Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314080 | XP_013462585.1 | 98.286 | 525 | 8 | 1 | 1 | 525 | 1 | 524 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314080 | sp|Q94C70|NAT2_ARATH | 81.714 | 525 | 95 | 1 | 1 | 525 | 1 | 524 | 0.0 | 897 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa0314080 | 0.806917 | 6.516490e-50 | -8.615850e-47 |
| Msa0156050 | Msa0314080 | 0.825972 | 3.501110e-54 | -8.615850e-47 |
| Msa0156090 | Msa0314080 | 0.821788 | 3.351296e-53 | -8.615850e-47 |
| Msa0170070 | Msa0314080 | 0.829910 | 3.952472e-55 | -8.615850e-47 |
| Msa0191570 | Msa0314080 | 0.805507 | 1.291001e-49 | -8.615850e-47 |
| Msa0235500 | Msa0314080 | 0.820904 | 5.361648e-53 | -8.615850e-47 |
| Msa0274650 | Msa0314080 | 0.889709 | 1.900081e-73 | -8.615850e-47 |
| Msa0314080 | Msa0359010 | 0.808710 | 2.709289e-50 | -8.615850e-47 |
| Msa0314080 | Msa0373170 | 0.805267 | 1.450016e-49 | -8.615850e-47 |
| Msa0314080 | Msa0383560 | 0.804606 | 1.993132e-49 | -8.615850e-47 |
| Msa0314080 | Msa0384870 | 0.814163 | 1.771984e-51 | -8.615850e-47 |
| Msa0314080 | Msa0420430 | 0.813344 | 2.684346e-51 | -8.615850e-47 |
| Msa0314080 | Msa0430080 | 0.800986 | 1.113952e-48 | -8.615850e-47 |
| Msa0314080 | Msa0430170 | 0.802181 | 6.336028e-49 | -8.615850e-47 |
| Msa0314080 | Msa0451170 | 0.811023 | 8.614978e-51 | -8.615850e-47 |
| Msa0314080 | Msa0466520 | 0.822428 | 2.381663e-53 | -8.615850e-47 |
| Msa0314080 | Msa0467690 | 0.808791 | 2.603617e-50 | -8.615850e-47 |
| Msa0314080 | Msa0498610 | 0.805248 | 1.463207e-49 | -8.615850e-47 |
| Msa0314080 | Msa0500920 | 0.821072 | 4.902678e-53 | -8.615850e-47 |
| Msa0314080 | Msa0513080 | 0.811535 | 6.669410e-51 | -8.615850e-47 |
| Msa0314080 | Msa0514020 | 0.809185 | 2.144351e-50 | -8.615850e-47 |
| Msa0314080 | Msa0521830 | 0.819254 | 1.278935e-52 | -8.615850e-47 |
| Msa0314080 | Msa0527850 | 0.807271 | 5.483303e-50 | -8.615850e-47 |
| Msa0314080 | Msa0541740 | 0.826956 | 2.041141e-54 | -8.615850e-47 |
| Msa0314080 | Msa0557850 | 0.813119 | 3.007885e-51 | -8.615850e-47 |
| Msa0314080 | Msa0570010 | 0.815341 | 9.715836e-52 | -8.615850e-47 |
| Msa0314080 | Msa0612520 | 0.856680 | 2.731634e-62 | -8.615850e-47 |
| Msa0314080 | Msa0619710 | 0.831753 | 1.395709e-55 | -8.615850e-47 |
| Msa0314080 | Msa0647440 | 0.803382 | 3.581146e-49 | -8.615850e-47 |
| Msa0314080 | Msa0648760 | 0.805076 | 1.589115e-49 | -8.615850e-47 |
| Msa0314080 | Msa0653160 | 0.842564 | 2.394588e-58 | -8.615850e-47 |
| Msa0314080 | Msa0657210 | 0.809283 | 2.042635e-50 | -8.615850e-47 |
| Msa0314080 | Msa0660090 | 0.807709 | 4.428285e-50 | -8.615850e-47 |
| Msa0314080 | Msa0687090 | 0.834464 | 2.952256e-56 | -8.615850e-47 |
| Msa0314080 | Msa0688620 | 0.806014 | 1.010194e-49 | -8.615850e-47 |
| Msa0314080 | Msa0690320 | 0.807933 | 3.967625e-50 | -8.615850e-47 |
| Msa0314080 | Msa0695560 | 0.836184 | 1.085760e-56 | -8.615850e-47 |
| Msa0314080 | Msa0701250 | 0.821544 | 3.816555e-53 | -8.615850e-47 |
| Msa0314080 | Msa0706150 | 0.828611 | 8.167083e-55 | -8.615850e-47 |
| Msa0314080 | Msa0749190 | 0.805031 | 1.623978e-49 | -8.615850e-47 |
| Msa0314080 | Msa0750520 | 0.812369 | 4.388206e-51 | -8.615850e-47 |
| Msa0314080 | Msa0900090 | 0.813967 | 1.957459e-51 | -8.615850e-47 |
| Msa0314080 | Msa0965470 | 0.821143 | 4.721561e-53 | -8.615850e-47 |
| Msa0314080 | Msa1060900 | 0.812288 | 4.572374e-51 | -8.615850e-47 |
| Msa0314080 | Msa1071410 | 0.808108 | 3.641680e-50 | -8.615850e-47 |
| Msa0314080 | Msa1079640 | 0.808404 | 3.149589e-50 | -8.615850e-47 |
| Msa0314080 | Msa1124470 | 0.818782 | 1.637913e-52 | -8.615850e-47 |
| Msa0314080 | Msa1130780 | 0.809437 | 1.892927e-50 | -8.615850e-47 |
| Msa0314080 | Msa1144990 | 0.804133 | 2.500699e-49 | -8.615850e-47 |
| Msa0314080 | Msa1148630 | 0.820018 | 8.559623e-53 | -8.615850e-47 |
| Msa0314080 | Msa1183910 | 0.805216 | 1.485585e-49 | -8.615850e-47 |
| Msa0314080 | Msa1228580 | 0.805927 | 1.053975e-49 | -8.615850e-47 |
| Msa0314080 | Msa1228630 | 0.810205 | 1.294235e-50 | -8.615850e-47 |
| Msa0314080 | Msa1263740 | 0.812547 | 4.013917e-51 | -8.615850e-47 |
| Msa0314080 | Msa1263780 | 0.814803 | 1.279112e-51 | -8.615850e-47 |
| Msa0314080 | Msa1267930 | 0.821897 | 3.162291e-53 | -8.615850e-47 |
| Msa0314080 | Msa1297070 | 0.803764 | 2.982742e-49 | -8.615850e-47 |
| Msa0314080 | Msa1299980 | 0.814323 | 1.633530e-51 | -8.615850e-47 |
| Msa0314080 | Msa1308850 | 0.816485 | 5.398684e-52 | -8.615850e-47 |
| Msa0314080 | Msa1308860 | 0.801967 | 7.012932e-49 | -8.615850e-47 |
| Msa0314080 | Msa1342810 | 0.846921 | 1.602899e-59 | -8.615850e-47 |
| Msa0314080 | Msa1381800 | 0.804277 | 2.334034e-49 | -8.615850e-47 |
| Msa0314080 | Msa1387500 | 0.816300 | 5.936677e-52 | -8.615850e-47 |
| Msa0314080 | Msa1389820 | 0.826105 | 3.255651e-54 | -8.615850e-47 |
| Msa0314080 | Msa1406720 | 0.827634 | 1.403656e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314080 | MtrunA17_Chr2g0284061 | 98.286 | 525 | 8 | 1 | 1 | 525 | 1 | 524 | 0.0 | 1050 |
| Msa0314080 | MtrunA17_Chr8g0379171 | 83.048 | 525 | 88 | 1 | 1 | 525 | 1 | 524 | 0.0 | 910 |
| Msa0314080 | MtrunA17_Chr3g0119521 | 69.515 | 515 | 156 | 1 | 12 | 525 | 6 | 520 | 0.0 | 760 |
| Msa0314080 | MtrunA17_Chr8g0364611 | 59.770 | 522 | 208 | 1 | 4 | 523 | 10 | 531 | 0.0 | 650 |
| Msa0314080 | MtrunA17_Chr3g0117941 | 58.349 | 521 | 215 | 1 | 5 | 523 | 10 | 530 | 0.0 | 627 |
| Msa0314080 | MtrunA17_Chr4g0059331 | 58.126 | 523 | 217 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0314080 | MtrunA17_Chr5g0414131 | 56.214 | 523 | 226 | 2 | 4 | 523 | 14 | 536 | 0.0 | 595 |
| Msa0314080 | MtrunA17_Chr1g0154001 | 54.706 | 510 | 231 | 0 | 14 | 523 | 36 | 545 | 0.0 | 580 |
| Msa0314080 | MtrunA17_Chr1g0207021 | 54.269 | 527 | 234 | 4 | 2 | 525 | 5 | 527 | 0.0 | 569 |
| Msa0314080 | MtrunA17_Chr3g0134911 | 48.208 | 558 | 242 | 5 | 5 | 523 | 34 | 583 | 0.0 | 545 |
| Msa0314080 | MtrunA17_Chr5g0405471 | 51.132 | 530 | 237 | 5 | 12 | 523 | 35 | 560 | 0.0 | 536 |
