Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250870 | XP_013469779.1 | 97.318 | 261 | 7 | 0 | 1 | 261 | 1 | 261 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250870 | sp|Q8GTE3|RS3A_CICAR | 92.720 | 261 | 19 | 0 | 1 | 261 | 1 | 261 | 3.16e-175 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250870 | B7FLW8 | 97.318 | 261 | 7 | 0 | 1 | 261 | 1 | 261 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0250870 | 0.850298 | 1.858298e-60 | -8.615850e-47 |
| Msa0002790 | Msa0250870 | 0.808134 | 3.594886e-50 | -8.615850e-47 |
| Msa0003780 | Msa0250870 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0044890 | Msa0250870 | 0.801213 | 1.000982e-48 | -8.615850e-47 |
| Msa0068970 | Msa0250870 | 0.803402 | 3.545866e-49 | -8.615850e-47 |
| Msa0086750 | Msa0250870 | 0.813641 | 2.309886e-51 | -8.615850e-47 |
| Msa0146340 | Msa0250870 | 0.821467 | 3.975901e-53 | -8.615850e-47 |
| Msa0183090 | Msa0250870 | 0.827137 | 1.846723e-54 | -8.615850e-47 |
| Msa0184650 | Msa0250870 | 0.850533 | 1.597189e-60 | -8.615850e-47 |
| Msa0189700 | Msa0250870 | 0.819948 | 8.881858e-53 | -8.615850e-47 |
| Msa0210330 | Msa0250870 | 0.824716 | 6.942271e-54 | -8.615850e-47 |
| Msa0210360 | Msa0250870 | 0.835062 | 2.088504e-56 | -8.615850e-47 |
| Msa0232010 | Msa0250870 | 0.821553 | 3.798872e-53 | -8.615850e-47 |
| Msa0232080 | Msa0250870 | 0.821767 | 3.389661e-53 | -8.615850e-47 |
| Msa0250820 | Msa0250870 | 0.949574 | 9.656385e-108 | -8.615850e-47 |
| Msa0250870 | Msa0264010 | 0.852880 | 3.451970e-61 | -8.615850e-47 |
| Msa0250870 | Msa0289580 | 0.837263 | 5.762636e-57 | -8.615850e-47 |
| Msa0250870 | Msa0289610 | 0.831253 | 1.853751e-55 | -8.615850e-47 |
| Msa0250870 | Msa0327300 | 0.824555 | 7.575121e-54 | -8.615850e-47 |
| Msa0250870 | Msa0327330 | 0.841510 | 4.548882e-58 | -8.615850e-47 |
| Msa0250870 | Msa0342850 | 0.869435 | 3.104144e-66 | -8.615850e-47 |
| Msa0250870 | Msa0486070 | 0.806677 | 7.324329e-50 | -8.615850e-47 |
| Msa0250870 | Msa0606580 | 0.801401 | 9.161298e-49 | -8.615850e-47 |
| Msa0250870 | Msa0685460 | 0.805453 | 1.325283e-49 | -8.615850e-47 |
| Msa0250870 | Msa0789930 | 0.804701 | 1.903772e-49 | -8.615850e-47 |
| Msa0250870 | Msa0881290 | 0.819536 | 1.103024e-52 | -8.615850e-47 |
| Msa0250870 | Msa0953310 | 0.820442 | 6.845484e-53 | -8.615850e-47 |
| Msa0250870 | Msa1078870 | 0.839080 | 1.961803e-57 | -8.615850e-47 |
| Msa0250870 | Msa1078980 | 0.825914 | 3.614489e-54 | -8.615850e-47 |
| Msa0250870 | Msa1079920 | 0.848387 | 6.333226e-60 | -8.615850e-47 |
| Msa0250870 | Msa1080350 | 0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa0250870 | Msa1081340 | 0.834701 | 2.573632e-56 | -8.615850e-47 |
| Msa0250870 | Msa1088940 | 0.813828 | 2.100235e-51 | -8.615850e-47 |
| Msa0250870 | Msa1124850 | 0.843429 | 1.408662e-58 | -8.615850e-47 |
| Msa0250870 | Msa1125860 | 0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa0250870 | Msa1128120 | 0.877994 | 4.019487e-69 | -8.615850e-47 |
| Msa0250870 | Msa1165580 | 0.822517 | 2.270362e-53 | -8.615850e-47 |
| Msa0250870 | Msa1169180 | 0.837261 | 5.771195e-57 | -8.615850e-47 |
| Msa0250870 | Msa1208330 | 0.806245 | 9.032868e-50 | -8.615850e-47 |
| Msa0250870 | Msa1213480 | 0.803463 | 3.444119e-49 | -8.615850e-47 |
| Msa0250870 | Msa1215820 | 0.852098 | 5.768905e-61 | -8.615850e-47 |
| Msa0250870 | Msa1295150 | 0.822418 | 2.394496e-53 | -8.615850e-47 |
| Msa0250870 | Msa1295170 | 0.856322 | 3.478486e-62 | -8.615850e-47 |
| Msa0250870 | Msa1300380 | 0.801721 | 7.876124e-49 | -8.615850e-47 |
| Msa0250870 | Msa1332250 | 0.809126 | 2.207816e-50 | -8.615850e-47 |
| Msa0250870 | Msa1338190 | 0.824219 | 9.088216e-54 | -8.615850e-47 |
| Msa0250870 | Msa1343260 | 0.828873 | 7.058717e-55 | -8.615850e-47 |
| Msa0250870 | Msa1362210 | 0.808885 | 2.485766e-50 | -8.615850e-47 |
| Msa0250870 | Msa1407070 | 0.809644 | 1.708559e-50 | -8.615850e-47 |
| Msa0250870 | Msa1418760 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
| Msa0250870 | Msa1426120 | 0.832395 | 9.686265e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250870 | MtrunA17_Chr1g0204941 | 97.318 | 261 | 7 | 0 | 1 | 261 | 1 | 261 | 0.0 | 527 |
