AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0975080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0975080 MtrunA17_Chr6g0453741 95.782 403 9 2 1 400 1 398 0.0 793
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0975080 AT3G29185.1 71.137 343 96 2 61 400 54 396 0.0 518
Msa0975080 AT3G29185.2 72.378 286 76 2 118 400 49 334 3.76e-152 433

Find 94 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTTCTGTTAGCTCTTA+TGG 0.120996 6_4:-8709441 Msa0975080:CDS
TCATCAAACACTTCAGTTTC+TGG 0.125528 6_4:-8707809 Msa0975080:CDS
AGCAAGAGCCTTTCACATTT+TGG 0.171401 6_4:-8706901 Msa0975080:CDS
TTACACCATTTCTTGGTAAA+TGG 0.177570 6_4:-8706574 Msa0975080:CDS
TCTTCACAATAAGAACTATT+TGG 0.203167 6_4:+8705312 None:intergenic
ACAAATCGAAGTGGTGTCTA+TGG 0.276712 6_4:-8706536 Msa0975080:CDS
GACAATTTAGTCACATTTGA+TGG 0.303591 6_4:-8705549 Msa0975080:CDS
GTTGGTGTTGAAGTTGAAAT+TGG 0.306952 6_4:+8709911 None:intergenic
AATAGGATTACACCATTTCT+TGG 0.307951 6_4:-8706581 Msa0975080:CDS
TCAACCTTAATATCGGAAAA+TGG 0.312890 6_4:-8709749 Msa0975080:CDS
TGACAATGGCCAACTTATTC+AGG 0.316730 6_4:-8706468 Msa0975080:intron
GTATTACGGCAAGGGGTTCT+TGG 0.322878 6_4:-8707521 Msa0975080:CDS
CTCCTCTACTTGACAGTGCT+GGG 0.336473 6_4:-8706818 Msa0975080:CDS
CCTCAATGCAAATGCTTTCT+CGG 0.336795 6_4:+8707571 None:intergenic
AGCTTTCTGTTAGCTCTTAT+GGG 0.337911 6_4:-8709440 Msa0975080:CDS
ATCCATTGATTGAATATGAT+TGG 0.339447 6_4:-8705251 Msa0975080:three_prime_UTR
AGCATTTGATTGTAGAGATA+TGG 0.340359 6_4:+8709850 None:intergenic
CCTCCTCTACTTGACAGTGC+TGG 0.367725 6_4:-8706819 Msa0975080:CDS
AGCATATCAACAGTGCCTTT+TGG 0.374978 6_4:+8706876 None:intergenic
ACAATCAAAATCTTTCCATT+TGG 0.388592 6_4:-8705454 Msa0975080:CDS
ACCAGTCTTTGCCTCTTGTC+AGG 0.390941 6_4:+8705411 None:intergenic
AAGTTGAAATTGGAGAGTTT+TGG 0.403728 6_4:+8709921 None:intergenic
CCTTTCCATTTACCAAGAAA+TGG 0.403825 6_4:+8706569 None:intergenic
ATGTTACAACCAATGTTCAT+TGG 0.412156 6_4:-8705587 Msa0975080:CDS
AGCTTCATCAACCTTAATAT+CGG 0.425986 6_4:-8709756 Msa0975080:CDS
CACGTACGATGTTGAAGGCT+TGG 0.432694 6_4:-8705385 Msa0975080:CDS
CTTGTCAACAGTAAACATAT+TGG 0.435663 6_4:+8707742 None:intergenic
TAATTTCAAAAGTATAGATA+TGG 0.455466 6_4:-8705068 Msa0975080:three_prime_UTR
CTAACCAACAGAACTCCAAA+TGG 0.465800 6_4:+8705439 None:intergenic
AACCAATCATATTCAATCAA+TGG 0.470820 6_4:+8705249 None:intergenic
CATGCCAGGACACAGAGAAT+AGG 0.480971 6_4:-8706598 Msa0975080:intron
CCGAGAAAGCATTTGCATTG+AGG 0.482157 6_4:-8707571 Msa0975080:CDS
ATTACCTGGTGGCATGTACA+TGG 0.483394 6_4:-8705508 Msa0975080:CDS
CTTTCCATTTGGAGTTCTGT+TGG 0.486980 6_4:-8705443 Msa0975080:CDS
TGGTAAATGGAAAGGTCGTT+CGG 0.489631 6_4:-8706561 Msa0975080:CDS
AATGCAAATGCTTTCTCGGA+TGG 0.491967 6_4:+8707575 None:intergenic
TTATTACAACTGATTGAGAC+AGG 0.499361 6_4:+8705137 None:intergenic
ACAACCAATGTTCATTGGAC+TGG 0.500252 6_4:-8705582 Msa0975080:CDS
ATGCAAATGCTTTCTCGGAT+GGG 0.503693 6_4:+8707576 None:intergenic
GTATGTTGGAAACTGTATTA+CGG 0.505191 6_4:-8707535 Msa0975080:CDS
AGAACTATTTGGACACTTGA+GGG 0.506898 6_4:+8705323 None:intergenic
GTTCGCACGTACGATGTTGA+AGG 0.507252 6_4:-8705390 Msa0975080:CDS
GATGTTACTTGTACATCTGA+TGG 0.511525 6_4:-8705615 Msa0975080:CDS
TATCTCTTTGTAAAGAGTAC+AGG 0.511529 6_4:+8706928 None:intergenic
TGTAAAATACCTGAATAAGT+TGG 0.513142 6_4:+8706459 None:intergenic
GAATGAGAAGAATTTGTTGT+TGG 0.513403 6_4:+8709893 None:intergenic
GCATTGAGGTATCAAACAGC+TGG 0.518125 6_4:-8707557 Msa0975080:CDS
AGATGACGATGATGCGGAAT+GGG 0.527733 6_4:-8707786 Msa0975080:CDS
ACCTGACAAGAGGCAAAGAC+TGG 0.527879 6_4:-8705412 Msa0975080:CDS
ATATGGTTTGAATTTGATGA+TGG 0.531550 6_4:+8709867 None:intergenic
ATGTTACTTGTACATCTGAT+GGG 0.537891 6_4:-8705614 Msa0975080:CDS
GAAACTGAAGTGTTTGATGA+AGG 0.538761 6_4:+8707812 None:intergenic
GTATCAAACAGCTGGTATGT+TGG 0.539394 6_4:-8707549 Msa0975080:CDS
TGTAGCAATTTGATGCTGGC+GGG 0.541538 6_4:-8709488 Msa0975080:intron
AACAAGAGAAGGTCGGCGAG+AGG 0.550515 6_4:+8706962 None:intergenic
TTCCTAGAGGAACGAAGTGA+GGG 0.551395 6_4:-8706846 Msa0975080:CDS
CAAATCGAAGTGGTGTCTAT+GGG 0.553037 6_4:-8706535 Msa0975080:CDS
