa1359690 | 0.800952 | 1.132061e-48 | -8.615850e-47 |
| Msa0008040 | Msa1364410 | 0.804722 | 1.884357e-49 | -8.615850e-47 |
| Msa0008040 | Msa1383310 | 0.805560 | 1.258474e-49 | -8.615850e-47 |
| Msa0008040 | Msa1384460 | 0.833250 | 5.941237e-56 | -8.615850e-47 |
| Msa0008040 | Msa1409410 | 0.833817 | 4.287613e-56 | -8.615850e-47 |
| Msa0008040 | Msa1415540 | 0.829873 | 4.035249e-55 | -8.615850e-47 |
| Msa0008040 | Msa1437930 | 0.800743 | 1.248645e-48 | -8.615850e-47 |
| Msa0008040 | Msa1440630 | 0.856667 | 2.754494e-62 | -8.615850e-47 |
| Msa0008040 | Msa1452140 | 0.814024 | 1.902080e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008040 | MtrunA17_Chr1g0146911 | 98.762 | 323 | 4 | 0 | 14 | 336 | 1 | 323 | 0.0 | 660 |
| Msa0008040 | MtrunA17_Chr3g0127011 | 74.924 | 327 | 77 | 3 | 14 | 336 | 1 | 326 | 1.64e-177 | 494 |
| Msa0008040 | MtrunA17_Chr8g0348041 | 52.672 | 131 | 62 | 0 | 26 | 156 | 15 | 145 | 1.40e-41 | 147 |
| Msa0008040 | MtrunA17_Chr7g0275191 | 50.000 | 134 | 65 | 1 | 31 | 162 | 2 | 135 | 3.82e-38 | 137 |
| Msa0008040 | MtrunA17_Chr6g0485851 | 28.926 | 121 | 85 | 1 | 34 | 154 | 19 | 138 | 1.07e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008040 | AT5G24310.1 | 62.691 | 327 | 112 | 5 | 14 | 336 | 1 | 321 | 4.38e-139 | 397 |
| Msa0008040 | AT3G49290.1 | 63.323 | 319 | 106 | 6 | 21 | 336 | 2 | 312 | 1.66e-137 | 393 |
| Msa0008040 | AT3G49290.2 | 63.323 | 319 | 106 | 6 | 21 | 336 | 2 | 312 | 1.66e-137 | 393 |
| Msa0008040 | AT5G24310.4 | 63.125 | 320 | 108 | 5 | 21 | 336 | 2 | 315 | 6.90e-137 | 391 |
| Msa0008040 | AT5G24310.3 | 60.245 | 327 | 106 | 6 | 14 | 336 | 1 | 307 | 7.96e-128 | 368 |
| Msa0008040 | AT5G24310.2 | 67.143 | 210 | 68 | 1 | 21 | 229 | 2 | 211 | 3.00e-97 | 288 |
| Msa0008040 | AT5G42030.1 | 38.079 | 302 | 147 | 5 | 26 | 324 | 14 | 278 | 1.07e-58 | 191 |
| Msa0008040 | AT5G42030.2 | 44.017 | 234 | 107 | 3 | 26 | 256 | 14 | 226 | 8.34e-55 | 182 |
| Msa0008040 | AT5G42030.3 | 46.023 | 176 | 83 | 1 | 26 | 201 | 14 | 177 | 1.42e-45 | 154 |
| Msa0008040 | AT2G46225.3 | 49.618 | 131 | 66 | 0 | 26 | 156 | 12 | 142 | 1.96e-38 | 138 |
| Msa0008040 | AT2G46225.1 | 49.618 | 131 | 66 | 0 | 26 | 156 | 12 | 142 | 2.05e-38 | 139 |
| Msa0008040 | AT2G46225.2 | 49.618 | 131 | 66 | 0 | 26 | 156 | 12 | 142 | 2.70e-38 | 139 |
| Msa0008040 | AT5G42030.4 | 33.465 | 254 | 129 | 5 | 74 | 324 | 15 | 231 | 5.98e-35 | 127 |
Find 78 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAAACTTCATCATAAT+TGG | 0.201171 | 1_1:+11599921 | None:intergenic |
| ATAAATACTGTGGATCATTT+AGG | 0.221162 | 1_1:-11599570 | Msa0008040:CDS |
| TAACAAGTCACTCACTTTAT+AGG | 0.234312 | 1_1:+11599539 | None:intergenic |
| ATATAACGTTTGTGATGTTT+TGG | 0.268290 | 1_1:+11599077 | None:intergenic |
| CTTATGGTTGCAATATATAA+AGG | 0.284749 | 1_1:+11600539 | None:intergenic |
| CAACATGGCCATAAAAGATT+TGG | 0.288186 | 1_1:-11598514 | Msa0008040:CDS |
| ACAATAGTAGTTGAAGAAAA+TGG | 0.289751 | 1_1:+11597781 | None:intergenic |
| ATCTTCCCCATGAATGAAAA+AGG | 0.307980 | 1_1:+11599973 | None:intergenic |
| ACTCTTTCCTTGCATTCTAT+TGG | 0.329751 | 1_1:+11597931 | None:intergenic |
| GTGGATCTGTTGCTTGAGTT+TGG | 0.358344 | 1_1:+11598295 | None:intergenic |
| GTAGTTGATCTACCAGTCTT+TGG | 0.366290 | 1_1:+11598319 | None:intergenic |
| ACCCTTACTCTTGCATTTGA+AGG | 0.367421 | 1_1:+11598265 | None:intergenic |