| Msa0250870 | MtrunA17_Chr3g0081171 | 95.019 | 261 | 13 | 0 | 1 | 261 | 1 | 261 | 2.15e-179 | 493 |
| Msa0250870 | MtrunA17_Chr5g0394611 | 94.636 | 261 | 14 | 0 | 1 | 261 | 1 | 261 | 7.11e-179 | 492 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250870 | AT3G04840.1 | 85.115 | 262 | 38 | 1 | 1 | 261 | 1 | 262 | 1.12e-163 | 454 |
| Msa0250870 | AT4G34670.1 | 85.496 | 262 | 37 | 1 | 1 | 261 | 1 | 262 | 3.09e-163 | 453 |
Find 90 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAAACTTGGGAGCTTTA+AGG | 0.168578 | 2_2:-39931181 | None:intergenic |
| AATATCATACCAATCCTTCT+TGG | 0.295389 | 2_2:-39929210 | None:intergenic |
| CATATTAGTTTGTTCAAATT+CGG | 0.307811 | 2_2:+39931986 | Msa0250870:three_prime_UTR |
| GAAGGATTGGTATGATATTA+AGG | 0.312711 | 2_2:+39929214 | Msa0250870:CDS |
| GTTTCTCACCCCAAGTCTTT+TGG | 0.335249 | 2_2:+39931888 | Msa0250870:three_prime_UTR |
| CTGACTAGATTGTGCATAAC+AGG | 0.339955 | 2_2:-39930765 | None:intergenic |
| AAAGCTCCCAAGTTTGATCT+TGG | 0.357514 | 2_2:+39931185 | Msa0250870:CDS |
| TAAGAACAAGCGGATCTCTA+AGG | 0.365175 | 2_2:+39929057 | Msa0250870:CDS |
| GTTTGATCTTGGAAAATTGA+TGG | 0.369245 | 2_2:+39931196 | Msa0250870:CDS |
| GAAATTGTTGGAGCTTGATT+TGG | 0.369823 | 2_2:+39931702 | Msa0250870:exon |
| CCCTAAAACGGTGCCATTGT+TGG | 0.380678 | 2_2:+39928963 | Msa0250870:five_prime_UTR |
| AAATTCATTCCCGAGATGAT+TGG | 0.381702 | 2_2:+39931089 | Msa0250870:CDS |
| GGGACGAAGACCATGCATTC+AGG | 0.393353 | 2_2:+39930438 | Msa0250870:CDS |
| ATCCTGTGATTTGAAGGAAT+TGG | 0.402781 | 2_2:+39931061 | Msa0250870:CDS |
| GACCCTCGTGTCTCGTACTC+AGG | 0.406163 | 2_2:+39929271 | Msa0250870:CDS |
| TACCAATCCTTCTTGGCAAA+TGG | 0.412105 | 2_2:-39929203 | None:intergenic |
| TAGAGTGTTTGAGGTTTCAT+TGG | 0.413434 | 2_2:+39930403 | Msa0250870:CDS |
| GTTTCATTGGCTGATCTTCA+AGG | 0.434675 | 2_2:+39930416 | Msa0250870:CDS |
| TGCTGATCCATTTGCCAAGA+AGG | 0.436339 | 2_2:+39929196 | Msa0250870:CDS |
| AATTCATTCCCGAGATGATT+GGG | 0.437177 | 2_2:+39931090 | Msa0250870:CDS |
| AGCATCATCCTGTGATTTGA+AGG | 0.439297 | 2_2:+39931055 | Msa0250870:CDS |
| TCCATCACCATTTCATCAGC+AGG | 0.439649 | 2_2:-39931669 | None:intergenic |
| TACCAAGAGGAGAGCTAACC+AGG | 0.440122 | 2_2:+39930733 | Msa0250870:CDS |
| ACTCAAGCATAGAGTGTTTG+AGG | 0.454600 | 2_2:+39930394 | Msa0250870:CDS |
| ACCATGCATTCAGGAAGATT+AGG | 0.462005 | 2_2:+39930447 | Msa0250870:CDS |
| ATCCATTTGCCAAGAAGGAT+TGG | 0.465718 | 2_2:+39929201 | Msa0250870:CDS |
| GAGGAACCTACTGAAATTGT+TGG | 0.471628 | 2_2:+39931690 | Msa0250870:CDS |
| ATCTCCTTCCCAATCATCTC+GGG | 0.483111 | 2_2:-39931098 | None:intergenic |
| TGTTCAGATCCGTAGGAAGA+TGG | 0.490433 | 2_2:+39931013 | Msa0250870:intron |
| CACCTGGTTAGCTCTCCTCT+TGG | 0.502596 | 2_2:-39930735 | None:intergenic |
| AACTGACAAACTGAGGTCAT+TGG | 0.506332 | 2_2:+39930625 | Msa0250870:CDS |
| TGAGGTCATTGGTGCGTAAG+TGG | 0.507827 | 2_2:+39930636 | Msa0250870:CDS |
| CGGATCTCTAAGGGGAAGAA+AGG | 0.516719 | 2_2:+39929067 | Msa0250870:CDS |
| AAGAACAAGCGGATCTCTAA+GGG | 0.521243 | 2_2:+39929058 | Msa0250870:CDS |
| CTTGTTCTTACCAACGGCCA+TGG | 0.523346 | 2_2:-39929044 | None:intergenic |
| TTTCATTGGCTGATCTTCAA+GGG | 0.523908 | 2_2:+39930417 | Msa0250870:CDS |
| GGACGCAAAACCAAAAGACT+TGG | 0.524592 | 2_2:-39931898 | None:intergenic |
| TCATCTCGGGAATGAATTTG+CGG | 0.528925 | 2_2:-39931085 | None:intergenic |
| GGTATCATAAAACCCTAAAA+CGG | 0.529634 | 2_2:+39928951 | None:intergenic |
| AGAGAGGCCTGCTGATGAAA+TGG | 0.532099 | 2_2:+39931662 | Msa0250870:CDS |
| TCTTGCCGACATTCTTCACC+TGG | 0.534041 | 2_2:-39929250 | None:intergenic |
| AATCTCCTTCCCAATCATCT+CGG | 0.535678 | 2_2:-39931099 | None:intergenic |
| GACGCAAAACCAAAAGACTT+GGG | 0.538880 | 2_2:-39931897 | None:intergenic |
| CGGATGAACACATTCTGCAA+GGG | 0.539130 | 2_2:-39931146 | None:intergenic |
| TTGCGAGCTGAAGATGTTCA+AGG | 0.539824 | 2_2:+39930470 | Msa0250870:CDS |
| ACCTAATCTTCCTGAATGCA+TGG | 0.543936 | 2_2:-39930448 | None:intergenic |
| TCAAATCACAGGATGATGCT+TGG | 0.544201 | 2_2:-39931052 | None:intergenic |