| Msa0314080 | MtrunA17_Chr8g0367361 | 34.901 | 553 | 320 | 6 | 2 | 522 | 224 | 768 | 3.71e-110 | 345 |
| Msa0314080 | MtrunA17_Chr5g0412181 | 35.551 | 526 | 303 | 5 | 25 | 518 | 172 | 693 | 7.87e-105 | 329 |
| Msa0314080 | MtrunA17_Chr2g0320981 | 35.634 | 536 | 307 | 5 | 21 | 522 | 147 | 678 | 4.22e-104 | 327 |
| Msa0314080 | MtrunA17_Chr4g0027121 | 35.448 | 536 | 309 | 6 | 21 | 522 | 154 | 686 | 1.90e-100 | 317 |
| Msa0314080 | MtrunA17_Chr2g0332871 | 33.399 | 506 | 285 | 8 | 41 | 522 | 166 | 643 | 3.12e-92 | 295 |
| Msa0314080 | MtrunA17_Chr8g0379181 | 81.481 | 54 | 10 | 0 | 402 | 455 | 9 | 62 | 4.67e-23 | 92.8 |
| Msa0314080 | MtrunA17_Chr5g0418111 | 66.071 | 56 | 19 | 0 | 456 | 511 | 39 | 94 | 1.77e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314080 | AT2G34190.1 | 81.714 | 525 | 95 | 1 | 1 | 525 | 1 | 524 | 0.0 | 897 |
| Msa0314080 | AT2G05760.1 | 66.602 | 515 | 171 | 1 | 12 | 525 | 6 | 520 | 0.0 | 736 |
| Msa0314080 | AT5G62890.1 | 57.935 | 523 | 218 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0314080 | AT5G62890.2 | 57.935 | 523 | 218 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0314080 | AT5G62890.3 | 57.935 | 523 | 218 | 1 | 3 | 523 | 8 | 530 | 0.0 | 622 |
| Msa0314080 | AT1G60030.1 | 56.430 | 521 | 225 | 1 | 5 | 523 | 16 | 536 | 0.0 | 615 |
| Msa0314080 | AT2G26510.1 | 56.055 | 512 | 224 | 1 | 13 | 523 | 36 | 547 | 0.0 | 586 |
| Msa0314080 | AT5G49990.2 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0314080 | AT5G49990.3 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0314080 | AT5G49990.1 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0314080 | AT5G49990.4 | 55.703 | 526 | 230 | 2 | 1 | 523 | 1 | 526 | 0.0 | 580 |
| Msa0314080 | AT1G10540.1 | 53.244 | 524 | 240 | 3 | 5 | 523 | 14 | 537 | 0.0 | 580 |
| Msa0314080 | AT1G49960.1 | 54.493 | 523 | 236 | 1 | 3 | 523 | 2 | 524 | 0.0 | 567 |
| Msa0314080 | AT1G65550.1 | 49.621 | 528 | 255 | 3 | 5 | 523 | 14 | 539 | 0.0 | 557 |
| Msa0314080 | AT5G62890.4 | 57.174 | 453 | 194 | 0 | 3 | 455 | 8 | 460 | 0.0 | 534 |
| Msa0314080 | AT1G10540.2 | 53.600 | 375 | 171 | 2 | 5 | 376 | 14 | 388 | 7.79e-142 | 414 |
| Msa0314080 | AT2G26510.3 | 55.769 | 364 | 161 | 0 | 13 | 376 | 36 | 399 | 1.45e-138 | 407 |
| Msa0314080 | AT2G26510.2 | 55.556 | 351 | 156 | 0 | 13 | 363 | 36 | 386 | 6.14e-133 | 393 |
| Msa0314080 | AT5G25420.1 | 43.119 | 436 | 180 | 5 | 5 | 440 | 26 | 393 | 3.86e-124 | 370 |
| Msa0314080 | AT2G27810.1 | 35.000 | 540 | 313 | 6 | 17 | 522 | 166 | 701 | 1.88e-98 | 313 |
| Msa0314080 | AT4G38050.1 | 35.393 | 534 | 309 | 5 | 21 | 522 | 175 | 704 | 9.41e-98 | 311 |
| Msa0314080 | AT2G27810.4 | 33.511 | 564 | 313 | 7 | 17 | 522 | 166 | 725 | 4.97e-93 | 299 |
| Msa0314080 | AT2G27810.2 | 35.915 | 426 | 253 | 4 | 17 | 424 | 166 | 589 | 3.88e-78 | 256 |
| Msa0314080 | AT2G27810.3 | 36.148 | 379 | 222 | 4 | 17 | 377 | 166 | 542 | 3.17e-66 | 224 |
Find 157 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAGCATACAGATTATTT+TGG | 0.131330 | 2_4:+9650182 | Msa0314080:CDS |
| TGTCTTTCTTCAGGAAAATT+TGG | 0.179358 | 2_4:+9651791 | Msa0314080:intron |
| GGTGTAGAACTCTTCATTTC+TGG | 0.205089 | 2_4:-9652675 | None:intergenic |
| GGGAGGGTCTTATGCATTTA+TGG | 0.208667 | 2_4:+9649507 | Msa0314080:CDS |
| ATCTTGTTGAATGGACTATT+TGG | 0.208821 | 2_4:+9651464 | Msa0314080:CDS |
| AACAGTGGAGTCAATTATTC+TGG | 0.216307 | 2_4:+9649140 | Msa0314080:intron |
| CAATTATATTGTGTTAATTC+TGG | 0.216551 | 2_4:-9650795 | None:intergenic |
| TCATGAATAATGGATATAAT+TGG | 0.217336 | 2_4:-9649532 | None:intergenic |
| GTAATTGCATTATCTGGTTT+TGG | 0.221036 | 2_4:+9650346 | Msa0314080:CDS |
| GTTGGACATTGTGTTGAAAT+TGG | 0.250807 | 2_4:+9650497 | Msa0314080:CDS |
| TTCATTTCTTGTGCCTTTGA+TGG | 0.265215 | 2_4:+9649209 | Msa0314080:CDS |
| ACCAAGTTTAGAACATTTAA+TGG | 0.265736 | 2_4:+9652647 | Msa0314080:CDS |
| GTTCCAGTAATTGCATTATC+TGG | 0.268188 | 2_4:+9650340 | Msa0314080:CDS |
| ACACTCTTTCAGACACTCTT+TGG | 0.275867 | 2_4:+9649463 | Msa0314080:CDS |
| TATAATATTTCTTCTTGCTT+TGG | 0.282010 | 2_4:-9648867 | None:intergenic |
| GCATAGATGCAAACCCTTCT+TGG | 0.282942 | 2_4:+9648928 | Msa0314080:CDS |
| TTTGATGTTGGTCATGCTTT+TGG | 0.285521 | 2_4:+9651039 | Msa0314080:CDS |
| CCATGGCATTCCCCTATCTT+TGG | 0.286512 | 2_4:-9652621 | None:intergenic |
| TGGCATGATGGTCGCTGTTT+TGG | 0.287910 | 2_4:+9651059 | Msa0314080:CDS |
| GTCTTCTATGGAGGCCAATT+TGG | 0.291156 | 2_4:-9649557 | None:intergenic |
| TTGTATCAACCACAATGATA+TGG | 0.300612 | 2_4:+9650727 | Msa0314080:CDS |
| TGTGTCCTGTTTGGCCTTGT+TGG | 0.301881 | 2_4:+9651860 | Msa0314080:CDS |
| CATAGATGCAAACCCTTCTT+GGG | 0.302981 | 2_4:+9648929 | Msa0314080:CDS |
| ATGAGGAGCCTCTTTATTAC+TGG | 0.305046 | 2_4:+9652008 | Msa0314080:CDS |
| CAGGGAACCCTCGGTTAAAT+AGG | 0.305261 | 2_4:-9650369 | None:intergenic |
| GGCTCATAGTACCTCAATTA+AGG | 0.307644 | 2_4:-9651085 | None:intergenic |
| CATTATTCATGACTCCAAAT+TGG | 0.314497 | 2_4:+9649543 | Msa0314080:CDS |
| AGAGAGAATGTAGGGCTTCT+AGG | 0.315863 | 2_4:+9651590 | Msa0314080:intron |
| AATTATGGGCCATTTGTTCT+AGG | 0.323560 | 2_4:+9650214 | Msa0314080:CDS |
| AATAAGCCGAAAATAGCTTT+TGG | 0.326517 | 2_4:-9653018 | None:intergenic |
| TCTCGCTTCCATCATTTCAT+TGG | 0.327039 | 2_4:+9648662 | Msa0314080:five_prime_UTR |
| AAACCAGATAATGCAATTAC+TGG | 0.336298 | 2_4:-9650343 | None:intergenic |
| TTTGGGCTTTAGTCAATTAT+GGG | 0.341174 | 2_4:+9650200 | Msa0314080:CDS |
| AACCAAATGTGGGTCTTCTA+TGG | 0.351482 | 2_4:-9649569 | None:intergenic |
| CATAACTTTCTTCGTTAAGA+TGG | 0.352345 | 2_4:-9652728 | None:intergenic |
| GACTACAAGCCTGTTTGAAT+TGG | 0.353873 | 2_4:+9652918 | Msa0314080:three_prime_UTR |
| ACAAGAATAGCTCCAAAGAT+AGG | 0.366819 | 2_4:+9652609 | Msa0314080:CDS |
| TTCACTTCCAAGGCCCTTCA+TGG | 0.378070 | 2_4:+9652077 | Msa0314080:CDS |
| ATTTAACATAGACTTCTTCA+TGG | 0.386107 | 2_4:+9652883 | Msa0314080:three_prime_UTR |
| TTCTGAGCCGCGGTGTTGGC+TGG | 0.386703 | 2_4:+9651429 | Msa0314080:CDS |
| CTGCTCATACAAAGGCTAGA+TGG | 0.390944 | 2_4:+9652102 | Msa0314080:CDS |
| GGTGTTGGCTGGCAGGGAAT+TGG | 0.392481 | 2_4:+9651440 | Msa0314080:CDS |