| AAGATGATTGGCATCACTTC+AGG | 0.368367 | 1_1:-11598846 | Msa0008040:CDS |
| CGACACTTCAAAGGTGTGTT+TGG | 0.368611 | 1_1:-11597853 | Msa0008040:three_prime_UTR |
| TCCTTTCTTGCAGTATCCTT+CGG | 0.371593 | 1_1:-11598134 | Msa0008040:intron |
| GCTCTTTGATGATAGTCTAA+TGG | 0.375978 | 1_1:-11599887 | Msa0008040:intron |
| AGAAGACGTTTACTCTTACT+AGG | 0.379538 | 1_1:+11598043 | None:intergenic |
| GTCCTTCAAATGCAAGAGTA+AGG | 0.381834 | 1_1:-11598267 | Msa0008040:CDS |
| AGTATTTATAAGAGCTTTGA+CGG | 0.399045 | 1_1:+11599584 | None:intergenic |
| TCAACAAAATCAAAATATAT+AGG | 0.400778 | 1_1:-11598886 | Msa0008040:CDS |
| GAAGATTTACACAAGATCAT+AGG | 0.406687 | 1_1:-11600724 | Msa0008040:five_prime_UTR |
| CAGATTGGTTGAAACATTGA+AGG | 0.425974 | 1_1:-11599613 | Msa0008040:CDS |
| TAGACTTGCGCCTGCTAAGT+AGG | 0.434681 | 1_1:+11598014 | None:intergenic |
| TGCAAGCTATTCAATCAAAT+AGG | 0.440167 | 1_1:+11597697 | None:intergenic |
| GAAGACGTTTACTCTTACTA+GGG | 0.455154 | 1_1:+11598044 | None:intergenic |
| AACATGGCCATAAAAGATTT+GGG | 0.462292 | 1_1:-11598513 | Msa0008040:intron |
| GTTTGATTTCTTGTCGGGCA+TGG | 0.462646 | 1_1:-11600688 | Msa0008040:five_prime_UTR |
| TTCTTAAGTCCCTACTTAGC+AGG | 0.464333 | 1_1:-11598024 | Msa0008040:CDS |
| AATGATCCGGTACGCGAAAG+TGG | 0.466249 | 1_1:+11598361 | None:intergenic |
| GAGTGACTTGTTAGATGAAA+AGG | 0.466681 | 1_1:-11599529 | Msa0008040:CDS |
| GCCAATCATCTTCATCATCT+AGG | 0.468564 | 1_1:+11598857 | None:intergenic |
| ACGTTTATCATGTATCGAAC+AGG | 0.471944 | 1_1:-11599481 | Msa0008040:intron |
| GTGGTCAGCAGCTGCACTTA+TGG | 0.472814 | 1_1:+11600523 | None:intergenic |
| TCTTTACAACCTCAGAGAGT+TGG | 0.476414 | 1_1:-11598558 | Msa0008040:CDS |
| AGGTTTCCACTTTCGCGTAC+CGG | 0.482355 | 1_1:-11598367 | Msa0008040:CDS |
| TGCATTTGAAGGACTTGTGG+TGG | 0.485150 | 1_1:+11598276 | None:intergenic |
| TTGGAAGCCATTCGAGGTAG+AGG | 0.487405 | 1_1:+11599940 | None:intergenic |
| TTCAATCAAATAGGCAAAGC+AGG | 0.495672 | 1_1:+11597706 | None:intergenic |
| TCTACCAGTCTTTGGTGTTG+TGG | 0.505674 | 1_1:+11598327 | None:intergenic |
| TTACTCATAGTTCTAAATTG+TGG | 0.507630 | 1_1:+11600504 | None:intergenic |
| GCTGATTTGCGCGGCTCCGA+AGG | 0.523701 | 1_1:+11598118 | None:intergenic |
| TGACACGTTATACACATACT+TGG | 0.525305 | 1_1:-11597984 | Msa0008040:CDS |
| TGTTGAGTTGGTACCATGCA+AGG | 0.528628 | 1_1:+11598903 | None:intergenic |
| ACTCTCTGAGGTTGTAAAGA+AGG | 0.529000 | 1_1:+11598561 | None:intergenic |
| TCTTGCATTTGAAGGACTTG+TGG | 0.532230 | 1_1:+11598273 | None:intergenic |
| TTCATTCACTTCACCCAACA+TGG | 0.537497 | 1_1:-11598529 | Msa0008040:CDS |
| ACCTAGATGATGAAGATGAT+TGG | 0.546777 | 1_1:-11598858 | Msa0008040:CDS |
| TAGCAGGCGCAAGTCTAAGA+AGG | 0.559475 | 1_1:-11598008 | Msa0008040:CDS |
| TCAGTTGGGGAGACCTTGCA+TGG | 0.559628 | 1_1:-11598916 | Msa0008040:intron |
| TCATAATTGGAAGCCATTCG+AGG | 0.561383 | 1_1:+11599934 | None:intergenic |
| GTTTACTCTTACTAGGGTGT+TGG | 0.563511 | 1_1:+11598050 | None:intergenic |
| AGACTTGCGCCTGCTAAGTA+GGG | 0.563669 | 1_1:+11598015 | None:intergenic |
| ACACTTGCCAATAGAATGCA+AGG | 0.571373 | 1_1:-11597938 | Msa0008040:three_prime_UTR |
| GGATCTACTTGACAATGATC+CGG | 0.571708 | 1_1:+11598348 | None:intergenic |
| CCTCATGATCCATAAAACCT+TGG | 0.572903 | 1_1:+11599132 | None:intergenic |
| TAGAGAATAAAGACATGCCA+AGG | 0.576912 | 1_1:-11599149 | Msa0008040:CDS |
| ATGAAGCACCGACACTTCAA+AGG | 0.578484 | 1_1:-11597862 | Msa0008040:three_prime_UTR |