| CATAACAGGTCCTCTTCACC+TGG | 0.545447 | 2_2:-39930751 | None:intergenic |
| GGAGAGCTAACCAGGTGAAG+AGG | 0.557404 | 2_2:+39930741 | Msa0250870:CDS |
| GAATGACAGATTGCTTCAGA+TGG | 0.560187 | 2_2:+39930371 | Msa0250870:intron |
| CTCTGAGGATGTTGGCACAA+AGG | 0.562498 | 2_2:+39931638 | Msa0250870:CDS |
| CTTTATTTGTTCAGATCCGT+AGG | 0.563835 | 2_2:+39931006 | Msa0250870:intron |
| GTTTCACTGTTTGCAGAGTG+CGG | 0.564928 | 2_2:-39929022 | None:intergenic |
| GATCCGCTTGTTCTTACCAA+CGG | 0.569816 | 2_2:-39929050 | None:intergenic |
| GACCAATTCCTTCAAATCAC+AGG | 0.574407 | 2_2:-39931063 | None:intergenic |
| TCGGATGAACACATTCTGCA+AGG | 0.575354 | 2_2:-39931147 | None:intergenic |
| GCCTGCTGATGAAATGGTGA+TGG | 0.579691 | 2_2:+39931668 | Msa0250870:CDS |
| ACAATCTAGTCAGATTAGAC+AGG | 0.580594 | 2_2:+39930775 | Msa0250870:CDS |
| CAAGCTCCAACAATTTCAGT+AGG | 0.582102 | 2_2:-39931696 | None:intergenic |
| GGAGATTACTCTGAGGATGT+TGG | 0.587473 | 2_2:+39931630 | Msa0250870:CDS |
| TTCTTCACCTGGAAAACTGA+AGG | 0.588083 | 2_2:-39929239 | None:intergenic |
| TGATCTCAACCATCTTCCTA+CGG | 0.590794 | 2_2:-39931022 | None:intergenic |
| TTCATTGGCTGATCTTCAAG+GGG | 0.595752 | 2_2:+39930418 | Msa0250870:CDS |
| CAGTAGTCTTGACATCCACA+TGG | 0.596992 | 2_2:-39930676 | None:intergenic |
| AACAGTGAAACCATGGCCGT+TGG | 0.599680 | 2_2:+39929034 | Msa0250870:exon |
| TGCGAGCTGAAGATGTTCAA+GGG | 0.601150 | 2_2:+39930471 | Msa0250870:CDS |
| CATTCCCGAGATGATTGGGA+AGG | 0.605231 | 2_2:+39931094 | Msa0250870:CDS |
| TGATCTTGGAAAATTGATGG+AGG | 0.612140 | 2_2:+39931199 | Msa0250870:CDS |
| ACCCTCGTGTCTCGTACTCA+GGG | 0.615233 | 2_2:+39929272 | Msa0250870:CDS |
| CTCTGCAAACAGTGAAACCA+TGG | 0.618251 | 2_2:+39929027 | Msa0250870:exon |
| ATCTCTAAGGGGAAGAAAGG+TGG | 0.621403 | 2_2:+39929070 | Msa0250870:CDS |
| AACTCTTGTTGAAGCCCATG+TGG | 0.622205 | 2_2:+39930661 | Msa0250870:CDS |
| GTCTCGTACTCAGGGTACCA+AGG | 0.623684 | 2_2:+39929280 | Msa0250870:CDS |
| TGGCCGTTGGTAAGAACAAG+CGG | 0.624911 | 2_2:+39929047 | Msa0250870:CDS |
| TGCTGATGAAATGGTGATGG+AGG | 0.627255 | 2_2:+39931671 | Msa0250870:CDS |
| GGATGAACACATTCTGCAAG+GGG | 0.631103 | 2_2:-39931145 | None:intergenic |
| CAAGGGGTAAATACTAGACG+TGG | 0.633754 | 2_2:-39931129 | None:intergenic |
| GCAAAGAACAAATATGCATG+AGG | 0.634864 | 2_2:-39931948 | None:intergenic |
| CTACTGATAATTACACATTG+AGG | 0.636083 | 2_2:+39930693 | Msa0250870:CDS |
| GGGAAAGAAACTTCCAACAA+TGG | 0.637787 | 2_2:-39928976 | None:intergenic |
| TTTGCATTGGCTTTACCAAG+AGG | 0.642280 | 2_2:+39930720 | Msa0250870:CDS |
| TACCCTGAGTACGAGACACG+AGG | 0.648373 | 2_2:-39929274 | None:intergenic |
| ATGTTGGCACAAAGGTAGAG+AGG | 0.654238 | 2_2:+39931646 | Msa0250870:CDS |
| CTGAAAATCAGATATGCATG+TGG | 0.659926 | 2_2:+39931823 | Msa0250870:three_prime_UTR |
| ATTTCACAACTGACAAACTG+AGG | 0.681977 | 2_2:+39930618 | Msa0250870:CDS |
| ACGCAAAACCAAAAGACTTG+GGG | 0.688719 | 2_2:-39931896 | None:intergenic |
| ACCCTGAGTACGAGACACGA+GGG | 0.700568 | 2_2:-39929273 | None:intergenic |
| AGTAGTCTTGACATCCACAT+GGG | 0.706350 | 2_2:-39930675 | None:intergenic |
| AGAACAAGCGGATCTCTAAG+GGG | 0.721950 | 2_2:+39929059 | Msa0250870:CDS |
| GGTTCATGGAGATTACTCTG+AGG | 0.741731 | 2_2:+39931623 | Msa0250870:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTATAAAAATTGTTTTA+TGG | - | chr2_2:39929837-39929856 | None:intergenic | 10.0% |
| !!! | GATTTTTTTTTTTTATTTAC+AGG | + | chr2_2:39930589-39930608 | Msa0250870:intron | 10.0% |
| !!! | TTTTTTTTTTTTATTTACAG+GGG | + | chr2_2:39930591-39930610 | Msa0250870:intron | 10.0% |
| !! | GATATTATGAAAATAAATAT+TGG | - | chr2_2:39931268-39931287 | None:intergenic | 10.0% |
| !! | GTAAAAAATGAAAATTTGAA+TGG | - | chr2_2:39929133-39929152 | None:intergenic | 15.0% |
| !!! | ATATATATCTGAATTTTGTT+TGG | + | chr2_2:39931796-39931815 | Msa0250870:three_prime_UTR | 15.0% |
| !!! | TTTGAATGGATTTTGAAAAA+GGG | - | chr2_2:39929119-39929138 | None:intergenic | 20.0% |
| !!! | ATTTGAATGGATTTTGAAAA+AGG | - | chr2_2:39929120-39929139 | None:intergenic | 20.0% |
