Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390460 | GAU21273.1 | 57.276 | 646 | 221 | 5 | 107 | 710 | 817 | 1449 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390460 | sp|O00370|LORF2_HUMAN | 29.700 | 367 | 243 | 8 | 75 | 435 | 472 | 829 | 3.00e-30 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390460 | A0A2Z6LVM6 | 57.276 | 646 | 221 | 5 | 107 | 710 | 817 | 1449 | 0.0 | 707 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0390460 | 0.807831 | 4.171805e-50 | -8.615850e-47 |
| Msa0017120 | Msa0390460 | 0.829738 | 4.350451e-55 | -8.615850e-47 |
| Msa0030000 | Msa0390460 | 0.810841 | 9.432023e-51 | -8.615850e-47 |
| Msa0047470 | Msa0390460 | 0.800055 | 1.724255e-48 | -8.615850e-47 |
| Msa0050430 | Msa0390460 | 0.812588 | 3.930845e-51 | -8.615850e-47 |
| Msa0065390 | Msa0390460 | 0.810919 | 9.071064e-51 | -8.615850e-47 |
| Msa0079250 | Msa0390460 | 0.840090 | 1.071746e-57 | -8.615850e-47 |
| Msa0083160 | Msa0390460 | 0.805384 | 1.370171e-49 | -8.615850e-47 |
| Msa0089210 | Msa0390460 | 0.803522 | 3.348255e-49 | -8.615850e-47 |
| Msa0110710 | Msa0390460 | 0.808254 | 3.390103e-50 | -8.615850e-47 |
| Msa0125230 | Msa0390460 | 0.803230 | 3.849779e-49 | -8.615850e-47 |
| Msa0126900 | Msa0390460 | 0.801568 | 8.466711e-49 | -8.615850e-47 |
| Msa0168100 | Msa0390460 | 0.802445 | 5.590334e-49 | -8.615850e-47 |
| Msa0172350 | Msa0390460 | 0.816104 | 6.569000e-52 | -8.615850e-47 |
| Msa0185390 | Msa0390460 | 0.815374 | 9.553200e-52 | -8.615850e-47 |
| Msa0207000 | Msa0390460 | 0.810844 | 9.419052e-51 | -8.615850e-47 |
| Msa0223100 | Msa0390460 | 0.801606 | 8.315893e-49 | -8.615850e-47 |
| Msa0223290 | Msa0390460 | 0.816988 | 4.163124e-52 | -8.615850e-47 |
| Msa0223380 | Msa0390460 | 0.800447 | 1.434896e-48 | -8.615850e-47 |
| Msa0377530 | Msa0390460 | 0.813432 | 2.567713e-51 | -8.615850e-47 |
| Msa0390460 | Msa0392070 | 0.801241 | 9.880717e-49 | -8.615850e-47 |
| Msa0390460 | Msa0411250 | 0.813271 | 2.784966e-51 | -8.615850e-47 |
| Msa0390460 | Msa0437710 | 0.803995 | 2.671814e-49 | -8.615850e-47 |
| Msa0390460 | Msa0442880 | 0.801279 | 9.706279e-49 | -8.615850e-47 |
| Msa0390460 | Msa0482680 | 0.814099 | 1.830511e-51 | -8.615850e-47 |
| Msa0390460 | Msa0490300 | 0.828359 | 9.391647e-55 | -8.615850e-47 |
| Msa0390460 | Msa0490350 | 0.829335 | 5.453973e-55 | -8.615850e-47 |
| Msa0390460 | Msa0508200 | 0.815560 | 8.685401e-52 | -8.615850e-47 |
| Msa0390460 | Msa0509970 | 0.803323 | 3.683053e-49 | -8.615850e-47 |
| Msa0390460 | Msa0511890 | 0.803713 | 3.056834e-49 | -8.615850e-47 |
| Msa0390460 | Msa0517490 | 0.818824 | 1.602216e-52 | -8.615850e-47 |
| Msa0390460 | Msa0526700 | 0.803980 | 2.690145e-49 | -8.615850e-47 |
| Msa0390460 | Msa0526710 | 0.816857 | 4.455055e-52 | -8.615850e-47 |
| Msa0390460 | Msa0535030 | 0.805111 | 1.562790e-49 | -8.615850e-47 |
| Msa0390460 | Msa0535060 | 0.810819 | 9.533483e-51 | -8.615850e-47 |
| Msa0390460 | Msa0550630 | 0.800698 | 1.275674e-48 | -8.615850e-47 |
| Msa0390460 | Msa0598250 | 0.811440 | 6.994934e-51 | -8.615850e-47 |
| Msa0390460 | Msa0606060 | 0.805151 | 1.533141e-49 | -8.615850e-47 |
| Msa0390460 | Msa0607300 | 0.803873 | 2.832256e-49 | -8.615850e-47 |
| Msa0390460 | Msa0642650 | 0.800351 | 1.501175e-48 | -8.615850e-47 |
| Msa0390460 | Msa0681890 | 0.823049 | 1.706975e-53 | -8.615850e-47 |
| Msa0390460 | Msa0686610 | 0.818408 | 1.991002e-52 | -8.615850e-47 |
| Msa0390460 | Msa0707780 | 0.810249 | 1.266083e-50 | -8.615850e-47 |
| Msa0390460 | Msa0719340 | 0.804123 | 2.512283e-49 | -8.615850e-47 |
| Msa0390460 | Msa0726610 | 0.807906 | 4.020141e-50 | -8.615850e-47 |
| Msa0390460 | Msa0733000 | 0.800542 | 1.372449e-48 | -8.615850e-47 |
| Msa0390460 | Msa0770430 | 0.813112 | 3.018424e-51 | -8.615850e-47 |
| Msa0390460 | Msa0772150 | 0.801505 | 8.723284e-49 | -8.615850e-47 |
| Msa0390460 | Msa0812660 | 0.821127 | 4.763785e-53 | -8.615850e-47 |
| Msa0390460 | Msa0890250 | 0.803466 | 3.439835e-49 | -8.615850e-47 |
| Msa0390460 | Msa0907700 | 0.813227 | 2.847833e-51 | -8.615850e-47 |
| Msa0390460 | Msa0925160 | 0.818884 | 1.552806e-52 | -8.615850e-47 |
| Msa0390460 | Msa0935730 | 0.804842 | 1.779124e-49 | -8.615850e-47 |
| Msa0390460 | Msa0955260 | 0.813931 | 1.994032e-51 | -8.615850e-47 |
| Msa0390460 | Msa0958020 | 0.832576 | 8.738931e-56 | -8.615850e-47 |
| Msa0390460 | Msa0971860 | 0.812321 | 4.496184e-51 | -8.615850e-47 |
| Msa0390460 | Msa0990520 | 0.810852 | 9.381944e-51 | -8.615850e-47 |
| Msa0390460 | Msa1015060 | 0.820997 | 5.103382e-53 | -8.615850e-47 |
| Msa0390460 | Msa1044040 | 0.800684 | 1.283841e-48 | -8.615850e-47 |
| Msa0390460 | Msa1056640 | 0.811076 | 8.390209e-51 | -8.615850e-47 |
| Msa0390460 | Msa1092820 | 0.826669 | 2.388987e-54 | -8.615850e-47 |
| Msa0390460 | Msa1097380 | 0.816973 | 4.195881e-52 | -8.615850e-47 |
| Msa0390460 | Msa1097430 | 0.805167 | 1.521032e-49 | -8.615850e-47 |
| Msa0390460 | Msa1119720 | 0.806300 | 8.795539e-50 | -8.615850e-47 |
| Msa0390460 | Msa1157920 | 0.803583 | 3.252616e-49 | -8.615850e-47 |
| Msa0390460 | Msa1223840 | 0.810234 | 1.275648e-50 | -8.615850e-47 |
| Msa0390460 | Msa1237030 | 0.804809 | 1.807446e-49 | -8.615850e-47 |
| Msa0390460 | Msa1238410 | 0.803035 | 4.224999e-49 | -8.615850e-47 |
| Msa0390460 | Msa1250670 | 0.801291 | 9.652159e-49 | -8.615850e-47 |
| Msa0390460 | Msa1265070 | 0.817858 | 2.650914e-52 | -8.615850e-47 |
| Msa0390460 | Msa1325980 | 0.807611 | 4.644777e-50 | -8.615850e-47 |
| Msa0390460 | Msa1373510 | 0.808945 | 2.413740e-50 | -8.615850e-47 |
| Msa0390460 | Msa1381130 | 0.816030 | 6.822047e-52 | -8.615850e-47 |
| Msa0390460 | Msa1390310 | 0.819509 | 1.119164e-52 | -8.615850e-47 |
| Msa0390460 | Msa1412080 | 0.833764 | 4.421523e-56 | -8.615850e-47 |
| Msa0390460 | Msa1418200 | 0.802895 | 4.515567e-49 | -8.615850e-47 |
| Msa0390460 | Msa1432640 | 0.836855 | 7.326089e-57 | -8.615850e-47 |
| Msa0390460 | Msa1456650 | 0.810484 | 1.126718e-50 | -8.615850e-47 |
| Msa0267760 | Msa0390460 | 0.814040 | 1.886289e-51 | -8.615850e-47 |
| Msa0302650 | Msa0390460 | 0.802376 | 5.776218e-49 | -8.615850e-47 |
| Msa0328210 | Msa0390460 | 0.801501 | 8.742144e-49 | -8.615850e-47 |
| Msa0336270 | Msa0390460 | 0.801648 | 8.153872e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390460 | MtrunA17_Chr4g0023831 | 48.985 | 739 | 248 | 7 | 107 | 718 | 1008 | 1744 | 0.0 | 653 |
| Msa0390460 | MtrunA17_Chr4g0020731 | 62.458 | 594 | 161 | 6 | 107 | 641 | 120 | 710 | 0.0 | 650 |
| Msa0390460 | MtrunA17_Chr3g0085761 | 62.552 | 478 | 169 | 5 | 107 | 577 | 295 | 769 | 0.0 | 561 |
| Msa0390460 | MtrunA17_Chr8g0359381 | 45.198 | 708 | 255 | 12 | 142 | 720 | 274 | 977 | 2.63e-171 | 517 |
| Msa0390460 | MtrunA17_Chr6g0452011 | 74.622 | 331 | 83 | 1 | 107 | 436 | 120 | 450 | 2.15e-170 | 497 |
| Msa0390460 | MtrunA17_Chr5g0431011 | 45.455 | 616 | 222 | 6 | 217 | 720 | 1 | 614 | 3.87e-157 | 468 |
| Msa0390460 | MtrunA17_Chr3g0085661 | 46.927 | 537 | 219 | 9 | 217 | 721 | 1 | 503 | 4.46e-143 | 428 |
| Msa0390460 | MtrunA17_Chr8g0341191 | 36.640 | 756 | 320 | 12 | 93 | 703 | 83 | 824 | 1.15e-137 | 425 |
| Msa0390460 | MtrunA17_Chr4g0019431 | 53.283 | 396 | 117 | 4 | 392 | 721 | 3 | 396 | 3.02e-131 | 394 |
| Msa0390460 | MtrunA17_Chr3g0131371 | 41.829 | 514 | 170 | 5 | 334 | 720 | 1 | 512 | 2.73e-116 | 359 |
| Msa0390460 | MtrunA17_Chr2g0296731 | 40.147 | 543 | 192 | 6 | 279 | 721 | 1 | 510 | 1.08e-115 | 358 |
| Msa0390460 | MtrunA17_Chr6g0469141 | 68.803 | 234 | 73 | 0 | 195 | 428 | 1 | 234 | 1.45e-108 | 330 |
| Msa0390460 | MtrunA17_Chr4g0075191 | 48.138 | 349 | 178 | 2 | 93 | 439 | 52 | 399 | 1.59e-103 | 332 |
| Msa0390460 | MtrunA17_Chr5g0411291 | 36.505 | 578 | 259 | 9 | 171 | 710 | 109 | 616 | 2.13e-101 | 329 |
| Msa0390460 | MtrunA17_Chr4g0002791 | 42.857 | 455 | 161 | 6 | 279 | 637 | 1 | 452 | 3.08e-99 | 313 |
| Msa0390460 | MtrunA17_Chr5g0430981 | 61.905 | 252 | 63 | 2 | 501 | 721 | 1 | 250 | 4.97e-99 | 305 |
| Msa0390460 | MtrunA17_Chr5g0430681 | 75.658 | 152 | 37 | 0 | 107 | 258 | 13 | 164 | 1.07e-76 | 243 |
