AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0304000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304000 MtrunA17_Chr2g0331251 96.583 556 15 2 2 555 1 554 0.0 1118
Msa0304000 MtrunA17_Chr8g0357041 49.398 498 246 4 60 553 3 498 1.61e-168 490
Msa0304000 MtrunA17_Chr8g0390401 51.408 426 207 0 141 566 263 688 6.75e-162 479
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304000 AT2G32230.2 57.401 554 223 4 14 554 17 570 0.0 602
Msa0304000 AT2G32230.1 57.401 554 223 4 14 554 17 570 0.0 602
Msa0304000 AT4G21900.1 48.017 479 232 7 90 552 96 573 2.14e-152 450
Msa0304000 AT2G16650.1 45.419 513 257 8 56 552 9 514 7.53e-142 421
Msa0304000 AT2G16650.2 47.356 416 203 6 152 552 1 415 8.36e-121 363
Msa0304000 AT5G60430.3 47.368 114 51 2 294 398 2 115 2.79e-18 82.4
Msa0304000 AT5G60430.1 47.368 114 51 2 294 398 2 115 2.79e-18 82.4
Msa0304000 AT5G60430.4 47.368 114 51 2 294 398 2 115 2.79e-18 82.4
Msa0304000 AT5G60430.2 47.368 114 51 2 294 398 2 115 2.79e-18 82.4

Find 205 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTTGTTATTTGGATTC+TGG 0.133755 2_3:-61311136 None:intergenic
CTTCGCCCCGCACTTTAATT+TGG 0.135424 2_3:-61309134 None:intergenic
GGACCACTTGTTCCAACTTC+TGG 0.152171 2_3:+61311490 Msa0304000:CDS
TCTATAAGTCTCTTGTTATT+TGG 0.154869 2_3:-61311143 None:intergenic
TGCTGCCTCGTTGTCTAAAT+TGG 0.177237 2_3:+61310614 Msa0304000:CDS
TTCATGAATTGATAAAATTT+TGG 0.189339 2_3:-61309540 None:intergenic
TGTTAGGAATGATTATTATT+AGG 0.198211 2_3:+61313553 Msa0304000:three_prime_UTR
GGATGAGCTTTGTGCGCTTT+TGG 0.238656 2_3:+61310260 Msa0304000:CDS
TCAAACTTACGAAGAATTAA+TGG 0.250827 2_3:+61313750 Msa0304000:three_prime_UTR
TGGTTGATTGAGTGTTATTT+TGG 0.264449 2_3:-61309735 None:intergenic
ACAAGAGACTTATAGAAAAT+TGG 0.268817 2_3:+61311150 Msa0304000:CDS
GTTAGGAATGATTATTATTA+GGG 0.280138 2_3:+61313554 Msa0304000:three_prime_UTR
CCGTTTGATGCTGTTGTTGA+TGG 0.284303 2_3:+61310897 Msa0304000:CDS
TACCTTTGTACTGTTCAAAA+TGG 0.298977 2_3:+61309943 Msa0304000:CDS
CATTTAATAATTGAAAAGTA+TGG 0.300287 2_3:+61313682 Msa0304000:three_prime_UTR
GCTTTGGTTGAAAGCTTGAT+TGG 0.301913 2_3:-61309763 None:intergenic
TCGTTACTCACTAGTTATTC+AGG 0.304371 2_3:+61312562 Msa0304000:CDS
TCTCTTGTTATTTGGATTCT+GGG 0.316392 2_3:-61311135 None:intergenic
GACCACTTGTTCCAACTTCT+GGG 0.330944 2_3:+61311491 Msa0304000:CDS
TTGCATGTTAATCGAGTAAC+TGG 0.333611 2_3:+61311104 Msa0304000:CDS
TTCGCCCCGCACTTTAATTT+GGG 0.338349 2_3:-61309133 None:intergenic
GCGCCAAAGTTGAGGTCTTA+TGG 0.345312 2_3:+61310144 Msa0304000:CDS
ATGAGATATTGCATCGGTTA+AGG 0.358930 2_3:+61310319 Msa0304000:CDS
GTATGAATCAGCGGCCTAGA+AGG 0.362724 2_3:+61313301 Msa0304000:three_prime_UTR
AAAATATGCACTCAAGTGTT+AGG 0.367096 2_3:+61313537 Msa0304000:three_prime_UTR
GAAGGGTTTGTGAGGGGAGG+TGG 0.371228 2_3:+61310453 Msa0304000:CDS
AACAGACTAATAATTTAAAT+AGG 0.378822 2_3:-61313600 None:intergenic
GGTGGTGGATGGCATGGTCA+AGG 0.379418 2_3:+61310471 Msa0304000:CDS
ACTAATCATTTCATTTGATC+GGG 0.379589 2_3:+61313650 Msa0304000:three_prime_UTR
AGACTGAAGCAGTAACAAAT+TGG 0.380478 2_3:-61313433 None:intergenic
AGCCATTTCCTTGGGATGTC+AGG 0.384390 2_3:-61312885 None:intergenic
TGAAAGCTTGATTGGGTTAG+TGG 0.389288 2_3:-61309755 None:intergenic
TGCTGAATTCAGCTTTAAAC+AGG 0.393135 2_3:+61310944 Msa0304000:CDS
AAAGAATTGGAAGAGAGAAA+TGG 0.393485 2_3:-61309634 None:intergenic
TCTTATGGTCCGGCTTTGTA+TGG 0.393870 2_3:+61310159 Msa0304000:CDS
TCGGAATATGCGATGAAGAT+TGG 0.397404 2_3:+61310399 Msa0304000:CDS
CTGCACACAACTGCGATTCC+AGG 0.400256 2_3:-61313044 None:intergenic
CGGAATATGCGATGAAGATT+GGG 0.405748 2_3:+61310400 Msa0304000:CDS
TTAGTAAACGTCGCTTCATT+CGG 0.407113 2_3:-61310042 None:intergenic
ATAAGTGGCAATCTCTTTGA+AGG 0.415790 2_3:-61311077 None:intergenic
CTATCGATAGATAGATAGTA+TGG 0.422139 2_3:-61309409 None:intergenic
TGAGATATTGCATCGGTTAA+GGG 0.423689 2_3:+61310320 Msa0304000:CDS
TTGTGAGGGGAGGTGGTGGA+TGG 0.424919 2_3:+61310460 Msa0304000:CDS
AGGGGAGGTGGTGGATGGCA+TGG 0.427807 2_3:+61310465 Msa0304000:CDS
TTAAACAATGGAGGTTATGA+AGG 0.429505 2_3:-61313457 None:intergenic
AAGAATTGGAAGAGAGAAAT+GGG 0.431572 2_3:-61309633 None:intergenic
CTTTGGTTGAAAGCTTGATT+GGG 0.432185 2_3:-61309762 None:intergenic
ACACGGGGAAGTTGGGAACT+TGG 0.432942 2_3:+61309360 Msa0304000:five_prime_UTR
GTGTTTGAGAGAGAAAGAAT+TGG 0.435587 2_3:-61309647 None:intergenic
AATAAAACCACCATGAAAAC+AGG 0.435664 2_3:-61313706 None:intergenic
TGAAGATTGGGAAGAGGGAG+TGG 0.436376 2_3:+61310412 Msa0304000:CDS
GGGTTTGTGAGGGGAGGTGG+TGG 0.436700 2_3:+61310456 Msa0304000:CDS
GTCAAGGGTGGCTTGGAAGC+GGG 0.439429 2_3:+61310487 Msa0304000:CDS
TTGTTATTTGGATTCTGGGC+AGG 0.440934 2_3:-61311131 None:intergenic
GACTAATCATTTCATTTGAT+CGG 0.445869 2_3:+61313649 Msa0304000:three_prime_UTR
ATTGACAACACGGGGAAGTT+GGG 0.447841 2_3:+61309353 Msa0304000:five_prime_UTR
TGGCATGGTCAAGGGTGGCT+TGG 0.448054 2_3:+61310480 Msa0304000:CDS
TATGATTGAGTCGGGTGTTA+TGG 0.449131 2_3:+61310230 Msa0304000:CDS
TCACAATCTAACTTCAACTT+AGG 0.450508 2_3:-61309325 None:intergenic
GGCAACATGGTTTAATTGAC+GGG 0.452096 2_3:-61309061 None:intergenic
ATCGGTTAAGGGCTGTGGTT+AGG 0.456727 2_3:+61310331 Msa0304000:CDS
TATTATAATGATCAAGATTG+AGG 0.457429 2_3:-61309912 None:intergenic
CCATCAACAACAGCATCAAA+CGG 0.459647 2_3:-61310897 None:intergenic
ATCCTGACATCCCAAGGAAA+TGG 0.460436 2_3:+61312883 Msa0304000:CDS
AACAACTCAAAAGCCATCTC+AGG 0.464122 2_3:-61310096 None:intergenic
CTTTGAAGGTTATTGAGGAT+TGG 0.464466 2_3:+61310370 Msa0304000:CDS
TGAGATTAGCGCAGGATTGA+AGG 0.465378 2_3:+61309275 Msa0304000:five_prime_UTR
TGCGATGAAGATTGGGAAGA+GGG 0.465382 2_3:+61310407 Msa0304000:CDS
CATGCATGATGCTCAGCAAA+TGG 0.465431 2_3:-61313627 None:intergenic
GTGGTGGATGGCATGGTCAA+GGG 0.466933 2_3:+61310472 Msa0304000:CDS
TTACTGTAGAAGAGGAGAAA+TGG 0.468015 2_3:-61309082 None:intergenic
GATTGACAACACGGGGAAGT+TGG 0.468757 2_3:+61309352 Msa0304000:five_prime_UTR
CAGAAGTGGCTTGAAAAGAA+TGG 0.472505 2_3:+61310873 Msa0304000:intron
GGTGTCTGAGTCGACTTTGA+AGG 0.473114 2_3:+61310356 Msa0304000:CDS
AACCGTTGGATTAATCCAAC+AGG 0.479710 2_3:-61309253 None:intergenic
GTTCTTTATGCTACTCCCCA+TGG 0.482926 2_3:+61311185 Msa0304000:CDS
GATAAGAGAAGGGTTTGTGA+GGG 0.483695 2_3:+61310446 Msa0304000:CDS
GGTCAAGGGTGGCTTGGAAG+CGG 0.485121 2_3:+61310486 Msa0304000:CDS
AAAGTTGAGGTCTTATGGTC+CGG 0.488092 2_3:+61310149 Msa0304000:CDS