| CCACCAATGGACCAACTTCA+TGG | 0.399447 | 2_4:+9648894 | Msa0314080:CDS |
| CATCTAGCCTTTGTATGAGC+AGG | 0.403393 | 2_4:-9652101 | None:intergenic |
| TTGTTTATCTGACAGTCAAC+TGG | 0.406456 | 2_4:+9651353 | Msa0314080:intron |
| GAGCCGCGGTGTTGGCTGGC+AGG | 0.407123 | 2_4:+9651433 | Msa0314080:CDS |
| TCAAATATGCCAATTCAAAC+AGG | 0.410323 | 2_4:-9652927 | None:intergenic |
| ACAAAGTGTTGCTTAAATCA+TGG | 0.419002 | 2_4:+9648839 | Msa0314080:exon |
| TCATTTCTTGTGCCTTTGAT+GGG | 0.420771 | 2_4:+9649210 | Msa0314080:CDS |
| AGCAGGGCCATGAAGGGCCT+TGG | 0.421593 | 2_4:-9652084 | None:intergenic |
| TTGGAGGGAAAGGGAAAGTA+AGG | 0.425984 | 2_4:-9648722 | None:intergenic |
| CGGTGTTGCACTTGCTAGCC+GGG | 0.429213 | 2_4:-9651393 | None:intergenic |
| TCCATTAAATGTTCTAAACT+TGG | 0.433772 | 2_4:-9652648 | None:intergenic |
| ACTCACCAACAAGGCCAAAC+AGG | 0.434703 | 2_4:-9651865 | None:intergenic |
| CAATTTGGAGTCATGAATAA+TGG | 0.437433 | 2_4:-9649542 | None:intergenic |
| GAATAGATAATCCCAAGAAA+AGG | 0.438521 | 2_4:-9652037 | None:intergenic |
| CTCCATAGAAGACCCACATT+TGG | 0.438916 | 2_4:+9649567 | Msa0314080:CDS |
| GTAGGAAAACCCCACTCAAA+AGG | 0.440834 | 2_4:-9651015 | None:intergenic |
| GCGGTGTTGCACTTGCTAGC+CGG | 0.441312 | 2_4:-9651394 | None:intergenic |
| GCTATGTACTGTGTCCTGTT+TGG | 0.442936 | 2_4:+9651851 | Msa0314080:CDS |
| ACCTCATTTCTTCTGCTCCA+TGG | 0.445011 | 2_4:+9650835 | Msa0314080:CDS |
| CATGAATAATGGATATAATT+GGG | 0.445103 | 2_4:-9649531 | None:intergenic |
| TGCACCTTGAACTGCTCTCA+TGG | 0.449979 | 2_4:-9650148 | None:intergenic |
| TCTGTTTGTAGCATTCTCTC+AGG | 0.452906 | 2_4:+9650535 | Msa0314080:CDS |
| GGAATTGGAATCTTGTTGAA+TGG | 0.453442 | 2_4:+9651455 | Msa0314080:CDS |
| CATGTTCTGAGCCGCGGTGT+TGG | 0.457466 | 2_4:+9651425 | Msa0314080:CDS |
| AATTAACACAATATAATTGC+AGG | 0.457977 | 2_4:+9650799 | Msa0314080:CDS |
| CAAGAATAGCTCCAAAGATA+GGG | 0.463643 | 2_4:+9652610 | Msa0314080:CDS |
| GGACTATTTGGAACACTGAC+TGG | 0.466218 | 2_4:+9651476 | Msa0314080:CDS |
| CTTATTTCTATAAGCTCTCT+AGG | 0.469989 | 2_4:+9653035 | Msa0314080:three_prime_UTR |
| AATAAATTACCTAGAACAAA+TGG | 0.470454 | 2_4:-9650223 | None:intergenic |
| TGCTCATACAAAGGCTAGAT+GGG | 0.470500 | 2_4:+9652103 | Msa0314080:CDS |
| TGTATCAACCACAATGATAT+GGG | 0.477279 | 2_4:+9650728 | Msa0314080:CDS |
| AGCCGCGGTGTTGGCTGGCA+GGG | 0.477678 | 2_4:+9651434 | Msa0314080:CDS |
| CCCTTCCTTTCAACCTCCAC+CGG | 0.480141 | 2_4:+9652696 | Msa0314080:CDS |
| TTCAGACACTCTTTGGAACT+CGG | 0.481780 | 2_4:+9649470 | Msa0314080:CDS |
| AATAGATAATCCCAAGAAAA+GGG | 0.484955 | 2_4:-9652036 | None:intergenic |
| AGAGTCATTCAAATTTCAGC+AGG | 0.489686 | 2_4:+9651635 | Msa0314080:CDS |
| TTGTATGAGCAGGGCCATGA+AGG | 0.491094 | 2_4:-9652091 | None:intergenic |
| AGACACAACTTTGGAGGGAA+AGG | 0.494568 | 2_4:-9648732 | None:intergenic |
| AAAAGTATGATTTCTAGATA+AGG | 0.496922 | 2_4:+9652777 | Msa0314080:three_prime_UTR |
| AGGGAAAGGGAAAGTAAGGT+TGG | 0.497576 | 2_4:-9648718 | None:intergenic |
| GGTAAAGACCAATGAAATGA+TGG | 0.497716 | 2_4:-9648670 | None:intergenic |
| AAAGCAAATCTCTCTAGTAT+TGG | 0.497957 | 2_4:-9650702 | None:intergenic |
| TGGAACACTGACTGGTTCAT+CGG | 0.499597 | 2_4:+9651484 | Msa0314080:CDS |
| ACCATGACAGAGAGAATGTA+GGG | 0.501591 | 2_4:+9651582 | Msa0314080:intron |
| ATGATATTCTTCTCAATGCT+AGG | 0.506019 | 2_4:+9651662 | Msa0314080:CDS |
| GCACATCTCTTAACAACAAG+TGG | 0.507738 | 2_4:+9650756 | Msa0314080:CDS |
| GGAGTGAGTCAATGTTGAAA+AGG | 0.510122 | 2_4:-9648697 | None:intergenic |
| TGAAAAGACAGACACAACTT+TGG | 0.510180 | 2_4:-9648741 | None:intergenic |
| AGAAATGTACTAACCAAATG+TGG | 0.512832 | 2_4:-9649580 | None:intergenic |
| GTGATGATTGTGTATCATAT+TGG | 0.512902 | 2_4:+9652832 | Msa0314080:three_prime_UTR |
| CCATGAAGTTGGTCCATTGG+TGG | 0.513106 | 2_4:-9648894 | None:intergenic |
| TAGGAAAACCCCACTCAAAA+GGG | 0.515152 | 2_4:-9651014 | None:intergenic |
| ATCAAAGGCACAAGAAATGA+AGG | 0.517148 | 2_4:-9649207 | None:intergenic |
| ACAGTGGAGTCAATTATTCT+GGG | 0.518411 | 2_4:+9649141 | Msa0314080:intron |
| AAACCCCACTCAAAAGGGTA+TGG | 0.522899 | 2_4:-9651009 | None:intergenic |
| ACCGGTGGAGGTTGAAAGGA+AGG | 0.527236 | 2_4:-9652697 | None:intergenic |
| AACTTTCTTCGTTAAGATGG+AGG | 0.532170 | 2_4:-9652725 | None:intergenic |
| TTTCTTGTGCCTTTGATGGG+TGG | 0.532477 | 2_4:+9649213 | Msa0314080:CDS |
| ACCATGGAGCAGAAGAAATG+AGG | 0.539829 | 2_4:-9650836 | None:intergenic |
| TTTCAGAGAATTCACTTCCA+AGG | 0.541420 | 2_4:+9652067 | Msa0314080:CDS |
| GTCGTACCACAGGGAACCCT+CGG | 0.543240 | 2_4:-9650378 | None:intergenic |
| GACACAACTTTGGAGGGAAA+GGG | 0.543712 | 2_4:-9648731 | None:intergenic |
| AAAACCATGAGAGCAGTTCA+AGG | 0.544297 | 2_4:+9650144 | Msa0314080:CDS |
| ACTTTCTTCGTTAAGATGGA+GGG | 0.545990 | 2_4:-9652724 | None:intergenic |
| ATGCCATGAAGTTGGTCCAT+TGG | 0.548504 | 2_4:-9648897 | None:intergenic |
| GGGAAACACCAGTAATAAAG+AGG | 0.549962 | 2_4:-9652016 | None:intergenic |
| GCATGACCAACATCAAATGT+AGG | 0.550797 | 2_4:-9651033 | None:intergenic |
| CTCAGAACATGAGGAGGCGG+CGG | 0.558241 | 2_4:-9651413 | None:intergenic |
| GTGAATTCTCTGAAATACTC+AGG | 0.558403 | 2_4:-9652059 | None:intergenic |
| AGTCAATGTTGAAAAGGAGA+AGG | 0.559185 | 2_4:-9648691 | None:intergenic |
| AAAGACAGACACAACTTTGG+AGG | 0.562155 | 2_4:-9648738 | None:intergenic |
| AACTCGGTTACCAACAGTGA+TGG | 0.563295 | 2_4:+9649486 | Msa0314080:CDS |
| TCATGGCCCTGCTCATACAA+AGG | 0.565723 | 2_4:+9652094 | Msa0314080:CDS |
| AACAATGAATGCAACAGTTG+AGG | 0.566026 | 2_4:-9652558 | None:intergenic |
| CATGAAGTTGGTCCATTGGT+GGG | 0.571065 | 2_4:-9648893 | None:intergenic |
| CGTCAAGAAAATATGTTGAG+AGG | 0.571206 | 2_4:+9652754 | Msa0314080:three_prime_UTR |
| TGCTACAAACAGAATTAACA+TGG | 0.573720 | 2_4:-9650525 | None:intergenic |
| ACTCGGTTACCAACAGTGAT+GGG | 0.579565 | 2_4:+9649487 | Msa0314080:CDS |
| AGTACTCTATGCCATGAAGT+TGG | 0.580671 | 2_4:-9648905 | None:intergenic |
| CGGCTCAGAACATGAGGAGG+CGG | 0.580815 | 2_4:-9651416 | None:intergenic |
| TAAGACCCTCCCATCACTGT+TGG | 0.582978 | 2_4:-9649496 | None:intergenic |