TGGAAACTGTATTACGGCAA+GGG 0.557233 6_4:-8707529 Msa0975080:CDS
ACAAGAGAAGGTCGGCGAGA+GGG 0.557468 6_4:+8706963 None:intergenic
AAGAACTATTTGGACACTTG+AGG 0.558171 6_4:+8705322 None:intergenic
CCATTTCTTGGTAAATGGAA+AGG 0.561343 6_4:-8706569 Msa0975080:CDS
CTTCCTAGAGGAACGAAGTG+AGG 0.575142 6_4:-8706847 Msa0975080:CDS
TATGGTTTGAATTTGATGAT+GGG 0.577627 6_4:+8709868 None:intergenic
TTGGAAACTGTATTACGGCA+AGG 0.578280 6_4:-8707530 Msa0975080:CDS
TATCAGATGATTCTATTACC+TGG 0.580776 6_4:-8705522 Msa0975080:CDS
CATCCCATGTACATGCCACC+AGG 0.581224 6_4:+8705504 None:intergenic
GTTGAGTTGTGTTGCGACAA+TGG 0.583330 6_4:-8709985 Msa0975080:exon
GCTTTCTGTTAGCTCTTATG+GGG 0.591488 6_4:-8709439 Msa0975080:CDS
GAGATGACGATGATGCGGAA+TGG 0.595696 6_4:-8707787 Msa0975080:CDS
GGAAACTGTATTACGGCAAG+GGG 0.596961 6_4:-8707528 Msa0975080:CDS
CTTAATATCGGAAAATGGAA+CGG 0.600042 6_4:-8709744 Msa0975080:CDS
CAATTCTCACAAACAAGAGA+AGG 0.603260 6_4:+8706951 None:intergenic
AATGGATGAAAATTATGCAA+AGG 0.605211 6_4:+8705267 None:intergenic
ACCCCTCACTTCGTTCCTCT+AGG 0.605321 6_4:+8706844 None:intergenic
AATAAAATAAGTAGATGAGA+CGG 0.608181 6_4:+8705362 None:intergenic
TTGTAGCAATTTGATGCTGG+CGG 0.608328 6_4:-8709489 Msa0975080:intron
CCAGCACTGTCAAGTAGAGG+AGG 0.612692 6_4:+8706819 None:intergenic
TTCTGGAGATGACGATGATG+CGG 0.615230 6_4:-8707792 Msa0975080:CDS
GTTCTTGGAGAAGATGACAT+TGG 0.622939 6_4:-8707506 Msa0975080:CDS
AATTTAGTCACATTTGATGG+AGG 0.624019 6_4:-8705546 Msa0975080:CDS
TCCTCTACTTGACAGTGCTG+GGG 0.624603 6_4:-8706817 Msa0975080:intron
AAAGGTAAATGAGTATTACA+TGG 0.634242 6_4:+8705285 None:intergenic
GGTTAGAGACACCTGACAAG+AGG 0.634907 6_4:-8705422 Msa0975080:CDS
ACCCCAGCACTGTCAAGTAG+AGG 0.643774 6_4:+8706816 None:intergenic
TATGCTTATCATCTTCCTAG+AGG 0.644237 6_4:-8706859 Msa0975080:CDS
TCTCACAAACAAGAGAAGGT+CGG 0.653517 6_4:+8706955 None:intergenic
TGTGCCAGTCCAATGAACAT+TGG 0.660969 6_4:+8705578 None:intergenic
TGTTACTTGTACATCTGATG+GGG 0.667390 6_4:-8705613 Msa0975080:CDS
TTACCTGGTGGCATGTACAT+GGG 0.668069 6_4:-8705507 Msa0975080:CDS
CAGATGATTCTATTACCTGG+TGG 0.669336 6_4:-8705519 Msa0975080:CDS
TCCTAGAGGAACGAAGTGAG+GGG 0.678973 6_4:-8706845 Msa0975080:CDS
CGTTCGGTTACAAATCGAAG+TGG 0.679346 6_4:-8706545 Msa0975080:CDS
ACATTGGTGAAGAATCACCT+AGG 0.705045 6_4:-8707490 Msa0975080:intron
TTACATGAGATGAATGACAA+TGG 0.736609 6_4:-8706482 Msa0975080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAACAAATATTGAAA+TGG + chr6_4:8705406-8705425 None:intergenic 15.0%
!! ATTATATGTAATCATAGTAT+CGG + chr6_4:8705506-8705525 None:intergenic 15.0%
!!! TAAAATTTTAGTCAAATGTA+AGG - chr6_4:8706101-8706120 Msa0975080:intron 15.0%
!!! ACAATTGATTTATAAAGAAA+AGG + chr6_4:8706680-8706699 None:intergenic 15.0%
!!! ATTTAACTTTTTAAGCAATT+TGG + chr6_4:8707143-8707162 None:intergenic 15.0%
!! AAATTGCTTAAAAAGTTAAA+TGG - chr6_4:8707142-8707161 Msa0975080:intron 15.0%
!! AAATCATCAAAAAAAGAATA+TGG + chr6_4:8707433-8707452 None:intergenic 15.0%
!! CACAAATAAATAACTAAATA+TGG + chr6_4:8708406-8708425 None:intergenic 15.0%
!! ATTTAGTTATTTATTTGTGT+AGG - chr6_4:8708407-8708426 Msa0975080:intron 15.0%
!! AAATTAAAACAGTTAAACAA+AGG + chr6_4:8708777-8708796 None:intergenic 15.0%
!!! TTGTTTAACTGTTTTAATTT+TGG - chr6_4:8708777-8708796 Msa0975080:intron 15.0%
!! TTCAAATGTATATGATTTAT+AGG + chr6_4:8709024-8709043 None:intergenic 15.0%
!! GTTAATACAGTTTAAATATA+TGG + chr6_4:8709200-8709219 None:intergenic 15.0%
!!! TAATTTCAAAAGTATAGATA+TGG - chr6_4:8710033-8710052 Msa0975080:five_prime_UTR 15.0%
!!! TTCAAATCATTTTCAAACAA+TGG + chr6_4:8706207-8706226 None:intergenic 20.0%
!!! TGTTAGTTTAACTAAAACTT+AGG - chr6_4:8706312-8706331 Msa0975080:intron 20.0%
!!! GTTAGTTTAACTAAAACTTA+GGG - chr6_4:8706313-8706332 Msa0975080:intron 20.0%
!! AATTACAATTAAAGATTGTG+AGG + chr6_4:8706547-8706566 None:intergenic 20.0%
!!! TAATGATCTGAAACTAAAAT+AGG + chr6_4:8706611-8706630 None:intergenic 20.0%
!!! TATTTTAGTTTCAGATCATT+AGG - chr6_4:8706610-8706629 Msa0975080:intron 20.0%
!! AAATCAATTGTTGAAAAAGA+AGG - chr6_4:8706689-8706708 Msa0975080:intron 20.0%