| !! | ATATTCAATGAAAGTAAGAT+AGG | - | chr2_2:39929384-39929403 | None:intergenic | 20.0% |
| !! | AAAAAAATGTTGTCAAATAG+CGG | - | chr2_2:39929799-39929818 | None:intergenic | 20.0% |
| !!! | TCTTGTCTTTTAAATAATGT+TGG | - | chr2_2:39930039-39930058 | None:intergenic | 20.0% |
| !! | CTTAATGCTTATTTAGAAAA+TGG | + | chr2_2:39930341-39930360 | Msa0250870:intron | 20.0% |
| !!! | AAAATCTTTTGACAAATTTC+TGG | + | chr2_2:39930495-39930514 | Msa0250870:CDS | 20.0% |
| !!! | AAATCTTTTGACAAATTTCT+GGG | + | chr2_2:39930496-39930515 | Msa0250870:CDS | 20.0% |
| !! | ATATATAAAGAAGAAATCAC+TGG | + | chr2_2:39930918-39930937 | Msa0250870:intron | 20.0% |
| !!! | CATATTAGTTTGTTCAAATT+CGG | + | chr2_2:39931986-39932005 | Msa0250870:three_prime_UTR | 20.0% |
| !!! | ATTCTTATTTTGCAATTTGA+CGG | - | chr2_2:39932032-39932051 | None:intergenic | 20.0% |
| !! | TTTCCTTGCATTTTCTATAA+TGG | + | chr2_2:39929156-39929175 | Msa0250870:intron | 25.0% |
| ! | AAACCATTATAGAAAATGCA+AGG | - | chr2_2:39929162-39929181 | None:intergenic | 25.0% |
| ! | AATTACAAAAAACATGACAG+AGG | - | chr2_2:39929315-39929334 | None:intergenic | 25.0% |
| !!! | CTGTCATGTTTTTTGTAATT+TGG | + | chr2_2:39929315-39929334 | Msa0250870:intron | 25.0% |
| ! | ACTTTCATTGAATATCTATC+TGG | + | chr2_2:39929389-39929408 | Msa0250870:intron | 25.0% |
| ! | TTAAGCTATCTAAACAATCA+GGG | - | chr2_2:39929420-39929439 | None:intergenic | 25.0% |
| ! | ATTAAGCTATCTAAACAATC+AGG | - | chr2_2:39929421-39929440 | None:intergenic | 25.0% |
| !! | AAGCTAAAAGTTTTTCCTAT+AGG | + | chr2_2:39929514-39929533 | Msa0250870:intron | 25.0% |
| ! | TTATTTCCATAATAGCCTAT+AGG | - | chr2_2:39929532-39929551 | None:intergenic | 25.0% |
| ! | AAACATAAGTAACTAAGTGA+CGG | - | chr2_2:39929610-39929629 | None:intergenic | 25.0% |
| ! | GTTACTTATGTTTGTAGATA+CGG | + | chr2_2:39929617-39929636 | Msa0250870:intron | 25.0% |
| ! | AAAAAATGTTGTCAAATAGC+GGG | - | chr2_2:39929798-39929817 | None:intergenic | 25.0% |
| !! | TTATACTAAAAAGCATATCG+TGG | + | chr2_2:39929848-39929867 | Msa0250870:intron | 25.0% |
| !!! | TGATTGTTGTTTTATAAGTG+TGG | - | chr2_2:39929967-39929986 | None:intergenic | 25.0% |
| ! | GAGAATAAAAATGAAGACAT+GGG | - | chr2_2:39930142-39930161 | None:intergenic | 25.0% |
| !! | AAATATGTCTTAGTCTTTCA+TGG | + | chr2_2:39930283-39930302 | Msa0250870:intron | 25.0% |
| !! | AATATGTCTTAGTCTTTCAT+GGG | + | chr2_2:39930284-39930303 | Msa0250870:intron | 25.0% |
| ! | ATTATGACAAATAGATGGTT+CGG | - | chr2_2:39930534-39930553 | None:intergenic | 25.0% |
| ! | ACAACATTATGACAAATAGA+TGG | - | chr2_2:39930539-39930558 | None:intergenic | 25.0% |
| !! | TTTGTCATAATGTTGTTTGT+TGG | + | chr2_2:39930543-39930562 | Msa0250870:intron | 25.0% |
| ! | ATATATTAGTGTATCCAACA+CGG | + | chr2_2:39930847-39930866 | Msa0250870:intron | 25.0% |
| ! | AACAGCATTTCATAAAAGAA+AGG | - | chr2_2:39930898-39930917 | None:intergenic | 25.0% |
| !! | AATTTTCCAAGATCAAACTT+GGG | - | chr2_2:39931194-39931213 | None:intergenic | 25.0% |
| ! | TATCACCTGAATAAAAACTT+TGG | + | chr2_2:39931284-39931303 | Msa0250870:intron | 25.0% |
| !! | AACAACCAAAGTTTTTATTC+AGG | - | chr2_2:39931292-39931311 | None:intergenic | 25.0% |
| !! | AAAAACTTTGGTTGTTACTT+TGG | + | chr2_2:39931296-39931315 | Msa0250870:intron | 25.0% |
| !! | TTTGGAAAGTTTGAAGTAAT+TGG | - | chr2_2:39931365-39931384 | None:intergenic | 25.0% |
| ! | AATAATCTGAAGGTTGTTTA+TGG | - | chr2_2:39931407-39931426 | None:intergenic | 25.0% |
| ! | TTGAACTTGTAATAATCTGA+AGG | - | chr2_2:39931417-39931436 | None:intergenic | 25.0% |
| ! | ACTTATAACCATCTAAAAAG+TGG | + | chr2_2:39931565-39931584 | Msa0250870:intron | 25.0% |
| !!! | GTATATTTTTCAGCAATGAA+TGG | - | chr2_2:39931922-39931941 | None:intergenic | 25.0% |
| !! | AATGGATTTTGAAAAAGGGT+TGG | - | chr2_2:39929115-39929134 | None:intergenic | 30.0% |
| AATATCATACCAATCCTTCT+TGG | - | chr2_2:39929213-39929232 | None:intergenic | 30.0% | |
| ! | GAAGGATTGGTATGATATTA+AGG | + | chr2_2:39929214-39929233 | Msa0250870:CDS | 30.0% |
| !! | GGTTTGATTTGTACATTGTT+AGG | + | chr2_2:39929336-39929355 | Msa0250870:intron | 30.0% |