AAAGCTGAATTCAGCAATGT+TGG 0.488932 2_3:-61310937 None:intergenic
GTGACACATAGCCATTTCCT+TGG 0.489934 2_3:-61312894 None:intergenic
CATTTCATTTGATCGGGGCG+TGG 0.491872 2_3:+61313656 Msa0304000:three_prime_UTR
GTCGACTTTGAAGGTTATTG+AGG 0.493671 2_3:+61310365 Msa0304000:CDS
TGGCAACATGGTTTAATTGA+CGG 0.494697 2_3:-61309062 None:intergenic
ATGCGATGAAGATTGGGAAG+AGG 0.497007 2_3:+61310406 Msa0304000:CDS
AGTAACGAGGAGGTAGAACT+AGG 0.498037 2_3:-61312547 None:intergenic
ATTATAATGATCAAGATTGA+GGG 0.499039 2_3:-61309911 None:intergenic
AAAATCCCAAATTAAAGTGC+GGG 0.499378 2_3:+61309128 Msa0304000:five_prime_UTR
GGTGGCTTGGAAGCGGGCAA+TGG 0.500253 2_3:+61310493 Msa0304000:CDS
CATCAACAACAGCATCAAAC+GGG 0.500421 2_3:-61310896 None:intergenic
ATGAATCAGCGGCCTAGAAG+GGG 0.502746 2_3:+61313303 Msa0304000:three_prime_UTR
TCCGCGTGTGTTGGCACTTG+AGG 0.504349 2_3:+61312960 Msa0304000:CDS
GGACCATAAGACCTCAACTT+TGG 0.505724 2_3:-61310147 None:intergenic
GAAGAGGGAGTGGGATGATG+AGG 0.506685 2_3:+61310422 Msa0304000:CDS
CCAATCGTCATTTGAACCAT+GGG 0.506713 2_3:-61311201 None:intergenic
GTTAAGGGCTGTGGTTAGGC+AGG 0.507174 2_3:+61310335 Msa0304000:CDS
TGGCACATGCCAACTTCCAT+TGG 0.507835 2_3:-61312844 None:intergenic
TGACACATAGCCATTTCCTT+GGG 0.508151 2_3:-61312893 None:intergenic
AGAGCGATTGATTGCATGAT+CGG 0.511389 2_3:+61313398 Msa0304000:three_prime_UTR
ATACTATCTATCTATCGATA+GGG 0.512927 2_3:+61309411 Msa0304000:five_prime_UTR
CCCATGGTTCAAATGACGAT+TGG 0.513081 2_3:+61311201 Msa0304000:CDS
GTCGGGTGTTATGGCGGAGG+AGG 0.513862 2_3:+61310239 Msa0304000:CDS
TGGAAGAGAGAAATGGGCGA+TGG 0.514014 2_3:-61309627 None:intergenic
AAATGATTGAAGTTTGCCTT+GGG 0.514089 2_3:-61310651 None:intergenic
AAAATGATTGAAGTTTGCCT+TGG 0.515005 2_3:-61310652 None:intergenic
GTGGATGGCATGGTCAAGGG+TGG 0.516675 2_3:+61310475 Msa0304000:CDS
GATGATGATATGATTGAGTC+GGG 0.517088 2_3:+61310222 Msa0304000:CDS
GGTGAGTTTGGCCATTGAAA+CGG 0.517685 2_3:-61309584 None:intergenic
TATTGAGGATTGGTTTGAGT+CGG 0.518230 2_3:+61310380 Msa0304000:CDS
ATTGCATCGGTTAAGGGCTG+TGG 0.519630 2_3:+61310326 Msa0304000:CDS
TTAACATGCAAAATTATAAG+TGG 0.523620 2_3:-61311092 None:intergenic
GGATGCTAAGAAAGCTTATG+AGG 0.524829 2_3:+61310197 Msa0304000:CDS
TGCTAGGTTAGCTGCTGCTA+AGG 0.526357 2_3:+61310068 Msa0304000:CDS
ATGATGAGGAGATAAGAGAA+GGG 0.527043 2_3:+61310436 Msa0304000:CDS
GCTTGGAAGCGGGCAATGGA+AGG 0.527190 2_3:+61310497 Msa0304000:CDS
TATGAATCAGCGGCCTAGAA+GGG 0.528994 2_3:+61313302 Msa0304000:three_prime_UTR
GGGGCGAAGCTTGGTGAAGA+TGG 0.530994 2_3:+61309148 Msa0304000:five_prime_UTR
TTAAAGTGCGGGGCGAAGCT+TGG 0.531467 2_3:+61309139 Msa0304000:five_prime_UTR
TGGAGTATTTCAAACTTCAC+AGG 0.535214 2_3:-61313813 None:intergenic
AAGTGCTTGAAGAACATCAC+TGG 0.537491 2_3:-61309854 None:intergenic
AGATAAGAGAAGGGTTTGTG+AGG 0.538180 2_3:+61310445 Msa0304000:CDS
CATACTATCTATCTATCGAT+AGG 0.539576 2_3:+61309410 Msa0304000:five_prime_UTR
AGCCCAGAAGTTGGAACAAG+TGG 0.539734 2_3:-61311493 None:intergenic
AGTGTTGGTGGTGGTAGTGA+AGG 0.541160 2_3:-61309692 None:intergenic
TTGAAGCAGATGAAGAGAGT+AGG 0.542479 2_3:+61310117 Msa0304000:CDS
AGAGAAGGGTTTGTGAGGGG+AGG 0.542825 2_3:+61310450 Msa0304000:CDS
GCTGCGTGGAACCGTTTCAA+TGG 0.544560 2_3:+61309573 Msa0304000:CDS
TTTCATTTGGGTCTTCAAAG+AGG 0.545277 2_3:+61309979 Msa0304000:CDS
CGCAGGATTGAAGGCAGGAG+AGG 0.547998 2_3:+61309284 Msa0304000:five_prime_UTR
ATAAGAGAAGGGTTTGTGAG+GGG 0.548191 2_3:+61310447 Msa0304000:CDS
AAGACGAATGTTGATGAGGA+TGG 0.548610 2_3:+61310525 Msa0304000:CDS
GGAAGAGAGAAATGGGCGAT+GGG 0.551401 2_3:-61309626 None:intergenic
AGCCTGTTGGATTAATCCAA+CGG 0.552072 2_3:+61309251 Msa0304000:five_prime_UTR
TGATTATTATTAGGGTGCCA+TGG 0.552193 2_3:+61313562 Msa0304000:three_prime_UTR
TTTGACAAATGATGAGATGA+GGG 0.554718 2_3:+61311469 Msa0304000:CDS
ACCAATCGTCATTTGAACCA+TGG 0.558571 2_3:-61311202 None:intergenic
GTTGTTGATGGTGCAAATGT+AGG 0.559189 2_3:+61310909 Msa0304000:CDS
CCAACGGTTGAGATTAGCGC+AGG 0.560335 2_3:+61309267 Msa0304000:five_prime_UTR
AGGAATCAGCCAATGGAAGT+TGG 0.560803 2_3:+61312835 Msa0304000:intron
TTTGTTTCTTAATTAAACAA+TGG 0.560814 2_3:-61313469 None:intergenic
GAAGATTGGGAAGAGGGAGT+GGG 0.563676 2_3:+61310413 Msa0304000:CDS
GTTTCTTAATTAAACAATGG+AGG 0.563882 2_3:-61313466 None:intergenic
CGAAAGAACCTCGGGTCAAG+TGG 0.563934 2_3:+61313360 Msa0304000:three_prime_UTR
ATTAGCGCAGGATTGAAGGC+AGG 0.565634 2_3:+61309279 Msa0304000:five_prime_UTR
GTTGGCACTTGAGGAGAAAG+AGG 0.566206 2_3:+61312969 Msa0304000:exon
GATGATGAGGAGATAAGAGA+AGG 0.567606 2_3:+61310435 Msa0304000:CDS
CGACGTTTACTAATGCTGCT+AGG 0.568299 2_3:+61310052 Msa0304000:CDS
TGTTTGAGATAAAGTGTTGG+TGG 0.570473 2_3:-61309704 None:intergenic
AGTAACAAATTGGACTCAGC+GGG 0.570808 2_3:-61313423 None:intergenic
TAGGTTAGCTGCTGCTAAGG+AGG 0.576374 2_3:+61310071 Msa0304000:CDS
TAGGAATTGCGCCAAAGTTG+AGG 0.576806 2_3:+61310136 Msa0304000:CDS
TGTACTGTTCAAAATGGTGA+TGG 0.578769 2_3:+61309949 Msa0304000:CDS
CCTGCGCTAATCTCAACCGT+TGG 0.579606 2_3:-61309267 None:intergenic
TGATGATGATATGATTGAGT+CGG 0.580686 2_3:+61310221 Msa0304000:CDS
AAACAAAGAGAGACAGAGAG+AGG 0.580695 2_3:-61309506 None:intergenic
ACATCAACCTCCGCGTGTGT+TGG 0.581274 2_3:+61312951 Msa0304000:CDS
TTGAGATAAAGTGTTGGTGG+TGG 0.581597 2_3:-61309701 None:intergenic
GAGAGGATCCGTATGATATG+AGG 0.582721 2_3:+61309301 Msa0304000:five_prime_UTR
ACTTAGGACCTCATATCATA+CGG 0.586965 2_3:-61309309 None:intergenic
CGATAGATAGATAGTATGGT+AGG 0.587529 2_3:-61309405 None:intergenic
TGAGTCGGGTGTTATGGCGG+AGG 0.588423 2_3:+61310236 Msa0304000:CDS
TAAGTGGCAATCTCTTTGAA+GGG 0.596304 2_3:-61311076 None:intergenic
CGAGTATCAGTCTCAACTCG+TGG 0.596651 2_3:+61312518 Msa0304000:CDS
TGAGGTGAAGAATGAAGATA+AGG 0.597862 2_3:+61310293 Msa0304000:CDS
GTGCAGCTGCGATATTTGCT+AGG 0.598565 2_3:+61313061 Msa0304000:three_prime_UTR
GGATCATCGCTAGCTACAGT+TGG 0.598712 2_3:-61312864 None:intergenic
TGCTAAGGAGGATCCTGAGA+TGG 0.602179 2_3:+61310083 Msa0304000:CDS
CTAATCATTTCATTTGATCG+GGG 0.608049 2_3:+61313651 Msa0304000:three_prime_UTR
GTGTTGGTGGTGGTAGTGAA+GGG 0.611230 2_3:-61309691 None:intergenic
TGATGGTGCAAATGTAGGAC+TGG 0.612626 2_3:+61310914 Msa0304000:CDS
GATTGAGTCGGGTGTTATGG+CGG 0.615270 2_3:+61310233 Msa0304000:CDS
TTATAATGATCAAGATTGAG+GGG 0.618796 2_3:-61309910 None:intergenic
ACTTGGAAGCGATAACGCGC+GGG 0.618925 2_3:+61309377 Msa0304000:five_prime_UTR