!!! TTAAACCACATGTTTTAAAA+TGG + chr6_4:8706952-8706971 None:intergenic 20.0%
!!! TTCTTTTTTTGATGATTTCT+TGG - chr6_4:8707435-8707454 Msa0975080:intron 20.0%
!! TATGCATATTAAATGTTTGT+AGG + chr6_4:8707716-8707735 None:intergenic 20.0%
!!! ACTTTTTTATCAGAACATTT+TGG - chr6_4:8707806-8707825 Msa0975080:CDS 20.0%
!! AAATTGTGAAAATAAGTCTA+AGG + chr6_4:8708093-8708112 None:intergenic 20.0%
!!! CTTATTTTCACAATTTCTTA+TGG - chr6_4:8708097-8708116 Msa0975080:intron 20.0%
!! ACTGCATTAAAAACATAATA+AGG + chr6_4:8708807-8708826 None:intergenic 20.0%
!!! TATTTGTTGAACATACTATA+CGG + chr6_4:8708863-8708882 None:intergenic 20.0%
!! AAGTTTATAACAGAAAATTG+TGG + chr6_4:8708996-8709015 None:intergenic 20.0%
!!! AATGTAATTAACCACATTTT+TGG + chr6_4:8709112-8709131 None:intergenic 20.0%
!! AAAATGTGGTTAATTACATT+CGG - chr6_4:8709112-8709131 Msa0975080:intron 20.0%
!!! AGCATTATATATCTTCATTT+TGG - chr6_4:8709254-8709273 Msa0975080:intron 20.0%
!! AATAAAATAAGTAGATGAGA+CGG + chr6_4:8709742-8709761 None:intergenic 20.0%
!! AATCAGTTGTAATAAAAAGA+TGG - chr6_4:8709972-8709991 Msa0975080:exon 20.0%
!! TATGGTTTGAATTTGATGAT+GGG + chr6_4:8705236-8705255 None:intergenic 25.0%
! ATATGGTTTGAATTTGATGA+TGG + chr6_4:8705237-8705256 None:intergenic 25.0%
! TTTGCTTAAACAAACAAACA+AGG - chr6_4:8705761-8705780 Msa0975080:intron 25.0%
! TTGCTTAAACAAACAAACAA+GGG - chr6_4:8705762-8705781 Msa0975080:intron 25.0%
! TACAATACACAAAAAATGGT+GGG - chr6_4:8705849-8705868 Msa0975080:intron 25.0%
!! TTACACAAGATGATGTTTTT+AGG + chr6_4:8705990-8706009 None:intergenic 25.0%
! ATCATCTTGTGTAAAAAACA+TGG - chr6_4:8705996-8706015 Msa0975080:intron 25.0%
! TAATAACAAAATAGCAAACC+AGG - chr6_4:8706767-8706786 Msa0975080:intron 25.0%
! TAATAGCTATCTTGGATATA+AGG + chr6_4:8706815-8706834 None:intergenic 25.0%
! TCCAAGATAGCTATTATTAA+TGG - chr6_4:8706819-8706838 Msa0975080:CDS 25.0%
! ACCATTAATAATAGCTATCT+TGG + chr6_4:8706823-8706842 None:intergenic 25.0%
!! AAAAGTTCTAATCTCATGAT+TGG + chr6_4:8706900-8706919 None:intergenic 25.0%
!! ATGAGATTAGAACTTTTAGA+TGG - chr6_4:8706903-8706922 Msa0975080:CDS 25.0%
!!! TTCTACCATTTTAAAACATG+TGG - chr6_4:8706944-8706963 Msa0975080:CDS 25.0%
! TATCTGCAAACTAATTGTAA+TGG + chr6_4:8707497-8707516 None:intergenic 25.0%
!!! ATTACAATTAGTTTGCAGAT+AGG - chr6_4:8707496-8707515 Msa0975080:CDS 25.0%
!! TGTTTGGTTGATTTCTATTT+AGG - chr6_4:8707670-8707689 Msa0975080:intron 25.0%
! CAAACATTTAATATGCATAG+CGG - chr6_4:8707717-8707736 Msa0975080:intron 25.0%
! AAACATTTAATATGCATAGC+GGG - chr6_4:8707718-8707737 Msa0975080:intron 25.0%
! TGGCATGAATTAAAAATGAA+TGG + chr6_4:8708490-8708509 None:intergenic 25.0%
!!! ATTCATTTTTAATTCATGCC+AGG - chr6_4:8708489-8708508 Msa0975080:intron 25.0%
! TGTAAAATACCTGAATAAGT+TGG + chr6_4:8708645-8708664 None:intergenic 25.0%
! TAGTATGTTCAACAAATACA+TGG - chr6_4:8708865-8708884 Msa0975080:intron 25.0%
! CATATACATTTGAACACATT+TGG - chr6_4:8709030-8709049 Msa0975080:intron 25.0%
!!! TAATTAACCACATTTTTGGA+TGG + chr6_4:8709108-8709127 None:intergenic 25.0%
! ATATGGCTAATTATGTTCAA+TGG + chr6_4:8709183-8709202 None:intergenic 25.0%
!!! ATATATCTTCATTTTGGAGT+TGG - chr6_4:8709260-8709279 Msa0975080:intron 25.0%
! ACACAATATATGAAGCTAAA+GGG + chr6_4:8709405-8709424 None:intergenic 25.0%
! TACACAATATATGAAGCTAA+AGG + chr6_4:8709406-8709425 None:intergenic 25.0%
! ACAATCAAAATCTTTCCATT+TGG - chr6_4:8709647-8709666 Msa0975080:intron 25.0%
! TCTTCACAATAAGAACTATT+TGG + chr6_4:8709792-8709811 None:intergenic 25.0%
! AAAGGTAAATGAGTATTACA+TGG + chr6_4:8709819-8709838 None:intergenic 25.0%
! AATGGATGAAAATTATGCAA+AGG + chr6_4:8709837-8709856 None:intergenic 25.0%
!! ATCCATTGATTGAATATGAT+TGG - chr6_4:8709850-8709869 Msa0975080:CDS 25.0%
! AACCAATCATATTCAATCAA+TGG + chr6_4:8709855-8709874 None:intergenic 25.0%
!! CTTTTCATGTGATATAGTTT+AGG - chr6_4:8709891-8709910 Msa0975080:CDS 25.0%
! AATAAAAGTGAGCTTTTGAG+TGG - chr6_4:8705071-8705090 Msa0975080:three_prime_UTR 30.0%
! AAGTTGAAATTGGAGAGTTT+TGG + chr6_4:8705183-8705202 None:intergenic 30.0%
!! GAATGAGAAGAATTTGTTGT+TGG + chr6_4:8705211-8705230 None:intergenic 30.0%