| ! | GTTTTTCCTATAGGCTATTA+TGG | + | chr2_2:39929523-39929542 | Msa0250870:intron | 30.0% |
| TAAGCTGAAAAAACATCTCA+TGG | + | chr2_2:39929549-39929568 | Msa0250870:intron | 30.0% | |
| CGAGAATAAAAATGAAGACA+TGG | - | chr2_2:39930143-39930162 | None:intergenic | 30.0% | |
| ! | ATATGTCTTAGTCTTTCATG+GGG | + | chr2_2:39930285-39930304 | Msa0250870:intron | 30.0% |
| GTTGCTGAAATTTGATCAAT+TGG | + | chr2_2:39930307-39930326 | Msa0250870:intron | 30.0% | |
| CTACTGATAATTACACATTG+AGG | + | chr2_2:39930693-39930712 | Msa0250870:CDS | 30.0% | |
| !! | CTTTAAGGATCTTCACTTTT+CGG | - | chr2_2:39931169-39931188 | None:intergenic | 30.0% |
| ! | CAATTTTCCAAGATCAAACT+TGG | - | chr2_2:39931195-39931214 | None:intergenic | 30.0% |
| GTTTGATCTTGGAAAATTGA+TGG | + | chr2_2:39931196-39931215 | Msa0250870:CDS | 30.0% | |
| !! | TGTTTCTATTTTGTCCTTGT+AGG | + | chr2_2:39931602-39931621 | Msa0250870:intron | 30.0% |
| TCAAATATGCCAATCCAAAC+AGG | + | chr2_2:39929640-39929659 | Msa0250870:intron | 35.0% | |
| GTAGATCACATATCGCTATA+GGG | - | chr2_2:39929903-39929922 | None:intergenic | 35.0% | |
| AGATAGATATTTCGAGCAGA+GGG | - | chr2_2:39929925-39929944 | None:intergenic | 35.0% | |
| TAGATAGATATTTCGAGCAG+AGG | - | chr2_2:39929926-39929945 | None:intergenic | 35.0% | |
| TCGAAATATCTATCTAGCAC+TGG | + | chr2_2:39929930-39929949 | Msa0250870:intron | 35.0% | |
| CGAAATATCTATCTAGCACT+GGG | + | chr2_2:39929931-39929950 | Msa0250870:intron | 35.0% | |
| !! | AATAATGTTGGTCTTGCTTG+TGG | - | chr2_2:39930027-39930046 | None:intergenic | 35.0% |
| GACAAGAAAAAAGACTGAAC+TGG | + | chr2_2:39930052-39930071 | Msa0250870:intron | 35.0% | |
| TGAACTGGCATTATCATGAT+GGG | + | chr2_2:39930067-39930086 | Msa0250870:intron | 35.0% | |
| !!! | TTTTCTAAAGTATCGACTCC+AGG | + | chr2_2:39930104-39930123 | Msa0250870:intron | 35.0% |
| !! | TTTCTAAAGTATCGACTCCA+GGG | + | chr2_2:39930105-39930124 | Msa0250870:intron | 35.0% |
| ATTCTCATGTAAGTGGAAAG+AGG | - | chr2_2:39930182-39930201 | None:intergenic | 35.0% | |
| TCTTTCCACTTACATGAGAA+TGG | + | chr2_2:39930181-39930200 | Msa0250870:intron | 35.0% | |
| AACTTCCATTCTCATGTAAG+TGG | - | chr2_2:39930189-39930208 | None:intergenic | 35.0% | |
| !!! | GCTATTTAACCCATTGGTTT+TGG | + | chr2_2:39930246-39930265 | Msa0250870:intron | 35.0% |
| TCCTTGTAACCAAAACCAAT+GGG | - | chr2_2:39930258-39930277 | None:intergenic | 35.0% | |
| TTCCTTGTAACCAAAACCAA+TGG | - | chr2_2:39930259-39930278 | None:intergenic | 35.0% | |
| ! | TAGAGTGTTTGAGGTTTCAT+TGG | + | chr2_2:39930403-39930422 | Msa0250870:CDS | 35.0% |
| ! | TTTCATTGGCTGATCTTCAA+GGG | + | chr2_2:39930417-39930436 | Msa0250870:CDS | 35.0% |
| ATTTCACAACTGACAAACTG+AGG | + | chr2_2:39930618-39930637 | Msa0250870:CDS | 35.0% | |
| ! | ACATTGAGGATGTTTTGCAT+TGG | + | chr2_2:39930707-39930726 | Msa0250870:CDS | 35.0% |
| ACAATCTAGTCAGATTAGAC+AGG | + | chr2_2:39930775-39930794 | Msa0250870:CDS | 35.0% | |
| !! | ATCCAACACATGTTTTAGGT+AGG | + | chr2_2:39930871-39930890 | Msa0250870:intron | 35.0% |
| !!! | AAATCACTGGTTTTGAACCT+AGG | + | chr2_2:39930931-39930950 | Msa0250870:intron | 35.0% |
| CTACGGATCTGAACAAATAA+AGG | - | chr2_2:39931008-39931027 | None:intergenic | 35.0% | |
| ! | CTTTATTTGTTCAGATCCGT+AGG | + | chr2_2:39931006-39931025 | Msa0250870:intron | 35.0% |
| ATCCTGTGATTTGAAGGAAT+TGG | + | chr2_2:39931061-39931080 | Msa0250870:CDS | 35.0% | |
| AAATTCATTCCCGAGATGAT+TGG | + | chr2_2:39931089-39931108 | Msa0250870:CDS | 35.0% | |
| AATTCATTCCCGAGATGATT+GGG | + | chr2_2:39931090-39931109 | Msa0250870:CDS | 35.0% | |
| TGATCTTGGAAAATTGATGG+AGG | + | chr2_2:39931199-39931218 | Msa0250870:CDS | 35.0% | |
| ! | GAAATCGAATAGAGAGCTTT+TGG | - | chr2_2:39931383-39931402 | None:intergenic | 35.0% |
| ! | GTTTTCACACAAGCATTTAC+TGG | - | chr2_2:39931458-39931477 | None:intergenic | 35.0% |
| TCATGCTAAAAGAGAACAGA+AGG | - | chr2_2:39931522-39931541 | None:intergenic | 35.0% | |
| AACCATCTAAAAAGTGGCTT+TGG | + | chr2_2:39931571-39931590 | Msa0250870:intron | 35.0% | |
| !!! | AACCAAAGCCACTTTTTAGA+TGG | - | chr2_2:39931576-39931595 | None:intergenic | 35.0% |