GCGATGATCCTGACATCCCA+AGG 0.622537 2_3:+61312877 Msa0304000:CDS
TCCTCAAGTGCCAACACACG+CGG 0.628331 2_3:-61312961 None:intergenic
CATGTTAATCGAGTAACTGG+TGG 0.630388 2_3:+61311107 Msa0304000:CDS
ACTTAATGCCACTTGACCCG+AGG 0.633501 2_3:-61313368 None:intergenic
TGAATCAGCGGCCTAGAAGG+GGG 0.637197 2_3:+61313304 Msa0304000:three_prime_UTR
GATGGAATGTGTCTTTCTTG+CGG 0.640707 2_3:+61310543 Msa0304000:CDS
AAGATGGAAGGAAAAGCACC+AGG 0.641941 2_3:+61311529 Msa0304000:CDS
TAACTGCAGGAATCAGCCAA+TGG 0.642190 2_3:+61312828 Msa0304000:intron
GTAACGAGGAGGTAGAACTA+GGG 0.645913 2_3:-61312546 None:intergenic
AACTTGGAAGCGATAACGCG+CGG 0.651669 2_3:+61309376 Msa0304000:five_prime_UTR
GGTGGTAGTGAAGGGAAGAG+TGG 0.652981 2_3:-61309683 None:intergenic
GAAGAGGAGAAATGGCAACA+TGG 0.654485 2_3:-61309074 None:intergenic
TTGGCACTTGAGGAGAAAGA+GGG 0.655151 2_3:+61312970 Msa0304000:exon
CAGAGAGAGGAAAACAACCT+CGG 0.656267 2_3:-61309493 None:intergenic
AAATCCCAAATTAAAGTGCG+GGG 0.659404 2_3:+61309129 Msa0304000:five_prime_UTR
GTTTAAGCAGTATGAATCAG+CGG 0.660111 2_3:+61313292 Msa0304000:three_prime_UTR
CAGTAACAAATTGGACTCAG+CGG 0.667480 2_3:-61313424 None:intergenic
CACTTACTCAAACAAGTCCG+AGG 0.673486 2_3:+61309476 Msa0304000:five_prime_UTR
TGTTAAGACGAATGTTGATG+AGG 0.674731 2_3:+61310521 Msa0304000:CDS
AGGTGTATGAGATATTGCAT+CGG 0.681017 2_3:+61310313 Msa0304000:CDS
GTGATTGTGATTGACAACAC+GGG 0.685308 2_3:+61309344 Msa0304000:five_prime_UTR
ATATTTGCTAGGTGAACACA+AGG 0.686020 2_3:+61313072 Msa0304000:three_prime_UTR
TGTGATTGTGATTGACAACA+CGG 0.688700 2_3:+61309343 Msa0304000:five_prime_UTR
CAATCGTCATTTGAACCATG+GGG 0.695518 2_3:-61311200 None:intergenic
TCAAGTGCCAACACACGCGG+AGG 0.700374 2_3:-61312958 None:intergenic
TAGTGAAGGGAAGAGTGGCA+CGG 0.702188 2_3:-61309678 None:intergenic
TGAATCACAATGCTGCTGCG+TGG 0.702753 2_3:+61309559 Msa0304000:exon
GGGTGTTTGAGATAAAGTGT+TGG 0.707879 2_3:-61309707 None:intergenic
ACGAGCCAATTTAGACAACG+AGG 0.749343 2_3:-61310619 None:intergenic
TGATTGTGATTGACAACACG+GGG 0.752170 2_3:+61309345 Msa0304000:five_prime_UTR
ATAACTAGTGAGTAACGAGG+AGG 0.752971 2_3:-61312557 None:intergenic
TGAATAACTAGTGAGTAACG+AGG 0.775176 2_3:-61312560 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAATAAAAAATTACATT+AGG - chr2_3:61311267-61311286 None:intergenic 10.0%
!!! TTCATGAATTGATAAAATTT+TGG - chr2_3:61309543-61309562 None:intergenic 15.0%
!!! TTTTTTTTGTAAAATTCCAA+CGG - chr2_3:61309815-61309834 None:intergenic 15.0%
!! TAATATAGAAGAATTAGTAT+AGG + chr2_3:61310817-61310836 Msa0304000:intron 15.0%
!! ATAGAAAATTGGAAAAAAAA+TGG + chr2_3:61311161-61311180 Msa0304000:CDS 15.0%
!!! AGAATGAATTATATTTCTAA+AGG - chr2_3:61311862-61311881 None:intergenic 15.0%
!! TTATAGAATGTCTTATATTT+AGG + chr2_3:61312175-61312194 Msa0304000:intron 15.0%
!! TATAGAATGTCTTATATTTA+GGG + chr2_3:61312176-61312195 Msa0304000:intron 15.0%
!!! GTCTTCTTTTTTTTTTTTTT+TGG + chr2_3:61312314-61312333 Msa0304000:intron 15.0%
!!! ATGAAAGATGAATAATATTT+TGG + chr2_3:61312799-61312818 Msa0304000:intron 15.0%
!!! TGAAAGATGAATAATATTTT+GGG + chr2_3:61312800-61312819 Msa0304000:intron 15.0%
!! AATCTATAGAAATTCAAAAA+AGG - chr2_3:61313197-61313216 None:intergenic 15.0%
!!! TTTGTTTCTTAATTAAACAA+TGG - chr2_3:61313472-61313491 None:intergenic 15.0%
!! AACAGACTAATAATTTAAAT+AGG - chr2_3:61313603-61313622 None:intergenic 15.0%
!!! CATACTTTTCAATTATTAAA+TGG - chr2_3:61313684-61313703 None:intergenic 15.0%
!! CATTTAATAATTGAAAAGTA+TGG + chr2_3:61313682-61313701 Msa0304000:three_prime_UTR 15.0%
!!! TTTTTTTGTAAAATTCCAAC+GGG - chr2_3:61309814-61309833 None:intergenic 20.0%
!! ATTATAATGATCAAGATTGA+GGG - chr2_3:61309914-61309933 None:intergenic 20.0%
!! TATTATAATGATCAAGATTG+AGG - chr2_3:61309915-61309934 None:intergenic 20.0%
!!! AAATTTTTGAACAGATGTTA+AGG + chr2_3:61310007-61310026 Msa0304000:CDS 20.0%
!!! AATTTTTGAACAGATGTTAA+GGG + chr2_3:61310008-61310027 Msa0304000:CDS 20.0%
!!! TTTTAAGTAAACATAATCAC+TGG - chr2_3:61310705-61310724 None:intergenic 20.0%
!! TTAACATGCAAAATTATAAG+TGG - chr2_3:61311095-61311114 None:intergenic 20.0%
!! TCAATCTAACTAAAATATCA+TGG - chr2_3:61311240-61311259 None:intergenic 20.0%
!!! TTATTTTACATTTTCAACTC+TGG + chr2_3:61311284-61311303 Msa0304000:intron 20.0%
!! TTAATCCTAGTAATCTAATA+TGG + chr2_3:61311793-61311812 Msa0304000:intron 20.0%
!!! TGAAAGCATTTATACATAAA+GGG - chr2_3:61312071-61312090 None:intergenic 20.0%
!!! TTGAAAGCATTTATACATAA+AGG - chr2_3:61312072-61312091 None:intergenic 20.0%
!!! CTTTTTTTTTTTTTTTGGTC+AGG + chr2_3:61312319-61312338 Msa0304000:intron 20.0%
!! TATAGAAATTCAAAAAAGGA+AGG - chr2_3:61313193-61313212 None:intergenic 20.0%
!!! TCTCAATATTTAGAATAAGA+AGG + chr2_3:61313239-61313258 Msa0304000:intron 20.0%
!!! GCATATTTTATGGATATTAA+TGG - chr2_3:61313526-61313545 None:intergenic 20.0%
!! TGTTAGGAATGATTATTATT+AGG + chr2_3:61313553-61313572 Msa0304000:three_prime_UTR 20.0%
!! GTTAGGAATGATTATTATTA+GGG + chr2_3:61313554-61313573 Msa0304000:three_prime_UTR 20.0%
!!! AAACTTTTGATGATGTTTCA+TGG - chr2_3:61309031-61309050 None:intergenic 25.0%
! AAAAATCCCAAATTAAAGTG+CGG + chr2_3:61309127-61309146 Msa0304000:five_prime_UTR 25.0%
!!! GAGTCTCATTCTTTTAATTT+CGG + chr2_3:61309174-61309193 Msa0304000:five_prime_UTR 25.0%
!!! AGTCTCATTCTTTTAATTTC+GGG + chr2_3:61309175-61309194 Msa0304000:five_prime_UTR 25.0%
! ATACTATCTATCTATCGATA+GGG + chr2_3:61309411-61309430 Msa0304000:five_prime_UTR 25.0%
!!! TTTTTTGTAAAATTCCAACG+GGG - chr2_3:61309813-61309832 None:intergenic 25.0%
! TTATAATGATCAAGATTGAG+GGG - chr2_3:61309913-61309932 None:intergenic 25.0%
!!! TGATGGAAGTTTTTTTCATT+TGG + chr2_3:61309966-61309985 Msa0304000:CDS 25.0%
!!! GATGGAAGTTTTTTTCATTT+GGG + chr2_3:61309967-61309986 Msa0304000:CDS 25.0%
! GTTTACTTAAAAGCTGAATT+TGG + chr2_3:61310713-61310732 Msa0304000:intron 25.0%
!!! TCTATAAGTCTCTTGTTATT+TGG - chr2_3:61311146-61311165 None:intergenic 25.0%
! ACAAGAGACTTATAGAAAAT+TGG + chr2_3:61311150-61311169 Msa0304000:CDS 25.0%
! TATACATTTCCAACATTGAT+AGG + chr2_3:61311318-61311337 Msa0304000:intron 25.0%
!!! AATGTTGATTTGTTTATTGC+AGG + chr2_3:61311408-61311427 Msa0304000:intron 25.0%
!! CTATGATAATTTAGAATACC+TGG - chr2_3:61311550-61311569 None:intergenic 25.0%
! ATAATGAATGCATCTTGATA+TGG - chr2_3:61311592-61311611 None:intergenic 25.0%