AGCATTTGATTGTAGAGATA+TGG + chr6_4:8705254-8705273 None:intergenic 30.0%
AGCTTCATCAACCTTAATAT+CGG - chr6_4:8705345-8705364 Msa0975080:exon 30.0%
TCAACCTTAATATCGGAAAA+TGG - chr6_4:8705352-8705371 Msa0975080:CDS 30.0%
CTTAATATCGGAAAATGGAA+CGG - chr6_4:8705357-8705376 Msa0975080:CDS 30.0%
! TTCTCTTGTTTATTGCTTTG+TGG - chr6_4:8705432-8705451 Msa0975080:CDS 30.0%
! TTTTTGTAGCAATTTGATGC+TGG - chr6_4:8705609-8705628 Msa0975080:CDS 30.0%
TAAACAAACAAACAAGGGTA+AGG - chr6_4:8705767-8705786 Msa0975080:intron 30.0%
TGCGTACAATACACAAAAAA+TGG - chr6_4:8705845-8705864 Msa0975080:intron 30.0%
GTACAATACACAAAAAATGG+TGG - chr6_4:8705848-8705867 Msa0975080:intron 30.0%
TTGTTTGTTTGTTTAAGCGA+GGG + chr6_4:8705923-8705942 None:intergenic 30.0%
TAAACAAACAAACAAGAGCA+AGG - chr6_4:8705928-8705947 Msa0975080:intron 30.0%
CTTGTGTAAAAAACATGGTA+AGG - chr6_4:8706001-8706020 Msa0975080:intron 30.0%
TAGAGTACACTAAAAATGGT+GGG - chr6_4:8706029-8706048 Msa0975080:intron 30.0%
! TTTTAAGCAAACACAGATGA+GGG + chr6_4:8706086-8706105 None:intergenic 30.0%
! ATTTTAAGCAAACACAGATG+AGG + chr6_4:8706087-8706106 None:intergenic 30.0%
! CACTAATCTAGCAGATTTTA+AGG - chr6_4:8706150-8706169 Msa0975080:intron 30.0%
TCACTTTGATAAATCGTCTA+CGG - chr6_4:8706177-8706196 Msa0975080:intron 30.0%
AGATTGTGAGGCAAATTTAA+TGG + chr6_4:8706535-8706554 None:intergenic 30.0%
TAATGGTGTGATCTATTGTA+AGG - chr6_4:8706836-8706855 Msa0975080:CDS 30.0%
! ACTTTTAGATGGAGATTAGA+CGG - chr6_4:8706914-8706933 Msa0975080:CDS 30.0%
AATTAACACAATCAAGAGCT+TGG + chr6_4:8707006-8707025 None:intergenic 30.0%
GTATGCTTTGTAAGTGTTTA+AGG - chr6_4:8707166-8707185 Msa0975080:intron 30.0%
TAAGATAAGATGCCACAAAT+TGG + chr6_4:8707192-8707211 None:intergenic 30.0%
CTTGTCAACAGTAAACATAT+TGG + chr6_4:8707362-8707381 None:intergenic 30.0%
TGGATATTTGAAAGATGCAT+TGG + chr6_4:8707477-8707496 None:intergenic 30.0%
GTATGTTGGAAACTGTATTA+CGG - chr6_4:8707566-8707585 Msa0975080:CDS 30.0%
! AGTGCTAATTGAACTCTTTT+CGG + chr6_4:8707651-8707670 None:intergenic 30.0%
GGTCAATTTCTTGCATAAAA+AGG + chr6_4:8707852-8707871 None:intergenic 30.0%
! AAACCTCTTCATTTTAGACT+CGG - chr6_4:8707988-8708007 Msa0975080:intron 30.0%
TGAACTACCCTGTAAATAAA+AGG - chr6_4:8708041-8708060 Msa0975080:intron 30.0%
TGTGAAAATAAGTCTAAGGA+AGG + chr6_4:8708089-8708108 None:intergenic 30.0%
! TATCTCTTTGTAAAGAGTAC+AGG + chr6_4:8708176-8708195 None:intergenic 30.0%
AATAGGATTACACCATTTCT+TGG - chr6_4:8708520-8708539 Msa0975080:intron 30.0%
TTACACCATTTCTTGGTAAA+TGG - chr6_4:8708527-8708546 Msa0975080:intron 30.0%
TTACATGAGATGAATGACAA+TGG - chr6_4:8708619-8708638 Msa0975080:intron 30.0%
GTTAATGACGTTCAAAATTG+GGG + chr6_4:8708974-8708993 None:intergenic 30.0%
GGTTAATGACGTTCAAAATT+GGG + chr6_4:8708975-8708994 None:intergenic 30.0%
TGGTTAATGACGTTCAAAAT+TGG + chr6_4:8708976-8708995 None:intergenic 30.0%
ATACATTTGAACACATTTGG+AGG - chr6_4:8709033-8709052 Msa0975080:intron 30.0%
TACATTTGAACACATTTGGA+GGG - chr6_4:8709034-8709053 Msa0975080:intron 30.0%
TTCAAACTCCTGAAAAATTG+TGG - chr6_4:8709076-8709095 Msa0975080:intron 30.0%
ATTAACCATCAAAATTGCTG+TGG - chr6_4:8709214-8709233 Msa0975080:intron 30.0%
! AATTTCCACAGCAATTTTGA+TGG + chr6_4:8709222-8709241 None:intergenic 30.0%
TATACCAACTGAACACAAAA+GGG + chr6_4:8709318-8709337 None:intergenic 30.0%
ATATACCAACTGAACACAAA+AGG + chr6_4:8709319-8709338 None:intergenic 30.0%
! CAACAAAAACTTTGAGAAAG+TGG + chr6_4:8709443-8709462 None:intergenic 30.0%
! ATGTTACTTGTACATCTGAT+GGG - chr6_4:8709487-8709506 Msa0975080:intron 30.0%
ATGTTACAACCAATGTTCAT+TGG - chr6_4:8709514-8709533 Msa0975080:intron 30.0%
GACAATTTAGTCACATTTGA+TGG - chr6_4:8709552-8709571 Msa0975080:intron 30.0%
AATTTAGTCACATTTGATGG+AGG - chr6_4:8709555-8709574 Msa0975080:intron 30.0%
TATCAGATGATTCTATTACC+TGG - chr6_4:8709579-8709598 Msa0975080:intron 30.0%
TTATTACAACTGATTGAGAC+AGG + chr6_4:8709967-8709986 None:intergenic 30.0%
!! GTTGGTGTTGAAGTTGAAAT+TGG + chr6_4:8705193-8705212 None:intergenic 35.0%
! CGTTCCATTTTCCGATATTA+AGG + chr6_4:8705359-8705378 None:intergenic 35.0%
! AAGCTTTCTGTTAGCTCTTA+TGG - chr6_4:8705660-8705679 Msa0975080:intron 35.0%