| AGTGGATACTAACCCCAAGA+AGG | 0.584218 | 2_4:-9648942 | None:intergenic |
| CTTCTAGGAAGTACTCGTGT+TGG | 0.586135 | 2_4:+9651605 | Msa0314080:CDS |
| ATCTAGCCTTTGTATGAGCA+GGG | 0.587048 | 2_4:-9652100 | None:intergenic |
| TGGAGCAGAAGAAATGAGGT+TGG | 0.588053 | 2_4:-9650832 | None:intergenic |
| AAGACAGACACAACTTTGGA+GGG | 0.592561 | 2_4:-9648737 | None:intergenic |
| AAGAATAGCTCCAAAGATAG+GGG | 0.595815 | 2_4:+9652611 | Msa0314080:CDS |
| ACACCGCGGCTCAGAACATG+AGG | 0.597392 | 2_4:-9651422 | None:intergenic |
| GAGCATACACAGCTGCGTCC+CGG | 0.599026 | 2_4:+9651375 | Msa0314080:CDS |
| TGTATGAGCAGGGCCATGAA+GGG | 0.600095 | 2_4:-9652090 | None:intergenic |
| TGTTGTTAAGAGATGTGCAT+AGG | 0.600614 | 2_4:-9650751 | None:intergenic |
| AACCATGACAGAGAGAATGT+AGG | 0.602496 | 2_4:+9651581 | Msa0314080:intron |
| ACATCAGTTCCACCCATCAA+AGG | 0.612232 | 2_4:-9649222 | None:intergenic |
| CCTCCTCATGTTCTGAGCCG+CGG | 0.613487 | 2_4:+9651419 | Msa0314080:CDS |
| AATATTATACCACCCACCAA+TGG | 0.613532 | 2_4:+9648881 | Msa0314080:CDS |
| GAAATGTACTAACCAAATGT+GGG | 0.622722 | 2_4:-9649579 | None:intergenic |
| TCAGGGTGATAAAGTGAGAG+TGG | 0.627396 | 2_4:+9649408 | Msa0314080:intron |
| CAAATGTGGGTCTTCTATGG+AGG | 0.629533 | 2_4:-9649566 | None:intergenic |
| GTGGATACTAACCCCAAGAA+GGG | 0.636720 | 2_4:-9648941 | None:intergenic |
| CCGCGGCTCAGAACATGAGG+AGG | 0.643457 | 2_4:-9651419 | None:intergenic |
| ATAGATGCAAACCCTTCTTG+GGG | 0.648257 | 2_4:+9648930 | Msa0314080:CDS |
| TTTATTAATACTCACCAACA+AGG | 0.649656 | 2_4:-9651874 | None:intergenic |
| GTTCTAAACTTGGTCCACCA+TGG | 0.655549 | 2_4:-9652638 | None:intergenic |
| CGGTTACCAACAGTGATGGG+AGG | 0.660854 | 2_4:+9649490 | Msa0314080:CDS |
| TTACTAACATGAACTCAATG+AGG | 0.664480 | 2_4:+9651991 | Msa0314080:CDS |
| GGTTACCAACAGTGATGGGA+GGG | 0.664821 | 2_4:+9649491 | Msa0314080:CDS |
| GAAGTTGGTCCATTGGTGGG+TGG | 0.667936 | 2_4:-9648890 | None:intergenic |
| GCTACAAACAGAATTAACAT+GGG | 0.677346 | 2_4:-9650524 | None:intergenic |
| TGCATAGGCCCATATCATTG+TGG | 0.683156 | 2_4:-9650736 | None:intergenic |
| AAGATAGGGGAATGCCATGG+TGG | 0.684562 | 2_4:+9652624 | Msa0314080:CDS |
| ATTACTGGAACCATTCCAAG+TGG | 0.687109 | 2_4:-9650328 | None:intergenic |
| CCGGTGGAGGTTGAAAGGAA+GGG | 0.694820 | 2_4:-9652696 | None:intergenic |
| TTCCCTGCCAGCCAACACCG+CGG | 0.694982 | 2_4:-9651436 | None:intergenic |
| CCAAAGATAGGGGAATGCCA+TGG | 0.696229 | 2_4:+9652621 | Msa0314080:CDS |
| ATTTAACCGAGGGTTCCCTG+TGG | 0.734545 | 2_4:+9650372 | Msa0314080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAGAAAAGAAAAA+GGG | - | chr2_4:9648783-9648802 | None:intergenic | 10.0% |
| !!! | ATTTATTTTTTGATAATCTA+GGG | - | chr2_4:9649268-9649287 | None:intergenic | 10.0% |
| !!! | TATTTATTTTTTGATAATCT+AGG | - | chr2_4:9649269-9649288 | None:intergenic | 10.0% |
| !! | GAAAAATAAAGAAAAGAAAA+AGG | - | chr2_4:9648784-9648803 | None:intergenic | 15.0% |
| !! | TTGAATATCAAAGAAATTAA+GGG | - | chr2_4:9649302-9649321 | None:intergenic | 15.0% |
| !! | ATTGAATATCAAAGAAATTA+AGG | - | chr2_4:9649303-9649322 | None:intergenic | 15.0% |
| !!! | AGTTGGTATTTATTAATTAT+TGG | + | chr2_4:9649358-9649377 | Msa0314080:intron | 15.0% |
| !!! | TTTTCTATTTTACAATGTTT+AGG | + | chr2_4:9649819-9649838 | Msa0314080:intron | 15.0% |
| !!! | TTTCTATTTTACAATGTTTA+GGG | + | chr2_4:9649820-9649839 | Msa0314080:intron | 15.0% |
| !! | TATAATATTTCTTCTTGCTT+TGG | - | chr2_4:9648870-9648889 | None:intergenic | 20.0% |
| !!! | CATGAATAATGGATATAATT+GGG | - | chr2_4:9649534-9649553 | None:intergenic | 20.0% |
| !!! | TCATGAATAATGGATATAAT+TGG | - | chr2_4:9649535-9649554 | None:intergenic | 20.0% |
| !!! | TTTTCTATTATACAATGCTT+AGG | + | chr2_4:9650012-9650031 | Msa0314080:intron | 20.0% |
| !! | AACAAATCTCTGAATATAAA+TGG | - | chr2_4:9650124-9650143 | None:intergenic | 20.0% |
| !! | AATAAATTACCTAGAACAAA+TGG | - | chr2_4:9650226-9650245 | None:intergenic | 20.0% |
| !! | CAATTATATTGTGTTAATTC+TGG | - | chr2_4:9650798-9650817 | None:intergenic | 20.0% |
| !! | AATTAACACAATATAATTGC+AGG | + | chr2_4:9650799-9650818 | Msa0314080:CDS | 20.0% |
| !!! | AACTACTTAAGAGATTATTT+TGG | - | chr2_4:9650867-9650886 | None:intergenic | 20.0% |
| !! | TGAAATAAGTTAATCCAAAA+AGG | - | chr2_4:9651109-9651128 | None:intergenic | 20.0% |
| !!! | TTCATAGTTTTCACTTTAAA+TGG | + | chr2_4:9651537-9651556 | Msa0314080:intron | 20.0% |
| !!! | GAAAGTACATTAATTTTGAT+AGG | - | chr2_4:9651713-9651732 | None:intergenic | 20.0% |
| !!! | GATATTTTATTGAAACCAAA+TGG | + | chr2_4:9652264-9652283 | Msa0314080:intron | 20.0% |
| !!! | AAAAGTATGATTTCTAGATA+AGG | + | chr2_4:9652777-9652796 | Msa0314080:three_prime_UTR | 20.0% |
| ! | TGAAAAATTAATGGCTATGA+AGG | - | chr2_4:9648809-9648828 | None:intergenic | 25.0% |
| ! | TAACACTGCTGAAAAATTAA+TGG | - | chr2_4:9648818-9648837 | None:intergenic | 25.0% |
| ! | TATGATTCAATGAATGATTC+AGG | + | chr2_4:9649390-9649409 | Msa0314080:intron | 25.0% |
| ! | ATGATTCAATGAATGATTCA+GGG | + | chr2_4:9649391-9649410 | Msa0314080:intron | 25.0% |
| ! | CTACTTATCTGTTTACTTTA+GGG | - | chr2_4:9649722-9649741 | None:intergenic | 25.0% |
| ! | TCTACTTATCTGTTTACTTT+AGG | - | chr2_4:9649723-9649742 | None:intergenic | 25.0% |
| ! | TGAAATGTACTACTAAGAAA+GGG | - | chr2_4:9649921-9649940 | None:intergenic | 25.0% |
| ! | TTGAAATGTACTACTAAGAA+AGG | - | chr2_4:9649922-9649941 | None:intergenic | 25.0% |
| !! | CAATTTTAAGCTCATGATTT+TGG | + | chr2_4:9649939-9649958 | Msa0314080:intron | 25.0% |
| !! | ATCAAGCATACAGATTATTT+TGG | + | chr2_4:9650182-9650201 | Msa0314080:CDS | 25.0% |
| !! | TCAAGCATACAGATTATTTT+GGG | + | chr2_4:9650183-9650202 | Msa0314080:CDS | 25.0% |
| ! | TGAAAAACCTGGAAATTAAT+AGG | - | chr2_4:9650306-9650325 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTCCTTTTTCTTC+AGG | + | chr2_4:9650475-9650494 | Msa0314080:intron | 25.0% |
| ! | TTTACAACAATATCTCAACA+AGG | - | chr2_4:9650953-9650972 | None:intergenic | 25.0% |
| ! | TTTATTAATACTCACCAACA+AGG | - | chr2_4:9651877-9651896 | None:intergenic | 25.0% |