| Msa0390460 | MtrunA17_Chr5g0430691 | 66.871 | 163 | 54 | 0 | 279 | 441 | 1 | 163 | 5.59e-69 | 230 |
| Msa0390460 | MtrunA17_Chr5g0430691 | 34.956 | 226 | 107 | 2 | 514 | 699 | 117 | 342 | 1.60e-34 | 135 |
| Msa0390460 | MtrunA17_Chr2g0306281 | 39.091 | 330 | 194 | 5 | 111 | 435 | 45 | 372 | 1.93e-62 | 218 |
| Msa0390460 | MtrunA17_Chr1g0179291 | 41.096 | 292 | 138 | 4 | 461 | 720 | 72 | 361 | 5.24e-62 | 211 |
| Msa0390460 | MtrunA17_Chr6g0450501 | 35.159 | 347 | 219 | 3 | 90 | 435 | 84 | 425 | 6.97e-61 | 216 |
| Msa0390460 | MtrunA17_Chr4g0030211 | 55.319 | 188 | 49 | 3 | 501 | 657 | 1 | 184 | 1.39e-58 | 196 |
| Msa0390460 | MtrunA17_Chr4g0006871 | 33.634 | 333 | 213 | 3 | 107 | 435 | 489 | 817 | 3.29e-56 | 208 |
| Msa0390460 | MtrunA17_Chr7g0250341 | 53.049 | 164 | 77 | 0 | 130 | 293 | 2 | 165 | 1.76e-55 | 187 |
| Msa0390460 | MtrunA17_Chr5g0415281 | 67.683 | 164 | 45 | 2 | 1 | 157 | 1 | 163 | 1.39e-54 | 186 |
| Msa0390460 | MtrunA17_Chr3g0092551 | 87.629 | 97 | 12 | 0 | 3 | 99 | 19 | 115 | 2.97e-54 | 182 |
| Msa0390460 | MtrunA17_Chr4g0029891 | 38.754 | 289 | 144 | 2 | 461 | 718 | 58 | 344 | 4.38e-54 | 189 |
| Msa0390460 | MtrunA17_Chr6g0479961 | 77.193 | 114 | 26 | 0 | 324 | 437 | 1 | 114 | 6.90e-53 | 178 |
| Msa0390460 | MtrunA17_Chr8g0357281 | 32.530 | 332 | 218 | 3 | 107 | 435 | 107 | 435 | 2.70e-51 | 191 |
| Msa0390460 | MtrunA17_Chr8g0363541 | 39.858 | 281 | 76 | 2 | 324 | 511 | 1 | 281 | 3.99e-49 | 174 |
| Msa0390460 | MtrunA17_Chr6g0488181 | 60.390 | 154 | 51 | 3 | 324 | 470 | 1 | 151 | 1.25e-48 | 169 |
| Msa0390460 | MtrunA17_Chr6g0475501 | 90.909 | 99 | 9 | 0 | 1 | 99 | 1 | 99 | 1.46e-48 | 166 |
| Msa0390460 | MtrunA17_Chr2g0332521 | 32.603 | 365 | 236 | 6 | 75 | 435 | 28 | 386 | 8.87e-48 | 182 |
| Msa0390460 | MtrunA17_Chr8g0392081 | 34.393 | 346 | 153 | 8 | 279 | 559 | 1 | 337 | 1.61e-46 | 170 |
| Msa0390460 | MtrunA17_Chr4g0058441 | 29.336 | 467 | 238 | 16 | 331 | 718 | 5 | 458 | 2.60e-46 | 171 |
| Msa0390460 | MtrunA17_Chr1g0213191 | 85.714 | 98 | 14 | 0 | 2 | 99 | 3 | 100 | 3.89e-46 | 159 |
| Msa0390460 | MtrunA17_Chr7g0273511 | 35.821 | 268 | 124 | 2 | 456 | 692 | 7 | 257 | 4.60e-43 | 156 |
| Msa0390460 | MtrunA17_Chr2g0295751 | 36.752 | 234 | 115 | 2 | 519 | 721 | 246 | 477 | 6.35e-41 | 156 |
| Msa0390460 | MtrunA17_Chr1g0209241 | 41.420 | 169 | 97 | 1 | 107 | 273 | 41 | 209 | 2.31e-39 | 145 |
| Msa0390460 | MtrunA17_Chr2g0333651 | 62.000 | 100 | 38 | 0 | 622 | 721 | 32 | 131 | 5.73e-39 | 140 |
| Msa0390460 | MtrunA17_Chr4g0031641 | 37.849 | 251 | 110 | 5 | 514 | 721 | 51 | 298 | 1.36e-38 | 145 |
| Msa0390460 | MtrunA17_Chr4g0031641 | 64.762 | 105 | 35 | 1 | 345 | 449 | 1 | 103 | 8.64e-37 | 140 |
| Msa0390460 | MtrunA17_Chr5g0408771 | 39.691 | 194 | 109 | 2 | 105 | 290 | 171 | 364 | 1.64e-36 | 142 |
| Msa0390460 | MtrunA17_Chr5g0446781 | 45.963 | 161 | 85 | 1 | 461 | 621 | 23 | 181 | 1.97e-36 | 136 |
| Msa0390460 | MtrunA17_Chr1g0162511 | 29.644 | 253 | 175 | 3 | 189 | 440 | 6 | 256 | 4.06e-32 | 130 |
| Msa0390460 | MtrunA17_Chr6g0480701 | 33.471 | 242 | 159 | 2 | 189 | 429 | 5 | 245 | 4.44e-31 | 130 |
| Msa0390460 | MtrunA17_Chr1g0163851 | 38.824 | 170 | 72 | 2 | 583 | 720 | 8 | 177 | 1.24e-30 | 118 |
| Msa0390460 | MtrunA17_Chr7g0255341 | 38.824 | 170 | 73 | 2 | 583 | 721 | 2 | 171 | 3.19e-30 | 117 |
| Msa0390460 | MtrunA17_Chr6g0469751 | 46.939 | 147 | 76 | 1 | 464 | 610 | 64 | 208 | 2.61e-29 | 115 |
| Msa0390460 | MtrunA17_Chr2g0295981 | 41.667 | 120 | 67 | 1 | 114 | 230 | 12 | 131 | 5.28e-28 | 109 |
| Msa0390460 | MtrunA17_Chr7g0231281 | 47.414 | 116 | 59 | 1 | 501 | 616 | 1 | 114 | 7.94e-27 | 108 |
| Msa0390460 | MtrunA17_Chr4g0064991 | 34.222 | 225 | 77 | 6 | 432 | 619 | 34 | 224 | 4.71e-24 | 102 |
| Msa0390460 | MtrunA17_Chr3g0099521 | 41.732 | 127 | 67 | 3 | 484 | 607 | 2 | 124 | 1.54e-22 | 94.4 |
| Msa0390460 | MtrunA17_Chr8g0381211 | 29.808 | 312 | 136 | 8 | 437 | 668 | 91 | 399 | 2.99e-21 | 97.8 |
| Msa0390460 | MtrunA17_Chr5g0418601 | 40.385 | 104 | 62 | 0 | 617 | 720 | 29 | 132 | 8.64e-21 | 89.0 |
| Msa0390460 | MtrunA17_Chr8g0374951 | 27.007 | 274 | 161 | 6 | 107 | 374 | 97 | 337 | 2.14e-20 | 93.2 |
| Msa0390460 | MtrunA17_Chr8g0352741 | 26.578 | 301 | 174 | 6 | 461 | 720 | 39 | 333 | 2.49e-20 | 93.2 |
| Msa0390460 | MtrunA17_Chr4g0030201 | 41.284 | 109 | 64 | 0 | 613 | 721 | 25 | 133 | 3.56e-20 | 87.0 |
| Msa0390460 | MtrunA17_Chr3g0139931 | 34.286 | 175 | 99 | 6 | 451 | 616 | 11 | 178 | 6.03e-20 | 91.7 |
| Msa0390460 | MtrunA17_Chr3g0143071 | 28.839 | 267 | 144 | 5 | 466 | 692 | 3 | 263 | 7.63e-20 | 90.1 |
| Msa0390460 | MtrunA17_Chr5g0422851 | 41.584 | 101 | 59 | 0 | 620 | 720 | 28 | 128 | 3.44e-18 | 81.3 |
| Msa0390460 | MtrunA17_Chr5g0423361 | 26.471 | 204 | 148 | 2 | 235 | 437 | 6 | 208 | 5.27e-18 | 88.6 |
| Msa0390460 | MtrunA17_Chr5g0423411 | 28.966 | 290 | 164 | 5 | 467 | 718 | 228 | 513 | 8.73e-18 | 87.4 |
| Msa0390460 | MtrunA17_Chr3g0129951 | 35.000 | 100 | 65 | 0 | 620 | 719 | 32 | 131 | 2.99e-17 | 79.0 |
| Msa0390460 | MtrunA17_Chr1g0171261 | 33.333 | 195 | 104 | 9 | 440 | 616 | 40 | 226 | 3.33e-17 | 82.8 |
| Msa0390460 | MtrunA17_Chr3g0112591 | 65.385 | 52 | 18 | 0 | 622 | 673 | 37 | 88 | 6.77e-17 | 76.3 |
| Msa0390460 | MtrunA17_Chr8g0354181 | 26.423 | 246 | 135 | 7 | 510 | 714 | 5 | 245 | 3.49e-16 | 80.1 |
| Msa0390460 | MtrunA17_Chr8g0336101 | 29.500 | 200 | 101 | 5 | 543 | 704 | 10 | 207 | 7.51e-16 | 77.4 |
| Msa0390460 | MtrunA17_Chr5g0415141 | 37.594 | 133 | 65 | 2 | 580 | 712 | 17 | 131 | 1.13e-15 | 74.7 |
| Msa0390460 | MtrunA17_Chr1g0168141 | 34.167 | 120 | 74 | 1 | 535 | 654 | 16 | 130 | 2.19e-15 | 73.6 |
| Msa0390460 | MtrunA17_Chr1g0166231 | 59.016 | 61 | 18 | 1 | 144 | 204 | 12 | 65 | 3.36e-15 | 70.9 |
| Msa0390460 | MtrunA17_Chr8g0356521 | 42.342 | 111 | 57 | 2 | 471 | 581 | 1 | 104 | 3.69e-15 | 73.6 |
| Msa0390460 | MtrunA17_Chr5g0405261 | 74.359 | 39 | 10 | 0 | 683 | 721 | 35 | 73 | 1.34e-13 | 66.2 |
| Msa0390460 | MtrunA17_Chr7g0231291 | 92.308 | 39 | 3 | 0 | 399 | 437 | 324 | 362 | 2.97e-13 | 72.0 |
| Msa0390460 | MtrunA17_Chr7g0247411 | 47.727 | 88 | 40 | 2 | 559 | 640 | 87 | 174 | 3.43e-13 | 68.9 |
| Msa0390460 | MtrunA17_Chr6g0464471 | 37.662 | 77 | 48 | 0 | 644 | 720 | 56 | 132 | 1.61e-12 | 65.5 |
| Msa0390460 | MtrunA17_Chr7g0228391 | 42.593 | 54 | 31 | 0 | 667 | 720 | 5 | 58 | 2.07e-12 | 62.8 |
| Msa0390460 | MtrunA17_Chr3g0086231 | 65.217 | 46 | 16 | 0 | 106 | 151 | 82 | 127 | 3.77e-12 | 64.3 |
| Msa0390460 | MtrunA17_Chr8g0352271 | 33.939 | 165 | 95 | 4 | 461 | 616 | 20 | 179 | 6.57e-12 | 65.5 |
| Msa0390460 | MtrunA17_Chr3g0110641 | 32.222 | 90 | 61 | 0 | 622 | 711 | 24 | 113 | 1.95e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390460 | AT3G24255.7 | 30.464 | 151 | 97 | 3 | 300 | 447 | 7 | 152 | 1.08e-13 | 75.5 |
| Msa0390460 | AT3G24255.4 | 30.464 | 151 | 97 | 3 | 300 | 447 | 7 | 152 | 2.50e-13 | 73.6 |
| Msa0390460 | AT3G24255.5 | 30.464 | 151 | 97 | 3 | 300 | 447 | 7 | 152 | 2.50e-13 | 73.6 |
Find 220 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATCCCATTTATGTATT+TGG | 0.093322 | 3_2:-1375827 | Msa0390460:CDS |
| CGGTGGCTATTTCCCCTTTA+TGG | 0.120014 | 3_2:-1374917 | Msa0390460:CDS |
| TCTATCCCATTTATGTATTT+GGG | 0.159351 | 3_2:-1375826 | Msa0390460:CDS |
| TCCCTACTCTTTGGCGAAAA+TGG | 0.180065 | 3_2:-1376266 | Msa0390460:CDS |
| GGCAACCCCAAATACATAAA+TGG | 0.198349 | 3_2:+1375820 | None:intergenic |
| CAGGGTGGGTGGGGTGTTGA+TGG | 0.207995 | 3_2:-1375140 | Msa0390460:CDS |
| ATCAGTGTCTGATATGTTTC+AGG | 0.208365 | 3_2:-1375159 | Msa0390460:CDS |
| TTCTCAGTCTGCTTTCATTA+AGG | 0.209209 | 3_2:-1376445 | Msa0390460:CDS |
| ATAATGCTTTGTTAGGAAAA+TGG | 0.212778 | 3_2:-1375460 | Msa0390460:intron |
| TGGGTGGATGGCTGGCTTGG+TGG | 0.223628 | 3_2:-1375239 | Msa0390460:CDS |
| TCAAATTCTAGATGGTATTT+TGG | 0.225277 | 3_2:-1376418 | Msa0390460:CDS |
| AGGAGGAGATGTTGGGGTTG+GGG | 0.225329 | 3_2:-1375079 | Msa0390460:CDS |
| TTGGTTAATAATTTGTTTAC+TGG | 0.227764 | 3_2:-1376084 | Msa0390460:CDS |