! AGCTTTCTGTTAGCTCTTAT+GGG - chr6_4:8705661-8705680 Msa0975080:intron 35.0%
AAATTCAAGTCCTCGAAACA+AGG - chr6_4:8705816-8705835 Msa0975080:intron 35.0%
CTTGTTTGTTTGTTTAAGCG+AGG + chr6_4:8705924-8705943 None:intergenic 35.0%
TGCGTAGAGTACACTAAAAA+TGG - chr6_4:8706025-8706044 Msa0975080:intron 35.0%
GTAGAGTACACTAAAAATGG+TGG - chr6_4:8706028-8706047 Msa0975080:intron 35.0%
TTTGATAAATCGTCTACGGT+GGG - chr6_4:8706181-8706200 Msa0975080:intron 35.0%
AGTTGTTCTAATGAGTGAGA+TGG - chr6_4:8706277-8706296 Msa0975080:intron 35.0%
GACAGTGACTTGATTGATAT+GGG + chr6_4:8706391-8706410 None:intergenic 35.0%
AGACAGTGACTTGATTGATA+TGG + chr6_4:8706392-8706411 None:intergenic 35.0%
AAACACATGCTAAGAGAAAG+TGG - chr6_4:8706635-8706654 Msa0975080:intron 35.0%
CTATCTTGGATATAAGGAAC+TGG + chr6_4:8706809-8706828 None:intergenic 35.0%
GGATTCTTATTCAAGCAGAA+CGG - chr6_4:8707047-8707066 Msa0975080:intron 35.0%
! AAGTGTTTAAGGCCAATTTG+TGG - chr6_4:8707177-8707196 Msa0975080:intron 35.0%
!! GCATCTTATCTTACTTTTCG+TGG - chr6_4:8707199-8707218 Msa0975080:intron 35.0%
! GAAACTGAAGTGTTTGATGA+AGG + chr6_4:8707292-8707311 None:intergenic 35.0%
TCATCAAACACTTCAGTTTC+TGG - chr6_4:8707292-8707311 Msa0975080:intron 35.0%
CAGAATAAAGTCTCACTTGT+TGG + chr6_4:8707387-8707406 None:intergenic 35.0%
! GTGCTAATTGAACTCTTTTC+GGG + chr6_4:8707650-8707669 None:intergenic 35.0%
AGAGTTCAATTAGCACTGTT+TGG - chr6_4:8707654-8707673 Msa0975080:intron 35.0%
! GTCATCTAAAATGAAGAGCT+TGG + chr6_4:8707894-8707913 None:intergenic 35.0%
TATGACATGTAAGACTCGTT+TGG - chr6_4:8707946-8707965 Msa0975080:intron 35.0%
! AACCTCTTCATTTTAGACTC+GGG - chr6_4:8707989-8708008 Msa0975080:intron 35.0%
CAATTCTCACAAACAAGAGA+AGG + chr6_4:8708153-8708172 None:intergenic 35.0%
!!! TTTTGGCTCCAAAATGTGAA+AGG + chr6_4:8708211-8708230 None:intergenic 35.0%
!!! TTTCACATTTTGGAGCCAAA+AGG - chr6_4:8708210-8708229 Msa0975080:intron 35.0%
TATGCTTATCATCTTCCTAG+AGG - chr6_4:8708242-8708261 Msa0975080:intron 35.0%
CCTTTCCATTTACCAAGAAA+TGG + chr6_4:8708535-8708554 None:intergenic 35.0%
CCATTTCTTGGTAAATGGAA+AGG - chr6_4:8708532-8708551 Msa0975080:intron 35.0%
GGTAAATTGTGTTCAGTTGA+TGG + chr6_4:8708953-8708972 None:intergenic 35.0%
! GGCATTAACCACAATTTTTC+AGG + chr6_4:8709087-8709106 None:intergenic 35.0%
GTTAATGCCATCCAAAAATG+TGG - chr6_4:8709098-8709117 Msa0975080:intron 35.0%
ATGTGGTTAATTACATTCGG+TGG - chr6_4:8709115-8709134 Msa0975080:intron 35.0%
TATATGAAGCTAAAGGGAGA+GGG + chr6_4:8709399-8709418 None:intergenic 35.0%
ATATATGAAGCTAAAGGGAG+AGG + chr6_4:8709400-8709419 None:intergenic 35.0%
!! TTTGTTGTTGATTCTGCTTC+TGG - chr6_4:8709456-8709475 Msa0975080:CDS 35.0%
! GATGTTACTTGTACATCTGA+TGG - chr6_4:8709486-8709505 Msa0975080:CDS 35.0%
! TGTTACTTGTACATCTGATG+GGG - chr6_4:8709488-8709507 Msa0975080:intron 35.0%
!! ACACTTTTTGCTACATCACA+AGG + chr6_4:8709624-8709643 None:intergenic 35.0%
TTGTGATGTAGCAAAAAGTG+TGG - chr6_4:8709623-8709642 Msa0975080:intron 35.0%
AGAACTATTTGGACACTTGA+GGG + chr6_4:8709781-8709800 None:intergenic 35.0%
AAGAACTATTTGGACACTTG+AGG + chr6_4:8709782-8709801 None:intergenic 35.0%
!! AGTGAGCTTTTGAGTGGATA+AGG - chr6_4:8705077-8705096 Msa0975080:three_prime_UTR 40.0%
!!! GAGAGTTTTGGAAGTGATGA+AGG + chr6_4:8705171-8705190 None:intergenic 40.0%
!! TCATAGTATCGGTGTCATGT+TGG + chr6_4:8705495-8705514 None:intergenic 40.0%
TGAGTGCTTCGTTATTGAGA+GGG - chr6_4:8705564-8705583 Msa0975080:CDS 40.0%
TTGTAGCAATTTGATGCTGG+CGG - chr6_4:8705612-8705631 Msa0975080:CDS 40.0%
! GCTTTCTGTTAGCTCTTATG+GGG - chr6_4:8705662-8705681 Msa0975080:intron 40.0%
CTTTGATAAATCGTCTACGG+TGG - chr6_4:8706180-8706199 Msa0975080:intron 40.0%
! GGGACAACATTGGTTATCAT+TGG + chr6_4:8706233-8706252 None:intergenic 40.0%
TGATAACCAATGTTGTCCCT+TGG - chr6_4:8706234-8706253 Msa0975080:intron 40.0%
CTGTGAGTTTCTACTTCCAA+GGG + chr6_4:8706253-8706272 None:intergenic 40.0%
ACTGTGAGTTTCTACTTCCA+AGG + chr6_4:8706254-8706273 None:intergenic 40.0%
AGGGTAATGAGTGTAAGTTG+AGG - chr6_4:8706332-8706351 Msa0975080:intron 40.0%
GTTGTCTAATCTCCATCCAA+AGG - chr6_4:8706978-8706997 Msa0975080:CDS 40.0%