| ACAAAATGTGGCTGCAACTG+CGG | 0.579244 | 1_1:-11600580 | Msa0008040:five_prime_UTR |
| TAGACTATCATCAAAGAGCA+AGG | 0.589354 | 1_1:+11599891 | None:intergenic |
| CGCATTGAAGCTGATTTGCG+CGG | 0.592705 | 1_1:+11598109 | None:intergenic |
| AGATCCACAACACCAAAGAC+TGG | 0.593009 | 1_1:-11598331 | Msa0008040:CDS |
| ATTTAGTACAACATGTGTGT+TGG | 0.593510 | 1_1:-11600748 | Msa0008040:five_prime_UTR |
| GATTGGCATCACTTCAGGAA+TGG | 0.593721 | 1_1:-11598841 | Msa0008040:intron |
| CAAACACACCTTTGAAGTGT+CGG | 0.595147 | 1_1:+11597854 | None:intergenic |
| AACACAACCTCTACCTCGAA+TGG | 0.597696 | 1_1:-11599947 | Msa0008040:CDS |
| AGCGGACAGTTTCGCCACAC+AGG | 0.598006 | 1_1:-11598387 | Msa0008040:CDS |
| TGAGGTTGTAAAGAAGGTGA+TGG | 0.601446 | 1_1:+11598567 | None:intergenic |
| TCCTTCAAATGCAAGAGTAA+GGG | 0.605270 | 1_1:-11598266 | Msa0008040:intron |
| CAAAGCTCTTATAAATACTG+TGG | 0.609357 | 1_1:-11599580 | Msa0008040:CDS |
| TTCGATACTGAAACAAAATG+TGG | 0.614629 | 1_1:-11600592 | Msa0008040:five_prime_UTR |
| AAACGCCAACGTCTACCTCA+AGG | 0.625238 | 1_1:-11598696 | Msa0008040:intron |
| ATGTATGTGAAATAGAGAAG+CGG | 0.632958 | 1_1:-11598405 | Msa0008040:intron |
| TTGTACCTTGAGGTAGACGT+TGG | 0.633325 | 1_1:+11598691 | None:intergenic |
| TGAGAAAATAAGAAACAGAG+AGG | 0.657237 | 1_1:+11597674 | None:intergenic |
| CGCGAAAGTGGAAACCTGTG+TGG | 0.665252 | 1_1:+11598373 | None:intergenic |
| TGATACGACATCAACACATG+TGG | 0.672406 | 1_1:-11597820 | Msa0008040:three_prime_UTR |
| AATCATCTTCATCATCTAGG+TGG | 0.697533 | 1_1:+11598860 | None:intergenic |
| ATAGTTCTAAATTACAAACG+CGG | 0.756645 | 1_1:-11600628 | Msa0008040:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTCTCAAAAATTTAA+GGG | + | chr1_1:11598485-11598504 | None:intergenic | 10.0% |
| !! | TAAAAATTCTCAAAAATTTA+AGG | + | chr1_1:11598486-11598505 | None:intergenic | 10.0% |
| !!! | CTATATCATTTTAATGAAAA+AGG | + | chr1_1:11597680-11597699 | None:intergenic | 15.0% |
| !! | TATTATCACAAATCAAAAAA+GGG | + | chr1_1:11598206-11598225 | None:intergenic | 15.0% |
| !! | ATATTATCACAAATCAAAAA+AGG | + | chr1_1:11598207-11598226 | None:intergenic | 15.0% |
| !!! | AAAAATAAAGAAGAGTATAA+AGG | + | chr1_1:11598665-11598684 | None:intergenic | 15.0% |
| !! | ATGAGTAATGTTAATATAAT+GGG | + | chr1_1:11599346-11599365 | None:intergenic | 15.0% |
| !! | TCAACAAAATCAAAATATAT+AGG | - | chr1_1:11599438-11599457 | Msa0008040:intron | 15.0% |
| !!! | TTGTATTTTCTTTATCATAG+TGG | - | chr1_1:11597875-11597894 | Msa0008040:three_prime_UTR | 20.0% |
| !!! | TATTTTAGAAGACAGATAAA+GGG | + | chr1_1:11597926-11597945 | None:intergenic | 20.0% |
| !!! | TTATTTTAGAAGACAGATAA+AGG | + | chr1_1:11597927-11597946 | None:intergenic | 20.0% |
| !!! | TTATCTGTCTTCTAAAATAA+TGG | - | chr1_1:11597927-11597946 | Msa0008040:three_prime_UTR | 20.0% |
| !!! | TGTTGTTGTTGTTATTAAAT+AGG | - | chr1_1:11597959-11597978 | Msa0008040:exon | 20.0% |
| !! | AAAAAAAAAAACCTCTTAAG+AGG | + | chr1_1:11598025-11598044 | None:intergenic | 20.0% |
| !!! | TAAATTTTGATTTGTGATAG+AGG | - | chr1_1:11598055-11598074 | Msa0008040:CDS | 20.0% |
| !!! | AAATTTTGATTTGTGATAGA+GGG | - | chr1_1:11598056-11598075 | Msa0008040:CDS | 20.0% |
| !! | TCAATGTTATTGATAAAAGT+AGG | - | chr1_1:11598306-11598325 | Msa0008040:CDS | 20.0% |
| !!! | AATTAACTCACATTTGTTTT+TGG | + | chr1_1:11598625-11598644 | None:intergenic | 20.0% |
| !!! | TTTGTATTTTATTTGCAGAT+TGG | - | chr1_1:11598696-11598715 | Msa0008040:intron | 20.0% |