| ! | ATTTTGTCCTTGTAGGTTCA+TGG | + | chr2_2:39931609-39931628 | Msa0250870:intron | 35.0% |
| GAAATTGTTGGAGCTTGATT+TGG | + | chr2_2:39931702-39931721 | Msa0250870:exon | 35.0% | |
| CTGAAAATCAGATATGCATG+TGG | + | chr2_2:39931823-39931842 | Msa0250870:three_prime_UTR | 35.0% | |
| GCAAAGAACAAATATGCATG+AGG | - | chr2_2:39931951-39931970 | None:intergenic | 35.0% | |
| GGGAAAGAAACTTCCAACAA+TGG | - | chr2_2:39928979-39928998 | None:intergenic | 40.0% | |
| AGAGTTCTCACAGCAACAAT+GGG | - | chr2_2:39928999-39929018 | None:intergenic | 40.0% | |
| TAAGAACAAGCGGATCTCTA+AGG | + | chr2_2:39929057-39929076 | Msa0250870:CDS | 40.0% | |
| AAGAACAAGCGGATCTCTAA+GGG | + | chr2_2:39929058-39929077 | Msa0250870:CDS | 40.0% | |
| ATCCATTTGCCAAGAAGGAT+TGG | + | chr2_2:39929201-39929220 | Msa0250870:CDS | 40.0% | |
| TACCAATCCTTCTTGGCAAA+TGG | - | chr2_2:39929206-39929225 | None:intergenic | 40.0% | |
| TTCTTCACCTGGAAAACTGA+AGG | - | chr2_2:39929242-39929261 | None:intergenic | 40.0% | |
| ! | GTTTTCCAGGTGAAGAATGT+CGG | + | chr2_2:39929245-39929264 | Msa0250870:CDS | 40.0% |
| GACAGAGGAAAACAATACCT+TGG | - | chr2_2:39929300-39929319 | None:intergenic | 40.0% | |
| GCTATCTAAACAATCAGGGA+GGG | - | chr2_2:39929416-39929435 | None:intergenic | 40.0% | |
| AGCTATCTAAACAATCAGGG+AGG | - | chr2_2:39929417-39929436 | None:intergenic | 40.0% | |
| !! | TTGTCAAATAGCGGGTAAAG+TGG | - | chr2_2:39929790-39929809 | None:intergenic | 40.0% |
| GGTAGATCACATATCGCTAT+AGG | - | chr2_2:39929904-39929923 | None:intergenic | 40.0% | |
| CTGAACTGGCATTATCATGA+TGG | + | chr2_2:39930066-39930085 | Msa0250870:intron | 40.0% | |
| !! | TTCTAAAGTATCGACTCCAG+GGG | + | chr2_2:39930106-39930125 | Msa0250870:intron | 40.0% |
| !! | CAATGGGTTAAATAGCAGCT+AGG | - | chr2_2:39930242-39930261 | None:intergenic | 40.0% |
| ! | CTAGCTGCTATTTAACCCAT+TGG | + | chr2_2:39930240-39930259 | Msa0250870:intron | 40.0% |
| !!! | ACCCATTGGTTTTGGTTACA+AGG | + | chr2_2:39930254-39930273 | Msa0250870:intron | 40.0% |
| GAATGACAGATTGCTTCAGA+TGG | + | chr2_2:39930371-39930390 | Msa0250870:intron | 40.0% | |
| ! | ACTCAAGCATAGAGTGTTTG+AGG | + | chr2_2:39930394-39930413 | Msa0250870:CDS | 40.0% |
| ! | GTTTCATTGGCTGATCTTCA+AGG | + | chr2_2:39930416-39930435 | Msa0250870:CDS | 40.0% |
| ! | TTCATTGGCTGATCTTCAAG+GGG | + | chr2_2:39930418-39930437 | Msa0250870:CDS | 40.0% |
| ACCATGCATTCAGGAAGATT+AGG | + | chr2_2:39930447-39930466 | Msa0250870:CDS | 40.0% | |
| ACCTAATCTTCCTGAATGCA+TGG | - | chr2_2:39930451-39930470 | None:intergenic | 40.0% | |
| AACTGACAAACTGAGGTCAT+TGG | + | chr2_2:39930625-39930644 | Msa0250870:CDS | 40.0% | |
| ! | AGTAGTCTTGACATCCACAT+GGG | - | chr2_2:39930678-39930697 | None:intergenic | 40.0% |
| !! | TTTGCATTGGCTTTACCAAG+AGG | + | chr2_2:39930720-39930739 | Msa0250870:CDS | 40.0% |
| CTGACTAGATTGTGCATAAC+AGG | - | chr2_2:39930768-39930787 | None:intergenic | 40.0% | |
| ! | CGGTATCCAACACATGTTTT+AGG | + | chr2_2:39930867-39930886 | Msa0250870:intron | 40.0% |
| GTCCTACCTAAAACATGTGT+TGG | - | chr2_2:39930876-39930895 | None:intergenic | 40.0% | |
| AGAAGACAAAGCATGATCCT+AGG | - | chr2_2:39930951-39930970 | None:intergenic | 40.0% | |
| TGATCTCAACCATCTTCCTA+CGG | - | chr2_2:39931025-39931044 | None:intergenic | 40.0% | |
| TCAAATCACAGGATGATGCT+TGG | - | chr2_2:39931055-39931074 | None:intergenic | 40.0% | |
| AGCATCATCCTGTGATTTGA+AGG | + | chr2_2:39931055-39931074 | Msa0250870:CDS | 40.0% | |
| GACCAATTCCTTCAAATCAC+AGG | - | chr2_2:39931066-39931085 | None:intergenic | 40.0% | |
| TCATCTCGGGAATGAATTTG+CGG | - | chr2_2:39931088-39931107 | None:intergenic | 40.0% | |
| AATCTCCTTCCCAATCATCT+CGG | - | chr2_2:39931102-39931121 | None:intergenic | 40.0% | |
| GATCAAACTTGGGAGCTTTA+AGG | - | chr2_2:39931184-39931203 | None:intergenic | 40.0% | |
| AAAGCTCCCAAGTTTGATCT+TGG | + | chr2_2:39931185-39931204 | Msa0250870:CDS | 40.0% | |
| !! | TTGGTTGTTACTTTGGTCAC+TGG | + | chr2_2:39931303-39931322 | Msa0250870:intron | 40.0% |
| GTAATCTCCATGAACCTACA+AGG | - | chr2_2:39931619-39931638 | None:intergenic | 40.0% | |
| GAGGAACCTACTGAAATTGT+TGG | + | chr2_2:39931690-39931709 | Msa0250870:CDS | 40.0% | |