AATCAAGAGCTTGGAACCTT+TGG + chr6_4:8706997-8707016 None:intergenic 40.0%
TGTTTAATGTACAGCCTGCA+GGG + chr6_4:8707268-8707287 None:intergenic 40.0%
TTGTTTAATGTACAGCCTGC+AGG + chr6_4:8707269-8707288 None:intergenic 40.0%
GTGAGACTTTATTCTGTTGC+TGG - chr6_4:8707391-8707410 Msa0975080:intron 40.0%
ATGCAAATGCTTTCTCGGAT+GGG + chr6_4:8707528-8707547 None:intergenic 40.0%
AATGCAAATGCTTTCTCGGA+TGG + chr6_4:8707529-8707548 None:intergenic 40.0%
CCTCAATGCAAATGCTTTCT+CGG + chr6_4:8707533-8707552 None:intergenic 40.0%
GTATCAAACAGCTGGTATGT+TGG - chr6_4:8707552-8707571 Msa0975080:CDS 40.0%
TTGGAAACTGTATTACGGCA+AGG - chr6_4:8707571-8707590 Msa0975080:CDS 40.0%
TGGAAACTGTATTACGGCAA+GGG - chr6_4:8707572-8707591 Msa0975080:CDS 40.0%
GTTCTTGGAGAAGATGACAT+TGG - chr6_4:8707595-8707614 Msa0975080:intron 40.0%
ACATTGGTGAAGAATCACCT+AGG - chr6_4:8707611-8707630 Msa0975080:intron 40.0%
! CATTTAATATGCATAGCGGG+TGG - chr6_4:8707721-8707740 Msa0975080:intron 40.0%
! AACCCGAGTCTAAAATGAAG+AGG + chr6_4:8707994-8708013 None:intergenic 40.0%
!! GTGTGCGCCTTTTATTTACA+GGG + chr6_4:8708051-8708070 None:intergenic 40.0%
!! TGTGTGCGCCTTTTATTTAC+AGG + chr6_4:8708052-8708071 None:intergenic 40.0%
TCTCACAAACAAGAGAAGGT+CGG + chr6_4:8708149-8708168 None:intergenic 40.0%
! AGCAAGAGCCTTTCACATTT+TGG - chr6_4:8708200-8708219 Msa0975080:intron 40.0%
! AGCATATCAACAGTGCCTTT+TGG + chr6_4:8708228-8708247 None:intergenic 40.0%
TAATCCTATTCTCTGTGTCC+TGG + chr6_4:8708510-8708529 None:intergenic 40.0%
TGGTAAATGGAAAGGTCGTT+CGG - chr6_4:8708540-8708559 Msa0975080:intron 40.0%
ACAAATCGAAGTGGTGTCTA+TGG - chr6_4:8708565-8708584 Msa0975080:intron 40.0%
CAAATCGAAGTGGTGTCTAT+GGG - chr6_4:8708566-8708585 Msa0975080:intron 40.0%
TGACAATGGCCAACTTATTC+AGG - chr6_4:8708633-8708652 Msa0975080:intron 40.0%
ACGCAGCAGTAAGAGTTATT+AGG + chr6_4:8708669-8708688 None:intergenic 40.0%
AATAACTCTTACTGCTGCGT+AGG - chr6_4:8708669-8708688 Msa0975080:intron 40.0%
TAGTACTAGACCAACTATCG+AGG + chr6_4:8708834-8708853 None:intergenic 40.0%
! TGATTCTGCTTCTGGAAATC+AGG - chr6_4:8709464-8709483 Msa0975080:CDS 40.0%
ACAACCAATGTTCATTGGAC+TGG - chr6_4:8709519-8709538 Msa0975080:intron 40.0%
CAGATGATTCTATTACCTGG+TGG - chr6_4:8709582-8709601 Msa0975080:intron 40.0%
! CTTTCCATTTGGAGTTCTGT+TGG - chr6_4:8709658-8709677 Msa0975080:intron 40.0%
CTAACCAACAGAACTCCAAA+TGG + chr6_4:8709665-8709684 None:intergenic 40.0%
! GTTGAGTTGTGTTGCGACAA+TGG - chr6_4:8705116-8705135 Msa0975080:three_prime_UTR 45.0%
!! TATCGGTGTCATGTTGGTGT+CGG + chr6_4:8705489-8705508 None:intergenic 45.0%
GTGAGTGCTTCGTTATTGAG+AGG - chr6_4:8705563-8705582 Msa0975080:CDS 45.0%
TGTAGCAATTTGATGCTGGC+GGG - chr6_4:8705613-8705632 Msa0975080:CDS 45.0%
GATGTTGTCACGTGACTGAA+CGG - chr6_4:8705789-8705808 Msa0975080:intron 45.0%
! CGCAACTTTACCTTGTTTCG+AGG + chr6_4:8705829-8705848 None:intergenic 45.0%
CTCATGCATACACAGTTTCC+GGG + chr6_4:8705882-8705901 None:intergenic 45.0%
GCTCATGCATACACAGTTTC+CGG + chr6_4:8705883-8705902 None:intergenic 45.0%
GTCACGTGACTGAAATGTCA+CGG - chr6_4:8705956-8705975 Msa0975080:intron 45.0%
TCACGTGACTGAAATGTCAC+GGG - chr6_4:8705957-8705976 Msa0975080:intron 45.0%
CTACTTCCAAGGGACAACAT+TGG + chr6_4:8706243-8706262 None:intergenic 45.0%
AAGTCACTGTCTCACTCACA+AGG - chr6_4:8706400-8706419 Msa0975080:intron 45.0%
CTTTGACAGGTGGTTCGATA+TGG + chr6_4:8706505-8706524 None:intergenic 45.0%
TATCGAACCACCTGTCAAAG+TGG - chr6_4:8706505-8706524 Msa0975080:CDS 45.0%
TAATGGTGCACCACTTTGAC+AGG + chr6_4:8706518-8706537 None:intergenic 45.0%
AAGAGCTTGGAACCTTTGGA+TGG + chr6_4:8706993-8707012 None:intergenic 45.0%
! TTCTGGAGATGACGATGATG+CGG - chr6_4:8707309-8707328 Msa0975080:intron 45.0%
AGATGACGATGATGCGGAAT+GGG - chr6_4:8707315-8707334 Msa0975080:intron 45.0%
!! CCGAGAAAGCATTTGCATTG+AGG - chr6_4:8707530-8707549 Msa0975080:CDS 45.0%
! GCATTGAGGTATCAAACAGC+TGG - chr6_4:8707544-8707563 Msa0975080:CDS 45.0%
GGAAACTGTATTACGGCAAG+GGG - chr6_4:8707573-8707592 Msa0975080:CDS 45.0%
! TAGCGGGTGGAAATAGTTAC+AGG - chr6_4:8707734-8707753 Msa0975080:CDS 45.0%
AGCAAGTTCTGTCTACACGA+TGG + chr6_4:8707783-8707802 None:intergenic 45.0%