| !! | GCTTATAACTTAATTGAAAA+CGG | + | chr1_1:11598984-11599003 | None:intergenic | 20.0% |
| !! | CATGAGTAATGTTAATATAA+TGG | + | chr1_1:11599347-11599366 | None:intergenic | 20.0% |
| !!! | ATATTTTGATTTTGTTGAGT+TGG | + | chr1_1:11599436-11599455 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTCCACTTTTAT+AGG | - | chr1_1:11599529-11599548 | Msa0008040:CDS | 20.0% |
| !! | AATCATGTTGTTATAGTAAA+GGG | - | chr1_1:11599728-11599747 | Msa0008040:CDS | 20.0% |
| !!! | TCTTTTGTTTGATTTCTTGT+CGG | - | chr1_1:11597630-11597649 | Msa0008040:three_prime_UTR | 25.0% |
| !!! | ATAGTTCTAAATTACAAACG+CGG | - | chr1_1:11597696-11597715 | Msa0008040:three_prime_UTR | 25.0% |
| !!! | GCAATATATAAAGGTTTTAG+AGG | + | chr1_1:11597779-11597798 | None:intergenic | 25.0% |
| ! | CTTATGGTTGCAATATATAA+AGG | + | chr1_1:11597788-11597807 | None:intergenic | 25.0% |
| !!! | TTACTCATAGTTCTAAATTG+TGG | + | chr1_1:11597823-11597842 | None:intergenic | 25.0% |
| !! | GCTTTTCATTTTGAACTATT+TGG | - | chr1_1:11597998-11598017 | Msa0008040:CDS | 25.0% |
| !!! | AATTTTGATTTGTGATAGAG+GGG | - | chr1_1:11598057-11598076 | Msa0008040:CDS | 25.0% |
| ! | AAAAGTAAACAAGATACAGT+TGG | + | chr1_1:11598252-11598271 | None:intergenic | 25.0% |
| ! | CATGAAAACTTCATCATAAT+TGG | + | chr1_1:11598406-11598425 | None:intergenic | 25.0% |
| ! | AAATTTAAGGGATGAATTAC+TGG | + | chr1_1:11598473-11598492 | None:intergenic | 25.0% |
| !!! | CTTTTTTCATCTACATTTCT+AGG | - | chr1_1:11598529-11598548 | Msa0008040:CDS | 25.0% |
| !! | AGTATTTATAAGAGCTTTGA+CGG | + | chr1_1:11598743-11598762 | None:intergenic | 25.0% |
| ! | ATAAATACTGTGGATCATTT+AGG | - | chr1_1:11598754-11598773 | Msa0008040:intron | 25.0% |
| !!! | TTTATTTCCATTAGCTTTTC+GGG | + | chr1_1:11599023-11599042 | None:intergenic | 25.0% |
| !!! | GTTTATTTCCATTAGCTTTT+CGG | + | chr1_1:11599024-11599043 | None:intergenic | 25.0% |
| ! | ATAAACTGAAAAACAGCTTA+TGG | - | chr1_1:11599038-11599057 | Msa0008040:intron | 25.0% |
| ! | GAAAGTAATGTGAAAAACTT+TGG | - | chr1_1:11599082-11599101 | Msa0008040:CDS | 25.0% |
| !! | AGCATAATTTTTCCATAATG+TGG | - | chr1_1:11599147-11599166 | Msa0008040:CDS | 25.0% |
| !! | ATATAACGTTTGTGATGTTT+TGG | + | chr1_1:11599250-11599269 | None:intergenic | 25.0% |
| ! | AATGTATTTATAAACTTGCC+TGG | + | chr1_1:11599277-11599296 | None:intergenic | 25.0% |
| ! | AGAATTTCAAAATAGAGTTG+AGG | + | chr1_1:11599302-11599321 | None:intergenic | 25.0% |
| ! | TCAATTTCACATATTCAGTT+GGG | - | chr1_1:11599394-11599413 | Msa0008040:intron | 25.0% |
| ! | AAGATTGTATCCTATAAAAG+TGG | + | chr1_1:11599542-11599561 | None:intergenic | 25.0% |
| ! | CAATCATGTTGTTATAGTAA+AGG | - | chr1_1:11599727-11599746 | Msa0008040:CDS | 25.0% |
| !! | TATAGTACCCAAATCTTTTA+TGG | + | chr1_1:11599821-11599840 | None:intergenic | 25.0% |
| !! | GTAACTATTTTATTCTGAAC+TGG | - | chr1_1:11599882-11599901 | Msa0008040:intron | 25.0% |
| ! | ACATTAAAACGTGAATATTG+TGG | - | chr1_1:11600140-11600159 | Msa0008040:intron | 25.0% |
| ! | AAAGAACAAAAACTACGTAA+AGG | - | chr1_1:11600422-11600441 | Msa0008040:intron | 25.0% |
| ! | AAGAACAAAAACTACGTAAA+GGG | - | chr1_1:11600423-11600442 | Msa0008040:intron | 25.0% |
| ! | ACAATAGTAGTTGAAGAAAA+TGG | + | chr1_1:11600546-11600565 | None:intergenic | 25.0% |
| ATTTAGTACAACATGTGTGT+TGG | - | chr1_1:11597576-11597595 | Msa0008040:three_prime_UTR | 30.0% | |