| ATGCCCGTCGATTGTCGTTT+TGG | 0.235540 | 3_2:-1375786 | Msa0390460:CDS |
| GCGTACGATTCCATTGATTT+TGG | 0.243534 | 3_2:-1376321 | Msa0390460:CDS |
| GAGGAGGAGATGTTGGGGTT+GGG | 0.245898 | 3_2:-1375080 | Msa0390460:CDS |
| CCAACTGATGAGTTCTCTTT+GGG | 0.248945 | 3_2:-1376192 | Msa0390460:CDS |
| AGATGAGGTGATGTTGAAAA+TGG | 0.253479 | 3_2:-1376292 | Msa0390460:CDS |
| GAAGTTGAAACATTTATCTT+TGG | 0.266599 | 3_2:-1375722 | Msa0390460:CDS |
| TACCTTGCTATTGCAATTGA+TGG | 0.270957 | 3_2:+1377565 | None:intergenic |
| TCCAACTGATGAGTTCTCTT+TGG | 0.274938 | 3_2:-1376193 | Msa0390460:CDS |
| GTGTGGGAGGAGGAGATGTT+GGG | 0.287934 | 3_2:-1375086 | Msa0390460:CDS |
| GCTCAATTATTCAGGCTATA+TGG | 0.298191 | 3_2:-1374602 | Msa0390460:CDS |
| GCTTAGTCCGTTTGCCATCT+TGG | 0.299371 | 3_2:-1374421 | Msa0390460:CDS |
| TGATATTCGGTGAGAAATCT+TGG | 0.308300 | 3_2:-1375999 | Msa0390460:CDS |
| GCAGATGATACTTTGATATT+CGG | 0.308392 | 3_2:-1376012 | Msa0390460:CDS |
| GGAACATCTTTATGCCATAA+AGG | 0.310756 | 3_2:+1374903 | None:intergenic |
| TGCCGCTAAGAGAAACAAAA+AGG | 0.317237 | 3_2:+1376137 | None:intergenic |
| TAACTTCTCAAAGAGTCTTT+TGG | 0.318717 | 3_2:-1375914 | Msa0390460:CDS |
| TGTGTGGGAGGAGGAGATGT+TGG | 0.328072 | 3_2:-1375087 | Msa0390460:CDS |
| ATATTCATGGTCTTTGGTAT+AGG | 0.333158 | 3_2:-1375418 | Msa0390460:CDS |
| TATTCATGGTCTTTGGTATA+GGG | 0.333206 | 3_2:-1375417 | Msa0390460:CDS |
| ATAATTTGTTTACTGGTTAT+CGG | 0.333503 | 3_2:-1376077 | Msa0390460:CDS |
| AAATGGGTTTCCCTACTCTT+TGG | 0.337536 | 3_2:-1376275 | Msa0390460:CDS |
| GGTGGATGGCTGGCTTGGTG+GGG | 0.339681 | 3_2:-1375237 | Msa0390460:CDS |
| TCTCAGTCTGCTTTCATTAA+GGG | 0.341608 | 3_2:-1376444 | Msa0390460:CDS |
| TGGAAGATATTCATGGTCTT+TGG | 0.343085 | 3_2:-1375424 | Msa0390460:CDS |
| GAACATCTTTATGCCATAAA+GGG | 0.345880 | 3_2:+1374904 | None:intergenic |
| ATATGATTTGTCGTTGGATT+GGG | 0.346404 | 3_2:-1375186 | Msa0390460:CDS |
| GGAGGAGATGTTGGGGTTGG+GGG | 0.349128 | 3_2:-1375078 | Msa0390460:CDS |
| CTTAGTCCGTTTGCCATCTT+GGG | 0.353115 | 3_2:-1374420 | Msa0390460:CDS |
| TGAAACCAAATTGATTAAAA+TGG | 0.356474 | 3_2:+1374649 | None:intergenic |
| TGAAGCTCGAAGGCATAAAA+AGG | 0.358648 | 3_2:-1376376 | Msa0390460:CDS |
| CTTGGCGGTTGTTCCTTGAT+AGG | 0.360099 | 3_2:-1374860 | Msa0390460:CDS |
| GGGTGGATGGCTGGCTTGGT+GGG | 0.360231 | 3_2:-1375238 | Msa0390460:CDS |
| TAAAGTATGCTCGATTATTC+AGG | 0.360683 | 3_2:-1374526 | Msa0390460:CDS |
| TTGTTACGGTGTGGGAAATC+TGG | 0.363864 | 3_2:-1374578 | Msa0390460:CDS |
| GGATGGCTGGCTTGGTGGGG+AGG | 0.367728 | 3_2:-1375234 | Msa0390460:CDS |
| ATGGTAGGAATACCCTGTTT+TGG | 0.370299 | 3_2:-1375259 | Msa0390460:intron |
| TGACAGATGGCTTTGGACTT+TGG | 0.371087 | 3_2:-1375009 | Msa0390460:CDS |
| AAGTTGAAACATTTATCTTT+GGG | 0.371950 | 3_2:-1375721 | Msa0390460:CDS |
| CGACGGGCATTCCCACTAAT+AGG | 0.373144 | 3_2:+1375799 | None:intergenic |
| GCCAGCCATCCACCCAAAAC+AGG | 0.376492 | 3_2:+1375246 | None:intergenic |
| GTGGTAAAGTTTGGAAGAAA+AGG | 0.380913 | 3_2:+1377610 | None:intergenic |
| TCAAAGTATCATCTGCGAAT+TGG | 0.386304 | 3_2:+1376019 | None:intergenic |
| TCAACCTCCGACTGAATTAC+CGG | 0.388094 | 3_2:-1374937 | Msa0390460:CDS |
| CACTTTATTAATAGGTGGAT+TGG | 0.392886 | 3_2:-1374705 | Msa0390460:intron |
| GGTGCGCCGCTCAATTATTC+AGG | 0.393016 | 3_2:-1374610 | Msa0390460:CDS |
| GGAGGAGGAGATGTTGGGGT+TGG | 0.393223 | 3_2:-1375081 | Msa0390460:CDS |
| TTTATCTTTGGGTGGTCGTT+TGG | 0.393571 | 3_2:-1375710 | Msa0390460:CDS |
| AGAAATCTTGGGCTAATATC+CGG | 0.395210 | 3_2:-1375987 | Msa0390460:CDS |
| TAATTTGTTTACTGGTTATC+GGG | 0.400573 | 3_2:-1376076 | Msa0390460:CDS |
| TGATATGTTTCAGGGTGGGT+GGG | 0.401669 | 3_2:-1375150 | Msa0390460:CDS |
| CGTTGTGGACTATCAACCTT+AGG | 0.401724 | 3_2:+1376573 | None:intergenic |
| AAGCTACCCACCAACGAAAT+CGG | 0.402749 | 3_2:+1376534 | None:intergenic |
| CCTTGATAGGTTGCCTACTA+AGG | 0.405192 | 3_2:-1374847 | Msa0390460:CDS |
| ACGATGGTTGTGGTAAAGTT+TGG | 0.406302 | 3_2:+1377601 | None:intergenic |
| GTCTAGATTTGAACTGGTTA+AGG | 0.414178 | 3_2:+1375755 | None:intergenic |
| CATCACTGATCGAAATCTAT+TGG | 0.415261 | 3_2:+1376485 | None:intergenic |
| ACCGCTTCAGTATTGGTTAA+CGG | 0.416172 | 3_2:-1376219 | Msa0390460:CDS |
| CCGCTTCAGTATTGGTTAAC+GGG | 0.419771 | 3_2:-1376218 | Msa0390460:CDS |
| TGGGTGGGGTGTTGATGGTG+AGG | 0.420118 | 3_2:-1375135 | Msa0390460:CDS |
| AATAGGTGGATTGGCACATC+CGG | 0.420305 | 3_2:-1374696 | Msa0390460:intron |
| GATATTCGGTGAGAAATCTT+GGG | 0.422338 | 3_2:-1375998 | Msa0390460:CDS |
| TCCTTCTTCAAGACTCCGTC+AGG | 0.423609 | 3_2:-1375643 | Msa0390460:intron |
| GATATGTTTCAGGGTGGGTG+GGG | 0.431345 | 3_2:-1375149 | Msa0390460:CDS |
| TGCTGAGAAGTGGTGAAGAT+TGG | 0.433124 | 3_2:+1377661 | None:intergenic |
| AAATGGTCTGACACATAAAA+CGG | 0.433312 | 3_2:+1374666 | None:intergenic |
| GGTATAGGGTGTTGTCAGCT+AGG | 0.433670 | 3_2:-1375403 | Msa0390460:CDS |
| CTTCCGTCCGATTTCGTTGG+TGG | 0.435908 | 3_2:-1376541 | Msa0390460:CDS |
| TTGTTTCTCTTAGCGGCAGA+GGG | 0.437274 | 3_2:-1376132 | Msa0390460:CDS |
| TATATGATTTGTCGTTGGAT+TGG | 0.437687 | 3_2:-1375187 | Msa0390460:CDS |
| GCATAAAGATGTTCCTTTGA+AGG | 0.440547 | 3_2:-1374895 | Msa0390460:CDS |
| CTGATATGTTTCAGGGTGGG+TGG | 0.445798 | 3_2:-1375151 | Msa0390460:CDS |
| TCAGGCTATATGGTTTGTTA+CGG | 0.445944 | 3_2:-1374592 | Msa0390460:CDS |
| AATGGTCTGACACATAAAAC+GGG | 0.447031 | 3_2:+1374667 | None:intergenic |
| GCAACCCCAAATACATAAAT+GGG | 0.450120 | 3_2:+1375821 | None:intergenic |
| AAGAAGGAAAGGGCATAAAC+AGG | 0.451279 | 3_2:+1375658 | None:intergenic |
| TGAAGGTTGTGCTCTTTGCT+TGG | 0.452615 | 3_2:-1374878 | Msa0390460:CDS |
| CACATAAAACGGGGCAGCCC+CGG | 0.455450 | 3_2:+1374677 | None:intergenic |
| CTGACAGTCTAGATTTGAAC+TGG | 0.457253 | 3_2:+1375749 | None:intergenic |
| TCTCTTTGGGGAGAGGTTTG+AGG | 0.459356 | 3_2:-1376179 | Msa0390460:CDS |
| TATTTGGGGTTGCCTATTAG+TGG | 0.459869 | 3_2:-1375811 | Msa0390460:CDS |
| CCTTAGTAGGCAACCTATCA+AGG | 0.465188 | 3_2:+1374847 | None:intergenic |
| AACGGCTACCGCTTCAGTAT+TGG | 0.465266 | 3_2:-1376226 | Msa0390460:CDS |
| CAGTTCAAATCTAGACTGTC+AGG | 0.465485 | 3_2:-1375748 | Msa0390460:CDS |
| TCTGGAAGGAAAGAAATAAC+AGG | 0.466198 | 3_2:-1374560 | Msa0390460:CDS |
| ATAAGGATGACAGATGGCTT+TGG | 0.468322 | 3_2:-1375016 | Msa0390460:CDS |
| TTGATGGTGAGGCGTGGAGA+TGG | 0.468950 | 3_2:-1375124 | Msa0390460:CDS |
| CGCTTAGTGTCAGATTTAGC+AGG | 0.470536 | 3_2:-1375211 | Msa0390460:CDS |
| GAGGCTGTTTGTGTGGGAGG+AGG | 0.470647 | 3_2:-1375096 | Msa0390460:CDS |
| ATCTAAGTAACCAAAATCAA+TGG | 0.471810 | 3_2:+1376311 | None:intergenic |
| AGGCGTGGAGATGGAGGCGG+AGG | 0.478191 | 3_2:-1375115 | Msa0390460:CDS |
| TGGTAAAGTTTGGAAGAAAA+GGG | 0.478997 | 3_2:+1377611 | None:intergenic |
| GATGAGTTCTCTTTGGGGAG+AGG | 0.479897 | 3_2:-1376186 | Msa0390460:CDS |
| TTTAATCAATTTGGTTTCAG+TGG | 0.483133 | 3_2:-1374645 | Msa0390460:CDS |
| TTGTTTACTGGTTATCGGGT+TGG | 0.484886 | 3_2:-1376072 | Msa0390460:CDS |
| CCACCAGCCATGGTAGTTGA+AGG | 0.485606 | 3_2:+1374443 | None:intergenic |
| AAGGGTCGTCAAATTCTAGA+TGG | 0.489470 | 3_2:-1376426 | Msa0390460:CDS |
| TCTTGCTTATACGTGGTTGA+AGG | 0.491616 | 3_2:-1374484 | Msa0390460:CDS |
| TTCCCTTCAACTACCATGGC+TGG | 0.491933 | 3_2:-1374446 | Msa0390460:CDS |
| GCGGAGGCTGTTTGTGTGGG+AGG | 0.492756 | 3_2:-1375099 | Msa0390460:CDS |
| GGCTAATATCCGGGCTATGC+GGG | 0.493150 | 3_2:-1375977 | Msa0390460:CDS |
| AGAGGGGTTTCACGTGTTGA+TGG | 0.495490 | 3_2:-1376115 | Msa0390460:CDS |
| GAGGCGGAGGCTGTTTGTGT+GGG | 0.495556 | 3_2:-1375102 | Msa0390460:CDS |
| CTTTGTTAGGAAAATGGTGT+TGG | 0.499857 | 3_2:-1375454 | Msa0390460:intron |
| TTTCATTGCTCTTATCCCTA+AGG | 0.503321 | 3_2:-1376589 | Msa0390460:CDS |
| CGTGTTGATGGAATCTATGT+TGG | 0.503894 | 3_2:-1376103 | Msa0390460:CDS |
| GATGAGGTGATGTTGAAAAT+GGG | 0.503915 | 3_2:-1376291 | Msa0390460:CDS |
| AGGGTGTTGGAAGATATTCA+TGG | 0.504006 | 3_2:-1375431 | Msa0390460:CDS |
| CAGTCGGAGGTTGAGAAGTA+AGG | 0.507830 | 3_2:+1374946 | None:intergenic |
| GAAGCATATGAGATTGATGA+AGG | 0.508183 | 3_2:-1377400 | Msa0390460:CDS |