| CAAGCTCCAACAATTTCAGT+AGG | - | chr2_2:39931699-39931718 | None:intergenic | 40.0% | |
| ACGCAAAACCAAAAGACTTG+GGG | - | chr2_2:39931899-39931918 | None:intergenic | 40.0% | |
| GACGCAAAACCAAAAGACTT+GGG | - | chr2_2:39931900-39931919 | None:intergenic | 40.0% | |
| ! | CCAACAATGGCACCGTTTTA+GGG | - | chr2_2:39928966-39928985 | None:intergenic | 45.0% |
| ! | TCCAACAATGGCACCGTTTT+AGG | - | chr2_2:39928967-39928986 | None:intergenic | 45.0% |
| CAGAGTTCTCACAGCAACAA+TGG | - | chr2_2:39929000-39929019 | None:intergenic | 45.0% | |
| GTTTCACTGTTTGCAGAGTG+CGG | - | chr2_2:39929025-39929044 | None:intergenic | 45.0% | |
| CTCTGCAAACAGTGAAACCA+TGG | + | chr2_2:39929027-39929046 | Msa0250870:exon | 45.0% | |
| GATCCGCTTGTTCTTACCAA+CGG | - | chr2_2:39929053-39929072 | None:intergenic | 45.0% | |
| AGAACAAGCGGATCTCTAAG+GGG | + | chr2_2:39929059-39929078 | Msa0250870:CDS | 45.0% | |
| ! | ATCTCTAAGGGGAAGAAAGG+TGG | + | chr2_2:39929070-39929089 | Msa0250870:CDS | 45.0% |
| TGCTGATCCATTTGCCAAGA+AGG | + | chr2_2:39929196-39929215 | Msa0250870:CDS | 45.0% | |
| ! | TAAGGCTCCTTCAGTTTTCC+AGG | + | chr2_2:39929232-39929251 | Msa0250870:CDS | 45.0% |
| CACGAAGTATACTCAGTCCA+AGG | - | chr2_2:39929667-39929686 | None:intergenic | 45.0% | |
| TCTTGCAGTGCAGAAAACAG+CGG | + | chr2_2:39929728-39929747 | Msa0250870:intron | 45.0% | |
| TTGCGAGCTGAAGATGTTCA+AGG | + | chr2_2:39930470-39930489 | Msa0250870:CDS | 45.0% | |
| TGCGAGCTGAAGATGTTCAA+GGG | + | chr2_2:39930471-39930490 | Msa0250870:CDS | 45.0% | |
| AACTCTTGTTGAAGCCCATG+TGG | + | chr2_2:39930661-39930680 | Msa0250870:CDS | 45.0% | |
| ! | CAGTAGTCTTGACATCCACA+TGG | - | chr2_2:39930679-39930698 | None:intergenic | 45.0% |
| ACATGTGTTGGATACCGTGT+TGG | - | chr2_2:39930864-39930883 | None:intergenic | 45.0% | |
| TGTTCAGATCCGTAGGAAGA+TGG | + | chr2_2:39931013-39931032 | Msa0250870:intron | 45.0% | |
| ATCTCCTTCCCAATCATCTC+GGG | - | chr2_2:39931101-39931120 | None:intergenic | 45.0% | |
| CAAGGGGTAAATACTAGACG+TGG | - | chr2_2:39931132-39931151 | None:intergenic | 45.0% | |
| GGATGAACACATTCTGCAAG+GGG | - | chr2_2:39931148-39931167 | None:intergenic | 45.0% | |
| CGGATGAACACATTCTGCAA+GGG | - | chr2_2:39931149-39931168 | None:intergenic | 45.0% | |
| TCGGATGAACACATTCTGCA+AGG | - | chr2_2:39931150-39931169 | None:intergenic | 45.0% | |
| GGTTCATGGAGATTACTCTG+AGG | + | chr2_2:39931623-39931642 | Msa0250870:intron | 45.0% | |
| ! | GGAGATTACTCTGAGGATGT+TGG | + | chr2_2:39931630-39931649 | Msa0250870:CDS | 45.0% |
| ATGTTGGCACAAAGGTAGAG+AGG | + | chr2_2:39931646-39931665 | Msa0250870:CDS | 45.0% | |
| TCCATCACCATTTCATCAGC+AGG | - | chr2_2:39931672-39931691 | None:intergenic | 45.0% | |
| !! | TGCTGATGAAATGGTGATGG+AGG | + | chr2_2:39931671-39931690 | Msa0250870:CDS | 45.0% |
| ! | GTTTCTCACCCCAAGTCTTT+TGG | + | chr2_2:39931888-39931907 | Msa0250870:three_prime_UTR | 45.0% |
| GGACGCAAAACCAAAAGACT+TGG | - | chr2_2:39931901-39931920 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTTTTTTATTTACA+GGG | + | chr2_2:39930590-39930609 | Msa0250870:intron | 5.0% |
| !! | ATATTATGAAAATAAATATT+GGG | - | chr2_2:39931267-39931286 | None:intergenic | 5.0% |
| !!! | AACAAAATTAAAATTTTAAA+AGG | - | chr2_2:39931497-39931516 | None:intergenic | 5.0% |
| !! | CCCTAAAACGGTGCCATTGT+TGG | + | chr2_2:39928963-39928982 | Msa0250870:five_prime_UTR | 50.0% |
| AACAGTGAAACCATGGCCGT+TGG | + | chr2_2:39929034-39929053 | Msa0250870:exon | 50.0% | |
| CTTGTTCTTACCAACGGCCA+TGG | - | chr2_2:39929047-39929066 | None:intergenic | 50.0% | |
| ! | TGGCCGTTGGTAAGAACAAG+CGG | + | chr2_2:39929047-39929066 | Msa0250870:CDS | 50.0% |
| ! | CGGATCTCTAAGGGGAAGAA+AGG | + | chr2_2:39929067-39929086 | Msa0250870:CDS | 50.0% |
| TCTTGCCGACATTCTTCACC+TGG | - | chr2_2:39929253-39929272 | None:intergenic | 50.0% | |
| TGCCAATCCAAACAGGTCCT+TGG | + | chr2_2:39929647-39929666 | Msa0250870:intron | 50.0% | |
| GTCCAAGGACCTGTTTGGAT+TGG | - | chr2_2:39929652-39929671 | None:intergenic | 50.0% | |
| ACTCAGTCCAAGGACCTGTT+TGG | - | chr2_2:39929657-39929676 | None:intergenic | 50.0% | |