| GAAGATTTACACAAGATCAT+AGG | - | chr1_1:11597600-11597619 | Msa0008040:three_prime_UTR | 30.0% | |
| !! | CTTTTGTTTGATTTCTTGTC+GGG | - | chr1_1:11597631-11597650 | Msa0008040:three_prime_UTR | 30.0% |
| TTCGATACTGAAACAAAATG+TGG | - | chr1_1:11597732-11597751 | Msa0008040:three_prime_UTR | 30.0% | |
| !! | CTTCTAAAATAATGGTTGAC+TGG | - | chr1_1:11597935-11597954 | Msa0008040:three_prime_UTR | 30.0% |
| !!! | CATTTGTTTTTGGTCATCAT+TGG | + | chr1_1:11598615-11598634 | None:intergenic | 30.0% |
| CAAAGCTCTTATAAATACTG+TGG | - | chr1_1:11598744-11598763 | Msa0008040:intron | 30.0% | |
| TAACAAGTCACTCACTTTAT+AGG | + | chr1_1:11598788-11598807 | None:intergenic | 30.0% | |
| TACTTTCTTAAGTGCCTTAT+TGG | + | chr1_1:11599069-11599088 | None:intergenic | 30.0% | |
| AACTTTGGTGAATTTCCATT+TGG | - | chr1_1:11599097-11599116 | Msa0008040:CDS | 30.0% | |
| ! | AAACGTAACAGTTTTCCAAA+TGG | + | chr1_1:11599115-11599134 | None:intergenic | 30.0% |
| TTCTCTAATGTACCACATTA+TGG | + | chr1_1:11599162-11599181 | None:intergenic | 30.0% | |
| CTCAATTTCACATATTCAGT+TGG | - | chr1_1:11599393-11599412 | Msa0008040:intron | 30.0% | |
| CAATTTCACATATTCAGTTG+GGG | - | chr1_1:11599395-11599414 | Msa0008040:intron | 30.0% | |
| TGTGCAGTTTAATTGAGAAT+TGG | + | chr1_1:11599685-11599704 | None:intergenic | 30.0% | |
| ! | AAATCTTTTATGGCCATGTT+GGG | + | chr1_1:11599811-11599830 | None:intergenic | 30.0% |
| AACATGGCCATAAAAGATTT+GGG | - | chr1_1:11599811-11599830 | Msa0008040:intron | 30.0% | |
| ATGTATGTGAAATAGAGAAG+CGG | - | chr1_1:11599919-11599938 | Msa0008040:CDS | 30.0% | |
| ! | AAAAACTACGTAAAGGGTTT+TGG | - | chr1_1:11600429-11600448 | Msa0008040:intron | 30.0% |
| ! | AAAACTACGTAAAGGGTTTT+GGG | - | chr1_1:11600430-11600449 | Msa0008040:intron | 30.0% |
| !!! | GTGTCGTTTTAGTGTTATAT+AGG | - | chr1_1:11600586-11600605 | Msa0008040:five_prime_UTR | 30.0% |
| TGCAAGCTATTCAATCAAAT+AGG | + | chr1_1:11600630-11600649 | None:intergenic | 30.0% | |
| TGAGAAAATAAGAAACAGAG+AGG | + | chr1_1:11600653-11600672 | None:intergenic | 30.0% | |
| TAGAAGACAGATAAAGGGAA+AGG | + | chr1_1:11597921-11597940 | None:intergenic | 35.0% | |
| AACTATTTGGACCTCTTAAG+AGG | - | chr1_1:11598011-11598030 | Msa0008040:CDS | 35.0% | |
| GTTGCATACAATACACCAAA+TGG | - | chr1_1:11598128-11598147 | Msa0008040:intron | 35.0% | |
| CATACAATACACCAAATGGT+GGG | - | chr1_1:11598132-11598151 | Msa0008040:intron | 35.0% | |
| TGAATGAAAAAGGTGGAAGA+AGG | + | chr1_1:11598344-11598363 | None:intergenic | 35.0% | |
| !! | TCTTCCACCTTTTTCATTCA+TGG | - | chr1_1:11598344-11598363 | Msa0008040:CDS | 35.0% |
| !! | CTTCCACCTTTTTCATTCAT+GGG | - | chr1_1:11598345-11598364 | Msa0008040:CDS | 35.0% |
| !! | TTCCACCTTTTTCATTCATG+GGG | - | chr1_1:11598346-11598365 | Msa0008040:CDS | 35.0% |
| ATCTTCCCCATGAATGAAAA+AGG | + | chr1_1:11598354-11598373 | None:intergenic | 35.0% | |
| TAGACTATCATCAAAGAGCA+AGG | + | chr1_1:11598436-11598455 | None:intergenic | 35.0% | |
| ! | GCTCTTTGATGATAGTCTAA+TGG | - | chr1_1:11598437-11598456 | Msa0008040:intron | 35.0% |
| ! | CAGATTGGTTGAAACATTGA+AGG | - | chr1_1:11598711-11598730 | Msa0008040:CDS | 35.0% |
| !! | GAGTGACTTGTTAGATGAAA+AGG | - | chr1_1:11598795-11598814 | Msa0008040:intron | 35.0% |
| ! | GAAAAGGTCACTGAAGTTTT+TGG | - | chr1_1:11598811-11598830 | Msa0008040:intron | 35.0% |
| ACGTTTATCATGTATCGAAC+AGG | - | chr1_1:11598843-11598862 | Msa0008040:CDS | 35.0% | |