GACATGTAAGACTCGTTTGG+TGG - chr6_4:8707949-8707968 Msa0975080:intron 45.0%
! ACTCGTTTGGTGGACAGAAT+AGG - chr6_4:8707959-8707978 Msa0975080:intron 45.0%
TTCCTAGAGGAACGAAGTGA+GGG - chr6_4:8708255-8708274 Msa0975080:intron 45.0%
TGTGTGCGAAAATCAGCAGT+AGG + chr6_4:8708362-8708381 None:intergenic 45.0%
!!! TGCTGATTTTCGCACACACA+CGG - chr6_4:8708364-8708383 Msa0975080:intron 45.0%
CGTTCGGTTACAAATCGAAG+TGG - chr6_4:8708556-8708575 Msa0975080:intron 45.0%
TTACTGCTGCGTAGGTATAC+TGG - chr6_4:8708677-8708696 Msa0975080:intron 45.0%
! TGCAGTTTTGCCTCGATAGT+TGG - chr6_4:8708821-8708840 Msa0975080:intron 45.0%
ACATGGCTAATGACTTTCGC+TGG - chr6_4:8708882-8708901 Msa0975080:intron 45.0%
! TCCACCCTTTTGTGTTCAGT+TGG - chr6_4:8709311-8709330 Msa0975080:intron 45.0%
ACCAACTGAACACAAAAGGG+TGG + chr6_4:8709315-8709334 None:intergenic 45.0%
TGTGCCAGTCCAATGAACAT+TGG + chr6_4:8709526-8709545 None:intergenic 45.0%
ATTACCTGGTGGCATGTACA+TGG - chr6_4:8709593-8709612 Msa0975080:intron 45.0%
TTACCTGGTGGCATGTACAT+GGG - chr6_4:8709594-8709613 Msa0975080:intron 45.0%
TGTGGCACTCTTCTGATCCA+AGG - chr6_4:8705450-8705469 Msa0975080:CDS 50.0%
AGCACTCACACTGACAACAC+TGG + chr6_4:8705552-8705571 None:intergenic 50.0%
GTGCTTCGTTATTGAGAGGG+AGG - chr6_4:8705567-8705586 Msa0975080:CDS 50.0%
! AAAATGGTGGGACACCTTCC+CGG - chr6_4:8705861-8705880 Msa0975080:intron 50.0%
TGCATACACAGTTTCCGGGA+AGG + chr6_4:8705878-8705897 None:intergenic 50.0%
! CTGCAAGAGCTTTAGTGCAC+CGG - chr6_4:8706056-8706075 Msa0975080:intron 50.0%
! TGCAAGAGCTTTAGTGCACC+GGG - chr6_4:8706057-8706076 Msa0975080:intron 50.0%
TCTACTTCCAGCCAGTACCA+CGG - chr6_4:8706442-8706461 Msa0975080:intron 50.0%
TGAAACTCAATGACGACCCG+TGG + chr6_4:8706462-8706481 None:intergenic 50.0%
GGCGAAATTTCAGATGCACC+TGG + chr6_4:8706788-8706807 None:intergenic 50.0%
GTAAGGATTCAGACTGCCTG+TGG - chr6_4:8706853-8706872 Msa0975080:CDS 50.0%
GTGAATGCTTTACCGACCAC+AGG + chr6_4:8706872-8706891 None:intergenic 50.0%
GTACAGATGTTGTTCCCTGC+AGG - chr6_4:8707251-8707270 Msa0975080:intron 50.0%
GAGATGACGATGATGCGGAA+TGG - chr6_4:8707314-8707333 Msa0975080:intron 50.0%
GTATTACGGCAAGGGGTTCT+TGG - chr6_4:8707580-8707599 Msa0975080:CDS 50.0%
CGGGAACGAATCACTTACCT+AGG + chr6_4:8707631-8707650 None:intergenic 50.0%
CTTCCTAGAGGAACGAAGTG+AGG - chr6_4:8708254-8708273 Msa0975080:intron 50.0%
TCCTAGAGGAACGAAGTGAG+GGG - chr6_4:8708256-8708275 Msa0975080:intron 50.0%
CTCCTCTACTTGACAGTGCT+GGG - chr6_4:8708283-8708302 Msa0975080:intron 50.0%
TCCTCTACTTGACAGTGCTG+GGG - chr6_4:8708284-8708303 Msa0975080:intron 50.0%
!! GCTGATTTTCGCACACACAC+GGG - chr6_4:8708365-8708384 Msa0975080:intron 50.0%
CATGCCAGGACACAGAGAAT+AGG - chr6_4:8708503-8708522 Msa0975080:intron 50.0%
TGGGTGGAGAGAAGATTGTG+TGG + chr6_4:8709286-8709305 None:intergenic 50.0%
CACAAAAGGGTGGAGCGAAT+GGG + chr6_4:8709305-8709324 None:intergenic 50.0%
ACACAAAAGGGTGGAGCGAA+TGG + chr6_4:8709306-8709325 None:intergenic 50.0%
GGTTAGAGACACCTGACAAG+AGG - chr6_4:8709679-8709698 Msa0975080:intron 50.0%
ACCTGACAAGAGGCAAAGAC+TGG - chr6_4:8709689-8709708 Msa0975080:intron 50.0%
ACCAGTCTTTGCCTCTTGTC+AGG + chr6_4:8709693-8709712 None:intergenic 50.0%
GTTCGCACGTACGATGTTGA+AGG - chr6_4:8709711-8709730 Msa0975080:intron 50.0%
CACGTACGATGTTGAAGGCT+TGG - chr6_4:8709716-8709735 Msa0975080:intron 50.0%
CGGTGCACTAAAGCTCTTGC+AGG + chr6_4:8706058-8706077 None:intergenic 55.0%
AAACACAGATGAGGGCAGCC+CGG + chr6_4:8706078-8706097 None:intergenic 55.0%
TCTCACTCACAAGGACGACG+AGG - chr6_4:8706409-8706428 Msa0975080:intron 55.0%
CTCACTCACAAGGACGACGA+GGG - chr6_4:8706410-8706429 Msa0975080:intron 55.0%
CTACTTCCAGCCAGTACCAC+GGG - chr6_4:8706443-8706462 Msa0975080:intron 55.0%
TCAATGACGACCCGTGGTAC+TGG + chr6_4:8706456-8706475 None:intergenic 55.0%
TGGTGCACCACTTTGACAGG+TGG + chr6_4:8706515-8706534 None:intergenic 55.0%
GGATTCAGACTGCCTGTGGT+CGG - chr6_4:8706857-8706876 Msa0975080:CDS 55.0%
GTGTGCTTTCGAGACTGCAG+AGG - chr6_4:8707026-8707045 Msa0975080:intron 55.0%
ACAAGAGAAGGTCGGCGAGA+GGG + chr6_4:8708141-8708160 None:intergenic 55.0%