! ATCAAGATGCATTCATTATA+AGG + chr2_3:61311593-61311612 Msa0304000:intron 25.0%
! GCATATTAAACAAAAAACTG+AGG - chr2_3:61311746-61311765 None:intergenic 25.0%
! TCATTCCATATTAGATTACT+AGG - chr2_3:61311801-61311820 None:intergenic 25.0%
! TAGTAATCTAATATGGAATG+AGG + chr2_3:61311800-61311819 Msa0304000:intron 25.0%
!! TTCTAAAGGAACTTAATTGT+AGG - chr2_3:61311848-61311867 None:intergenic 25.0%
! TAGATAAGAAAAATTGACAG+TGG - chr2_3:61311912-61311931 None:intergenic 25.0%
! TCTATGAAGTTTGTAAGAAA+AGG + chr2_3:61311928-61311947 Msa0304000:intron 25.0%
! TGTATAAATGCTTTCAATGT+TGG + chr2_3:61312075-61312094 Msa0304000:intron 25.0%
! TTTCATATTCCAAGACAAAT+TGG + chr2_3:61312100-61312119 Msa0304000:intron 25.0%
! TGTAAATGGTCCTATAATTA+GGG + chr2_3:61312212-61312231 Msa0304000:intron 25.0%
! ACAATGCATTATTATATGCA+GGG - chr2_3:61312411-61312430 None:intergenic 25.0%
! ATCATCTACTGTTTCATTAT+AGG - chr2_3:61312476-61312495 None:intergenic 25.0%
! AGAGAACAAGAAAATCAATT+GGG - chr2_3:61312599-61312618 None:intergenic 25.0%
!!! AATTGATTTTCTTGTTCTCT+CGG + chr2_3:61312599-61312618 Msa0304000:intron 25.0%
!!! ATATTTTTGTCCAATTCTGT+GGG + chr2_3:61312729-61312748 Msa0304000:intron 25.0%
! GTTTCTTAATTAAACAATGG+AGG - chr2_3:61313469-61313488 None:intergenic 25.0%
! GACTAATCATTTCATTTGAT+CGG + chr2_3:61313649-61313668 Msa0304000:three_prime_UTR 25.0%
! ACTAATCATTTCATTTGATC+GGG + chr2_3:61313650-61313669 Msa0304000:three_prime_UTR 25.0%
! TCAAACTTACGAAGAATTAA+TGG + chr2_3:61313750-61313769 Msa0304000:three_prime_UTR 25.0%
!!! GATTTTAGTTACTGTAGAAG+AGG - chr2_3:61309093-61309112 None:intergenic 30.0%
AAAATCCCAAATTAAAGTGC+GGG + chr2_3:61309128-61309147 Msa0304000:five_prime_UTR 30.0%
TCACAATCTAACTTCAACTT+AGG - chr2_3:61309328-61309347 None:intergenic 30.0%
CTATCGATAGATAGATAGTA+TGG - chr2_3:61309412-61309431 None:intergenic 30.0%
CATACTATCTATCTATCGAT+AGG + chr2_3:61309410-61309429 Msa0304000:five_prime_UTR 30.0%
AAGAATTGGAAGAGAGAAAT+GGG - chr2_3:61309636-61309655 None:intergenic 30.0%
AAAGAATTGGAAGAGAGAAA+TGG - chr2_3:61309637-61309656 None:intergenic 30.0%
!!! GGTTGATTGAGTGTTATTTT+GGG - chr2_3:61309737-61309756 None:intergenic 30.0%
!!! TGGTTGATTGAGTGTTATTT+TGG - chr2_3:61309738-61309757 None:intergenic 30.0%
! TTTTTGTAAAATTCCAACGG+GGG - chr2_3:61309812-61309831 None:intergenic 30.0%
TACCTTTGTACTGTTCAAAA+TGG + chr2_3:61309943-61309962 Msa0304000:CDS 30.0%
! TGATGATGATATGATTGAGT+CGG + chr2_3:61310221-61310240 Msa0304000:CDS 30.0%
AAATGATTGAAGTTTGCCTT+GGG - chr2_3:61310654-61310673 None:intergenic 30.0%
AAAATGATTGAAGTTTGCCT+TGG - chr2_3:61310655-61310674 None:intergenic 30.0%
!!! TCAATCATTTTCAGGTACAA+CGG + chr2_3:61310664-61310683 Msa0304000:intron 30.0%
! TTAAAAGCTGAATTTGGTGA+TGG + chr2_3:61310719-61310738 Msa0304000:intron 30.0%
AAAGGCAATCTACAAGTTAA+GGG - chr2_3:61310751-61310770 None:intergenic 30.0%
AAAGCATAACCACTATACAA+AGG - chr2_3:61310769-61310788 None:intergenic 30.0%
AGAAGAATTAGTATAGGCAT+AGG + chr2_3:61310823-61310842 Msa0304000:intron 30.0%
!! ATGTTTAACTTTTGCAGAAG+TGG + chr2_3:61310859-61310878 Msa0304000:intron 30.0%
!! TCTCTTGTTATTTGGATTCT+GGG - chr2_3:61311138-61311157 None:intergenic 30.0%
GTCTATATTCCTATCAATGT+TGG - chr2_3:61311330-61311349 None:intergenic 30.0%
! TTTTGACAAATGATGAGATG+AGG + chr2_3:61311468-61311487 Msa0304000:CDS 30.0%
TTTGACAAATGATGAGATGA+GGG + chr2_3:61311469-61311488 Msa0304000:CDS 30.0%
!!! GATTTTAAAACCACACCATA+GGG + chr2_3:61311686-61311705 Msa0304000:intron 30.0%
!!! ATTTTAAAACCACACCATAG+GGG + chr2_3:61311687-61311706 Msa0304000:intron 30.0%
GTAATAACTTTATTCCCCTA+TGG - chr2_3:61311704-61311723 None:intergenic 30.0%
AACAAAAAACTGAGGACAAT+AGG - chr2_3:61311738-61311757 None:intergenic 30.0%
GGATTAAAGTTAAGCAAACA+TGG - chr2_3:61311780-61311799 None:intergenic 30.0%
TTCCTATAATAAGGGACAAA+GGG - chr2_3:61311969-61311988 None:intergenic 30.0%
GTTAGGTGTTCCTATAATAA+GGG - chr2_3:61311977-61311996 None:intergenic 30.0%
TGTTAGGTGTTCCTATAATA+AGG - chr2_3:61311978-61311997 None:intergenic 30.0%
! TGATACCTGTGATTTTTGTT+AGG - chr2_3:61311994-61312013 None:intergenic 30.0%
CAGGTATCAAGAAAAATTGT+TGG + chr2_3:61312005-61312024 Msa0304000:intron 30.0%
ATAACACTACCAATTTGTCT+TGG - chr2_3:61312112-61312131 None:intergenic 30.0%
!! GACAAATTGGTAGTGTTATA+CGG + chr2_3:61312113-61312132 Msa0304000:intron 30.0%
!! ACAAATTGGTAGTGTTATAC+GGG + chr2_3:61312114-61312133 Msa0304000:intron 30.0%
GTGTAAATGGTCCTATAATT+AGG + chr2_3:61312211-61312230 Msa0304000:intron 30.0%
!!! GAATTTTTAGCCTTTCTTGT+TGG + chr2_3:61312271-61312290 Msa0304000:intron 30.0%
CAATGCATTATTATATGCAG+GGG - chr2_3:61312410-61312429 None:intergenic 30.0%
GACAATGCATTATTATATGC+AGG - chr2_3:61312412-61312431 None:intergenic 30.0%
ATTAATAGAAGACAACTAGC+AGG - chr2_3:61312434-61312453 None:intergenic 30.0%
GAGAGAACAAGAAAATCAAT+TGG - chr2_3:61312600-61312619 None:intergenic 30.0%
! TATCAACCACATCATTTTCT+TGG - chr2_3:61312646-61312665 None:intergenic 30.0%
!! GATATTTTTGTCCAATTCTG+TGG + chr2_3:61312728-61312747 Msa0304000:intron 30.0%
!! TATTTTTGTCCAATTCTGTG+GGG + chr2_3:61312730-61312749 Msa0304000:intron 30.0%
ATTCCAGGTGAGAAAAAATT+TGG - chr2_3:61313032-61313051 None:intergenic 30.0%
!!! TTTTTATTTTCCACGTAGCA+TGG - chr2_3:61313164-61313183 None:intergenic 30.0%
!! GGTTGATTTTCTTCTTCTTT+TGG + chr2_3:61313260-61313279 Msa0304000:intron 30.0%
!!! TTTTCTTCTTCTTTTGGTTC+AGG + chr2_3:61313266-61313285 Msa0304000:intron 30.0%
! TATATTTTGCGAAAGAACCT+CGG + chr2_3:61313351-61313370 Msa0304000:three_prime_UTR 30.0%
TTAAACAATGGAGGTTATGA+AGG - chr2_3:61313460-61313479 None:intergenic 30.0%
! ACACTTGAGTGCATATTTTA+TGG - chr2_3:61313536-61313555 None:intergenic 30.0%
AAAATATGCACTCAAGTGTT+AGG + chr2_3:61313537-61313556 Msa0304000:three_prime_UTR 30.0%
CTAATCATTTCATTTGATCG+GGG + chr2_3:61313651-61313670 Msa0304000:three_prime_UTR 30.0%
AATAAAACCACCATGAAAAC+AGG - chr2_3:61313709-61313728 None:intergenic 30.0%
!!! GTTTTCATGGTGGTTTTATT+TGG + chr2_3:61313709-61313728 Msa0304000:three_prime_UTR 30.0%
TGGCAACATGGTTTAATTGA+CGG - chr2_3:61309065-61309084 None:intergenic 35.0%
TTACTGTAGAAGAGGAGAAA+TGG - chr2_3:61309085-61309104 None:intergenic 35.0%
AAATCCCAAATTAAAGTGCG+GGG + chr2_3:61309129-61309148 Msa0304000:five_prime_UTR 35.0%
ACTTAGGACCTCATATCATA+CGG - chr2_3:61309312-61309331 None:intergenic 35.0%