| ! | AATAGATAATCCCAAGAAAA+GGG | - | chr2_4:9652039-9652058 | None:intergenic | 25.0% |
| ! | TAATTATCATCAGAAAGTGA+CGG | + | chr2_4:9652381-9652400 | Msa0314080:intron | 25.0% |
| ! | GAACTGAAAAACAAATCAAA+AGG | - | chr2_4:9652507-9652526 | None:intergenic | 25.0% |
| !! | ACCAAGTTTAGAACATTTAA+TGG | + | chr2_4:9652647-9652666 | Msa0314080:CDS | 25.0% |
| !! | TCCATTAAATGTTCTAAACT+TGG | - | chr2_4:9652651-9652670 | None:intergenic | 25.0% |
| !! | ATTTTCTTAGTGTGATAGTT+AGG | + | chr2_4:9652805-9652824 | Msa0314080:three_prime_UTR | 25.0% |
| ! | ATTTAACATAGACTTCTTCA+TGG | + | chr2_4:9652883-9652902 | Msa0314080:three_prime_UTR | 25.0% |
| !! | ACAAAGTGTTGCTTAAATCA+TGG | + | chr2_4:9648839-9648858 | Msa0314080:exon | 30.0% |
| AAGAATGAAAATGCAGATGA+GGG | - | chr2_4:9648969-9648988 | None:intergenic | 30.0% | |
| TAAGAATGAAAATGCAGATG+AGG | - | chr2_4:9648970-9648989 | None:intergenic | 30.0% | |
| !! | TGCTTTGTTTCATGCTATAT+AGG | + | chr2_4:9649029-9649048 | Msa0314080:intron | 30.0% |
| ! | ATTATGAGCTATGACCATTT+TGG | + | chr2_4:9649082-9649101 | Msa0314080:intron | 30.0% |
| !! | ATGTTTTGAACTATGAACAG+TGG | + | chr2_4:9649125-9649144 | Msa0314080:intron | 30.0% |
| ! | CAATTTGGAGTCATGAATAA+TGG | - | chr2_4:9649545-9649564 | None:intergenic | 30.0% |
| CATTATTCATGACTCCAAAT+TGG | + | chr2_4:9649543-9649562 | Msa0314080:CDS | 30.0% | |
| GAAATGTACTAACCAAATGT+GGG | - | chr2_4:9649582-9649601 | None:intergenic | 30.0% | |
| AGAAATGTACTAACCAAATG+TGG | - | chr2_4:9649583-9649602 | None:intergenic | 30.0% | |
| CAATGATTGATTACTGAGTT+CGG | + | chr2_4:9649755-9649774 | Msa0314080:intron | 30.0% | |
| !! | TCTTTTCATCTCAATTTGCT+CGG | + | chr2_4:9649874-9649893 | Msa0314080:intron | 30.0% |
| !! | TTTTGGGCTTTAGTCAATTA+TGG | + | chr2_4:9650199-9650218 | Msa0314080:CDS | 30.0% |
| ! | TTTGGGCTTTAGTCAATTAT+GGG | + | chr2_4:9650200-9650219 | Msa0314080:CDS | 30.0% |
| AAAACCTGGAAATTAATAGG+AGG | - | chr2_4:9650303-9650322 | None:intergenic | 30.0% | |
| AAACCAGATAATGCAATTAC+TGG | - | chr2_4:9650346-9650365 | None:intergenic | 30.0% | |
| !! | GTAATTGCATTATCTGGTTT+TGG | + | chr2_4:9650346-9650365 | Msa0314080:CDS | 30.0% |
| GCTACAAACAGAATTAACAT+GGG | - | chr2_4:9650527-9650546 | None:intergenic | 30.0% | |
| TGCTACAAACAGAATTAACA+TGG | - | chr2_4:9650528-9650547 | None:intergenic | 30.0% | |
| TGACATCATAAAAGTGAAGT+TGG | - | chr2_4:9650566-9650585 | None:intergenic | 30.0% | |
| AAAGCAAATCTCTCTAGTAT+TGG | - | chr2_4:9650705-9650724 | None:intergenic | 30.0% | |
| TTGTATCAACCACAATGATA+TGG | + | chr2_4:9650727-9650746 | Msa0314080:CDS | 30.0% | |
| TGTATCAACCACAATGATAT+GGG | + | chr2_4:9650728-9650747 | Msa0314080:CDS | 30.0% | |
| !!! | GATTATTTTGGTACTAACCA+TGG | - | chr2_4:9650855-9650874 | None:intergenic | 30.0% |
| TCTTAAATATGTTGCCTTAC+AGG | + | chr2_4:9650977-9650996 | Msa0314080:intron | 30.0% | |
| TATTTCAAACAGTCTAACAG+GGG | - | chr2_4:9651151-9651170 | None:intergenic | 30.0% | |
| CTATTTCAAACAGTCTAACA+GGG | - | chr2_4:9651152-9651171 | None:intergenic | 30.0% | |
| ! | AGACTGTTTGAAATAGCTTA+TGG | + | chr2_4:9651156-9651175 | Msa0314080:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCA+TGG | - | chr2_4:9651235-9651254 | None:intergenic | 30.0% |
| !! | ATCTTGTTGAATGGACTATT+TGG | + | chr2_4:9651464-9651483 | Msa0314080:CDS | 30.0% |
| ATGATATTCTTCTCAATGCT+AGG | + | chr2_4:9651662-9651681 | Msa0314080:CDS | 30.0% | |
| CATAATTCATGTCTTTCTTC+AGG | + | chr2_4:9651782-9651801 | Msa0314080:intron | 30.0% | |
| TGTCTTTCTTCAGGAAAATT+TGG | + | chr2_4:9651791-9651810 | Msa0314080:intron | 30.0% | |
| AGTACATAGCAGCAAAAATA+GGG | - | chr2_4:9651841-9651860 | None:intergenic | 30.0% | |
| AAATGCTCAAACAAAGTCAA+AGG | - | chr2_4:9651906-9651925 | None:intergenic | 30.0% | |
| TTACTAACATGAACTCAATG+AGG | + | chr2_4:9651991-9652010 | Msa0314080:CDS | 30.0% | |
| GAATAGATAATCCCAAGAAA+AGG | - | chr2_4:9652040-9652059 | None:intergenic | 30.0% | |
| ATAGTTGTGAATTCTTCATC+TGG | + | chr2_4:9652332-9652351 | Msa0314080:intron | 30.0% | |
| ! | ATTCATTGTTGCTGTGTTTT+TGG | + | chr2_4:9652571-9652590 | Msa0314080:CDS | 30.0% |
| CATAACTTTCTTCGTTAAGA+TGG | - | chr2_4:9652731-9652750 | None:intergenic | 30.0% | |
| GTGATGATTGTGTATCATAT+TGG | + | chr2_4:9652832-9652851 | Msa0314080:three_prime_UTR | 30.0% | |
| TCAAATATGCCAATTCAAAC+AGG | - | chr2_4:9652930-9652949 | None:intergenic | 30.0% | |
| ! | AATAAGCCGAAAATAGCTTT+TGG | - | chr2_4:9653021-9653040 | None:intergenic | 30.0% |
| GGTAAAGACCAATGAAATGA+TGG | - | chr2_4:9648673-9648692 | None:intergenic | 35.0% | |
| AGTCAATGTTGAAAAGGAGA+AGG | - | chr2_4:9648694-9648713 | None:intergenic | 35.0% | |
| TGAAAAGACAGACACAACTT+TGG | - | chr2_4:9648744-9648763 | None:intergenic | 35.0% | |
| AAGAAAAAGGGTTGAGAGAA+AGG | - | chr2_4:9648771-9648790 | None:intergenic | 35.0% | |
| AATATTATACCACCCACCAA+TGG | + | chr2_4:9648881-9648900 | Msa0314080:CDS | 35.0% | |
| AACAGTGGAGTCAATTATTC+TGG | + | chr2_4:9649140-9649159 | Msa0314080:intron | 35.0% | |
| ACAGTGGAGTCAATTATTCT+GGG | + | chr2_4:9649141-9649160 | Msa0314080:intron | 35.0% | |
| ! | GGGTTTTCAGCATTACATTT+TGG | + | chr2_4:9649161-9649180 | Msa0314080:CDS | 35.0% |
| !!! | CAGCATTACATTTTGGCTTT+AGG | + | chr2_4:9649168-9649187 | Msa0314080:CDS | 35.0% |
| ! | ATCAAAGGCACAAGAAATGA+AGG | - | chr2_4:9649210-9649229 | None:intergenic | 35.0% |
| TTCATTTCTTGTGCCTTTGA+TGG | + | chr2_4:9649209-9649228 | Msa0314080:CDS | 35.0% | |
| TCATTTCTTGTGCCTTTGAT+GGG | + | chr2_4:9649210-9649229 | Msa0314080:CDS | 35.0% | |
| !!! | CAGATTCTGCTTTTTGTACA+AGG | + | chr2_4:9649433-9649452 | Msa0314080:CDS | 35.0% |
| !! | TATCTGTTTACTTTAGGGCA+GGG | - | chr2_4:9649717-9649736 | None:intergenic | 35.0% |
| !! | TTATCTGTTTACTTTAGGGC+AGG | - | chr2_4:9649718-9649737 | None:intergenic | 35.0% |
| GTTAAAGACCAAGACACAAT+TGG | - | chr2_4:9649781-9649800 | None:intergenic | 35.0% | |
| ! | GTTTAGGGTTATAACGTACA+AGG | + | chr2_4:9649835-9649854 | Msa0314080:intron | 35.0% |
| ATTAGTGTTAGAACCGAGTT+TGG | + | chr2_4:9649978-9649997 | Msa0314080:intron | 35.0% | |