| CGATGAAGATTGTCCTTAGT+AGG | 0.508494 | 3_2:+1374834 | None:intergenic |
| GAAGAGCAACCCGCATAGCC+CGG | 0.508795 | 3_2:+1375968 | None:intergenic |
| GTCAGCTAGGTATGGAGTAG+AGG | 0.513013 | 3_2:-1375390 | Msa0390460:CDS |
| CCGTTTGCCATCTTGGGCAT+AGG | 0.515883 | 3_2:-1374414 | Msa0390460:CDS |
| GTGAGGCGTGGAGATGGAGG+CGG | 0.516719 | 3_2:-1375118 | Msa0390460:CDS |
| TGTAGCTGAATAACTCAAGT+GGG | 0.520654 | 3_2:-1377426 | Msa0390460:intron |
| GCAAAGAGCACAACCTTCAA+AGG | 0.521476 | 3_2:+1374882 | None:intergenic |
| TTTGTTTCTCTTAGCGGCAG+AGG | 0.523652 | 3_2:-1376133 | Msa0390460:CDS |
| AAATGGATAAAAGAATATAC+AGG | 0.523977 | 3_2:-1376249 | Msa0390460:CDS |
| TCACTTCCCTTCAACTACCA+TGG | 0.525615 | 3_2:-1374450 | Msa0390460:CDS |
| TTGGTTAAATGAGGCAGCTA+TGG | 0.526122 | 3_2:-1375869 | Msa0390460:CDS |
| TTCCGTCCGATTTCGTTGGT+GGG | 0.526794 | 3_2:-1376540 | Msa0390460:CDS |
| CAATAGATTTCGATCAGTGA+TGG | 0.527955 | 3_2:-1376484 | Msa0390460:CDS |
| GTTCGAATGTCACAACGTCT+TGG | 0.528573 | 3_2:-1375888 | Msa0390460:CDS |
| AATCAATTTGGTTTCAGTGG+TGG | 0.530164 | 3_2:-1374642 | Msa0390460:CDS |
| CCCAAAGAGAACTCATCAGT+TGG | 0.530696 | 3_2:+1376192 | None:intergenic |
| AATAGATTTCGATCAGTGAT+GGG | 0.531221 | 3_2:-1376483 | Msa0390460:CDS |
| ATAGGTGGATTGGCACATCC+GGG | 0.532673 | 3_2:-1374695 | Msa0390460:intron |
| CAGGTTATATGATTTGTCGT+TGG | 0.535759 | 3_2:-1375192 | Msa0390460:CDS |
| GGGGTGTTGATGGTGAGGCG+TGG | 0.535965 | 3_2:-1375130 | Msa0390460:CDS |
| TGTTAGGAAAATGGTGTTGG+AGG | 0.537930 | 3_2:-1375451 | Msa0390460:intron |
| TCAGTGTCTGATATGTTTCA+GGG | 0.540227 | 3_2:-1375158 | Msa0390460:CDS |
| TTGGGGAGAGGTTTGAGGCA+AGG | 0.541205 | 3_2:-1376174 | Msa0390460:CDS |
| TGTGGGAGGAGGAGATGTTG+GGG | 0.542610 | 3_2:-1375085 | Msa0390460:CDS |
| GGAGGCGGAGGCTGTTTGTG+TGG | 0.543084 | 3_2:-1375103 | Msa0390460:CDS |
| CACTTCTAACAGAGAAAACA+CGG | 0.544882 | 3_2:+1374979 | None:intergenic |
| TATATGGTTTGTTACGGTGT+GGG | 0.546176 | 3_2:-1374586 | Msa0390460:CDS |
| CTATCCCATTTATGTATTTG+GGG | 0.546772 | 3_2:-1375825 | Msa0390460:CDS |
| TGACTTCCGTCCGATTTCGT+TGG | 0.546860 | 3_2:-1376544 | Msa0390460:CDS |
| AGGTTGTGCTCTTTGCTTGG+CGG | 0.547626 | 3_2:-1374875 | Msa0390460:CDS |
| ATTTGGGGTTGCCTATTAGT+GGG | 0.549067 | 3_2:-1375810 | Msa0390460:CDS |
| AAAATGGTGTTGGAGGGTGT+TGG | 0.549378 | 3_2:-1375444 | Msa0390460:CDS |
| CATAAACAGGCAATGACGAC+AGG | 0.550073 | 3_2:+1375671 | None:intergenic |
| AGGGTGTTGTCAGCTAGGTA+TGG | 0.552198 | 3_2:-1375398 | Msa0390460:CDS |
| TGAGATTTGAACGATGGTTG+TGG | 0.556663 | 3_2:+1377591 | None:intergenic |
| CGGAGTCTTGAAGAAGGAAA+GGG | 0.558436 | 3_2:+1375648 | None:intergenic |
| ACGGAGTCTTGAAGAAGGAA+AGG | 0.561688 | 3_2:+1375647 | None:intergenic |
| ACGGACTAAGCCACCAGCCA+TGG | 0.566699 | 3_2:+1374433 | None:intergenic |
| AACCATCAATTGCAATAGCA+AGG | 0.567244 | 3_2:-1377567 | Msa0390460:intron |
| ACTCTAGCCTATGCCCAAGA+TGG | 0.567416 | 3_2:+1374407 | None:intergenic |
| TGATTTGTCGTTGGATTGGG+AGG | 0.567711 | 3_2:-1375183 | Msa0390460:CDS |
| TTGAAACATTTATCTTTGGG+TGG | 0.568228 | 3_2:-1375718 | Msa0390460:CDS |
| TCAGCTAGGTATGGAGTAGA+GGG | 0.568644 | 3_2:-1375389 | Msa0390460:CDS |
| CCTATGCCCAAGATGGCAAA+CGG | 0.570182 | 3_2:+1374414 | None:intergenic |
| TTTCAGTGGTGGTATCTCAA+AGG | 0.570778 | 3_2:-1374631 | Msa0390460:CDS |
| TCAAATCTAGACTGTCAGGT+TGG | 0.573586 | 3_2:-1375744 | Msa0390460:CDS |
| TTCCCAAAACGACAATCGAC+GGG | 0.573811 | 3_2:+1375783 | None:intergenic |
| ATGGTGAGGCGTGGAGATGG+AGG | 0.575113 | 3_2:-1375121 | Msa0390460:CDS |
| GAAATCTTGGGCTAATATCC+GGG | 0.579425 | 3_2:-1375986 | Msa0390460:CDS |
| GGTTGGAAACAGTGGTACTA+CGG | 0.587005 | 3_2:-1376055 | Msa0390460:CDS |
| AGGATATGATGGGATTGAAG+AGG | 0.588220 | 3_2:-1377368 | Msa0390460:CDS |
| ACCTGACGGAGTCTTGAAGA+AGG | 0.589330 | 3_2:+1375642 | None:intergenic |
| GGGCTAATATCCGGGCTATG+CGG | 0.590074 | 3_2:-1375978 | Msa0390460:CDS |
| GTTGTGGACTATCAACCTTA+GGG | 0.596286 | 3_2:+1376574 | None:intergenic |
| TTGTAGCTGAATAACTCAAG+TGG | 0.597221 | 3_2:-1377427 | Msa0390460:intron |
| GTGAAGATTGGAGCGTGGAG+AGG | 0.597317 | 3_2:+1377673 | None:intergenic |
| GTTCCCAAAACGACAATCGA+CGG | 0.598477 | 3_2:+1375782 | None:intergenic |
| AAGTGGTGAAGATTGGAGCG+TGG | 0.599408 | 3_2:+1377668 | None:intergenic |
| CCTTCAACTACCATGGCTGG+TGG | 0.599469 | 3_2:-1374443 | Msa0390460:CDS |
| CACAACGTCTTGGTTAAATG+AGG | 0.600995 | 3_2:-1375878 | Msa0390460:CDS |
| CTATATGGTTTGTTACGGTG+TGG | 0.601652 | 3_2:-1374587 | Msa0390460:CDS |
| AAAGTTTGGAAGAAAAGGGT+TGG | 0.602762 | 3_2:+1377615 | None:intergenic |
| CACCAGCCATGGTAGTTGAA+GGG | 0.605348 | 3_2:+1374444 | None:intergenic |
| GTTAGGAAAATGGTGTTGGA+GGG | 0.605960 | 3_2:-1375450 | Msa0390460:intron |
| AACATCTTTATGCCATAAAG+GGG | 0.613357 | 3_2:+1374905 | None:intergenic |
| CCCGTTAACCAATACTGAAG+CGG | 0.613446 | 3_2:+1376218 | None:intergenic |
| GATAAAAGAATATACAGGAA+CGG | 0.615785 | 3_2:-1376244 | Msa0390460:CDS |
| GAACATTGTTTGCTGAGAAG+TGG | 0.616992 | 3_2:+1377651 | None:intergenic |
| CATAAAGGGGAAATAGCCAC+CGG | 0.623747 | 3_2:+1374918 | None:intergenic |
| CGTAATGGAAGATTGGTCAA+AGG | 0.626969 | 3_2:-1376624 | Msa0390460:intron |
| TGTCTGATATGTTTCAGGGT+GGG | 0.627717 | 3_2:-1375154 | Msa0390460:CDS |
| TTAAGTCTCTTGCTTATACG+TGG | 0.630083 | 3_2:-1374491 | Msa0390460:CDS |
| CGGAAGTCATTCAGACGTTG+TGG | 0.632534 | 3_2:+1376558 | None:intergenic |
| TACCCACCAACGAAATCGGA+CGG | 0.634968 | 3_2:+1376538 | None:intergenic |
| GGTATGGAGTAGAGGGAGGT+CGG | 0.638979 | 3_2:-1375382 | Msa0390460:intron |
| CCAGCCATCCACCCAAAACA+GGG | 0.639033 | 3_2:+1375247 | None:intergenic |
| GTAGCTGAATAACTCAAGTG+GGG | 0.645846 | 3_2:-1377425 | Msa0390460:intron |
| TACGGTGTGGGAAATCTGGA+AGG | 0.646621 | 3_2:-1374574 | Msa0390460:CDS |
| ATAGCCACCGGTAATTCAGT+CGG | 0.646686 | 3_2:+1374930 | None:intergenic |
| AGGTTGTTGATGAAGCTCGA+AGG | 0.649394 | 3_2:-1376386 | Msa0390460:CDS |
| CAACTGATGAGTTCTCTTTG+GGG | 0.660475 | 3_2:-1376191 | Msa0390460:CDS |
| AGTATGCTCGATTATTCAGG+TGG | 0.661875 | 3_2:-1374523 | Msa0390460:CDS |
| GATTTGAACTGGTTAAGGAG+CGG | 0.661881 | 3_2:+1375760 | None:intergenic |
| GGTTATCGGGTTGGAAACAG+TGG | 0.663028 | 3_2:-1376063 | Msa0390460:CDS |
| GCCACCGGTAATTCAGTCGG+AGG | 0.663230 | 3_2:+1374933 | None:intergenic |
| AGGTAGATAAGGATGACAGA+TGG | 0.665850 | 3_2:-1375022 | Msa0390460:CDS |
| GTGTCTGATATGTTTCAGGG+TGG | 0.667939 | 3_2:-1375155 | Msa0390460:CDS |
| TAGCTGAATAACTCAAGTGG+GGG | 0.668766 | 3_2:-1377424 | Msa0390460:CDS |
| GCTAGGTATGGAGTAGAGGG+AGG | 0.674152 | 3_2:-1375386 | Msa0390460:CDS |
| TAGGTGGATTGGCACATCCG+GGG | 0.674520 | 3_2:-1374694 | Msa0390460:CDS |
| ATAGATTTCGATCAGTGATG+GGG | 0.686350 | 3_2:-1376482 | Msa0390460:CDS |
| AAGGACAATCTTCATCGTCG+TGG | 0.690564 | 3_2:-1374828 | Msa0390460:CDS |
| ACCTCCGACTGAATTACCGG+TGG | 0.692956 | 3_2:-1374934 | Msa0390460:CDS |
| GATTGAAGAGGAGAGTGATG+AGG | 0.696250 | 3_2:-1377356 | Msa0390460:CDS |
| ATATAGCCTGAATAATTGAG+CGG | 0.700944 | 3_2:+1374604 | None:intergenic |
| TGTTTCTCTTAGCGGCAGAG+GGG | 0.702769 | 3_2:-1376131 | Msa0390460:CDS |
| ACTTCTAACAGAGAAAACAC+GGG | 0.722785 | 3_2:+1374980 | None:intergenic |
| ATGGTCTGACACATAAAACG+GGG | 0.767718 | 3_2:+1374668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATGATTTTATTAATG+AGG | + | chr3_2:1374969-1374988 | None:intergenic | 10.0% |
| !! | CATTAATAAAATCATTAAAA+TGG | - | chr3_2:1374969-1374988 | Msa0390460:CDS | 10.0% |
| !!! | TATTTTAAACTGTTTTTTTT+TGG | - | chr3_2:1376524-1376543 | Msa0390460:CDS | 10.0% |
| !!! | ATTTTAAACTGTTTTTTTTT+GGG | - | chr3_2:1376525-1376544 | Msa0390460:CDS | 10.0% |
| !!! | ATTTTCTAAAAGCAAAATTT+TGG | + | chr3_2:1374627-1374646 | None:intergenic | 15.0% |
| !!! | AAAATTTTGCTTTTAGAAAA+TGG | - | chr3_2:1374626-1374645 | Msa0390460:CDS | 15.0% |
| !!! | AAATTTTGCTTTTAGAAAAT+GGG | - | chr3_2:1374627-1374646 | Msa0390460:CDS | 15.0% |
| !! | ATTCTCAAAATAATAAGTAT+TGG | - | chr3_2:1375002-1375021 | Msa0390460:CDS | 15.0% |
| !!! | TTTTTTCTTATAAATATGAC+CGG | - | chr3_2:1375198-1375217 | Msa0390460:CDS | 15.0% |