TGTGATTGTGATTGACAACA+CGG + chr2_3:61309343-61309362 Msa0304000:five_prime_UTR 35.0%
CGATAGATAGATAGTATGGT+AGG - chr2_3:61309408-61309427 None:intergenic 35.0%
GGTGAGAATAGAAAAAAGAG+GGG - chr2_3:61309608-61309627 None:intergenic 35.0%
GGGTGAGAATAGAAAAAAGA+GGG - chr2_3:61309609-61309628 None:intergenic 35.0%
TGGGTGAGAATAGAAAAAAG+AGG - chr2_3:61309610-61309629 None:intergenic 35.0%
GTGTTTGAGAGAGAAAGAAT+TGG - chr2_3:61309650-61309669 None:intergenic 35.0%
!! TGTTTGAGATAAAGTGTTGG+TGG - chr2_3:61309707-61309726 None:intergenic 35.0%
!!! TGAGTGTTATTTTGGGAAGT+GGG - chr2_3:61309730-61309749 None:intergenic 35.0%
!!! TTGAGTGTTATTTTGGGAAG+TGG - chr2_3:61309731-61309750 None:intergenic 35.0%
CTTTGGTTGAAAGCTTGATT+GGG - chr2_3:61309765-61309784 None:intergenic 35.0%
! CACCATTTTGAACAGTACAA+AGG - chr2_3:61309948-61309967 None:intergenic 35.0%
TGTACTGTTCAAAATGGTGA+TGG + chr2_3:61309949-61309968 Msa0304000:CDS 35.0%
TTTCATTTGGGTCTTCAAAG+AGG + chr2_3:61309979-61309998 Msa0304000:CDS 35.0%
TTAGTAAACGTCGCTTCATT+CGG - chr2_3:61310045-61310064 None:intergenic 35.0%
GTACAAAAACCATACAAAGC+CGG - chr2_3:61310171-61310190 None:intergenic 35.0%
! TTGTATGGTTTTTGTACGAG+AGG + chr2_3:61310174-61310193 Msa0304000:CDS 35.0%
! TGTATGGTTTTTGTACGAGA+GGG + chr2_3:61310175-61310194 Msa0304000:CDS 35.0%
GATGATGATATGATTGAGTC+GGG + chr2_3:61310222-61310241 Msa0304000:CDS 35.0%
TGAGGTGAAGAATGAAGATA+AGG + chr2_3:61310293-61310312 Msa0304000:CDS 35.0%
AGGTGTATGAGATATTGCAT+CGG + chr2_3:61310313-61310332 Msa0304000:CDS 35.0%
!! ATGAGATATTGCATCGGTTA+AGG + chr2_3:61310319-61310338 Msa0304000:CDS 35.0%
!! TGAGATATTGCATCGGTTAA+GGG + chr2_3:61310320-61310339 Msa0304000:CDS 35.0%
! CTTTGAAGGTTATTGAGGAT+TGG + chr2_3:61310370-61310389 Msa0304000:CDS 35.0%
!! TATTGAGGATTGGTTTGAGT+CGG + chr2_3:61310380-61310399 Msa0304000:CDS 35.0%
ATGATGAGGAGATAAGAGAA+GGG + chr2_3:61310436-61310455 Msa0304000:CDS 35.0%
TGTTAAGACGAATGTTGATG+AGG + chr2_3:61310521-61310540 Msa0304000:CDS 35.0%
! GCAAAGTTTTCAGTCTCTTT+CGG - chr2_3:61310597-61310616 None:intergenic 35.0%
! GGCAAACTTCAATCATTTTC+AGG + chr2_3:61310656-61310675 Msa0304000:CDS 35.0%
CAAAGGCAATCTACAAGTTA+AGG - chr2_3:61310752-61310771 None:intergenic 35.0%
TGTAGATTGCCTTTGTATAG+TGG + chr2_3:61310757-61310776 Msa0304000:intron 35.0%
CTATAACCAACTGAAGACAT+AGG - chr2_3:61310796-61310815 None:intergenic 35.0%
AAAGCTGAATTCAGCAATGT+TGG - chr2_3:61310940-61310959 None:intergenic 35.0%
!! TGCTGAATTCAGCTTTAAAC+AGG + chr2_3:61310944-61310963 Msa0304000:CDS 35.0%
TCATGAAAGCAGCTACTTAA+TGG + chr2_3:61310998-61311017 Msa0304000:intron 35.0%
ATAATCAAGCTACAACCAAG+CGG - chr2_3:61311030-61311049 None:intergenic 35.0%
TAAGTGGCAATCTCTTTGAA+GGG - chr2_3:61311079-61311098 None:intergenic 35.0%
ATAAGTGGCAATCTCTTTGA+AGG - chr2_3:61311080-61311099 None:intergenic 35.0%
TTGCATGTTAATCGAGTAAC+TGG + chr2_3:61311104-61311123 Msa0304000:CDS 35.0%
!! GTCTCTTGTTATTTGGATTC+TGG - chr2_3:61311139-61311158 None:intergenic 35.0%
!!! TTTAGTGCAGCTGAGTTTTT+TGG - chr2_3:61311389-61311408 None:intergenic 35.0%
! GATTTGTTTATTGCAGGTAC+TGG + chr2_3:61311414-61311433 Msa0304000:intron 35.0%
!!! TAGTTTTTTCCCAAGATGGA+AGG + chr2_3:61311517-61311536 Msa0304000:CDS 35.0%
ATGCATTCATTATAAGGCAG+AGG + chr2_3:61311599-61311618 Msa0304000:intron 35.0%
AAAATCCTTGCTTCTAGTCA+TGG - chr2_3:61311672-61311691 None:intergenic 35.0%
!!! GGATTTTAAAACCACACCAT+AGG + chr2_3:61311685-61311704 Msa0304000:intron 35.0%
GGGAATAAAGTTATTACAGC+TGG + chr2_3:61311707-61311726 Msa0304000:intron 35.0%
AAAATTGACAGTGGAGCTAA+TGG - chr2_3:61311903-61311922 None:intergenic 35.0%
GTTCCTATAATAAGGGACAA+AGG - chr2_3:61311970-61311989 None:intergenic 35.0%
GAACACCTAACAAAAATCAC+AGG + chr2_3:61311986-61312005 Msa0304000:intron 35.0%
AGTGTTATACGGGATAGATT+TGG + chr2_3:61312124-61312143 Msa0304000:intron 35.0%
GACAGACAAGTTTGTGTAAA+TGG + chr2_3:61312198-61312217 Msa0304000:intron 35.0%
AATGGTCCTATAATTAGGGA+CGG + chr2_3:61312216-61312235 Msa0304000:intron 35.0%
!! TTTTTAGCCTTTCTTGTTGG+TGG + chr2_3:61312274-61312293 Msa0304000:intron 35.0%
TTAGTAACCACCAACAAGAA+AGG - chr2_3:61312284-61312303 None:intergenic 35.0%
TAAGGTGAATTCTAGCCATT+AGG - chr2_3:61312348-61312367 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG + chr2_3:61312350-61312369 Msa0304000:intron 35.0%
GGCTAGAATTCACCTTATAA+GGG + chr2_3:61312351-61312370 Msa0304000:intron 35.0%
GCTAGAATTCACCTTATAAG+GGG + chr2_3:61312352-61312371 Msa0304000:intron 35.0%
ACCTTATAAGGGGAATAAGT+GGG + chr2_3:61312362-61312381 Msa0304000:intron 35.0%
!!! CAGTAGATGATGCCTTTTTT+TGG + chr2_3:61312485-61312504 Msa0304000:intron 35.0%
TGAATAACTAGTGAGTAACG+AGG - chr2_3:61312563-61312582 None:intergenic 35.0%
TCGTTACTCACTAGTTATTC+AGG + chr2_3:61312562-61312581 Msa0304000:CDS 35.0%
TTTCCACCAAGAAAATGATG+TGG + chr2_3:61312637-61312656 Msa0304000:intron 35.0%
!!! AGTTTTAAACCCCACAGAAT+TGG - chr2_3:61312742-61312761 None:intergenic 35.0%
!! ATTTTGGGAAATGTAACTGC+AGG + chr2_3:61312815-61312834 Msa0304000:intron 35.0%
!!! CATCCAAATTTTTTCTCACC+TGG + chr2_3:61313026-61313045 Msa0304000:three_prime_UTR 35.0%
! ATATTTGCTAGGTGAACACA+AGG + chr2_3:61313072-61313091 Msa0304000:three_prime_UTR 35.0%
GTTTAAGCAGTATGAATCAG+CGG + chr2_3:61313292-61313311 Msa0304000:three_prime_UTR 35.0%
! ATATTTTGCGAAAGAACCTC+GGG + chr2_3:61313352-61313371 Msa0304000:three_prime_UTR 35.0%
AGACTGAAGCAGTAACAAAT+TGG - chr2_3:61313436-61313455 None:intergenic 35.0%
! TGATTATTATTAGGGTGCCA+TGG + chr2_3:61313562-61313581 Msa0304000:three_prime_UTR 35.0%
!!! TGCCATGGAGTACAATTTTT+TGG + chr2_3:61313577-61313596 Msa0304000:three_prime_UTR 35.0%
! AAAGTATGGACCTGTTTTCA+TGG + chr2_3:61313696-61313715 Msa0304000:three_prime_UTR 35.0%
! AGTTTTCAAACAGCGATATG+AGG + chr2_3:61313787-61313806 Msa0304000:three_prime_UTR 35.0%
GGCAACATGGTTTAATTGAC+GGG - chr2_3:61309064-61309083 None:intergenic 40.0%
AGCCTGTTGGATTAATCCAA+CGG + chr2_3:61309251-61309270 Msa0304000:five_prime_UTR 40.0%
AACCGTTGGATTAATCCAAC+AGG - chr2_3:61309256-61309275 None:intergenic 40.0%
GTGATTGTGATTGACAACAC+GGG + chr2_3:61309344-61309363 Msa0304000:five_prime_UTR 40.0%
TGATTGTGATTGACAACACG+GGG + chr2_3:61309345-61309364 Msa0304000:five_prime_UTR 40.0%
AAACAAAGAGAGACAGAGAG+AGG - chr2_3:61309509-61309528 None:intergenic 40.0%