| AAGCTACAATTAGCCAAACT+CGG | - | chr2_4:9649994-9650013 | None:intergenic | 35.0% | |
| AATTATGGGCCATTTGTTCT+AGG | + | chr2_4:9650214-9650233 | Msa0314080:CDS | 35.0% | |
| GTTTCCTCCTATTAATTTCC+AGG | + | chr2_4:9650296-9650315 | Msa0314080:intron | 35.0% | |
| GTTCCAGTAATTGCATTATC+TGG | + | chr2_4:9650340-9650359 | Msa0314080:CDS | 35.0% | |
| ! | TGTTTCCTTTTTCTTCAGGT+TGG | + | chr2_4:9650479-9650498 | Msa0314080:intron | 35.0% |
| AATGTCCAACCTGAAGAAAA+AGG | - | chr2_4:9650487-9650506 | None:intergenic | 35.0% | |
| GTTGGACATTGTGTTGAAAT+TGG | + | chr2_4:9650497-9650516 | Msa0314080:CDS | 35.0% | |
| TGTTGTTAAGAGATGTGCAT+AGG | - | chr2_4:9650754-9650773 | None:intergenic | 35.0% | |
| TATGGAATCTTCATCCTGTA+AGG | - | chr2_4:9650994-9651013 | None:intergenic | 35.0% | |
| ! | GGTTTTCCTACATTTGATGT+TGG | + | chr2_4:9651027-9651046 | Msa0314080:CDS | 35.0% |
| ! | TTTGATGTTGGTCATGCTTT+TGG | + | chr2_4:9651039-9651058 | Msa0314080:CDS | 35.0% |
| !!! | TGTTTTGGTCTCCTTAATTG+AGG | + | chr2_4:9651074-9651093 | Msa0314080:CDS | 35.0% |
| ! | GCTATTTCAAACAGTCTAAC+AGG | - | chr2_4:9651153-9651172 | None:intergenic | 35.0% |
| ! | TTTGAAATAGCTTATGGCGA+CGG | + | chr2_4:9651162-9651181 | Msa0314080:intron | 35.0% |
| TTGTTTATCTGACAGTCAAC+TGG | + | chr2_4:9651353-9651372 | Msa0314080:intron | 35.0% | |
| GGAATTGGAATCTTGTTGAA+TGG | + | chr2_4:9651455-9651474 | Msa0314080:CDS | 35.0% | |
| AGAGTCATTCAAATTTCAGC+AGG | + | chr2_4:9651635-9651654 | Msa0314080:CDS | 35.0% | |
| ATAGCAGCAAAAATAGGGAA+GGG | - | chr2_4:9651836-9651855 | None:intergenic | 35.0% | |
| CAGTACATAGCAGCAAAAAT+AGG | - | chr2_4:9651842-9651861 | None:intergenic | 35.0% | |
| !! | ATTGTGTTTTTCAGCTTCTG+TGG | + | chr2_4:9651950-9651969 | Msa0314080:intron | 35.0% |
| !! | TTGTGTTTTTCAGCTTCTGT+GGG | + | chr2_4:9651951-9651970 | Msa0314080:intron | 35.0% |
| !! | GTGAATTCTCTGAAATACTC+AGG | - | chr2_4:9652062-9652081 | None:intergenic | 35.0% |
| TTTCAGAGAATTCACTTCCA+AGG | + | chr2_4:9652067-9652086 | Msa0314080:CDS | 35.0% | |
| ! | TGAATCTGAAATTCCACCTA+AGG | - | chr2_4:9652196-9652215 | None:intergenic | 35.0% |
| AACAATGAATGCAACAGTTG+AGG | - | chr2_4:9652561-9652580 | None:intergenic | 35.0% | |
| ACAAGAATAGCTCCAAAGAT+AGG | + | chr2_4:9652609-9652628 | Msa0314080:CDS | 35.0% | |
| CAAGAATAGCTCCAAAGATA+GGG | + | chr2_4:9652610-9652629 | Msa0314080:CDS | 35.0% | |
| AAGAATAGCTCCAAAGATAG+GGG | + | chr2_4:9652611-9652630 | Msa0314080:CDS | 35.0% | |
| ACTTTCTTCGTTAAGATGGA+GGG | - | chr2_4:9652727-9652746 | None:intergenic | 35.0% | |
| AACTTTCTTCGTTAAGATGG+AGG | - | chr2_4:9652728-9652747 | None:intergenic | 35.0% | |
| CGTCAAGAAAATATGTTGAG+AGG | + | chr2_4:9652754-9652773 | Msa0314080:three_prime_UTR | 35.0% | |
| ! | TTCTTCATGGCCTTTCTTTT+TGG | + | chr2_4:9652896-9652915 | Msa0314080:three_prime_UTR | 35.0% |
| !! | GCATGTCCAAAAGCTATTTT+CGG | + | chr2_4:9653012-9653031 | Msa0314080:three_prime_UTR | 35.0% |
| TCTCGCTTCCATCATTTCAT+TGG | + | chr2_4:9648662-9648681 | Msa0314080:five_prime_UTR | 40.0% | |
| GGAGTGAGTCAATGTTGAAA+AGG | - | chr2_4:9648700-9648719 | None:intergenic | 40.0% | |
| AAGACAGACACAACTTTGGA+GGG | - | chr2_4:9648740-9648759 | None:intergenic | 40.0% | |
| AAAGACAGACACAACTTTGG+AGG | - | chr2_4:9648741-9648760 | None:intergenic | 40.0% | |
| AAAAAGGGTTGAGAGAAAGG+TGG | - | chr2_4:9648768-9648787 | None:intergenic | 40.0% | |
| AGTACTCTATGCCATGAAGT+TGG | - | chr2_4:9648908-9648927 | None:intergenic | 40.0% | |
| CATAGATGCAAACCCTTCTT+GGG | + | chr2_4:9648929-9648948 | Msa0314080:CDS | 40.0% | |
| ATAGATGCAAACCCTTCTTG+GGG | + | chr2_4:9648930-9648949 | Msa0314080:CDS | 40.0% | |
| CACTCTCAGTGAAACCAAAA+TGG | - | chr2_4:9649099-9649118 | None:intergenic | 40.0% | |
| TCCTAGATAGAGAAGAGAGT+TGG | + | chr2_4:9649341-9649360 | Msa0314080:intron | 40.0% | |
| ACCAACTCTCTTCTCTATCT+AGG | - | chr2_4:9649345-9649364 | None:intergenic | 40.0% | |
| ACACTCTTTCAGACACTCTT+TGG | + | chr2_4:9649463-9649482 | Msa0314080:CDS | 40.0% | |
| !! | TTCAGACACTCTTTGGAACT+CGG | + | chr2_4:9649470-9649489 | Msa0314080:CDS | 40.0% |
| AACCAAATGTGGGTCTTCTA+TGG | - | chr2_4:9649572-9649591 | None:intergenic | 40.0% | |
| AAAACCATGAGAGCAGTTCA+AGG | + | chr2_4:9650144-9650163 | Msa0314080:CDS | 40.0% | |
| !! | GTTTTTCAGTCCACTTGGAA+TGG | + | chr2_4:9650318-9650337 | Msa0314080:CDS | 40.0% |
| ATTACTGGAACCATTCCAAG+TGG | - | chr2_4:9650331-9650350 | None:intergenic | 40.0% | |
| !! | GTTTTGGCCTATTTAACCGA+GGG | + | chr2_4:9650362-9650381 | Msa0314080:CDS | 40.0% |
| TGAACTATTGTCGTACCACA+GGG | - | chr2_4:9650390-9650409 | None:intergenic | 40.0% | |
| TCTTAAGTTCACCTCTTCCT+AGG | + | chr2_4:9650428-9650447 | Msa0314080:intron | 40.0% | |
| TAAAATACGAGCCTAGGAAG+AGG | - | chr2_4:9650442-9650461 | None:intergenic | 40.0% | |
| AGAAGCTAAAATACGAGCCT+AGG | - | chr2_4:9650448-9650467 | None:intergenic | 40.0% | |
| TCTGTTTGTAGCATTCTCTC+AGG | + | chr2_4:9650535-9650554 | Msa0314080:CDS | 40.0% | |
| GCACATCTCTTAACAACAAG+TGG | + | chr2_4:9650756-9650775 | Msa0314080:CDS | 40.0% | |
| TCAACAAGGTACAAACTCAC+TGG | - | chr2_4:9650939-9650958 | None:intergenic | 40.0% | |
| ! | AGATTCCATACCCTTTTGAG+TGG | + | chr2_4:9651004-9651023 | Msa0314080:CDS | 40.0% |
| !! | GATTCCATACCCTTTTGAGT+GGG | + | chr2_4:9651005-9651024 | Msa0314080:CDS | 40.0% |
| !! | ATTCCATACCCTTTTGAGTG+GGG | + | chr2_4:9651006-9651025 | Msa0314080:CDS | 40.0% |
| TAGGAAAACCCCACTCAAAA+GGG | - | chr2_4:9651017-9651036 | None:intergenic | 40.0% | |
| GCATGACCAACATCAAATGT+AGG | - | chr2_4:9651036-9651055 | None:intergenic | 40.0% | |
| GGCTCATAGTACCTCAATTA+AGG | - | chr2_4:9651088-9651107 | None:intergenic | 40.0% | |
| !! | TGAGGTACTATGAGCCTTTT+TGG | + | chr2_4:9651092-9651111 | Msa0314080:intron | 40.0% |
| AACCATGACAGAGAGAATGT+AGG | + | chr2_4:9651581-9651600 | Msa0314080:intron | 40.0% | |
| ACCATGACAGAGAGAATGTA+GGG | + | chr2_4:9651582-9651601 | Msa0314080:intron | 40.0% | |
| CATAGCAGCAAAAATAGGGA+AGG | - | chr2_4:9651837-9651856 | None:intergenic | 40.0% | |
| TGCTCAAACAAAGTCAAAGG+TGG | - | chr2_4:9651903-9651922 | None:intergenic | 40.0% | |