AACAAGAGAAGGTCGGCGAG+AGG + chr6_4:8708142-8708161 None:intergenic 55.0%
ACCCCTCACTTCGTTCCTCT+AGG + chr6_4:8708260-8708279 None:intergenic 55.0%
CCAGCACTGTCAAGTAGAGG+AGG + chr6_4:8708285-8708304 None:intergenic 55.0%
CCTCCTCTACTTGACAGTGC+TGG - chr6_4:8708282-8708301 Msa0975080:intron 55.0%
ACCCCAGCACTGTCAAGTAG+AGG + chr6_4:8708288-8708307 None:intergenic 55.0%
AAAAGGGTGGAGCGAATGGG+TGG + chr6_4:8709302-8709321 None:intergenic 55.0%
CATCCCATGTACATGCCACC+AGG + chr6_4:8709600-8709619 None:intergenic 55.0%
TCGGACACAGACGACAGCCT+TGG + chr6_4:8705470-8705489 None:intergenic 60.0%
!! TGACGACCCGTGGTACTGGC+TGG + chr6_4:8706452-8706471 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 8705067 8710056 8705067 ID=Msa0975080;Name=Msa0975080
chr6_4 mRNA 8705067 8710056 8705067 ID=Msa0975080-mRNA-1;Parent=Msa0975080;Name=Msa0975080-mRNA-1;_AED=0.33;_eAED=0.33;_QI=68|1|1|1|1|1|7|280|400
chr6_4 exon 8705067 8705637 8705067 ID=Msa0975080-mRNA-1:exon:3178;Parent=Msa0975080-mRNA-1
chr6_4 exon 8706469 8706612 8706469 ID=Msa0975080-mRNA-1:exon:3177;Parent=Msa0975080-mRNA-1
chr6_4 exon 8706818 8706998 8706818 ID=Msa0975080-mRNA-1:exon:3176;Parent=Msa0975080-mRNA-1
chr6_4 exon 8707491 8707609 8707491 ID=Msa0975080-mRNA-1:exon:3175;Parent=Msa0975080-mRNA-1
chr6_4 exon 8707733 8707850 8707733 ID=Msa0975080-mRNA-1:exon:3174;Parent=Msa0975080-mRNA-1
chr6_4 exon 8709411 8709505 8709411 ID=Msa0975080-mRNA-1:exon:3173;Parent=Msa0975080-mRNA-1
chr6_4 exon 8709734 8710056 8709734 ID=Msa0975080-mRNA-1:exon:3172;Parent=Msa0975080-mRNA-1
chr6_4 five_prime_UTR 8709989 8710056 8709989 ID=Msa0975080-mRNA-1:five_prime_utr;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8709734 8709988 8709734 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8709411 8709505 8709411 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8707733 8707850 8707733 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8707491 8707609 8707491 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8706818 8706998 8706818 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8706469 8706612 8706469 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 CDS 8705347 8705637 8705347 ID=Msa0975080-mRNA-1:cds;Parent=Msa0975080-mRNA-1
chr6_4 three_prime_UTR 8705067 8705346 8705067 ID=Msa0975080-mRNA-1:three_prime_utr;Parent=Msa0975080-mRNA-1
Gene Sequence

>Msa0975080

ATGGCTTCTTCACTTCATTGCTCTGTTTCACTTCCTTCATCACTTCCAAAACTCTCCAATTTCAACTTCAACACCAACAACAAATTCTTCTCATTCAACCCATCATCAAATTCAAACCATATCTCTACAATCAAATGCTCAGCTTCTTCTTTTTCATCTTTCTCTTCAACATCACTTGATGAAACTGCTATGAGCATTGAAAATCTACGTAGCTTCATCAACCTTAATATCGGAAAATGGAACGGTTCTTTCTATCAATTTGATGCTGGCGGGAATCTGTTGCAACGAGTGAGTACTAAGCTTTCTGTTAGCTCTTATGGGGAAGATGAACTCATGAGTCTCATTCAATCGCTGTACATTAAACAACCTTCATCAAACACTTCAGTTTCTGGAGATGACGATGATGCGGAATGGGCAGAGTACAAAATTAAAGAAACCAATATGTTTACTGTTGACAAGTACCAACAAATAGGCTTTTTCCCATCCGAGAAAGCATTTGCATTGAGGTATCAAACAGCTGGTATGTTGGAAACTGTATTACGGCAAGGGGTTCTTGGAGAAGATGACATTGGTGAAGAATCACCTAGAAATCTCAAACTTCCCTCTCGCCGACCTTCTCTTGTTTGTGAGAATTGCCTGTACTCTTTACAAAGAGATATGCGAGCAAGAGCCTTTCACATTTTGGAGCCAAAAGGCACTGTTGATATGCTTATCATCTTCCTAGAGGAACGAAGTGAGGGGTCTCCTCCTCTACTTGACAGTGCTGGGGACACAGAGAATAGGATTACACCATTTCTTGGTAAATGGAAAGGTCGTTCGGTTACAAATCGAAGTGGTGTCTATGGGTCTACGATTTCTGAAGCAGATACAGTTGTGTTACATGAGATGAATGACAATGGCCAACTTATTCAGGATGTTACTTGTACATCTGATGGGGCAAATGTTACAACCAATGTTCATTGGACTGGCACAATATCAGACAATTTAGTCACATTTGATGGAGGTTATCAGATGATTCTATTACCTGGTGGCATGTACATGGGATGTCCTTGTGATGTAGCAAAAAGTGTGGCACAATCAAAATCTTTCCATTTGGAGTTCTGTTGGTTAGAGACACCTGACAAGAGGCAAAGACTGGTTCGCACGTACGATGTTGAAGGCTTGGCCGTCTCATCTACTTATTTTATTGAGACAAAATTGTGA

Protein sequence

>Msa0975080

MASSLHCSVSLPSSLPKLSNFNFNTNNKFFSFNPSSNSNHISTIKCSASSFSSFSSTSLDETAMSIENLRSFINLNIGKWNGSFYQFDAGGNLLQRVSTKLSVSSYGEDELMSLIQSLYIKQPSSNTSVSGDDDDAEWAEYKIKETNMFTVDKYQQIGFFPSEKAFALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSRRPSLVCENCLYSLQRDMRARAFHILEPKGTVDMLIIFLEERSEGSPPLLDSAGDTENRITPFLGKWKGRSVTNRSGVYGSTISEADTVVLHEMNDNGQLIQDVTCTSDGANVTTNVHWTGTISDNLVTFDGGYQMILLPGGMYMGCPCDVAKSVAQSKSFHLEFCWLETPDKRQRLVRTYDVEGLAVSSTYFIETKL*