AGAAAAAAGAGGGGTGAGTT+TGG - chr2_3:61309599-61309618 None:intergenic 40.0%
!! TTGAGATAAAGTGTTGGTGG+TGG - chr2_3:61309704-61309723 None:intergenic 40.0%
! GGGTGTTTGAGATAAAGTGT+TGG - chr2_3:61309710-61309729 None:intergenic 40.0%
! TGAAAGCTTGATTGGGTTAG+TGG - chr2_3:61309758-61309777 None:intergenic 40.0%
GCTTTGGTTGAAAGCTTGAT+TGG - chr2_3:61309766-61309785 None:intergenic 40.0%
! TTCTTGAGCAGCTTTTCTTC+TGG - chr2_3:61309788-61309807 None:intergenic 40.0%
AAGTGCTTGAAGAACATCAC+TGG - chr2_3:61309857-61309876 None:intergenic 40.0%
AACAACTCAAAAGCCATCTC+AGG - chr2_3:61310099-61310118 None:intergenic 40.0%
TTGAAGCAGATGAAGAGAGT+AGG + chr2_3:61310117-61310136 Msa0304000:CDS 40.0%
! AAAGTTGAGGTCTTATGGTC+CGG + chr2_3:61310149-61310168 Msa0304000:CDS 40.0%
! GTATGGTTTTTGTACGAGAG+GGG + chr2_3:61310176-61310195 Msa0304000:CDS 40.0%
GGATGCTAAGAAAGCTTATG+AGG + chr2_3:61310197-61310216 Msa0304000:CDS 40.0%
TATGATTGAGTCGGGTGTTA+TGG + chr2_3:61310230-61310249 Msa0304000:CDS 40.0%
! GTCGACTTTGAAGGTTATTG+AGG + chr2_3:61310365-61310384 Msa0304000:CDS 40.0%
TCGGAATATGCGATGAAGAT+TGG + chr2_3:61310399-61310418 Msa0304000:CDS 40.0%
CGGAATATGCGATGAAGATT+GGG + chr2_3:61310400-61310419 Msa0304000:CDS 40.0%
GATGATGAGGAGATAAGAGA+AGG + chr2_3:61310435-61310454 Msa0304000:CDS 40.0%
AGATAAGAGAAGGGTTTGTG+AGG + chr2_3:61310445-61310464 Msa0304000:CDS 40.0%
GATAAGAGAAGGGTTTGTGA+GGG + chr2_3:61310446-61310465 Msa0304000:CDS 40.0%
ATAAGAGAAGGGTTTGTGAG+GGG + chr2_3:61310447-61310466 Msa0304000:CDS 40.0%
! AAGACGAATGTTGATGAGGA+TGG + chr2_3:61310525-61310544 Msa0304000:CDS 40.0%
GATGGAATGTGTCTTTCTTG+CGG + chr2_3:61310543-61310562 Msa0304000:CDS 40.0%
TTCAAGCCTATGTCTTCAGT+TGG + chr2_3:61310787-61310806 Msa0304000:intron 40.0%
CAGAAGTGGCTTGAAAAGAA+TGG + chr2_3:61310873-61310892 Msa0304000:intron 40.0%
CATCAACAACAGCATCAAAC+GGG - chr2_3:61310899-61310918 None:intergenic 40.0%
CCATCAACAACAGCATCAAA+CGG - chr2_3:61310900-61310919 None:intergenic 40.0%
!! GTTGTTGATGGTGCAAATGT+AGG + chr2_3:61310909-61310928 Msa0304000:CDS 40.0%
!! AGCTTTAAACAGGTACGTGT+GGG + chr2_3:61310954-61310973 Msa0304000:intron 40.0%
ACTTAATGGTTCTTTCCGCT+TGG + chr2_3:61311012-61311031 Msa0304000:intron 40.0%
CATGTTAATCGAGTAACTGG+TGG + chr2_3:61311107-61311126 Msa0304000:CDS 40.0%
!! TTGTTATTTGGATTCTGGGC+AGG - chr2_3:61311134-61311153 None:intergenic 40.0%
CAATCGTCATTTGAACCATG+GGG - chr2_3:61311203-61311222 None:intergenic 40.0%
CCAATCGTCATTTGAACCAT+GGG - chr2_3:61311204-61311223 None:intergenic 40.0%
ACCAATCGTCATTTGAACCA+TGG - chr2_3:61311205-61311224 None:intergenic 40.0%
AAAAACTAGAGCCCAGAAGT+TGG - chr2_3:61311505-61311524 None:intergenic 40.0%
!!! GCTCTAGTTTTTTCCCAAGA+TGG + chr2_3:61311513-61311532 Msa0304000:CDS 40.0%
AACTTTATTCCCCTATGGTG+TGG - chr2_3:61311699-61311718 None:intergenic 40.0%
AAAACTGAGGACAATAGGCA+TGG - chr2_3:61311733-61311752 None:intergenic 40.0%
CTCCCTTTGTCCCTTATTAT+AGG + chr2_3:61311964-61311983 Msa0304000:intron 40.0%
GGCTAAAAATTCTCGAGAAC+TGG - chr2_3:61312263-61312282 None:intergenic 40.0%
!! TTTTTGGTCAGGTAGCCTAA+TGG + chr2_3:61312330-61312349 Msa0304000:intron 40.0%
CACCTTATAAGGGGAATAAG+TGG + chr2_3:61312361-61312380 Msa0304000:intron 40.0%
CCTTATAAGGGGAATAAGTG+GGG + chr2_3:61312363-61312382 Msa0304000:intron 40.0%
ATTATTATATGCAGGGGCTG+GGG - chr2_3:61312404-61312423 None:intergenic 40.0%
CATTATTATATGCAGGGGCT+GGG - chr2_3:61312405-61312424 None:intergenic 40.0%
!!! GATGCCTTTTTTTGGTTTGC+AGG + chr2_3:61312493-61312512 Msa0304000:intron 40.0%
CGAACCTGCAAACCAAAAAA+AGG - chr2_3:61312500-61312519 None:intergenic 40.0%
ATAACTAGTGAGTAACGAGG+AGG - chr2_3:61312560-61312579 None:intergenic 40.0%
! CAACCACATCATTTTCTTGG+TGG - chr2_3:61312643-61312662 None:intergenic 40.0%
AAAGCTAAGCCAGCAGAAAT+GGG - chr2_3:61312669-61312688 None:intergenic 40.0%
TGACACATAGCCATTTCCTT+GGG - chr2_3:61312896-61312915 None:intergenic 40.0%
!!! AGGGAGTGTTTTGATCTTCT+TGG + chr2_3:61312989-61313008 Msa0304000:three_prime_UTR 40.0%
AGAGCTCATGTCAGCTATTA+AGG - chr2_3:61313222-61313241 None:intergenic 40.0%
AGAGCGATTGATTGCATGAT+CGG + chr2_3:61313398-61313417 Msa0304000:three_prime_UTR 40.0%
AGTAACAAATTGGACTCAGC+GGG - chr2_3:61313426-61313445 None:intergenic 40.0%
CAGTAACAAATTGGACTCAG+CGG - chr2_3:61313427-61313446 None:intergenic 40.0%
GGCCAAAAAATTGTACTCCA+TGG - chr2_3:61313582-61313601 None:intergenic 40.0%
GAAGAGGAGAAATGGCAACA+TGG - chr2_3:61309077-61309096 None:intergenic 45.0%
! TTCGCCCCGCACTTTAATTT+GGG - chr2_3:61309136-61309155 None:intergenic 45.0%
! CTTTTTGTCTCTCAGCCTGT+TGG + chr2_3:61309238-61309257 Msa0304000:five_prime_UTR 45.0%
TGAGATTAGCGCAGGATTGA+AGG + chr2_3:61309275-61309294 Msa0304000:five_prime_UTR 45.0%
GAGAGGATCCGTATGATATG+AGG + chr2_3:61309301-61309320 Msa0304000:five_prime_UTR 45.0%
ATTGACAACACGGGGAAGTT+GGG + chr2_3:61309353-61309372 Msa0304000:five_prime_UTR 45.0%
CACTTACTCAAACAAGTCCG+AGG + chr2_3:61309476-61309495 Msa0304000:five_prime_UTR 45.0%
CAGAGAGAGGAAAACAACCT+CGG - chr2_3:61309496-61309515 None:intergenic 45.0%
GGTGAGTTTGGCCATTGAAA+CGG - chr2_3:61309587-61309606 None:intergenic 45.0%
!!! AGCAGCTTTTCTTCTGGCTT+TGG - chr2_3:61309782-61309801 None:intergenic 45.0%
CGACGTTTACTAATGCTGCT+AGG + chr2_3:61310052-61310071 Msa0304000:CDS 45.0%
TAGGAATTGCGCCAAAGTTG+AGG + chr2_3:61310136-61310155 Msa0304000:CDS 45.0%
GGACCATAAGACCTCAACTT+TGG - chr2_3:61310150-61310169 None:intergenic 45.0%
! TCTTATGGTCCGGCTTTGTA+TGG + chr2_3:61310159-61310178 Msa0304000:CDS 45.0%
!! GCTTTTGGAGGTTAGTGTTG+AGG + chr2_3:61310275-61310294 Msa0304000:CDS 45.0%
ATGCGATGAAGATTGGGAAG+AGG + chr2_3:61310406-61310425 Msa0304000:CDS 45.0%
TGCGATGAAGATTGGGAAGA+GGG + chr2_3:61310407-61310426 Msa0304000:CDS 45.0%
TGCTGCCTCGTTGTCTAAAT+TGG + chr2_3:61310614-61310633 Msa0304000:CDS 45.0%
ACGAGCCAATTTAGACAACG+AGG - chr2_3:61310622-61310641 None:intergenic 45.0%
GGCAATCTACAAGTTAAGGG+AGG - chr2_3:61310748-61310767 None:intergenic 45.0%
CCGTTTGATGCTGTTGTTGA+TGG + chr2_3:61310897-61310916 Msa0304000:CDS 45.0%
! TGATGGTGCAAATGTAGGAC+TGG + chr2_3:61310914-61310933 Msa0304000:CDS 45.0%
!! CAGCTTTAAACAGGTACGTG+TGG + chr2_3:61310953-61310972 Msa0304000:intron 45.0%
GTTCTTTATGCTACTCCCCA+TGG + chr2_3:61311185-61311204 Msa0304000:CDS 45.0%