| !! | TGTGTTTTTCAGCTTCTGTG+GGG | + | chr2_4:9651952-9651971 | Msa0314080:intron | 40.0% |
| ATGAGGAGCCTCTTTATTAC+TGG | + | chr2_4:9652008-9652027 | Msa0314080:CDS | 40.0% | |
| GGGAAACACCAGTAATAAAG+AGG | - | chr2_4:9652019-9652038 | None:intergenic | 40.0% | |
| ! | TACTGGTGTTTCCCTTTTCT+TGG | + | chr2_4:9652025-9652044 | Msa0314080:CDS | 40.0% |
| ! | ACTGGTGTTTCCCTTTTCTT+GGG | + | chr2_4:9652026-9652045 | Msa0314080:CDS | 40.0% |
| ! | ATCTAGCCTTTGTATGAGCA+GGG | - | chr2_4:9652103-9652122 | None:intergenic | 40.0% |
| TGCTCATACAAAGGCTAGAT+GGG | + | chr2_4:9652103-9652122 | Msa0314080:CDS | 40.0% | |
| GATAGTGAGTAGTAGCCATT+TGG | - | chr2_4:9652282-9652301 | None:intergenic | 40.0% | |
| GGTGTAGAACTCTTCATTTC+TGG | - | chr2_4:9652678-9652697 | None:intergenic | 40.0% | |
| GTTAAGATGGAGGGAAAAAC+CGG | - | chr2_4:9652718-9652737 | None:intergenic | 40.0% | |
| GGCTTGTAGTCCAAAAAGAA+AGG | - | chr2_4:9652909-9652928 | None:intergenic | 40.0% | |
| GACTACAAGCCTGTTTGAAT+TGG | + | chr2_4:9652918-9652937 | Msa0314080:three_prime_UTR | 40.0% | |
| AGGGAAAGGGAAAGTAAGGT+TGG | - | chr2_4:9648721-9648740 | None:intergenic | 45.0% | |
| TTGGAGGGAAAGGGAAAGTA+AGG | - | chr2_4:9648725-9648744 | None:intergenic | 45.0% | |
| ! | GACACAACTTTGGAGGGAAA+GGG | - | chr2_4:9648734-9648753 | None:intergenic | 45.0% |
| ! | AGACACAACTTTGGAGGGAA+AGG | - | chr2_4:9648735-9648754 | None:intergenic | 45.0% |
| ! | CATGAAGTTGGTCCATTGGT+GGG | - | chr2_4:9648896-9648915 | None:intergenic | 45.0% |
| ! | ATGCCATGAAGTTGGTCCAT+TGG | - | chr2_4:9648900-9648919 | None:intergenic | 45.0% |
| GCATAGATGCAAACCCTTCT+TGG | + | chr2_4:9648928-9648947 | Msa0314080:CDS | 45.0% | |
| GTGGATACTAACCCCAAGAA+GGG | - | chr2_4:9648944-9648963 | None:intergenic | 45.0% | |
| AGTGGATACTAACCCCAAGA+AGG | - | chr2_4:9648945-9648964 | None:intergenic | 45.0% | |
| GAAAATGCAGATGAGGGAAG+TGG | - | chr2_4:9648963-9648982 | None:intergenic | 45.0% | |
| TTTCTTGTGCCTTTGATGGG+TGG | + | chr2_4:9649213-9649232 | Msa0314080:CDS | 45.0% | |
| ACATCAGTTCCACCCATCAA+AGG | - | chr2_4:9649225-9649244 | None:intergenic | 45.0% | |
| TCAGGGTGATAAAGTGAGAG+TGG | + | chr2_4:9649408-9649427 | Msa0314080:intron | 45.0% | |
| AACTCGGTTACCAACAGTGA+TGG | + | chr2_4:9649486-9649505 | Msa0314080:CDS | 45.0% | |
| ACTCGGTTACCAACAGTGAT+GGG | + | chr2_4:9649487-9649506 | Msa0314080:CDS | 45.0% | |
| ! | GGGAGGGTCTTATGCATTTA+TGG | + | chr2_4:9649507-9649526 | Msa0314080:CDS | 45.0% |
| GTCTTCTATGGAGGCCAATT+TGG | - | chr2_4:9649560-9649579 | None:intergenic | 45.0% | |
| CAAATGTGGGTCTTCTATGG+AGG | - | chr2_4:9649569-9649588 | None:intergenic | 45.0% | |
| CTCCATAGAAGACCCACATT+TGG | + | chr2_4:9649567-9649586 | Msa0314080:CDS | 45.0% | |
| !! | GTTTACTTTAGGGCAGGGTT+TGG | - | chr2_4:9649712-9649731 | None:intergenic | 45.0% |
| !! | TCCAGGTTTTTCAGTCCACT+TGG | + | chr2_4:9650313-9650332 | Msa0314080:intron | 45.0% |
| !! | TCCAAGTGGACTGAAAAACC+TGG | - | chr2_4:9650317-9650336 | None:intergenic | 45.0% |
| !! | GGTTTTGGCCTATTTAACCG+AGG | + | chr2_4:9650361-9650380 | Msa0314080:CDS | 45.0% |
| GTGAACTATTGTCGTACCAC+AGG | - | chr2_4:9650391-9650410 | None:intergenic | 45.0% | |
| TGCATAGGCCCATATCATTG+TGG | - | chr2_4:9650739-9650758 | None:intergenic | 45.0% | |
| TGGAGCAGAAGAAATGAGGT+TGG | - | chr2_4:9650835-9650854 | None:intergenic | 45.0% | |
| ACCTCATTTCTTCTGCTCCA+TGG | + | chr2_4:9650835-9650854 | Msa0314080:CDS | 45.0% | |
| ACCATGGAGCAGAAGAAATG+AGG | - | chr2_4:9650839-9650858 | None:intergenic | 45.0% | |
| AAACCCCACTCAAAAGGGTA+TGG | - | chr2_4:9651012-9651031 | None:intergenic | 45.0% | |
| GTAGGAAAACCCCACTCAAA+AGG | - | chr2_4:9651018-9651037 | None:intergenic | 45.0% | |
| ! | TGGTCATGCTTTTGGCATGA+TGG | + | chr2_4:9651047-9651066 | Msa0314080:CDS | 45.0% |
| ! | GGACTATTTGGAACACTGAC+TGG | + | chr2_4:9651476-9651495 | Msa0314080:CDS | 45.0% |
| ! | TGGAACACTGACTGGTTCAT+CGG | + | chr2_4:9651484-9651503 | Msa0314080:CDS | 45.0% |
| AGAGAGAATGTAGGGCTTCT+AGG | + | chr2_4:9651590-9651609 | Msa0314080:intron | 45.0% | |
| !! | CTTCTAGGAAGTACTCGTGT+TGG | + | chr2_4:9651605-9651624 | Msa0314080:CDS | 45.0% |
| GCTATGTACTGTGTCCTGTT+TGG | + | chr2_4:9651851-9651870 | Msa0314080:CDS | 45.0% | |
| ! | CATCTAGCCTTTGTATGAGC+AGG | - | chr2_4:9652104-9652123 | None:intergenic | 45.0% |
| CTGCTCATACAAAGGCTAGA+TGG | + | chr2_4:9652102-9652121 | Msa0314080:CDS | 45.0% | |
| CATATGCATGCACATGCCTT+AGG | + | chr2_4:9652177-9652196 | Msa0314080:intron | 45.0% | |
| ACGGAACAGTTATGCACCAT+CGG | + | chr2_4:9652400-9652419 | Msa0314080:intron | 45.0% | |
| ! | GTTCTAAACTTGGTCCACCA+TGG | - | chr2_4:9652641-9652660 | None:intergenic | 45.0% |
| AAAAACCGGTGGAGGTTGAA+AGG | - | chr2_4:9652704-9652723 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTTCATTATATAA+TGG | + | chr2_4:9649006-9649025 | Msa0314080:intron | 5.0% |
| ! | CCATGAAGTTGGTCCATTGG+TGG | - | chr2_4:9648897-9648916 | None:intergenic | 50.0% |
| CCACCAATGGACCAACTTCA+TGG | + | chr2_4:9648894-9648913 | Msa0314080:CDS | 50.0% | |
| ! | GGTTACCAACAGTGATGGGA+GGG | + | chr2_4:9649491-9649510 | Msa0314080:CDS | 50.0% |
| TAAGACCCTCCCATCACTGT+TGG | - | chr2_4:9649499-9649518 | None:intergenic | 50.0% | |
| GAGTTCGGCCAATTGTGTCT+TGG | + | chr2_4:9649770-9649789 | Msa0314080:intron | 50.0% | |
| TGCACCTTGAACTGCTCTCA+TGG | - | chr2_4:9650151-9650170 | None:intergenic | 50.0% | |
| CAGGGAACCCTCGGTTAAAT+AGG | - | chr2_4:9650372-9650391 | None:intergenic | 50.0% | |
| ATTTAACCGAGGGTTCCCTG+TGG | + | chr2_4:9650372-9650391 | Msa0314080:CDS | 50.0% | |
| ! | TGGCATGATGGTCGCTGTTT+TGG | + | chr2_4:9651059-9651078 | Msa0314080:CDS | 50.0% |
| GCCCTACATTCTCTCTGTCA+TGG | - | chr2_4:9651586-9651605 | None:intergenic | 50.0% | |
| !! | TGTGTCCTGTTTGGCCTTGT+TGG | + | chr2_4:9651860-9651879 | Msa0314080:CDS | 50.0% |
| ACTCACCAACAAGGCCAAAC+AGG | - | chr2_4:9651868-9651887 | None:intergenic | 50.0% | |
| TTCACTTCCAAGGCCCTTCA+TGG | + | chr2_4:9652077-9652096 | Msa0314080:CDS | 50.0% | |