| TAGAGAATAAAGACATGCCA+AGG | - | chr1_1:11599175-11599194 | Msa0008040:intron | 35.0% | |
| ! | AAAGACATGCCAAGGTTTTA+TGG | - | chr1_1:11599183-11599202 | Msa0008040:intron | 35.0% |
| !! | CAAGGTTTTATGGATCATGA+GGG | - | chr1_1:11599193-11599212 | Msa0008040:intron | 35.0% |
| !! | AAGGTTTTATGGATCATGAG+GGG | - | chr1_1:11599194-11599213 | Msa0008040:intron | 35.0% |
| ! | CACAAACGTTATATTTTGCC+AGG | - | chr1_1:11599256-11599275 | Msa0008040:intron | 35.0% |
| AATCATCTTCATCATCTAGG+TGG | + | chr1_1:11599467-11599486 | None:intergenic | 35.0% | |
| ACCTAGATGATGAAGATGAT+TGG | - | chr1_1:11599466-11599485 | Msa0008040:intron | 35.0% | |
| !! | CTGATTTTGTTTGTACCTTG+AGG | + | chr1_1:11599646-11599665 | None:intergenic | 35.0% |
| ! | CAAATCTTTTATGGCCATGT+TGG | + | chr1_1:11599812-11599831 | None:intergenic | 35.0% |
| CAACATGGCCATAAAAGATT+TGG | - | chr1_1:11599810-11599829 | Msa0008040:intron | 35.0% | |
| TCCTTCAAATGCAAGAGTAA+GGG | - | chr1_1:11600058-11600077 | Msa0008040:intron | 35.0% | |
| GAAGACGTTTACTCTTACTA+GGG | + | chr1_1:11600283-11600302 | None:intergenic | 35.0% | |
| AGAAGACGTTTACTCTTACT+AGG | + | chr1_1:11600284-11600303 | None:intergenic | 35.0% | |
| TGACACGTTATACACATACT+TGG | - | chr1_1:11600340-11600359 | Msa0008040:intron | 35.0% | |
| ACTCTTTCCTTGCATTCTAT+TGG | + | chr1_1:11600396-11600415 | None:intergenic | 35.0% | |
| TTCAATCAAATAGGCAAAGC+AGG | + | chr1_1:11600621-11600640 | None:intergenic | 35.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1_1:11598102-11598121 | Msa0008040:CDS | 40.0% | |
| GCATACAATACACCAAATGG+TGG | - | chr1_1:11598131-11598150 | Msa0008040:intron | 40.0% | |
| CAAATCAAAAAAGGGCAACC+CGG | + | chr1_1:11598198-11598217 | None:intergenic | 40.0% | |
| TTCCCCATGAATGAAAAAGG+TGG | + | chr1_1:11598351-11598370 | None:intergenic | 40.0% | |
| TCATAATTGGAAGCCATTCG+AGG | + | chr1_1:11598393-11598412 | None:intergenic | 40.0% | |
| AAGCTATCCCGAAAAGCTAA+TGG | - | chr1_1:11599013-11599032 | Msa0008040:intron | 40.0% | |
| AGCTTATGGACTTGCCAATA+AGG | - | chr1_1:11599052-11599071 | Msa0008040:intron | 40.0% | |
| CCTCATGATCCATAAAACCT+TGG | + | chr1_1:11599195-11599214 | None:intergenic | 40.0% | |
| !! | CCAAGGTTTTATGGATCATG+AGG | - | chr1_1:11599192-11599211 | Msa0008040:intron | 40.0% |
| GCCAATCATCTTCATCATCT+AGG | + | chr1_1:11599470-11599489 | None:intergenic | 40.0% | |
| AAGATGATTGGCATCACTTC+AGG | - | chr1_1:11599478-11599497 | Msa0008040:intron | 40.0% | |
| TGAGGTTGTAAAGAAGGTGA+TGG | + | chr1_1:11599760-11599779 | None:intergenic | 40.0% | |
| !! | ACTCTCTGAGGTTGTAAAGA+AGG | + | chr1_1:11599766-11599785 | None:intergenic | 40.0% |
| TCTTTACAACCTCAGAGAGT+TGG | - | chr1_1:11599766-11599785 | Msa0008040:CDS | 40.0% | |
| TTCATTCACTTCACCCAACA+TGG | - | chr1_1:11599795-11599814 | Msa0008040:intron | 40.0% | |
| GGATCTACTTGACAATGATC+CGG | + | chr1_1:11599979-11599998 | None:intergenic | 40.0% | |
| GTAGTTGATCTACCAGTCTT+TGG | + | chr1_1:11600008-11600027 | None:intergenic | 40.0% | |
| TCTTGCATTTGAAGGACTTG+TGG | + | chr1_1:11600054-11600073 | None:intergenic | 40.0% | |
| GTCCTTCAAATGCAAGAGTA+AGG | - | chr1_1:11600057-11600076 | Msa0008040:intron | 40.0% | |
| ACCCTTACTCTTGCATTTGA+AGG | + | chr1_1:11600062-11600081 | None:intergenic | 40.0% | |
| AATGCAAGAGTAAGGGTAAG+TGG | - | chr1_1:11600065-11600084 | Msa0008040:intron | 40.0% | |