| !!! | AAAAAAGTATTTTAGTATTC+TGG | - | chr3_2:1375249-1375268 | Msa0390460:CDS | 15.0% |
| !!! | TTTTAAACTGTTTTTTTTTG+GGG | - | chr3_2:1376526-1376545 | Msa0390460:CDS | 15.0% |
| !!! | TTTTACATTGCAATATTTTT+TGG | - | chr3_2:1377386-1377405 | Msa0390460:CDS | 15.0% |
| !!! | TTTTTGCATATAAATGTAAC+CGG | + | chr3_2:1375045-1375064 | None:intergenic | 20.0% |
| !! | TTAACATAAAAAATTCCATC+CGG | + | chr3_2:1375220-1375239 | None:intergenic | 20.0% |
| !! | TATGATTTAAAAACTTGTCA+TGG | + | chr3_2:1375370-1375389 | None:intergenic | 20.0% |
| !!! | TACGATGAAACTTTTTTTTA+GGG | + | chr3_2:1375483-1375502 | None:intergenic | 20.0% |
| !!! | TTACGATGAAACTTTTTTTT+AGG | + | chr3_2:1375484-1375503 | None:intergenic | 20.0% |
| !! | AAAAAAAAGTTTCATCGTAA+TGG | - | chr3_2:1375484-1375503 | Msa0390460:intron | 20.0% |
| !! | AAATGGATAAAAGAATATAC+AGG | - | chr3_2:1375874-1375893 | Msa0390460:CDS | 20.0% |
| !!! | TTGGTTAATAATTTGTTTAC+TGG | - | chr3_2:1376039-1376058 | Msa0390460:CDS | 20.0% |
| !!! | ATAATTTGTTTACTGGTTAT+CGG | - | chr3_2:1376046-1376065 | Msa0390460:CDS | 20.0% |
| !! | AAGTTGAAACATTTATCTTT+GGG | - | chr3_2:1376402-1376421 | Msa0390460:CDS | 20.0% |
| !!! | GTTTAAAATAGATTCAATAG+AGG | + | chr3_2:1376514-1376533 | None:intergenic | 20.0% |
| !!! | TTTAAACTGTTTTTTTTTGG+GGG | - | chr3_2:1376527-1376546 | Msa0390460:CDS | 20.0% |
| !!! | GCAATATTTTTTGGTTAATT+TGG | - | chr3_2:1377395-1377414 | Msa0390460:CDS | 20.0% |
| !! | TAATTTGGCACTTTATTAAT+AGG | - | chr3_2:1377410-1377429 | Msa0390460:CDS | 20.0% |
| !! | TGAAACCAAATTGATTAAAA+TGG | + | chr3_2:1377477-1377496 | None:intergenic | 20.0% |
| ! | CATTCAATACCTAATATATG+TGG | - | chr3_2:1375084-1375103 | Msa0390460:CDS | 25.0% |
| ! | TTTACAAAAAAGTTACGACA+TGG | - | chr3_2:1375285-1375304 | Msa0390460:intron | 25.0% |
| ! | TGTGTTAAAAAACATGAGTT+TGG | + | chr3_2:1375416-1375435 | None:intergenic | 25.0% |
| !! | TCAAATTCTAGATGGTATTT+TGG | - | chr3_2:1375705-1375724 | Msa0390460:CDS | 25.0% |
| ! | ATCTAAGTAACCAAAATCAA+TGG | + | chr3_2:1375815-1375834 | None:intergenic | 25.0% |
| ! | GATAAAAGAATATACAGGAA+CGG | - | chr3_2:1375879-1375898 | Msa0390460:CDS | 25.0% |
| !!! | TAATTTGTTTACTGGTTATC+GGG | - | chr3_2:1376047-1376066 | Msa0390460:CDS | 25.0% |
| ! | TTCTATCCCATTTATGTATT+TGG | - | chr3_2:1376296-1376315 | Msa0390460:CDS | 25.0% |
| ! | TCTATCCCATTTATGTATTT+GGG | - | chr3_2:1376297-1376316 | Msa0390460:CDS | 25.0% |
| ! | GAAGTTGAAACATTTATCTT+TGG | - | chr3_2:1376401-1376420 | Msa0390460:CDS | 25.0% |
| !!! | TTAAACTGTTTTTTTTTGGG+GGG | - | chr3_2:1376528-1376547 | Msa0390460:CDS | 25.0% |
| !! | GAGTTTAATAATGCTTTGTT+AGG | - | chr3_2:1376656-1376675 | Msa0390460:intron | 25.0% |
| !! | ATAATGCTTTGTTAGGAAAA+TGG | - | chr3_2:1376663-1376682 | Msa0390460:intron | 25.0% |
| !!! | TCAGACCATTTTAATCAATT+TGG | - | chr3_2:1377469-1377488 | Msa0390460:intron | 25.0% |
| !! | TTTAATCAATTTGGTTTCAG+TGG | - | chr3_2:1377478-1377497 | Msa0390460:intron | 25.0% |
| TGGTAAAGTTTGGAAGAAAA+GGG | + | chr3_2:1374515-1374534 | None:intergenic | 30.0% | |
| !! | ATCTTGTTGTTTCAGCAAAA+GGG | - | chr3_2:1374597-1374616 | Msa0390460:CDS | 30.0% |
| GGATAAAATAGTACTATCTC+CGG | - | chr3_2:1375023-1375042 | Msa0390460:CDS | 30.0% | |
| TTCTTATAAATATGACCGGA+TGG | - | chr3_2:1375202-1375221 | Msa0390460:CDS | 30.0% | |
| TTTAAAAACTTGTCATGGAC+TGG | + | chr3_2:1375365-1375384 | None:intergenic | 30.0% | |
| AAACGCACACTTCAAATTAA+AGG | - | chr3_2:1375438-1375457 | Msa0390460:CDS | 30.0% | |
| AATAGATTTCGATCAGTGAT+GGG | - | chr3_2:1375640-1375659 | Msa0390460:intron | 30.0% | |
| !! | AATTCTAGATGGTATTTTGG+TGG | - | chr3_2:1375708-1375727 | Msa0390460:CDS | 30.0% |
| !!! | TGATTTTGGTTACTTAGATG+AGG | - | chr3_2:1375816-1375835 | Msa0390460:CDS | 30.0% |
| GCAGATGATACTTTGATATT+CGG | - | chr3_2:1376111-1376130 | Msa0390460:CDS | 30.0% | |
| !!! | TCTTCTTTTTCAAGCTATGT+CGG | - | chr3_2:1376176-1376195 | Msa0390460:CDS | 30.0% |
| ! | TAACTTCTCAAAGAGTCTTT+TGG | - | chr3_2:1376209-1376228 | Msa0390460:CDS | 30.0% |
| CTATCCCATTTATGTATTTG+GGG | - | chr3_2:1376298-1376317 | Msa0390460:CDS | 30.0% | |
| TTGAAACATTTATCTTTGGG+TGG | - | chr3_2:1376405-1376424 | Msa0390460:CDS | 30.0% | |
| !!! | TAAACTGTTTTTTTTTGGGG+GGG | - | chr3_2:1376529-1376548 | Msa0390460:CDS | 30.0% |
| ATGACCACAGAAAAATAAGT+TGG | - | chr3_2:1376570-1376589 | Msa0390460:CDS | 30.0% | |
| TGACCACAGAAAAATAAGTT+GGG | - | chr3_2:1376571-1376590 | Msa0390460:CDS | 30.0% | |
| GAACACTATTTGTAGTAGTA+AGG | - | chr3_2:1376601-1376620 | Msa0390460:CDS | 30.0% | |
| ATATTCATGGTCTTTGGTAT+AGG | - | chr3_2:1376705-1376724 | Msa0390460:intron | 30.0% | |
| TATTCATGGTCTTTGGTATA+GGG | - | chr3_2:1376706-1376725 | Msa0390460:intron | 30.0% | |
| TGATATTTATGCGTTGTGTA+AGG | - | chr3_2:1376802-1376821 | Msa0390460:intron | 30.0% | |
| ! | TATATGATTTGTCGTTGGAT+TGG | - | chr3_2:1376936-1376955 | Msa0390460:intron | 30.0% |
| ! | ATATGATTTGTCGTTGGATT+GGG | - | chr3_2:1376937-1376956 | Msa0390460:intron | 30.0% |
| AACATCTTTATGCCATAAAG+GGG | + | chr3_2:1377221-1377240 | None:intergenic | 30.0% | |
| GAACATCTTTATGCCATAAA+GGG | + | chr3_2:1377222-1377241 | None:intergenic | 30.0% | |
| TTTGGCACTTTATTAATAGG+TGG | - | chr3_2:1377413-1377432 | Msa0390460:CDS | 30.0% | |
| CACTTTATTAATAGGTGGAT+TGG | - | chr3_2:1377418-1377437 | Msa0390460:CDS | 30.0% | |
| AAATGGTCTGACACATAAAA+CGG | + | chr3_2:1377460-1377479 | None:intergenic | 30.0% | |
| ATATAGCCTGAATAATTGAG+CGG | + | chr3_2:1377522-1377541 | None:intergenic | 30.0% | |
| TAAAGTATGCTCGATTATTC+AGG | - | chr3_2:1377597-1377616 | Msa0390460:CDS | 30.0% | |
| AAAGTTTGGAAGAAAAGGGT+TGG | + | chr3_2:1374511-1374530 | None:intergenic | 35.0% | |
| GTGGTAAAGTTTGGAAGAAA+AGG | + | chr3_2:1374516-1374535 | None:intergenic | 35.0% | |
| !!! | TGGTTTTGAGATTTGAACGA+TGG | + | chr3_2:1374541-1374560 | None:intergenic | 35.0% |
| AACCATCAATTGCAATAGCA+AGG | - | chr3_2:1374556-1374575 | Msa0390460:CDS | 35.0% | |
| !! | TACCTTGCTATTGCAATTGA+TGG | + | chr3_2:1374561-1374580 | None:intergenic | 35.0% |
| TTGCTGAAACAACAAGATGA+AGG | + | chr3_2:1374595-1374614 | None:intergenic | 35.0% | |
| !! | CATCTTGTTGTTTCAGCAAA+AGG | - | chr3_2:1374596-1374615 | Msa0390460:CDS | 35.0% |
| TTGTAGCTGAATAACTCAAG+TGG | - | chr3_2:1374696-1374715 | Msa0390460:intron | 35.0% | |
| TGTAGCTGAATAACTCAAGT+GGG | - | chr3_2:1374697-1374716 | Msa0390460:intron | 35.0% | |
| GAAGCATATGAGATTGATGA+AGG | - | chr3_2:1374723-1374742 | Msa0390460:intron | 35.0% | |
| !!! | GAGATTGATGAAGGTGTTTT+TGG | - | chr3_2:1374732-1374751 | Msa0390460:intron | 35.0% |
| !!! | ATTGATGAAGGTGTTTTTGG+AGG | - | chr3_2:1374735-1374754 | Msa0390460:intron | 35.0% |
| !!! | GTGTTTTTGGAGGATATGAT+GGG | - | chr3_2:1374745-1374764 | Msa0390460:intron | 35.0% |
| ACCTAATATATGTGGAGAAG+TGG | - | chr3_2:1375092-1375111 | Msa0390460:CDS | 35.0% | |
| CCTAATATATGTGGAGAAGT+GGG | - | chr3_2:1375093-1375112 | Msa0390460:CDS | 35.0% | |
| CTAATATATGTGGAGAAGTG+GGG | - | chr3_2:1375094-1375113 | Msa0390460:CDS | 35.0% | |
| ACAATGCATTATACATGCAG+AGG | + | chr3_2:1375141-1375160 | None:intergenic | 35.0% | |
| ! | TGAGCTTAACTTAGTTGGTA+GGG | + | chr3_2:1375164-1375183 | None:intergenic | 35.0% |
| CAAAACAATCAGCAAGTGAT+TGG | + | chr3_2:1375341-1375360 | None:intergenic | 35.0% | |
| ! | GTTTCATCGTAATGGAAGAT+TGG | - | chr3_2:1375492-1375511 | Msa0390460:intron | 35.0% |
| TTTCATTGCTCTTATCCCTA+AGG | - | chr3_2:1375534-1375553 | Msa0390460:intron | 35.0% | |
| CATCACTGATCGAAATCTAT+TGG | + | chr3_2:1375641-1375660 | None:intergenic | 35.0% | |
| CAATAGATTTCGATCAGTGA+TGG | - | chr3_2:1375639-1375658 | Msa0390460:intron | 35.0% | |
| ATAGATTTCGATCAGTGATG+GGG | - | chr3_2:1375641-1375660 | Msa0390460:intron | 35.0% | |
| TTCTCAGTCTGCTTTCATTA+AGG | - | chr3_2:1375678-1375697 | Msa0390460:CDS | 35.0% | |
| TCTCAGTCTGCTTTCATTAA+GGG | - | chr3_2:1375679-1375698 | Msa0390460:CDS | 35.0% | |
| AGATGAGGTGATGTTGAAAA+TGG | - | chr3_2:1375831-1375850 | Msa0390460:CDS | 35.0% | |