| CTTGCAGTGCAGAAAACAGC+GGG | + | chr2_2:39929729-39929748 | Msa0250870:intron | 50.0% | |
| !! | TGTTGGTCTTGCTTGTGGCA+GGG | - | chr2_2:39930022-39930041 | None:intergenic | 50.0% |
| !! | ATGTTGGTCTTGCTTGTGGC+AGG | - | chr2_2:39930023-39930042 | None:intergenic | 50.0% |
| TGAGGTCATTGGTGCGTAAG+TGG | + | chr2_2:39930636-39930655 | Msa0250870:CDS | 50.0% | |
| TACCAAGAGGAGAGCTAACC+AGG | + | chr2_2:39930733-39930752 | Msa0250870:CDS | 50.0% | |
| CATAACAGGTCCTCTTCACC+TGG | - | chr2_2:39930754-39930773 | None:intergenic | 50.0% | |
| CATTCCCGAGATGATTGGGA+AGG | + | chr2_2:39931094-39931113 | Msa0250870:CDS | 50.0% | |
| ! | CTCTGAGGATGTTGGCACAA+AGG | + | chr2_2:39931638-39931657 | Msa0250870:CDS | 50.0% |
| AGAGAGGCCTGCTGATGAAA+TGG | + | chr2_2:39931662-39931681 | Msa0250870:CDS | 50.0% | |
| GCCTGCTGATGAAATGGTGA+TGG | + | chr2_2:39931668-39931687 | Msa0250870:CDS | 50.0% | |
| ACCCTCGTGTCTCGTACTCA+GGG | + | chr2_2:39929272-39929291 | Msa0250870:CDS | 55.0% | |
| ACCCTGAGTACGAGACACGA+GGG | - | chr2_2:39929276-39929295 | None:intergenic | 55.0% | |
| TACCCTGAGTACGAGACACG+AGG | - | chr2_2:39929277-39929296 | None:intergenic | 55.0% | |
| ! | GTCTCGTACTCAGGGTACCA+AGG | + | chr2_2:39929280-39929299 | Msa0250870:CDS | 55.0% |
| CATGGGAATGTCATGTCCCC+TGG | - | chr2_2:39930125-39930144 | None:intergenic | 55.0% | |
| GGGACGAAGACCATGCATTC+AGG | + | chr2_2:39930438-39930457 | Msa0250870:CDS | 55.0% | |
| ! | CACCTGGTTAGCTCTCCTCT+TGG | - | chr2_2:39930738-39930757 | None:intergenic | 55.0% |
| GGAGAGCTAACCAGGTGAAG+AGG | + | chr2_2:39930741-39930760 | Msa0250870:CDS | 55.0% | |
| GACCCTCGTGTCTCGTACTC+AGG | + | chr2_2:39929271-39929290 | Msa0250870:CDS | 60.0% | |
| CTTGTGGCAGGGCAGAAGTG+GGG | - | chr2_2:39930011-39930030 | None:intergenic | 60.0% | |
| GCTTGTGGCAGGGCAGAAGT+GGG | - | chr2_2:39930012-39930031 | None:intergenic | 60.0% | |
| TGCTTGTGGCAGGGCAGAAG+TGG | - | chr2_2:39930013-39930032 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 39928958 | 39932065 | 39928958 | ID=Msa0250870;Name=Msa0250870 |
| chr2_2 | mRNA | 39928958 | 39932065 | 39928958 | ID=Msa0250870-mRNA-1;Parent=Msa0250870;Name=Msa0250870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=67|1|1|1|0.83|0.71|7|346|261 |
| chr2_2 | exon | 39928958 | 39928984 | 39928958 | ID=Msa0250870-mRNA-1:exon:12341;Parent=Msa0250870-mRNA-1 |
| chr2_2 | exon | 39929006 | 39929104 | 39929006 | ID=Msa0250870-mRNA-1:exon:12342;Parent=Msa0250870-mRNA-1 |
| chr2_2 | exon | 39929196 | 39929301 | 39929196 | ID=Msa0250870-mRNA-1:exon:12343;Parent=Msa0250870-mRNA-1 |
| chr2_2 | exon | 39930380 | 39930517 | 39930380 | ID=Msa0250870-mRNA-1:exon:12344;Parent=Msa0250870-mRNA-1 |
| chr2_2 | exon | 39930611 | 39930796 | 39930611 | ID=Msa0250870-mRNA-1:exon:12345;Parent=Msa0250870-mRNA-1 |
| chr2_2 | exon | 39931020 | 39931220 | 39931020 | ID=Msa0250870-mRNA-1:exon:12346;Parent=Msa0250870-mRNA-1 |
| chr2_2 | exon | 39931624 | 39932065 | 39931624 | ID=Msa0250870-mRNA-1:exon:12347;Parent=Msa0250870-mRNA-1 |
| chr2_2 | five_prime_UTR | 39928958 | 39928984 | 39928958 | ID=Msa0250870-mRNA-1:five_prime_utr;Parent=Msa0250870-mRNA-1 |
| chr2_2 | five_prime_UTR | 39929006 | 39929045 | 39929006 | ID=Msa0250870-mRNA-1:five_prime_utr;Parent=Msa0250870-mRNA-1 |
| chr2_2 | CDS | 39929046 | 39929104 | 39929046 | ID=Msa0250870-mRNA-1:cds;Parent=Msa0250870-mRNA-1 |
| chr2_2 | CDS | 39929196 | 39929301 | 39929196 | ID=Msa0250870-mRNA-1:cds;Parent=Msa0250870-mRNA-1 |
| chr2_2 | CDS | 39930380 | 39930517 | 39930380 | ID=Msa0250870-mRNA-1:cds;Parent=Msa0250870-mRNA-1 |
| chr2_2 | CDS | 39930611 | 39930796 | 39930611 | ID=Msa0250870-mRNA-1:cds;Parent=Msa0250870-mRNA-1 |
| chr2_2 | CDS | 39931020 | 39931220 | 39931020 | ID=Msa0250870-mRNA-1:cds;Parent=Msa0250870-mRNA-1 |
| chr2_2 | CDS | 39931624 | 39931719 | 39931624 | ID=Msa0250870-mRNA-1:cds;Parent=Msa0250870-mRNA-1 |
| chr2_2 | three_prime_UTR | 39931720 | 39932065 | 39931720 | ID=Msa0250870-mRNA-1:three_prime_utr;Parent=Msa0250870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