CCCATGGTTCAAATGACGAT+TGG + chr2_3:61311201-61311220 Msa0304000:CDS 45.0%
GACCACTTGTTCCAACTTCT+GGG + chr2_3:61311491-61311510 Msa0304000:CDS 45.0%
! GGTGCTTTTCCTTCCATCTT+GGG - chr2_3:61311529-61311548 None:intergenic 45.0%
! TGGTGCTTTTCCTTCCATCT+TGG - chr2_3:61311530-61311549 None:intergenic 45.0%
!! AAGATGGAAGGAAAAGCACC+AGG + chr2_3:61311529-61311548 Msa0304000:CDS 45.0%
TCTAGCCATGACTAGAAGCA+AGG + chr2_3:61311664-61311683 Msa0304000:intron 45.0%
AGCAAACATGGTTGTGCAGA+AGG - chr2_3:61311768-61311787 None:intergenic 45.0%
GACAGTGGAGCTAATGGTTA+GGG - chr2_3:61311897-61311916 None:intergenic 45.0%
TGACAGTGGAGCTAATGGTT+AGG - chr2_3:61311898-61311917 None:intergenic 45.0%
GTCCTATAATTAGGGACGGA+GGG + chr2_3:61312220-61312239 Msa0304000:intron 45.0%
CCCCACTTATTCCCCTTATA+AGG - chr2_3:61312366-61312385 None:intergenic 45.0%
GCATTATTATATGCAGGGGC+TGG - chr2_3:61312406-61312425 None:intergenic 45.0%
GTAACGAGGAGGTAGAACTA+GGG - chr2_3:61312549-61312568 None:intergenic 45.0%
AGTAACGAGGAGGTAGAACT+AGG - chr2_3:61312550-61312569 None:intergenic 45.0%
! TGGTTGATACCCATTTCTGC+TGG + chr2_3:61312657-61312676 Msa0304000:intron 45.0%
CAAAGCTAAGCCAGCAGAAA+TGG - chr2_3:61312670-61312689 None:intergenic 45.0%
ACTCAATGCATTGAGCACAC+TGG - chr2_3:61312707-61312726 None:intergenic 45.0%
TAACTGCAGGAATCAGCCAA+TGG + chr2_3:61312828-61312847 Msa0304000:intron 45.0%
AGGAATCAGCCAATGGAAGT+TGG + chr2_3:61312835-61312854 Msa0304000:intron 45.0%
ATCCTGACATCCCAAGGAAA+TGG + chr2_3:61312883-61312902 Msa0304000:CDS 45.0%
GTGACACATAGCCATTTCCT+TGG - chr2_3:61312897-61312916 None:intergenic 45.0%
TTGGCACTTGAGGAGAAAGA+GGG + chr2_3:61312970-61312989 Msa0304000:exon 45.0%
TATGAATCAGCGGCCTAGAA+GGG + chr2_3:61313302-61313321 Msa0304000:three_prime_UTR 45.0%
TACAGATACTTCCCCCTTCT+AGG - chr2_3:61313318-61313337 None:intergenic 45.0%
CATGCATGATGCTCAGCAAA+TGG - chr2_3:61313630-61313649 None:intergenic 45.0%
! GTATGGACCTGTTTTCATGG+TGG + chr2_3:61313699-61313718 Msa0304000:three_prime_UTR 45.0%
CTTCGCCCCGCACTTTAATT+TGG - chr2_3:61309137-61309156 None:intergenic 50.0%
ATTAGCGCAGGATTGAAGGC+AGG + chr2_3:61309279-61309298 Msa0304000:five_prime_UTR 50.0%
GATTGACAACACGGGGAAGT+TGG + chr2_3:61309352-61309371 Msa0304000:five_prime_UTR 50.0%
AACTTGGAAGCGATAACGCG+CGG + chr2_3:61309376-61309395 Msa0304000:five_prime_UTR 50.0%
TGAATCACAATGCTGCTGCG+TGG + chr2_3:61309559-61309578 Msa0304000:exon 50.0%
GGAAGAGAGAAATGGGCGAT+GGG - chr2_3:61309629-61309648 None:intergenic 50.0%
TGGAAGAGAGAAATGGGCGA+TGG - chr2_3:61309630-61309649 None:intergenic 50.0%
TAGTGAAGGGAAGAGTGGCA+CGG - chr2_3:61309681-61309700 None:intergenic 50.0%
!! GTGTTGGTGGTGGTAGTGAA+GGG - chr2_3:61309694-61309713 None:intergenic 50.0%
!! AGTGTTGGTGGTGGTAGTGA+AGG - chr2_3:61309695-61309714 None:intergenic 50.0%
! GAACATGTGCTTTTCGCGCT+TGG - chr2_3:61309891-61309910 None:intergenic 50.0%
! TGCTAGGTTAGCTGCTGCTA+AGG + chr2_3:61310068-61310087 Msa0304000:CDS 50.0%
! TAGGTTAGCTGCTGCTAAGG+AGG + chr2_3:61310071-61310090 Msa0304000:CDS 50.0%
TGCTAAGGAGGATCCTGAGA+TGG + chr2_3:61310083-61310102 Msa0304000:CDS 50.0%
GCGCCAAAGTTGAGGTCTTA+TGG + chr2_3:61310144-61310163 Msa0304000:CDS 50.0%
! GATTGAGTCGGGTGTTATGG+CGG + chr2_3:61310233-61310252 Msa0304000:CDS 50.0%
!! GGATGAGCTTTGTGCGCTTT+TGG + chr2_3:61310260-61310279 Msa0304000:CDS 50.0%
!! TGAGCTTTGTGCGCTTTTGG+AGG + chr2_3:61310263-61310282 Msa0304000:CDS 50.0%
!! ATTGCATCGGTTAAGGGCTG+TGG + chr2_3:61310326-61310345 Msa0304000:CDS 50.0%
ATCGGTTAAGGGCTGTGGTT+AGG + chr2_3:61310331-61310350 Msa0304000:CDS 50.0%
! GGTGTCTGAGTCGACTTTGA+AGG + chr2_3:61310356-61310375 Msa0304000:CDS 50.0%
TGAAGATTGGGAAGAGGGAG+TGG + chr2_3:61310412-61310431 Msa0304000:CDS 50.0%
GAAGATTGGGAAGAGGGAGT+GGG + chr2_3:61310413-61310432 Msa0304000:CDS 50.0%
GGCTCGTGAAAAACAACCCA+AGG + chr2_3:61310635-61310654 Msa0304000:CDS 50.0%
GGACCACTTGTTCCAACTTC+TGG + chr2_3:61311490-61311509 Msa0304000:CDS 50.0%
AGCCCAGAAGTTGGAACAAG+TGG - chr2_3:61311496-61311515 None:intergenic 50.0%
GGTCCTATAATTAGGGACGG+AGG + chr2_3:61312219-61312238 Msa0304000:intron 50.0%
CTCCCTCCGTCCCTAATTAT+AGG - chr2_3:61312225-61312244 None:intergenic 50.0%
CGAGTATCAGTCTCAACTCG+TGG + chr2_3:61312518-61312537 Msa0304000:CDS 50.0%
TGGCACATGCCAACTTCCAT+TGG - chr2_3:61312847-61312866 None:intergenic 50.0%
GGATCATCGCTAGCTACAGT+TGG - chr2_3:61312867-61312886 None:intergenic 50.0%
AGCCATTTCCTTGGGATGTC+AGG - chr2_3:61312888-61312907 None:intergenic 50.0%
GTTGGCACTTGAGGAGAAAG+AGG + chr2_3:61312969-61312988 Msa0304000:exon 50.0%
GTGCAGCTGCGATATTTGCT+AGG + chr2_3:61313061-61313080 Msa0304000:three_prime_UTR 50.0%
TCCTTTAGCACCATGCTACG+TGG + chr2_3:61313151-61313170 Msa0304000:intron 50.0%
! TCCACGTAGCATGGTGCTAA+AGG - chr2_3:61313155-61313174 None:intergenic 50.0%
GTATGAATCAGCGGCCTAGA+AGG + chr2_3:61313301-61313320 Msa0304000:three_prime_UTR 50.0%
ATGAATCAGCGGCCTAGAAG+GGG + chr2_3:61313303-61313322 Msa0304000:three_prime_UTR 50.0%
! ACTTAATGCCACTTGACCCG+AGG - chr2_3:61313371-61313390 None:intergenic 50.0%
CATTTCATTTGATCGGGGCG+TGG + chr2_3:61313656-61313675 Msa0304000:three_prime_UTR 50.0%
TTAAAGTGCGGGGCGAAGCT+TGG + chr2_3:61309139-61309158 Msa0304000:five_prime_UTR 55.0%
CCTGCGCTAATCTCAACCGT+TGG - chr2_3:61309270-61309289 None:intergenic 55.0%
CCAACGGTTGAGATTAGCGC+AGG + chr2_3:61309267-61309286 Msa0304000:five_prime_UTR 55.0%
ACACGGGGAAGTTGGGAACT+TGG + chr2_3:61309360-61309379 Msa0304000:five_prime_UTR 55.0%
ACTTGGAAGCGATAACGCGC+GGG + chr2_3:61309377-61309396 Msa0304000:five_prime_UTR 55.0%
GCTGCGTGGAACCGTTTCAA+TGG + chr2_3:61309573-61309592 Msa0304000:CDS 55.0%
! GGTGGTAGTGAAGGGAAGAG+TGG - chr2_3:61309686-61309705 None:intergenic 55.0%
! CTTTTCGCGCTTGGTCGTAG+AGG - chr2_3:61309882-61309901 None:intergenic 55.0%
GTTAAGGGCTGTGGTTAGGC+AGG + chr2_3:61310335-61310354 Msa0304000:CDS 55.0%
GAAGAGGGAGTGGGATGATG+AGG + chr2_3:61310422-61310441 Msa0304000:CDS 55.0%
AGAGAAGGGTTTGTGAGGGG+AGG + chr2_3:61310450-61310469 Msa0304000:CDS 55.0%
!! GTGGTGGATGGCATGGTCAA+GGG + chr2_3:61310472-61310491 Msa0304000:CDS 55.0%
! AGGGGAATAAGTGGGGTGTC+TGG + chr2_3:61312370-61312389 Msa0304000:intron 55.0%
! GGGGAATAAGTGGGGTGTCT+GGG + chr2_3:61312371-61312390 Msa0304000:intron 55.0%
! GGGAATAAGTGGGGTGTCTG+GGG + chr2_3:61312372-61312391 Msa0304000:intron 55.0%