| GATGAGGTGATGTTGAAAAT+GGG | - | chr3_2:1375832-1375851 | Msa0390460:CDS | 35.0% | |
| ! | TCAAAGTATCATCTGCGAAT+TGG | + | chr3_2:1376107-1376126 | None:intergenic | 35.0% |
| ! | TGATATTCGGTGAGAAATCT+TGG | - | chr3_2:1376124-1376143 | Msa0390460:CDS | 35.0% |
| ! | GATATTCGGTGAGAAATCTT+GGG | - | chr3_2:1376125-1376144 | Msa0390460:CDS | 35.0% |
| AGAAATCTTGGGCTAATATC+CGG | - | chr3_2:1376136-1376155 | Msa0390460:CDS | 35.0% | |
| !!! | CTTCTTTTTCAAGCTATGTC+GGG | - | chr3_2:1376177-1376196 | Msa0390460:CDS | 35.0% |
| ! | TTCTCAAAGAGTCTTTTGGT+TGG | - | chr3_2:1376213-1376232 | Msa0390460:CDS | 35.0% |
| GCAACCCCAAATACATAAAT+GGG | + | chr3_2:1376305-1376324 | None:intergenic | 35.0% | |
| GTCTAGATTTGAACTGGTTA+AGG | + | chr3_2:1376371-1376390 | None:intergenic | 35.0% | |
| !!! | AAACTGTTTTTTTTTGGGGG+GGG | - | chr3_2:1376530-1376549 | Msa0390460:CDS | 35.0% |
| ! | GAAAAATAAGTTGGGTGGAT+TGG | - | chr3_2:1376579-1376598 | Msa0390460:CDS | 35.0% |
| CACTATTTGTAGTAGTAAGG+AGG | - | chr3_2:1376604-1376623 | Msa0390460:CDS | 35.0% | |
| ATTTGTAGTAGTAAGGAGGT+TGG | - | chr3_2:1376608-1376627 | Msa0390460:CDS | 35.0% | |
| CTTTGTTAGGAAAATGGTGT+TGG | - | chr3_2:1376669-1376688 | Msa0390460:intron | 35.0% | |
| TGGAAGATATTCATGGTCTT+TGG | - | chr3_2:1376699-1376718 | Msa0390460:intron | 35.0% | |
| ATAAATATCACGCCACCATA+GGG | + | chr3_2:1376792-1376811 | None:intergenic | 35.0% | |
| TATTTATGCGTTGTGTAAGG+AGG | - | chr3_2:1376805-1376824 | Msa0390460:intron | 35.0% | |
| ! | CAGGTTATATGATTTGTCGT+TGG | - | chr3_2:1376931-1376950 | Msa0390460:intron | 35.0% |
| ATCAGTGTCTGATATGTTTC+AGG | - | chr3_2:1376964-1376983 | Msa0390460:intron | 35.0% | |
| TCAGTGTCTGATATGTTTCA+GGG | - | chr3_2:1376965-1376984 | Msa0390460:intron | 35.0% | |
| ! | TCTTCAGAATGTGATTTTGC+AGG | - | chr3_2:1377081-1377100 | Msa0390460:intron | 35.0% |
| ! | TGTGATTTTGCAGGTAGATA+AGG | - | chr3_2:1377090-1377109 | Msa0390460:intron | 35.0% |
| ACTTCTAACAGAGAAAACAC+GGG | + | chr3_2:1377146-1377165 | None:intergenic | 35.0% | |
| CACTTCTAACAGAGAAAACA+CGG | + | chr3_2:1377147-1377166 | None:intergenic | 35.0% | |
| GGAACATCTTTATGCCATAA+AGG | + | chr3_2:1377223-1377242 | None:intergenic | 35.0% | |
| GCATAAAGATGTTCCTTTGA+AGG | - | chr3_2:1377228-1377247 | Msa0390460:intron | 35.0% | |
| AATGGTCTGACACATAAAAC+GGG | + | chr3_2:1377459-1377478 | None:intergenic | 35.0% | |
| ! | AATCAATTTGGTTTCAGTGG+TGG | - | chr3_2:1377481-1377500 | Msa0390460:intron | 35.0% |
| GCTCAATTATTCAGGCTATA+TGG | - | chr3_2:1377521-1377540 | Msa0390460:intron | 35.0% | |
| !! | TCAGGCTATATGGTTTGTTA+CGG | - | chr3_2:1377531-1377550 | Msa0390460:intron | 35.0% |
| !! | TATATGGTTTGTTACGGTGT+GGG | - | chr3_2:1377537-1377556 | Msa0390460:intron | 35.0% |
| TCTGGAAGGAAAGAAATAAC+AGG | - | chr3_2:1377563-1377582 | Msa0390460:intron | 35.0% | |
| TTAAGTCTCTTGCTTATACG+TGG | - | chr3_2:1377632-1377651 | Msa0390460:CDS | 35.0% | |
| ! | GAACATTGTTTGCTGAGAAG+TGG | + | chr3_2:1374475-1374494 | None:intergenic | 40.0% |
| ACGATGGTTGTGGTAAAGTT+TGG | + | chr3_2:1374525-1374544 | None:intergenic | 40.0% | |
| TGAGATTTGAACGATGGTTG+TGG | + | chr3_2:1374535-1374554 | None:intergenic | 40.0% | |
| GTAGCTGAATAACTCAAGTG+GGG | - | chr3_2:1374698-1374717 | Msa0390460:intron | 40.0% | |
| TAGCTGAATAACTCAAGTGG+GGG | - | chr3_2:1374699-1374718 | Msa0390460:intron | 40.0% | |
| !!! | GGTGTTTTTGGAGGATATGA+TGG | - | chr3_2:1374744-1374763 | Msa0390460:intron | 40.0% |
| ! | AGGATATGATGGGATTGAAG+AGG | - | chr3_2:1374755-1374774 | Msa0390460:intron | 40.0% |
| CCCACTTCTCCACATATATT+AGG | + | chr3_2:1375096-1375115 | None:intergenic | 40.0% | |
| GTGAGCTTAACTTAGTTGGT+AGG | + | chr3_2:1375165-1375184 | None:intergenic | 40.0% | |
| ACCAACTAAGTTAAGCTCAC+TGG | - | chr3_2:1375165-1375184 | Msa0390460:CDS | 40.0% | |
| CCAACTAAGTTAAGCTCACT+GGG | - | chr3_2:1375166-1375185 | Msa0390460:CDS | 40.0% | |
| ! | CGTAATGGAAGATTGGTCAA+AGG | - | chr3_2:1375499-1375518 | Msa0390460:intron | 40.0% |
| ! | GTTGTGGACTATCAACCTTA+GGG | + | chr3_2:1375552-1375571 | None:intergenic | 40.0% |
| AAGGGTCGTCAAATTCTAGA+TGG | - | chr3_2:1375697-1375716 | Msa0390460:CDS | 40.0% | |
| !!! | TGGTATTTTGGTGGCTAATG+AGG | - | chr3_2:1375717-1375736 | Msa0390460:CDS | 40.0% |
| ! | TGAAGCTCGAAGGCATAAAA+AGG | - | chr3_2:1375747-1375766 | Msa0390460:CDS | 40.0% |
| !!! | GCGTACGATTCCATTGATTT+TGG | - | chr3_2:1375802-1375821 | Msa0390460:CDS | 40.0% |
| ! | AAATGGGTTTCCCTACTCTT+TGG | - | chr3_2:1375848-1375867 | Msa0390460:CDS | 40.0% |
| ! | TCCATTTTCGCCAAAGAGTA+GGG | + | chr3_2:1375861-1375880 | None:intergenic | 40.0% |
| ! | ATCCATTTTCGCCAAAGAGT+AGG | + | chr3_2:1375862-1375881 | None:intergenic | 40.0% |
| !! | ACCGCTTCAGTATTGGTTAA+CGG | - | chr3_2:1375904-1375923 | Msa0390460:CDS | 40.0% |
| TCCAACTGATGAGTTCTCTT+TGG | - | chr3_2:1375930-1375949 | Msa0390460:CDS | 40.0% | |
| CCAACTGATGAGTTCTCTTT+GGG | - | chr3_2:1375931-1375950 | Msa0390460:CDS | 40.0% | |
| CAACTGATGAGTTCTCTTTG+GGG | - | chr3_2:1375932-1375951 | Msa0390460:CDS | 40.0% | |
| GAAACAAAAAGGGCGACAAA+GGG | + | chr3_2:1375978-1375997 | None:intergenic | 40.0% | |
| AGAAACAAAAAGGGCGACAA+AGG | + | chr3_2:1375979-1375998 | None:intergenic | 40.0% | |
| !! | GCCCTTTTTGTTTCTCTTAG+CGG | - | chr3_2:1375984-1376003 | Msa0390460:CDS | 40.0% |
| GCCGCTAAGAGAAACAAAAA+GGG | + | chr3_2:1375988-1376007 | None:intergenic | 40.0% | |
| TGCCGCTAAGAGAAACAAAA+AGG | + | chr3_2:1375989-1376008 | None:intergenic | 40.0% | |
| ! | CGTGTTGATGGAATCTATGT+TGG | - | chr3_2:1376020-1376039 | Msa0390460:CDS | 40.0% |
| ! | TTGTTTACTGGTTATCGGGT+TGG | - | chr3_2:1376051-1376070 | Msa0390460:CDS | 40.0% |
| GAAATCTTGGGCTAATATCC+GGG | - | chr3_2:1376137-1376156 | Msa0390460:CDS | 40.0% | |
| CACAACGTCTTGGTTAAATG+AGG | - | chr3_2:1376245-1376264 | Msa0390460:CDS | 40.0% | |
| TTGGTTAAATGAGGCAGCTA+TGG | - | chr3_2:1376254-1376273 | Msa0390460:CDS | 40.0% | |
| GGCAACCCCAAATACATAAA+TGG | + | chr3_2:1376306-1376325 | None:intergenic | 40.0% | |
| ! | TATTTGGGGTTGCCTATTAG+TGG | - | chr3_2:1376312-1376331 | Msa0390460:CDS | 40.0% |
| ! | ATTTGGGGTTGCCTATTAGT+GGG | - | chr3_2:1376313-1376332 | Msa0390460:CDS | 40.0% |
| GATTTGAACTGGTTAAGGAG+CGG | + | chr3_2:1376366-1376385 | None:intergenic | 40.0% | |
| CTGACAGTCTAGATTTGAAC+TGG | + | chr3_2:1376377-1376396 | None:intergenic | 40.0% | |
| CAGTTCAAATCTAGACTGTC+AGG | - | chr3_2:1376375-1376394 | Msa0390460:CDS | 40.0% | |
| TCAAATCTAGACTGTCAGGT+TGG | - | chr3_2:1376379-1376398 | Msa0390460:CDS | 40.0% | |
| TTTATCTTTGGGTGGTCGTT+TGG | - | chr3_2:1376413-1376432 | Msa0390460:CDS | 40.0% | |
| ! | AAGAAGGAAAGGGCATAAAC+AGG | + | chr3_2:1376468-1376487 | None:intergenic | 40.0% |
| ATAGAGGAGACAATACCTGA+CGG | + | chr3_2:1376498-1376517 | None:intergenic | 40.0% | |
| !!! | AACTGTTTTTTTTTGGGGGG+GGG | - | chr3_2:1376531-1376550 | Msa0390460:CDS | 40.0% |
| !! | CCACCCAACTTATTTTTCTG+TGG | + | chr3_2:1376577-1376596 | None:intergenic | 40.0% |
| ! | CCACAGAAAAATAAGTTGGG+TGG | - | chr3_2:1376574-1376593 | Msa0390460:CDS | 40.0% |
| TTTGGGGGTAAGGAGAATTA+GGG | - | chr3_2:1376634-1376653 | Msa0390460:intron | 40.0% | |
| ! | TGTTAGGAAAATGGTGTTGG+AGG | - | chr3_2:1376672-1376691 | Msa0390460:intron | 40.0% |
| ! | GTTAGGAAAATGGTGTTGGA+GGG | - | chr3_2:1376673-1376692 | Msa0390460:intron | 40.0% |
| !! | AGGGTGTTGGAAGATATTCA+TGG | - | chr3_2:1376692-1376711 | Msa0390460:intron | 40.0% |
| CATAAATATCACGCCACCAT+AGG | + | chr3_2:1376793-1376812 | None:intergenic | 40.0% | |
| ! | TTTTGACCATGTGAGTCGTT+TGG | - | chr3_2:1376835-1376854 | Msa0390460:intron | 40.0% |
| ! | ATGGTAGGAATACCCTGTTT+TGG | - | chr3_2:1376864-1376883 | Msa0390460:intron | 40.0% |
| ! | TGGTAGGAATACCCTGTTTT+GGG | - | chr3_2:1376865-1376884 | Msa0390460:intron | 40.0% |
| TGTCTGATATGTTTCAGGGT+GGG | - | chr3_2:1376969-1376988 | Msa0390460:intron | 40.0% | |
| AGGTAGATAAGGATGACAGA+TGG | - | chr3_2:1377101-1377120 | Msa0390460:intron | 40.0% | |
| ATAAGGATGACAGATGGCTT+TGG | - | chr3_2:1377107-1377126 | Msa0390460:intron | 40.0% | |