| TCCTTTCTTGCAGTATCCTT+CGG | - | chr1_1:11600190-11600209 | Msa0008040:intron | 40.0% | |
| GTTTACTCTTACTAGGGTGT+TGG | + | chr1_1:11600277-11600296 | None:intergenic | 40.0% | |
| TTCTTAAGTCCCTACTTAGC+AGG | - | chr1_1:11600300-11600319 | Msa0008040:intron | 40.0% | |
| ACACTTGCCAATAGAATGCA+AGG | - | chr1_1:11600386-11600405 | Msa0008040:intron | 40.0% | |
| !! | CAAACACACCTTTGAAGTGT+CGG | + | chr1_1:11600473-11600492 | None:intergenic | 40.0% |
| TGATACGACATCAACACATG+TGG | - | chr1_1:11600504-11600523 | Msa0008040:intron | 40.0% | |
| ! | GTTTGATTTCTTGTCGGGCA+TGG | - | chr1_1:11597636-11597655 | Msa0008040:three_prime_UTR | 45.0% |
| ACAAAATGTGGCTGCAACTG+CGG | - | chr1_1:11597744-11597763 | Msa0008040:three_prime_UTR | 45.0% | |
| TTGTGATAGAGGGGTAACCT+TGG | - | chr1_1:11598066-11598085 | Msa0008040:CDS | 45.0% | |
| CAACTTTACAAGTTGCGCCA+AGG | + | chr1_1:11598086-11598105 | None:intergenic | 45.0% | |
| AACACAACCTCTACCTCGAA+TGG | - | chr1_1:11598377-11598396 | Msa0008040:CDS | 45.0% | |
| !! | TGTTGAGTTGGTACCATGCA+AGG | + | chr1_1:11599424-11599443 | None:intergenic | 45.0% |
| GATTGGCATCACTTCAGGAA+TGG | - | chr1_1:11599483-11599502 | Msa0008040:CDS | 45.0% | |
| TTGTACCTTGAGGTAGACGT+TGG | + | chr1_1:11599636-11599655 | None:intergenic | 45.0% | |
| GAAAAAGCTCCAACTCTCTG+AGG | + | chr1_1:11599778-11599797 | None:intergenic | 45.0% | |
| AGATCCACAACACCAAAGAC+TGG | - | chr1_1:11599993-11600012 | Msa0008040:CDS | 45.0% | |
| !! | TCTACCAGTCTTTGGTGTTG+TGG | + | chr1_1:11600000-11600019 | None:intergenic | 45.0% |
| ! | GTGGATCTGTTGCTTGAGTT+TGG | + | chr1_1:11600032-11600051 | None:intergenic | 45.0% |
| TGCATTTGAAGGACTTGTGG+TGG | + | chr1_1:11600051-11600070 | None:intergenic | 45.0% | |
| TCCGAAGGATACTGCAAGAA+AGG | + | chr1_1:11600194-11600213 | None:intergenic | 45.0% | |
| !! | ATGAAGCACCGACACTTCAA+AGG | - | chr1_1:11600462-11600481 | Msa0008040:intron | 45.0% |
| ! | CGACACTTCAAAGGTGTGTT+TGG | - | chr1_1:11600471-11600490 | Msa0008040:intron | 45.0% |
| CATATGCAGGGTCCAGGAAA+GGG | + | chr1_1:11598159-11598178 | None:intergenic | 50.0% | |
| TTTCCTGGACCCTGCATATG+CGG | - | chr1_1:11598159-11598178 | Msa0008040:intron | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr1_1:11598171-11598190 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr1_1:11598172-11598191 | None:intergenic | 50.0% | |
| ! | ATGCGGGAGCTTTAGTACAC+CGG | - | chr1_1:11598176-11598195 | Msa0008040:intron | 50.0% |
| TTGGAAGCCATTCGAGGTAG+AGG | + | chr1_1:11598387-11598406 | None:intergenic | 50.0% | |
| AAACGCCAACGTCTACCTCA+AGG | - | chr1_1:11599628-11599647 | Msa0008040:intron | 50.0% | |
| AGGTTTCCACTTTCGCGTAC+CGG | - | chr1_1:11599957-11599976 | Msa0008040:CDS | 50.0% | |
| AATGATCCGGTACGCGAAAG+TGG | + | chr1_1:11599966-11599985 | None:intergenic | 50.0% | |
| !! | CGCATTGAAGCTGATTTGCG+CGG | + | chr1_1:11600218-11600237 | None:intergenic | 50.0% |
| AGACTTGCGCCTGCTAAGTA+GGG | + | chr1_1:11600312-11600331 | None:intergenic | 50.0% | |
| TAGACTTGCGCCTGCTAAGT+AGG | + | chr1_1:11600313-11600332 | None:intergenic | 50.0% | |
| TAGCAGGCGCAAGTCTAAGA+AGG | - | chr1_1:11600316-11600335 | Msa0008040:intron | 50.0% | |
| GTGGTCAGCAGCTGCACTTA+TGG | + | chr1_1:11597804-11597823 | None:intergenic | 55.0% | |
| CAGGAAAGGGTCCCACCATT+TGG | + | chr1_1:11598146-11598165 | None:intergenic | 55.0% | |