| TGTATGAGCAGGGCCATGAA+GGG | - | chr2_4:9652093-9652112 | None:intergenic | 50.0% | |
| TTGTATGAGCAGGGCCATGA+AGG | - | chr2_4:9652094-9652113 | None:intergenic | 50.0% | |
| TCATGGCCCTGCTCATACAA+AGG | + | chr2_4:9652094-9652113 | Msa0314080:CDS | 50.0% | |
| ATGCATGCACATGCCTTAGG+TGG | + | chr2_4:9652180-9652199 | Msa0314080:intron | 50.0% | |
| !! | GCACCATCGGTTTCTACTTG+TGG | + | chr2_4:9652413-9652432 | Msa0314080:intron | 50.0% |
| CCACCACAAGTAGAAACCGA+TGG | - | chr2_4:9652419-9652438 | None:intergenic | 50.0% | |
| !! | CCATCGGTTTCTACTTGTGG+TGG | + | chr2_4:9652416-9652435 | Msa0314080:intron | 50.0% |
| CCATGGCATTCCCCTATCTT+TGG | - | chr2_4:9652624-9652643 | None:intergenic | 50.0% | |
| CCAAAGATAGGGGAATGCCA+TGG | + | chr2_4:9652621-9652640 | Msa0314080:CDS | 50.0% | |
| AAGATAGGGGAATGCCATGG+TGG | + | chr2_4:9652624-9652643 | Msa0314080:CDS | 50.0% | |
| AAGATGGAGGGAAAAACCGG+TGG | - | chr2_4:9652715-9652734 | None:intergenic | 50.0% | |
| ! | GAAGTTGGTCCATTGGTGGG+TGG | - | chr2_4:9648893-9648912 | None:intergenic | 55.0% |
| ! | CGGTTACCAACAGTGATGGG+AGG | + | chr2_4:9649490-9649509 | Msa0314080:CDS | 55.0% |
| CCGGTGGAGGTTGAAAGGAA+GGG | - | chr2_4:9652699-9652718 | None:intergenic | 55.0% | |
| CCCTTCCTTTCAACCTCCAC+CGG | + | chr2_4:9652696-9652715 | Msa0314080:CDS | 55.0% | |
| ACCGGTGGAGGTTGAAAGGA+AGG | - | chr2_4:9652700-9652719 | None:intergenic | 55.0% | |
| ATGGAGGGAAAAACCGGTGG+AGG | - | chr2_4:9652712-9652731 | None:intergenic | 55.0% | |
| GTCGTACCACAGGGAACCCT+CGG | - | chr2_4:9650381-9650400 | None:intergenic | 60.0% | |
| GAGCATACACAGCTGCGTCC+CGG | + | chr2_4:9651375-9651394 | Msa0314080:CDS | 60.0% | |
| !! | CGGTGTTGCACTTGCTAGCC+GGG | - | chr2_4:9651396-9651415 | None:intergenic | 60.0% |
| !! | GCGGTGTTGCACTTGCTAGC+CGG | - | chr2_4:9651397-9651416 | None:intergenic | 60.0% |
| CTCAGAACATGAGGAGGCGG+CGG | - | chr2_4:9651416-9651435 | None:intergenic | 60.0% | |
| CGGCTCAGAACATGAGGAGG+CGG | - | chr2_4:9651419-9651438 | None:intergenic | 60.0% | |
| ! | CCTCCTCATGTTCTGAGCCG+CGG | + | chr2_4:9651419-9651438 | Msa0314080:CDS | 60.0% |
| ACACCGCGGCTCAGAACATG+AGG | - | chr2_4:9651425-9651444 | None:intergenic | 60.0% | |
| ! | CATGTTCTGAGCCGCGGTGT+TGG | + | chr2_4:9651425-9651444 | Msa0314080:CDS | 60.0% |
| !! | GGTGTTGGCTGGCAGGGAAT+TGG | + | chr2_4:9651440-9651459 | Msa0314080:CDS | 60.0% |
| CCGCGGCTCAGAACATGAGG+AGG | - | chr2_4:9651422-9651441 | None:intergenic | 65.0% | |
| !! | TTCTGAGCCGCGGTGTTGGC+TGG | + | chr2_4:9651429-9651448 | Msa0314080:CDS | 65.0% |
| TTCCCTGCCAGCCAACACCG+CGG | - | chr2_4:9651439-9651458 | None:intergenic | 65.0% | |
| AGCAGGGCCATGAAGGGCCT+TGG | - | chr2_4:9652087-9652106 | None:intergenic | 65.0% | |
| !! | AGCCGCGGTGTTGGCTGGCA+GGG | + | chr2_4:9651434-9651453 | Msa0314080:CDS | 70.0% |
| !! | GAGCCGCGGTGTTGGCTGGC+AGG | + | chr2_4:9651433-9651452 | Msa0314080:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 9648633 | 9653057 | 9648633 | ID=Msa0314080;Name=Msa0314080 |
| chr2_4 | mRNA | 9648633 | 9653057 | 9648633 | ID=Msa0314080-mRNA-1;Parent=Msa0314080;Name=Msa0314080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=225|1|1|1|1|1|13|321|525 |
| chr2_4 | exon | 9648633 | 9648951 | 9648633 | ID=Msa0314080-mRNA-1:exon:3712;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9649145 | 9649242 | 9649145 | ID=Msa0314080-mRNA-1:exon:3713;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9649412 | 9649588 | 9649412 | ID=Msa0314080-mRNA-1:exon:3714;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9650135 | 9650235 | 9650135 | ID=Msa0314080-mRNA-1:exon:3715;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9650318 | 9650393 | 9650318 | ID=Msa0314080-mRNA-1:exon:3716;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9650497 | 9650556 | 9650497 | ID=Msa0314080-mRNA-1:exon:3717;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9650672 | 9650856 | 9650672 | ID=Msa0314080-mRNA-1:exon:3718;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9650999 | 9651095 | 9650999 | ID=Msa0314080-mRNA-1:exon:3719;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9651368 | 9651513 | 9651368 | ID=Msa0314080-mRNA-1:exon:3720;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9651592 | 9651683 | 9651592 | ID=Msa0314080-mRNA-1:exon:3721;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9651804 | 9651881 | 9651804 | ID=Msa0314080-mRNA-1:exon:3722;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9651964 | 9652124 | 9651964 | ID=Msa0314080-mRNA-1:exon:3723;Parent=Msa0314080-mRNA-1 |
| chr2_4 | exon | 9652524 | 9653057 | 9652524 | ID=Msa0314080-mRNA-1:exon:3724;Parent=Msa0314080-mRNA-1 |
| chr2_4 | five_prime_UTR | 9648633 | 9648857 | 9648633 | ID=Msa0314080-mRNA-1:five_prime_utr;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9648858 | 9648951 | 9648858 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9649145 | 9649242 | 9649145 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9649412 | 9649588 | 9649412 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9650135 | 9650235 | 9650135 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9650318 | 9650393 | 9650318 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9650497 | 9650556 | 9650497 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9650672 | 9650856 | 9650672 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9650999 | 9651095 | 9650999 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9651368 | 9651513 | 9651368 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9651592 | 9651683 | 9651592 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9651804 | 9651881 | 9651804 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9651964 | 9652124 | 9651964 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | CDS | 9652524 | 9652736 | 9652524 | ID=Msa0314080-mRNA-1:cds;Parent=Msa0314080-mRNA-1 |
| chr2_4 | three_prime_UTR | 9652737 | 9653057 | 9652737 | ID=Msa0314080-mRNA-1:three_prime_utr;Parent=Msa0314080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