| CGATGAAGATTGTCCTTAGT+AGG | + | chr3_2:1377292-1377311 | None:intergenic | 40.0% | |
| ATGGTCTGACACATAAAACG+GGG | + | chr3_2:1377458-1377477 | None:intergenic | 40.0% | |
| TTTCAGTGGTGGTATCTCAA+AGG | - | chr3_2:1377492-1377511 | Msa0390460:intron | 40.0% | |
| !! | CTATATGGTTTGTTACGGTG+TGG | - | chr3_2:1377536-1377555 | Msa0390460:intron | 40.0% |
| AGTATGCTCGATTATTCAGG+TGG | - | chr3_2:1377600-1377619 | Msa0390460:CDS | 40.0% | |
| TCTTGCTTATACGTGGTTGA+AGG | - | chr3_2:1377639-1377658 | Msa0390460:CDS | 40.0% | |
| TGCTGAGAAGTGGTGAAGAT+TGG | + | chr3_2:1374465-1374484 | None:intergenic | 45.0% | |
| GATTGAAGAGGAGAGTGATG+AGG | - | chr3_2:1374767-1374786 | Msa0390460:intron | 45.0% | |
| CCCAGTGAGCTTAACTTAGT+TGG | + | chr3_2:1375169-1375188 | None:intergenic | 45.0% | |
| ! | CGTTGTGGACTATCAACCTT+AGG | + | chr3_2:1375553-1375572 | None:intergenic | 45.0% |
| AAGCTACCCACCAACGAAAT+CGG | + | chr3_2:1375592-1375611 | None:intergenic | 45.0% | |
| ! | AGGTTGTTGATGAAGCTCGA+AGG | - | chr3_2:1375737-1375756 | Msa0390460:CDS | 45.0% |
| TCCCTACTCTTTGGCGAAAA+TGG | - | chr3_2:1375857-1375876 | Msa0390460:CDS | 45.0% | |
| CCCGTTAACCAATACTGAAG+CGG | + | chr3_2:1375908-1375927 | None:intergenic | 45.0% | |
| !! | CCGCTTCAGTATTGGTTAAC+GGG | - | chr3_2:1375905-1375924 | Msa0390460:CDS | 45.0% |
| CCCAAAGAGAACTCATCAGT+TGG | + | chr3_2:1375934-1375953 | None:intergenic | 45.0% | |
| ! | TTTGTTTCTCTTAGCGGCAG+AGG | - | chr3_2:1375990-1376009 | Msa0390460:CDS | 45.0% |
| ! | TTGTTTCTCTTAGCGGCAGA+GGG | - | chr3_2:1375991-1376010 | Msa0390460:CDS | 45.0% |
| GGTTGGAAACAGTGGTACTA+CGG | - | chr3_2:1376068-1376087 | Msa0390460:CDS | 45.0% | |
| GTTCGAATGTCACAACGTCT+TGG | - | chr3_2:1376235-1376254 | Msa0390460:CDS | 45.0% | |
| TTCCCAAAACGACAATCGAC+GGG | + | chr3_2:1376343-1376362 | None:intergenic | 45.0% | |
| GTTCCCAAAACGACAATCGA+CGG | + | chr3_2:1376344-1376363 | None:intergenic | 45.0% | |
| CATAAACAGGCAATGACGAC+AGG | + | chr3_2:1376455-1376474 | None:intergenic | 45.0% | |
| CGGAGTCTTGAAGAAGGAAA+GGG | + | chr3_2:1376478-1376497 | None:intergenic | 45.0% | |
| ACGGAGTCTTGAAGAAGGAA+AGG | + | chr3_2:1376479-1376498 | None:intergenic | 45.0% | |
| !!! | ACTGTTTTTTTTTGGGGGGG+GGG | - | chr3_2:1376532-1376551 | Msa0390460:CDS | 45.0% |
| TGTAGTAGTAAGGAGGTTGG+TGG | - | chr3_2:1376611-1376630 | Msa0390460:CDS | 45.0% | |
| !! | TAGTAAGGAGGTTGGTGGTT+TGG | - | chr3_2:1376616-1376635 | Msa0390460:CDS | 45.0% |
| !! | AGTAAGGAGGTTGGTGGTTT+GGG | - | chr3_2:1376617-1376636 | Msa0390460:intron | 45.0% |
| GTTTGGGGGTAAGGAGAATT+AGG | - | chr3_2:1376633-1376652 | Msa0390460:intron | 45.0% | |
| ! | AAAATGGTGTTGGAGGGTGT+TGG | - | chr3_2:1376679-1376698 | Msa0390460:intron | 45.0% |
| TCAGCTAGGTATGGAGTAGA+GGG | - | chr3_2:1376734-1376753 | Msa0390460:intron | 45.0% | |
| !! | TAGGAATACCCTGTTTTGGG+TGG | - | chr3_2:1376868-1376887 | Msa0390460:intron | 45.0% |
| !! | AATACCCTGTTTTGGGTGGA+TGG | - | chr3_2:1376872-1376891 | Msa0390460:intron | 45.0% |
| CGCTTAGTGTCAGATTTAGC+AGG | - | chr3_2:1376912-1376931 | Msa0390460:intron | 45.0% | |
| ! | TGATTTGTCGTTGGATTGGG+AGG | - | chr3_2:1376940-1376959 | Msa0390460:intron | 45.0% |
| GTGTCTGATATGTTTCAGGG+TGG | - | chr3_2:1376968-1376987 | Msa0390460:intron | 45.0% | |
| TGATATGTTTCAGGGTGGGT+GGG | - | chr3_2:1376973-1376992 | Msa0390460:intron | 45.0% | |
| !! | TGACAGATGGCTTTGGACTT+TGG | - | chr3_2:1377114-1377133 | Msa0390460:intron | 45.0% |
| TCAACCTCCGACTGAATTAC+CGG | - | chr3_2:1377186-1377205 | Msa0390460:intron | 45.0% | |
| ATAGCCACCGGTAATTCAGT+CGG | + | chr3_2:1377196-1377215 | None:intergenic | 45.0% | |
| CATAAAGGGGAAATAGCCAC+CGG | + | chr3_2:1377208-1377227 | None:intergenic | 45.0% | |
| ! | GCAAAGAGCACAACCTTCAA+AGG | + | chr3_2:1377244-1377263 | None:intergenic | 45.0% |
| TGAAGGTTGTGCTCTTTGCT+TGG | - | chr3_2:1377245-1377264 | Msa0390460:intron | 45.0% | |
| CCTTAGTAGGCAACCTATCA+AGG | + | chr3_2:1377279-1377298 | None:intergenic | 45.0% | |
| CCTTGATAGGTTGCCTACTA+AGG | - | chr3_2:1377276-1377295 | Msa0390460:intron | 45.0% | |
| AAGGACAATCTTCATCGTCG+TGG | - | chr3_2:1377295-1377314 | Msa0390460:CDS | 45.0% | |
| !! | AATAGGTGGATTGGCACATC+CGG | - | chr3_2:1377427-1377446 | Msa0390460:intron | 45.0% |
| TTGTTACGGTGTGGGAAATC+TGG | - | chr3_2:1377545-1377564 | Msa0390460:intron | 45.0% | |
| TCACTTCCCTTCAACTACCA+TGG | - | chr3_2:1377673-1377692 | Msa0390460:CDS | 45.0% | |
| CTTAGTCCGTTTGCCATCTT+GGG | - | chr3_2:1377703-1377722 | Msa0390460:CDS | 45.0% | |
| AAGTGGTGAAGATTGGAGCG+TGG | + | chr3_2:1374458-1374477 | None:intergenic | 50.0% | |
| CATTATACATGCAGAGGCCG+AGG | + | chr3_2:1375135-1375154 | None:intergenic | 50.0% | |
| CGGAAGTCATTCAGACGTTG+TGG | + | chr3_2:1375568-1375587 | None:intergenic | 50.0% | |
| TGACTTCCGTCCGATTTCGT+TGG | - | chr3_2:1375579-1375598 | Msa0390460:intron | 50.0% | |
| TTCCGTCCGATTTCGTTGGT+GGG | - | chr3_2:1375583-1375602 | Msa0390460:intron | 50.0% | |
| TACCCACCAACGAAATCGGA+CGG | + | chr3_2:1375588-1375607 | None:intergenic | 50.0% | |
| AACGGCTACCGCTTCAGTAT+TGG | - | chr3_2:1375897-1375916 | Msa0390460:CDS | 50.0% | |
| ! | GATGAGTTCTCTTTGGGGAG+AGG | - | chr3_2:1375937-1375956 | Msa0390460:CDS | 50.0% |
| ! | TCTCTTTGGGGAGAGGTTTG+AGG | - | chr3_2:1375944-1375963 | Msa0390460:CDS | 50.0% |
| TGTTTCTCTTAGCGGCAGAG+GGG | - | chr3_2:1375992-1376011 | Msa0390460:CDS | 50.0% | |
| AGAGGGGTTTCACGTGTTGA+TGG | - | chr3_2:1376008-1376027 | Msa0390460:CDS | 50.0% | |
| !! | GGTTATCGGGTTGGAAACAG+TGG | - | chr3_2:1376060-1376079 | Msa0390460:CDS | 50.0% |
| !! | ATGCCCGTCGATTGTCGTTT+TGG | - | chr3_2:1376337-1376356 | Msa0390460:CDS | 50.0% |
| !!! | TGCCCGTCGATTGTCGTTTT+GGG | - | chr3_2:1376338-1376357 | Msa0390460:CDS | 50.0% |
| TCCTTCTTCAAGACTCCGTC+AGG | - | chr3_2:1376480-1376499 | Msa0390460:CDS | 50.0% | |
| ACCTGACGGAGTCTTGAAGA+AGG | + | chr3_2:1376484-1376503 | None:intergenic | 50.0% | |
| !!! | CTGTTTTTTTTTGGGGGGGG+GGG | - | chr3_2:1376533-1376552 | Msa0390460:CDS | 50.0% |
| !!! | TGTTTTTTTTTGGGGGGGGG+GGG | - | chr3_2:1376534-1376553 | Msa0390460:CDS | 50.0% |
| !! | GTAAGGAGGTTGGTGGTTTG+GGG | - | chr3_2:1376618-1376637 | Msa0390460:intron | 50.0% |
| !! | TAAGGAGGTTGGTGGTTTGG+GGG | - | chr3_2:1376619-1376638 | Msa0390460:intron | 50.0% |
| !! | GGTATAGGGTGTTGTCAGCT+AGG | - | chr3_2:1376720-1376739 | Msa0390460:intron | 50.0% |
| !! | AGGGTGTTGTCAGCTAGGTA+TGG | - | chr3_2:1376725-1376744 | Msa0390460:intron | 50.0% |
| GTCAGCTAGGTATGGAGTAG+AGG | - | chr3_2:1376733-1376752 | Msa0390460:intron | 50.0% | |
| TGACCATGTGAGTCGTTTGG+TGG | - | chr3_2:1376838-1376857 | Msa0390460:intron | 50.0% | |
| GACCATGTGAGTCGTTTGGT+GGG | - | chr3_2:1376839-1376858 | Msa0390460:intron | 50.0% | |
| TACCCACCAAACGACTCACA+TGG | + | chr3_2:1376844-1376863 | None:intergenic | 50.0% | |
| ! | GTGAGTCGTTTGGTGGGTAA+TGG | - | chr3_2:1376845-1376864 | Msa0390460:intron | 50.0% |
| ! | GTCGTTTGGTGGGTAATGGT+AGG | - | chr3_2:1376849-1376868 | Msa0390460:intron | 50.0% |
| CTGATATGTTTCAGGGTGGG+TGG | - | chr3_2:1376972-1376991 | Msa0390460:intron | 50.0% | |
| GATATGTTTCAGGGTGGGTG+GGG | - | chr3_2:1376974-1376993 | Msa0390460:intron | 50.0% | |
| CAGTCGGAGGTTGAGAAGTA+AGG | + | chr3_2:1377180-1377199 | None:intergenic | 50.0% | |
| ! | CGGTGGCTATTTCCCCTTTA+TGG | - | chr3_2:1377206-1377225 | Msa0390460:intron | 50.0% |
| AGGTTGTGCTCTTTGCTTGG+CGG | - | chr3_2:1377248-1377267 | Msa0390460:intron | 50.0% | |
| CTTGGCGGTTGTTCCTTGAT+AGG | - | chr3_2:1377263-1377282 | Msa0390460:intron | 50.0% | |
| ACAGCCTGACACACACAACA+TGG | + | chr3_2:1377338-1377357 | None:intergenic | 50.0% | |
| ATGTTGTGTGTGTCAGGCTG+TGG | - | chr3_2:1377337-1377356 | Msa0390460:CDS | 50.0% | |
| TGTTGTGTGTGTCAGGCTGT+GGG | - | chr3_2:1377338-1377357 | Msa0390460:CDS | 50.0% | |
| !! | ATAGGTGGATTGGCACATCC+GGG | - | chr3_2:1377428-1377447 | Msa0390460:intron | 50.0% |
| TACGGTGTGGGAAATCTGGA+AGG | - | chr3_2:1377549-1377568 | Msa0390460:intron | 50.0% | |