| ! | CAAATGGTGGGACCCTTTCC+TGG | - | chr1_1:11598144-11598163 | Msa0008040:intron | 55.0% |
| GCATATGCAGGGTCCAGGAA+AGG | + | chr1_1:11598160-11598179 | None:intergenic | 55.0% | |
| TTCCTGGACCCTGCATATGC+GGG | - | chr1_1:11598160-11598179 | Msa0008040:intron | 55.0% | |
| ! | TGCGGGAGCTTTAGTACACC+GGG | - | chr1_1:11598177-11598196 | Msa0008040:intron | 55.0% |
| TCAGTTGGGGAGACCTTGCA+TGG | - | chr1_1:11599408-11599427 | Msa0008040:intron | 55.0% | |
| CGCGAAAGTGGAAACCTGTG+TGG | + | chr1_1:11599954-11599973 | None:intergenic | 55.0% | |
| AGCGGACAGTTTCGCCACAC+AGG | - | chr1_1:11599937-11599956 | Msa0008040:CDS | 60.0% | |
| CTCCCGCATATGCAGGGTCC+AGG | + | chr1_1:11598165-11598184 | None:intergenic | 65.0% | |
| !! | GCTGATTTGCGCGGCTCCGA+AGG | + | chr1_1:11600209-11600228 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 11597553 | 11600793 | 11597553 | ID=Msa0008040;Name=Msa0008040 |
| chr1_1 | mRNA | 11597553 | 11600793 | 11597553 | ID=Msa0008040-mRNA-1;Parent=Msa0008040;Name=Msa0008040-mRNA-1;_AED=0.16;_eAED=0.16;_QI=282|1|1|1|0.88|0.8|10|420|336 |
| chr1_1 | exon | 11597553 | 11598143 | 11597553 | ID=Msa0008040-mRNA-1:exon:4301;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11598267 | 11598412 | 11598267 | ID=Msa0008040-mRNA-1:exon:4300;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11598514 | 11598602 | 11598514 | ID=Msa0008040-mRNA-1:exon:4299;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11598697 | 11598739 | 11598697 | ID=Msa0008040-mRNA-1:exon:4298;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11598842 | 11598934 | 11598842 | ID=Msa0008040-mRNA-1:exon:4297;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11599069 | 11599168 | 11599069 | ID=Msa0008040-mRNA-1:exon:4296;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11599482 | 11599632 | 11599482 | ID=Msa0008040-mRNA-1:exon:4295;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11599713 | 11599795 | 11599713 | ID=Msa0008040-mRNA-1:exon:4294;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11599888 | 11600018 | 11599888 | ID=Msa0008040-mRNA-1:exon:4293;Parent=Msa0008040-mRNA-1 |
| chr1_1 | exon | 11600508 | 11600793 | 11600508 | ID=Msa0008040-mRNA-1:exon:4292;Parent=Msa0008040-mRNA-1 |
| chr1_1 | five_prime_UTR | 11600512 | 11600793 | 11600512 | ID=Msa0008040-mRNA-1:five_prime_utr;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11600508 | 11600511 | 11600508 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11599888 | 11600018 | 11599888 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11599713 | 11599795 | 11599713 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11599482 | 11599632 | 11599482 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11599069 | 11599168 | 11599069 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11598842 | 11598934 | 11598842 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11598697 | 11598739 | 11598697 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11598514 | 11598602 | 11598514 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11598267 | 11598412 | 11598267 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | CDS | 11597973 | 11598143 | 11597973 | ID=Msa0008040-mRNA-1:cds;Parent=Msa0008040-mRNA-1 |
| chr1_1 | three_prime_UTR | 11597553 | 11597972 | 11597553 | ID=Msa0008040-mRNA-1:three_prime_utr;Parent=Msa0008040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