GCGATGATCCTGACATCCCA+AGG + chr2_3:61312877-61312896 Msa0304000:CDS 55.0%
ACATCAACCTCCGCGTGTGT+TGG + chr2_3:61312951-61312970 Msa0304000:CDS 55.0%
TCCTCAAGTGCCAACACACG+CGG - chr2_3:61312964-61312983 None:intergenic 55.0%
CTGCACACAACTGCGATTCC+AGG - chr2_3:61313047-61313066 None:intergenic 55.0%
TGAATCAGCGGCCTAGAAGG+GGG + chr2_3:61313304-61313323 Msa0304000:three_prime_UTR 55.0%
CGAAAGAACCTCGGGTCAAG+TGG + chr2_3:61313360-61313379 Msa0304000:three_prime_UTR 55.0%
! GGGGCGAAGCTTGGTGAAGA+TGG + chr2_3:61309148-61309167 Msa0304000:five_prime_UTR 60.0%
CGCAGGATTGAAGGCAGGAG+AGG + chr2_3:61309284-61309303 Msa0304000:five_prime_UTR 60.0%
GCTGCTCAAGAATCCCCCGT+TGG + chr2_3:61309796-61309815 Msa0304000:CDS 60.0%
! TGAGTCGGGTGTTATGGCGG+AGG + chr2_3:61310236-61310255 Msa0304000:CDS 60.0%
GAAGGGTTTGTGAGGGGAGG+TGG + chr2_3:61310453-61310472 Msa0304000:CDS 60.0%
!! TTGTGAGGGGAGGTGGTGGA+TGG + chr2_3:61310460-61310479 Msa0304000:CDS 60.0%
!! GGTGGTGGATGGCATGGTCA+AGG + chr2_3:61310471-61310490 Msa0304000:CDS 60.0%
GTGGATGGCATGGTCAAGGG+TGG + chr2_3:61310475-61310494 Msa0304000:CDS 60.0%
TGGCATGGTCAAGGGTGGCT+TGG + chr2_3:61310480-61310499 Msa0304000:CDS 60.0%
! GGTCAAGGGTGGCTTGGAAG+CGG + chr2_3:61310486-61310505 Msa0304000:CDS 60.0%
! GTCAAGGGTGGCTTGGAAGC+GGG + chr2_3:61310487-61310506 Msa0304000:CDS 60.0%
GCTTGGAAGCGGGCAATGGA+AGG + chr2_3:61310497-61310516 Msa0304000:CDS 60.0%
TCAAGTGCCAACACACGCGG+AGG - chr2_3:61312961-61312980 None:intergenic 60.0%
! TCCGCGTGTGTTGGCACTTG+AGG + chr2_3:61312960-61312979 Msa0304000:CDS 60.0%
! GTCGGGTGTTATGGCGGAGG+AGG + chr2_3:61310239-61310258 Msa0304000:CDS 65.0%
GGGTTTGTGAGGGGAGGTGG+TGG + chr2_3:61310456-61310475 Msa0304000:CDS 65.0%
!! AGGGGAGGTGGTGGATGGCA+TGG + chr2_3:61310465-61310484 Msa0304000:CDS 65.0%
! GGTGGCTTGGAAGCGGGCAA+TGG + chr2_3:61310493-61310512 Msa0304000:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 61309011 61313827 61309011 ID=Msa0304000;Name=Msa0304000
chr2_3 mRNA 61309011 61313827 61309011 ID=Msa0304000-mRNA-1;Parent=Msa0304000;Name=Msa0304000-mRNA-1;_AED=0.04;_eAED=0.04;_QI=533|1|1|1|0.71|0.5|8|653|571
chr2_3 exon 61309011 61309213 61309011 ID=Msa0304000-mRNA-1:exon:20218;Parent=Msa0304000-mRNA-1
chr2_3 exon 61309238 61310677 61309238 ID=Msa0304000-mRNA-1:exon:20219;Parent=Msa0304000-mRNA-1
chr2_3 exon 61310876 61310965 61310876 ID=Msa0304000-mRNA-1:exon:20220;Parent=Msa0304000-mRNA-1
chr2_3 exon 61311041 61311222 61311041 ID=Msa0304000-mRNA-1:exon:20221;Parent=Msa0304000-mRNA-1
chr2_3 exon 61311430 61311550 61311430 ID=Msa0304000-mRNA-1:exon:20222;Parent=Msa0304000-mRNA-1
chr2_3 exon 61312515 61312583 61312515 ID=Msa0304000-mRNA-1:exon:20223;Parent=Msa0304000-mRNA-1
chr2_3 exon 61312837 61313093 61312837 ID=Msa0304000-mRNA-1:exon:20224;Parent=Msa0304000-mRNA-1
chr2_3 exon 61313288 61313827 61313288 ID=Msa0304000-mRNA-1:exon:20225;Parent=Msa0304000-mRNA-1
chr2_3 five_prime_UTR 61309011 61309213 61309011 ID=Msa0304000-mRNA-1:five_prime_utr;Parent=Msa0304000-mRNA-1
chr2_3 five_prime_UTR 61309238 61309567 61309238 ID=Msa0304000-mRNA-1:five_prime_utr;Parent=Msa0304000-mRNA-1
chr2_3 CDS 61309568 61310677 61309568 ID=Msa0304000-mRNA-1:cds;Parent=Msa0304000-mRNA-1
chr2_3 CDS 61310876 61310965 61310876 ID=Msa0304000-mRNA-1:cds;Parent=Msa0304000-mRNA-1
chr2_3 CDS 61311041 61311222 61311041 ID=Msa0304000-mRNA-1:cds;Parent=Msa0304000-mRNA-1
chr2_3 CDS 61311430 61311550 61311430 ID=Msa0304000-mRNA-1:cds;Parent=Msa0304000-mRNA-1
chr2_3 CDS 61312515 61312583 61312515 ID=Msa0304000-mRNA-1:cds;Parent=Msa0304000-mRNA-1
chr2_3 CDS 61312837 61312980 61312837 ID=Msa0304000-mRNA-1:cds;Parent=Msa0304000-mRNA-1
chr2_3 three_prime_UTR 61312981 61313093 61312981 ID=Msa0304000-mRNA-1:three_prime_utr;Parent=Msa0304000-mRNA-1
chr2_3 three_prime_UTR 61313288 61313827 61313288 ID=Msa0304000-mRNA-1:three_prime_utr;Parent=Msa0304000-mRNA-1
Gene Sequence

>Msa0304000

ATGCTGCTGCGTGGAACCGTTTCAATGGCCAAACTCACCCCTCTTTTTTCTATTCTCACCCATCGCCCATTTCTCTCTTCCAATTCTTTCTCTCTCAAACACACTTTCAACCGTGCCACTCTTCCCTTCACTACCACCACCAACACTTTATCTCAAACACCCACTTCCCAAAATAACACTCAATCAACCACTAACCCAATCAAGCTTTCAACCAAAGCCAGAAGAAAAGCTGCTCAAGAATCCCCCGTTGGAATTTTACAAAAAAAACTCAACAACTGTTCTAAAACCAGTGATGTTCTTCAAGCACTTAACCTCTACGACCAAGCGCGAAAAGCACATGTTCCCCTCAATCTTGATCATTATAATAAACTCTTATACCTTTGTACTGTTCAAAATGGTGATGGAAGTTTTTTTCATTTGGGTCTTCAAAGAGGTTTTGAAATTTTTGAACAGATGTTAAGGGACAATGTTGATCCGAATGAAGCGACGTTTACTAATGCTGCTAGGTTAGCTGCTGCTAAGGAGGATCCTGAGATGGCTTTTGAGTTGTTGAAGCAGATGAAGAGAGTAGGAATTGCGCCAAAGTTGAGGTCTTATGGTCCGGCTTTGTATGGTTTTTGTACGAGAGGGGATGCTAAGAAAGCTTATGAGGTTGATGATGATATGATTGAGTCGGGTGTTATGGCGGAGGAGGATGAGCTTTGTGCGCTTTTGGAGGTTAGTGTTGAGGTGAAGAATGAAGATAAGGTGTATGAGATATTGCATCGGTTAAGGGCTGTGGTTAGGCAGGTGTCTGAGTCGACTTTGAAGGTTATTGAGGATTGGTTTGAGTCGGAATATGCGATGAAGATTGGGAAGAGGGAGTGGGATGATGAGGAGATAAGAGAAGGGTTTGTGAGGGGAGGTGGTGGATGGCATGGTCAAGGGTGGCTTGGAAGCGGGCAATGGAAGGTTGTTAAGACGAATGTTGATGAGGATGGAATGTGTCTTTCTTGCGGTGAGAAGCTCGTGAGCATTGATATTGATCCGAAAGAGACTGAAAACTTTGCTGCCTCGTTGTCTAAATTGGCTCGTGAAAAACAACCCAAGGCAAACTTCAATCATTTTCAGAAGTGGCTTGAAAAGAATGGCCCGTTTGATGCTGTTGTTGATGGTGCAAATGTAGGACTGGCCAACATTGCTGAATTCAGCTTTAAACAGCTTGATTATGCTGTTCGACAATTGCGTCAACTGAGCCCTTCAAAGAGATTGCCACTTATAATTTTGCATGTTAATCGAGTAACTGGTGGTCCTGCCCAGAATCCAAATAACAAGAGACTTATAGAAAATTGGAAAAAAAATGGTGTTCTTTATGCTACTCCCCATGGTTCAAATGACGATTGGTACTGGTTATATGCTGCAGTTAGATGTAAATGCTTACTTTTGACAAATGATGAGATGAGGGACCACTTGTTCCAACTTCTGGGCTCTAGTTTTTTCCCAAGATGGAAGGAAAAGCACCAGGTTCGAGTATCAGTCTCAACTCGTGGAGCATCCCTAGTTCTACCTCCTCGTTACTCACTAGTTATTCAGGAATCAGCCAATGGAAGTTGGCATGTGCCAACTGTAGCTAGCGATGATCCTGACATCCCAAGGAAATGGCTATGTGTCACTAGATCTAGAAAAAACTCATTACATAATCTACGAACATCAACCTCCGCGTGTGTTGGCACTTGA
Protein sequence

>Msa0304000

MLLRGTVSMAKLTPLFSILTHRPFLSSNSFSLKHTFNRATLPFTTTTNTLSQTPTSQNNTQSTTNPIKLSTKARRKAAQESPVGILQKKLNNCSKTSDVLQALNLYDQARKAHVPLNLDHYNKLLYLCTVQNGDGSFFHLGLQRGFEIFEQMLRDNVDPNEATFTNAARLAAAKEDPEMAFELLKQMKRVGIAPKLRSYGPALYGFCTRGDAKKAYEVDDDMIESGVMAEEDELCALLEVSVEVKNEDKVYEILHRLRAVVRQVSESTLKVIEDWFESEYAMKIGKREWDDEEIREGFVRGGGGWHGQGWLGSGQWKVVKTNVDEDGMCLSCGEKLVSIDIDPKETENFAASLSKLAREKQPKANFNHFQKWLEKNGPFDAVVDGANVGLANIAEFSFKQLDYAVRQLRQLSPSKRLPLIILHVNRVTGGPAQNPNNKRLIENWKKNGVLYATPHGSNDDWYWLYAAVRCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRVSVSTRGASLVLPPRYSLVIQESANGSWHVPTVASDDPDIPRKWLCVTRSRKNSLHNLRTSTSACVGT*