| TTCCCTTCAACTACCATGGC+TGG | - | chr3_2:1377677-1377696 | Msa0390460:CDS | 50.0% | |
| CACCAGCCATGGTAGTTGAA+GGG | + | chr3_2:1377682-1377701 | None:intergenic | 50.0% | |
| GCTTAGTCCGTTTGCCATCT+TGG | - | chr3_2:1377702-1377721 | Msa0390460:CDS | 50.0% | |
| CCTATGCCCAAGATGGCAAA+CGG | + | chr3_2:1377712-1377731 | None:intergenic | 50.0% | |
| GTGAAGATTGGAGCGTGGAG+AGG | + | chr3_2:1374453-1374472 | None:intergenic | 55.0% | |
| ! | ATGTGGAGAAGTGGGGTGTC+CGG | - | chr3_2:1375101-1375120 | Msa0390460:CDS | 55.0% |
| CTTCCGTCCGATTTCGTTGG+TGG | - | chr3_2:1375582-1375601 | Msa0390460:intron | 55.0% | |
| ! | TTGGGGAGAGGTTTGAGGCA+AGG | - | chr3_2:1375949-1375968 | Msa0390460:CDS | 55.0% |
| GGGCTAATATCCGGGCTATG+CGG | - | chr3_2:1376145-1376164 | Msa0390460:CDS | 55.0% | |
| GGCTAATATCCGGGCTATGC+GGG | - | chr3_2:1376146-1376165 | Msa0390460:CDS | 55.0% | |
| CGACGGGCATTCCCACTAAT+AGG | + | chr3_2:1376327-1376346 | None:intergenic | 55.0% | |
| !!! | GTTTTTTTTTGGGGGGGGGG+GGG | - | chr3_2:1376535-1376554 | Msa0390460:CDS | 55.0% |
| !!! | TTTTTTTTTGGGGGGGGGGG+GGG | - | chr3_2:1376536-1376555 | Msa0390460:CDS | 55.0% |
| !! | AGGTTGGTGGTTTGGGGGTA+AGG | - | chr3_2:1376624-1376643 | Msa0390460:intron | 55.0% |
| GCTAGGTATGGAGTAGAGGG+AGG | - | chr3_2:1376737-1376756 | Msa0390460:intron | 55.0% | |
| GGTATGGAGTAGAGGGAGGT+CGG | - | chr3_2:1376741-1376760 | Msa0390460:intron | 55.0% | |
| AGTAGAGGGAGGTCGGTTAG+TGG | - | chr3_2:1376748-1376767 | Msa0390460:intron | 55.0% | |
| GTAGAGGGAGGTCGGTTAGT+GGG | - | chr3_2:1376749-1376768 | Msa0390460:intron | 55.0% | |
| TAGAGGGAGGTCGGTTAGTG+GGG | - | chr3_2:1376750-1376769 | Msa0390460:intron | 55.0% | |
| !! | GCCACCATAGGGAAGCATCT+CGG | + | chr3_2:1376781-1376800 | None:intergenic | 55.0% |
| CCAGCCATCCACCCAAAACA+GGG | + | chr3_2:1376879-1376898 | None:intergenic | 55.0% | |
| !! | TTTTGGGTGGATGGCTGGCT+TGG | - | chr3_2:1376881-1376900 | Msa0390460:intron | 55.0% |
| !! | TTGATGGTGAGGCGTGGAGA+TGG | - | chr3_2:1376999-1377018 | Msa0390460:intron | 55.0% |
| TGTGTGGGAGGAGGAGATGT+TGG | - | chr3_2:1377036-1377055 | Msa0390460:intron | 55.0% | |
| GTGTGGGAGGAGGAGATGTT+GGG | - | chr3_2:1377037-1377056 | Msa0390460:intron | 55.0% | |
| TGTGGGAGGAGGAGATGTTG+GGG | - | chr3_2:1377038-1377057 | Msa0390460:intron | 55.0% | |
| GAGGAGGAGATGTTGGGGTT+GGG | - | chr3_2:1377043-1377062 | Msa0390460:intron | 55.0% | |
| AGGAGGAGATGTTGGGGTTG+GGG | - | chr3_2:1377044-1377063 | Msa0390460:intron | 55.0% | |
| ACCTCCGACTGAATTACCGG+TGG | - | chr3_2:1377189-1377208 | Msa0390460:intron | 55.0% | |
| GCCTCCATGTTGTGTGTGTC+AGG | - | chr3_2:1377331-1377350 | Msa0390460:CDS | 55.0% | |
| GCCTGACACACACAACATGG+AGG | + | chr3_2:1377335-1377354 | None:intergenic | 55.0% | |
| !! | TAGGTGGATTGGCACATCCG+GGG | - | chr3_2:1377429-1377448 | Msa0390460:intron | 55.0% |
| GGTGCGCCGCTCAATTATTC+AGG | - | chr3_2:1377513-1377532 | Msa0390460:intron | 55.0% | |
| CCACCAGCCATGGTAGTTGA+AGG | + | chr3_2:1377683-1377702 | None:intergenic | 55.0% | |
| CCTTCAACTACCATGGCTGG+TGG | - | chr3_2:1377680-1377699 | Msa0390460:CDS | 55.0% | |
| CCGTTTGCCATCTTGGGCAT+AGG | - | chr3_2:1377709-1377728 | Msa0390460:CDS | 55.0% | |
| ! | TGTGGAGAAGTGGGGTGTCC+GGG | - | chr3_2:1375102-1375121 | Msa0390460:CDS | 60.0% |
| GAAGAGCAACCCGCATAGCC+CGG | + | chr3_2:1376158-1376177 | None:intergenic | 60.0% | |
| !!! | TTTTTTTTGGGGGGGGGGGG+GGG | - | chr3_2:1376537-1376556 | Msa0390460:CDS | 60.0% |
| GAGGCCGAGATGCTTCCCTA+TGG | - | chr3_2:1376774-1376793 | Msa0390460:intron | 60.0% | |
| GCCGAGATGCTTCCCTATGG+TGG | - | chr3_2:1376777-1376796 | Msa0390460:intron | 60.0% | |
| !! | CCCTGTTTTGGGTGGATGGC+TGG | - | chr3_2:1376876-1376895 | Msa0390460:intron | 60.0% |
| GCCAGCCATCCACCCAAAAC+AGG | + | chr3_2:1376880-1376899 | None:intergenic | 60.0% | |
| !! | TGGGTGGGGTGTTGATGGTG+AGG | - | chr3_2:1376988-1377007 | Msa0390460:intron | 60.0% |
| ATGGTGAGGCGTGGAGATGG+AGG | - | chr3_2:1377002-1377021 | Msa0390460:intron | 60.0% | |
| GAGGCGGAGGCTGTTTGTGT+GGG | - | chr3_2:1377021-1377040 | Msa0390460:intron | 60.0% | |
| GAGGCTGTTTGTGTGGGAGG+AGG | - | chr3_2:1377027-1377046 | Msa0390460:intron | 60.0% | |
| GGAGGAGGAGATGTTGGGGT+TGG | - | chr3_2:1377042-1377061 | Msa0390460:intron | 60.0% | |
| GGAGGAGATGTTGGGGTTGG+GGG | - | chr3_2:1377045-1377064 | Msa0390460:intron | 60.0% | |
| GCCACCGGTAATTCAGTCGG+AGG | + | chr3_2:1377193-1377212 | None:intergenic | 60.0% | |
| TGTGTCAGGCTGTGGGTCGA+CGG | - | chr3_2:1377345-1377364 | Msa0390460:CDS | 60.0% | |
| CACATAAAACGGGGCAGCCC+CGG | + | chr3_2:1377449-1377468 | None:intergenic | 60.0% | |
| ! | ACGGACTAAGCCACCAGCCA+TGG | + | chr3_2:1377693-1377712 | None:intergenic | 60.0% |
| ! | GTGGAGAAGTGGGGTGTCCG+GGG | - | chr3_2:1375103-1375122 | Msa0390460:CDS | 65.0% |
| GGTGTCCGGGGTTCGAACCT+CGG | - | chr3_2:1375115-1375134 | Msa0390460:CDS | 65.0% | |
| AGAGGCCGAGGTTCGAACCC+CGG | + | chr3_2:1375123-1375142 | None:intergenic | 65.0% | |
| !!! | TTTTTTTGGGGGGGGGGGGG+GGG | - | chr3_2:1376538-1376557 | Msa0390460:CDS | 65.0% |
| GGAGGTCGGTTAGTGGGGAG+AGG | - | chr3_2:1376755-1376774 | Msa0390460:intron | 65.0% | |
| !! | TGGGTGGATGGCTGGCTTGG+TGG | - | chr3_2:1376884-1376903 | Msa0390460:intron | 65.0% |
| !! | GGGTGGATGGCTGGCTTGGT+GGG | - | chr3_2:1376885-1376904 | Msa0390460:intron | 65.0% |
| !! | GGTGGATGGCTGGCTTGGTG+GGG | - | chr3_2:1376886-1376905 | Msa0390460:intron | 65.0% |
| !! | CAGGGTGGGTGGGGTGTTGA+TGG | - | chr3_2:1376983-1377002 | Msa0390460:intron | 65.0% |
| !! | GGGGTGTTGATGGTGAGGCG+TGG | - | chr3_2:1376993-1377012 | Msa0390460:intron | 65.0% |
| GTGAGGCGTGGAGATGGAGG+CGG | - | chr3_2:1377005-1377024 | Msa0390460:intron | 65.0% | |
| GGAGGCGGAGGCTGTTTGTG+TGG | - | chr3_2:1377020-1377039 | Msa0390460:intron | 65.0% | |
| GCGGAGGCTGTTTGTGTGGG+AGG | - | chr3_2:1377024-1377043 | Msa0390460:intron | 65.0% | |
| !!! | TTTTTTGGGGGGGGGGGGGG+GGG | - | chr3_2:1376539-1376558 | Msa0390460:CDS | 70.0% |
| !! | GGATGGCTGGCTTGGTGGGG+AGG | - | chr3_2:1376889-1376908 | Msa0390460:intron | 70.0% |
| AGGCGTGGAGATGGAGGCGG+AGG | - | chr3_2:1377008-1377027 | Msa0390460:intron | 70.0% | |
| !! | TTTTTGGGGGGGGGGGGGGG+GGG | - | chr3_2:1376540-1376559 | Msa0390460:CDS | 75.0% |
| !!! | TTTTGGGGGGGGGGGGGGGG+GGG | - | chr3_2:1376541-1376560 | Msa0390460:CDS | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | - | chr3_2:1376542-1376561 | Msa0390460:CDS | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr3_2:1376543-1376562 | Msa0390460:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 1374410 | 1377735 | 1374410 | ID=Msa0390460;Name=Msa0390460 |
| chr3_2 | mRNA | 1374410 | 1377735 | 1374410 | ID=Msa0390460-mRNA-1;Parent=Msa0390460;Name=Msa0390460-mRNA-1;_AED=0.57;_eAED=0.57;_QI=0|0|0|0.33|1|1|6|0|721 |
| chr3_2 | exon | 1377568 | 1377735 | 1377568 | ID=Msa0390460-mRNA-1:exon:404;Parent=Msa0390460-mRNA-1 |
| chr3_2 | exon | 1377295 | 1377443 | 1377295 | ID=Msa0390460-mRNA-1:exon:403;Parent=Msa0390460-mRNA-1 |
| chr3_2 | exon | 1375644 | 1376635 | 1375644 | ID=Msa0390460-mRNA-1:exon:402;Parent=Msa0390460-mRNA-1 |
| chr3_2 | exon | 1375383 | 1375467 | 1375383 | ID=Msa0390460-mRNA-1:exon:401;Parent=Msa0390460-mRNA-1 |
| chr3_2 | exon | 1374807 | 1375274 | 1374807 | ID=Msa0390460-mRNA-1:exon:400;Parent=Msa0390460-mRNA-1 |
| chr3_2 | exon | 1374410 | 1374713 | 1374410 | ID=Msa0390460-mRNA-1:exon:399;Parent=Msa0390460-mRNA-1 |
| chr3_2 | CDS | 1377568 | 1377735 | 1377568 | ID=Msa0390460-mRNA-1:cds;Parent=Msa0390460-mRNA-1 |
| chr3_2 | CDS | 1377295 | 1377443 | 1377295 | ID=Msa0390460-mRNA-1:cds;Parent=Msa0390460-mRNA-1 |
| chr3_2 | CDS | 1375644 | 1376635 | 1375644 | ID=Msa0390460-mRNA-1:cds;Parent=Msa0390460-mRNA-1 |
| chr3_2 | CDS | 1375383 | 1375467 | 1375383 | ID=Msa0390460-mRNA-1:cds;Parent=Msa0390460-mRNA-1 |
| chr3_2 | CDS | 1374807 | 1375274 | 1374807 | ID=Msa0390460-mRNA-1:cds;Parent=Msa0390460-mRNA-1 |
| chr3_2 | CDS | 1374410 | 1374713 | 1374410 | ID=Msa0390460-mRNA-1:cds;Parent=Msa0390460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
